Psyllid ID: psy2865

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-----
Protein Sequence
EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccccccccccccHHccccccccccccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHccccccccHHHHHcccccHHHHHHHHHHccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHccccccEEEEHHHcccccccccHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHccHcccccHHHHHHHHHHHHHHHHcccHHcccccccEEEEEcccccEEEcccccccEcccccccccccccccHHHccHHHHccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHccccccHHHHEHHccccccccccHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHcccccccccccccccccccccccccccccccccccEEEcccccccccccccccHcHccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccccHHHEEEcccccEEc
Coil and Loop (DISEMBL)
EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKeeeegeeeeegeEEGRRRRRRRRRRRKKEREKkrssrrkpfklseisatrpdstidgyqarqptRQLVMYQATYSSkicdfglarveepdpnkamtQEVVTQYYrapeilmgaRHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLItdllgtptpeemrhacdgakchmlrqtrksqslSSLYSLSSQATGEAVHLLVQMLyfdptkrisvnsalchpyldegrlrfhscmckccyttpsptspptlsipgggggrqytvdfepsapqpfddtwERKLTSVQQVKEEMHKFIAEQlntsrvplcinpqsAAFKSLKYLHSARIlhrdikpgnllvnsncilkw
Flexible Loop (DISEMBL)
ekkkekkkekkkekkkekkkkekkkkekkkkkekkkkeekkkekkkkeeeegeeeeegeeegrrrrrrrrrrrkkerekkrssrrkpfklseisatrpdstidgyqarQPTRQLVMYQATYSSKICDFGLARveepdpnkaMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSapqpfddtwERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILhrdikpgnllvnsncilkw
Low Complexity Region (SEG)
ekkkekkkekkkekkkekkkkekkkkekkkkkekkkkeekkkekkkkeeeegeeeeegeeegrrrrrrrrrrrkkerekkrSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKsqslsslyslssqATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYttpsptspptlsipgggggRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW
Disordered region (IsUnstruct)
***************************************************************************************************************RQLVMYQATYSSKICDFGLARVE*******MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTP********CD*AKC*********************ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYT**************************************************MHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCIL**
Disordered Region (DISOPRED)
********************************************************************************************ISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW
Disordered Region (DISEMBL)
*****************************************************************************************LSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ****************ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW
Disordered Region (DISPRO)
*****KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHS*****RDIKPGNLLVNSNCILKW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	395	2.2.26 [Sep-21-2011]
E1BMN8	534	Serine/threonine-protein	yes	N/A	0.582	0.430	0.688	2e-95
D3ZSZ3	527	Serine/threonine-protein	yes	N/A	0.582	0.436	0.688	2e-95
O54949	527	Serine/threonine-protein	yes	N/A	0.582	0.436	0.688	2e-95
Q9UBE8	527	Serine/threonine-protein	yes	N/A	0.582	0.436	0.688	2e-95
E2QWQ2	527	Serine/threonine-protein	yes	N/A	0.582	0.436	0.688	2e-95
Q8QGV6	447	Serine/threonine-protein	N/A	N/A	0.582	0.514	0.655	3e-90
B1H3E1	454	Serine/threonine-protein	no	N/A	0.582	0.506	0.655	4e-90
A8XSC1	657	Serine/threonine kinase N	N/A	N/A	0.587	0.353	0.536	7e-72
Q9U9Y8	634	Serine/threonine kinase N	no	N/A	0.587	0.365	0.524	2e-68
P42525	529	Extracellular signal-regu	yes	N/A	0.374	0.279	0.429	7e-32

>sp|E1BMN8|NLK_BOVIN Serine/threonine-protein kinase NLK OS=Bos taurus GN=NLK PE=3 SV=2

 Score =  350 bits (897), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/244 (68%), Positives = 192/244 (78%), Gaps = 14/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct: 286 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 345

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K  SL  LY+LSSQAT 
Sbjct: 346 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 405

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC++T +           
Sbjct: 406 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTST----------- 454

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
              GR YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct: 455 ---GRVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 511

Query: 364 FKSL 367
           FKS 
Sbjct: 512 FKSF 515

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 4

>sp|D3ZSZ3|NLK_RAT Serine/threonine-protein kinase NLK OS=Rattus norvegicus GN=Nlk PE=3 SV=1

 Score =  350 bits (897), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/244 (68%), Positives = 192/244 (78%), Gaps = 14/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct: 279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K  SL  LY+LSSQAT 
Sbjct: 339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC++T +           
Sbjct: 399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTST----------- 447

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
              GR YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct: 448 ---GRVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query: 364 FKSL 367
           FKS 
Sbjct: 505 FKSF 508

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|O54949|NLK_MOUSE Serine/threonine-protein kinase NLK OS=Mus musculus GN=Nlk PE=1 SV=2

 Score =  350 bits (897), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/244 (68%), Positives = 192/244 (78%), Gaps = 14/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct: 279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K  SL  LY+LSSQAT 
Sbjct: 339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC++T +           
Sbjct: 399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTST----------- 447

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
              GR YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct: 448 ---GRVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query: 364 FKSL 367
           FKS 
Sbjct: 505 FKSF 508

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q9UBE8|NLK_HUMAN Serine/threonine-protein kinase NLK OS=Homo sapiens GN=NLK PE=1 SV=2

 Score =  349 bits (896), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/244 (68%), Positives = 192/244 (78%), Gaps = 14/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct: 279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K  SL  LY+LSSQAT 
Sbjct: 339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC++T +           
Sbjct: 399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTST----------- 447

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
              GR YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct: 448 ---GRVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query: 364 FKSL 367
           FKS 
Sbjct: 505 FKSF 508

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|E2QWQ2|NLK_CANFA Serine/threonine-protein kinase NLK OS=Canis familiaris GN=NLK PE=3 SV=1

 Score =  349 bits (896), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 168/244 (68%), Positives = 192/244 (78%), Gaps = 14/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct: 279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K  SL  LY+LSSQAT 
Sbjct: 339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC++T +           
Sbjct: 399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTST----------- 447

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
              GR YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct: 448 ---GRVYTSDFEPITNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query: 364 FKSL 367
           FKS 
Sbjct: 505 FKSF 508

Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.

Canis familiaris (taxid: 9615)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q8QGV6|NLK2_XENLA Serine/threonine-protein kinase NLK2 OS=Xenopus laevis GN=nlk.2 PE=1 SV=1

 Score =  332 bits (851), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 160/244 (65%), Positives = 184/244 (75%), Gaps = 14/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHY +A+D+WSVGCIFAELLGRR
Sbjct: 201 KICDFGLARVEELDESQHMTQEVVTQYYRAPEILMGSRHYRSAIDIWSVGCIFAELLGRR 260

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSP+QQL LITDLLGTP    MR AC+GA+ H+LR   K  SLS LY LS +AT 
Sbjct: 261 ILFQAQSPIQQLDLITDLLGTPPLTAMRSACEGARAHILRGPHKPPSLSVLYMLSGEATH 320

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL +ML FDP KRIS   AL HPYL+EGRLR+H+CMC CCY+  S           
Sbjct: 321 EAVHLLCRMLLFDPLKRISAKDALAHPYLEEGRLRYHTCMCHCCYSVSS----------- 369

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
              GR YT DFEP+A   FDD++E+ LTSV QVKE +H+FI +Q    R PLCINP SAA
Sbjct: 370 ---GRVYTADFEPTATNRFDDSYEKSLTSVWQVKELVHRFITDQHQGKRPPLCINPHSAA 426

Query: 364 FKSL 367
           FK+ 
Sbjct: 427 FKTF 430

Negatively regulates Wnt/beta-catenin-signaling during development. Plays a role together with sox11 in neural induction during early embryogenesis. Involved in TGFbeta-mediated mesoderm induction in early embryos, acting downstream of map3k7/tak1 to phosphorylate stat3.1. Augments the rnf138/narf-directed ubiquitination and degradation of tcf/lef by enhancing the association of rnf138/narf and tcf/lef. Phosphorylates mef2a to play a role in anterior neural development, including eye formation.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|B1H3E1|NLK2_XENTR Serine/threonine-protein kinase NLK2 OS=Xenopus tropicalis GN=nlk.2 PE=2 SV=1

 Score =  332 bits (850), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 160/244 (65%), Positives = 184/244 (75%), Gaps = 14/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHY +A+D+WSVGCIFAELLGRR
Sbjct: 208 KICDFGLARVEELDESQHMTQEVVTQYYRAPEILMGSRHYRSAIDIWSVGCIFAELLGRR 267

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSP+QQL LITDLLGTP    MR AC+GA+ H+LR   K  SLS LY LS +AT 
Sbjct: 268 ILFQAQSPIQQLDLITDLLGTPPLTAMRSACEGARAHILRGPHKPPSLSVLYMLSGEATH 327

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL +ML FDP KRIS   AL HPYL+EGRLR+H+CMC CCY+  S           
Sbjct: 328 EAVHLLCRMLLFDPLKRISAKDALAHPYLEEGRLRYHTCMCHCCYSVSS----------- 376

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
              GR YT DFEP+A   FDD++E+ LTSV QVKE +H+FI +Q    R PLCINP SAA
Sbjct: 377 ---GRVYTADFEPTATNRFDDSYEKSLTSVWQVKELVHRFITDQQQGKRPPLCINPHSAA 433

Query: 364 FKSL 367
           FK+ 
Sbjct: 434 FKTF 437

Negatively regulates Wnt/beta-catenin-signaling during development. Plays a role together with sox11 in neural induction during early embryogenesis. Involved in TGFbeta-mediated mesoderm induction in early embryos, acting downstream of map3k7/tak1 to phosphorylate stat3. Augments the rnf138/narf-directed ubiquitination and degradation of tcf/lef by enhancing the association of rnf138/narf and tcf/lef. Phosphorylates mef2a to play a role in anterior neural development, including eye formation.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|A8XSC1|NLK_CAEBR Serine/threonine kinase NLK OS=Caenorhabditis briggsae GN=lit-1 PE=3 SV=2

 Score =  271 bits (693), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 132/246 (53%), Positives = 174/246 (70%), Gaps = 14/246 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLAR  +      MT EVVTQYYRAPE+LMGAR Y+ AVD+WSVGCIFAELL R+
Sbjct: 406 KICDFGLARTWDSRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRK 465

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQA  P++QL +I DLLGTP+ E M++AC+GAK H+LR   ++ +L SLY LS Q T 
Sbjct: 466 ILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGPRAPNLQSLYRLSQQTTD 525

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           +AV LLV++L F+P +RISV  AL HPYL+EGRLRFHSCMC CCYT  +  S        
Sbjct: 526 DAVDLLVKLLKFNPDERISVEEALSHPYLEEGRLRFHSCMCSCCYTKANVPS-------- 577

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLT--SVQQVKEEMHKFIAEQLNTSRVPLCINPQS 361
               R ++ + +P    PFD  WE+ ++  S+ +++E+M++F+ ++     V LCINPQS
Sbjct: 578 ----RIFSQELDPKHESPFDPKWEKDMSRLSMFELREKMYQFVMDRPALYGVALCINPQS 633

Query: 362 AAFKSL 367
           AA+K+ 
Sbjct: 634 AAYKNF 639

Has a role in the Wnt signaling pathway controlling the asymmetry of cell divisions during embryogenesis. Operates in the AB and EMS cell lineages influencing cell specification. Required for body wall muscle development, endoderm development, pop-1 asymmetry and T-cell division asymmetry. Lit-1/wrm-1 complex regulates pop-1 localization and is required for pop-1/par-5 interaction.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q9U9Y8|NLK_CAEEL Serine/threonine kinase NLK OS=Caenorhabditis elegans GN=lit-1 PE=1 SV=1

 Score =  260 bits (664), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/248 (52%), Positives = 169/248 (68%), Gaps = 16/248 (6%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLAR  +      MT EVVTQYYRAPE+LMGAR Y+ AVD+WSVGCIFAELL R+
Sbjct: 381 KICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRK 440

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS--QA 241
           ILFQA  P++QL +I DLLGTP+ E M++AC+GAK H+LR   ++     LY ++S    
Sbjct: 441 ILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDK 500

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSI 301
             EAV LL ++L+FDP KRISV  AL H YL+EGRLRFHSCMC CCYT P+  S      
Sbjct: 501 NHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRFHSCMCSCCYTKPNMPS------ 554

Query: 302 PGGGGGRQYTVDFEPSAPQPFDDTWERKLT--SVQQVKEEMHKFIAEQLNTSRVPLCINP 359
                 R +  D +P    PFD  WE+ ++  S+ +++E+M++F+ ++     V LCINP
Sbjct: 555 ------RLFAQDLDPRHESPFDPKWEKDMSRLSMFELREKMYQFVMDRPALYGVALCINP 608

Query: 360 QSAAFKSL 367
           QSAA+K+ 
Sbjct: 609 QSAAYKNF 616

Has a role in the Wnt signaling pathway controlling the asymmetry of cell divisions during embryogenesis. Operates in the AB and EMS cell lineages influencing cell specification. Required for body wall muscle development, endoderm development, pop-1 asymmetry and T-cell division asymmetry. Lit-1/wrm-1 complex regulates pop-1 localization and is required for pop-1/par-5 interaction.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

>sp|P42525|ERK1_DICDI Extracellular signal-regulated kinase 1 OS=Dictyostelium discoideum GN=erkA PE=2 SV=2

 Score =  138 bits (348), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 98/149 (65%), Gaps = 1/149 (0%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICD GLARVE+      MT+ V T++YRAPE+++    Y+ A+D+WSVGCIFAELLGR+
Sbjct: 290 KICDLGLARVEDATHQGFMTEYVATRWYRAPEVILSWNKYTKAIDIWSVGCIFAELLGRK 349

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LFQ +  + Q+ LI + +G+P+ E++ +  +      +R    +Q   +  ++  +A  
Sbjct: 350 PLFQGKDYIHQITLIIETIGSPSEEDICNIANEQARQFIRNM-GNQPKVNFANMFPKANP 408

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           +A+ LL +MLYFDP+KR++V  AL HPY 
Sbjct: 409 DAIDLLERMLYFDPSKRLTVEEALAHPYF 437

Kinase involved in a signal transduction pathway.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	395
157107527	417	serine/threonine kinase NLK [Aedes aegyp	0.584	0.553	0.790	1e-109
157131932	320	serine/threonine kinase NLK [Aedes aegyp	0.584	0.721	0.790	1e-108
194751109	513	GF23805 [Drosophila ananassae] gi|190625	0.584	0.450	0.782	1e-108
195016958	546	GH14986 [Drosophila grimshawi] gi|193897	0.584	0.423	0.782	1e-108
195126687	556	GI13148 [Drosophila mojavensis] gi|19391	0.584	0.415	0.782	1e-108
195379084	519	GJ13897 [Drosophila virilis] gi|19415546	0.584	0.445	0.782	1e-108
532559	434	putative serine/threonine protein kinase	0.584	0.532	0.782	1e-108
24660567	414	nemo, isoform A [Drosophila melanogaster	0.584	0.557	0.782	1e-108
24660555	430	nemo, isoform E [Drosophila melanogaster	0.584	0.537	0.782	1e-108
532558	477	putative serine/threonine protein kinase	0.584	0.484	0.782	1e-108

>gi|157107527|ref|XP_001649822.1| serine/threonine kinase NLK [Aedes aegypti] gi|108879565|gb|EAT43790.1| AAEL004797-PA [Aedes aegypti]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/244 (79%), Positives = 206/244 (84%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD +K MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIF ELLGRR
Sbjct: 134 KICDFGLARVEEPDQSKHMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFGELLGRR 193

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSPVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  SLS+LY+LS+ AT 
Sbjct: 194 ILFQAQSPVQQLELITELLGTPTLEDMRHACEGARTHMLRRAPKPPSLSALYTLSTHATH 253

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPY+DEGRLR+HSCMCKCCY TPS           
Sbjct: 254 EAVHLLCQMLVFDPDKRISVIDALAHPYVDEGRLRYHSCMCKCCY-TPS----------- 301

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQY  +FEPSAPQPFDD WERKLTSVQQVKEEMHKFIAEQL T+RVPLCINPQSAA
Sbjct: 302 -AGMRQYAAEFEPSAPQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTNRVPLCINPQSAA 360

Query: 364 FKSL 367
           FKS 
Sbjct: 361 FKSF 364

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157131932|ref|XP_001662367.1| serine/threonine kinase NLK [Aedes aegypti] gi|108871332|gb|EAT35557.1| AAEL012269-PA, partial [Aedes aegypti]

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/244 (79%), Positives = 206/244 (84%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD +K MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIF ELLGRR
Sbjct: 71  KICDFGLARVEEPDQSKHMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFGELLGRR 130

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSPVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  SLS+LY+LS+ AT 
Sbjct: 131 ILFQAQSPVQQLELITELLGTPTLEDMRHACEGARTHMLRRAPKPPSLSALYTLSTHATH 190

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPY+DEGRLR+HSCMCKCCY TPS           
Sbjct: 191 EAVHLLCQMLVFDPDKRISVIDALAHPYVDEGRLRYHSCMCKCCY-TPS----------- 238

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQY  +FEPSAPQPFDD WERKLTSVQQVKEEMHKFIAEQL T+RVPLCINPQSAA
Sbjct: 239 -AGMRQYAAEFEPSAPQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTNRVPLCINPQSAA 297

Query: 364 FKSL 367
           FKS 
Sbjct: 298 FKSF 301

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194751109|ref|XP_001957869.1| GF23805 [Drosophila ananassae] gi|190625151|gb|EDV40675.1| GF23805 [Drosophila ananassae]

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 201/244 (82%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct: 264 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 323

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  S S LY+LSS AT 
Sbjct: 324 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 383

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+TT             
Sbjct: 384 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTT------------- 430

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct: 431 SAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 490

Query: 364 FKSL 367
           FKS 
Sbjct: 491 FKSF 494

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195016958|ref|XP_001984509.1| GH14986 [Drosophila grimshawi] gi|193897991|gb|EDV96857.1| GH14986 [Drosophila grimshawi]

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 201/244 (82%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct: 297 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 356

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  S S LY+LSS AT 
Sbjct: 357 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 416

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+TT             
Sbjct: 417 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTT------------- 463

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct: 464 SAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 523

Query: 364 FKSL 367
           FKS 
Sbjct: 524 FKSF 527

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195126687|ref|XP_002007802.1| GI13148 [Drosophila mojavensis] gi|193919411|gb|EDW18278.1| GI13148 [Drosophila mojavensis]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 201/244 (82%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct: 307 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 366

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  S S LY+LSS AT 
Sbjct: 367 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 426

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+TT             
Sbjct: 427 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTT------------- 473

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct: 474 SAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 533

Query: 364 FKSL 367
           FKS 
Sbjct: 534 FKSF 537

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195379084|ref|XP_002048311.1| GJ13897 [Drosophila virilis] gi|194155469|gb|EDW70653.1| GJ13897 [Drosophila virilis]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 201/244 (82%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct: 270 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 329

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  S S LY+LSS AT 
Sbjct: 330 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 389

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+TT             
Sbjct: 390 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTT------------- 436

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct: 437 SAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 496

Query: 364 FKSL 367
           FKS 
Sbjct: 497 FKSF 500

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|532559|gb|AAA21125.1| putative serine/threonine protein kinase [Drosophila melanogaster]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 201/244 (82%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct: 181 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 240

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  S S LY+LSS AT 
Sbjct: 241 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 300

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+TT             
Sbjct: 301 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTT------------- 347

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct: 348 SAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 407

Query: 364 FKSL 367
           FKS 
Sbjct: 408 FKSF 411

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24660567|ref|NP_729319.1| nemo, isoform A [Drosophila melanogaster] gi|24660571|ref|NP_729320.1| nemo, isoform B [Drosophila melanogaster] gi|24660575|ref|NP_523967.2| nemo, isoform C [Drosophila melanogaster] gi|17862540|gb|AAL39747.1| LD36031p [Drosophila melanogaster] gi|23093972|gb|AAF50497.2| nemo, isoform A [Drosophila melanogaster] gi|23093973|gb|AAN12038.1| nemo, isoform B [Drosophila melanogaster] gi|23093974|gb|AAN12039.1| nemo, isoform C [Drosophila melanogaster] gi|220947238|gb|ACL86162.1| CG7892-PB [synthetic construct] gi|220956784|gb|ACL90935.1| nmo-PA [synthetic construct]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 201/244 (82%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct: 181 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 240

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  S S LY+LSS AT 
Sbjct: 241 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 300

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+TT             
Sbjct: 301 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTT------------- 347

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct: 348 SAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 407

Query: 364 FKSL 367
           FKS 
Sbjct: 408 FKSF 411

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24660555|ref|NP_729316.1| nemo, isoform E [Drosophila melanogaster] gi|24660559|ref|NP_729317.1| nemo, isoform F [Drosophila melanogaster] gi|24660563|ref|NP_729318.1| nemo, isoform G [Drosophila melanogaster] gi|442630911|ref|NP_001261555.1| nemo, isoform H [Drosophila melanogaster] gi|195325861|ref|XP_002029649.1| GM25010 [Drosophila sechellia] gi|195492714|ref|XP_002094109.1| GE21651 [Drosophila yakuba] gi|195588595|ref|XP_002084043.1| GD14046 [Drosophila simulans] gi|23093969|gb|AAN12035.1| nemo, isoform E [Drosophila melanogaster] gi|23093970|gb|AAN12036.1| nemo, isoform F [Drosophila melanogaster] gi|23093971|gb|AAN12037.1| nemo, isoform G [Drosophila melanogaster] gi|194118592|gb|EDW40635.1| GM25010 [Drosophila sechellia] gi|194180210|gb|EDW93821.1| GE21651 [Drosophila yakuba] gi|194196052|gb|EDX09628.1| GD14046 [Drosophila simulans] gi|440215462|gb|AGB94250.1| nemo, isoform H [Drosophila melanogaster]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 201/244 (82%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct: 181 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 240

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  S S LY+LSS AT 
Sbjct: 241 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 300

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+TT             
Sbjct: 301 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTT------------- 347

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct: 348 SAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 407

Query: 364 FKSL 367
           FKS 
Sbjct: 408 FKSF 411

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|532558|gb|AAA21124.1| putative serine/threonine protein kinase [Drosophila melanogaster]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/244 (78%), Positives = 201/244 (82%), Gaps = 13/244 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct: 181 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 240

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K  S S LY+LSS AT 
Sbjct: 241 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 300

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+TT             
Sbjct: 301 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTT------------- 347

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             G RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct: 348 SAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 407

Query: 364 FKSL 367
           FKS 
Sbjct: 408 FKSF 411

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	395
FB|FBgn0011817	477	nmo "nemo" [Drosophila melanog	0.582	0.482	0.744	8.1e-92
UNIPROTKB|F1N862	462	NLK "Uncharacterized protein"	0.579	0.495	0.650	1.1e-78
UNIPROTKB|E1BMN8	534	NLK "Serine/threonine-protein	0.579	0.428	0.650	1.1e-78
UNIPROTKB|H2XJE9	527	NLK "Serine/threonine-protein	0.579	0.434	0.650	1.1e-78
UNIPROTKB|E2QWQ2	527	NLK "Serine/threonine-protein	0.579	0.434	0.650	1.1e-78
UNIPROTKB|H0YD75	475	NLK "Serine/threonine-protein	0.579	0.482	0.650	1.1e-78
UNIPROTKB|Q9UBE8	527	NLK "Serine/threonine-protein	0.579	0.434	0.650	1.1e-78
UNIPROTKB|I3LCS8	359	LOC100620270 "Uncharacterized	0.579	0.637	0.650	1.1e-78
MGI|MGI:1201387	527	Nlk "nemo like kinase" [Mus mu	0.579	0.434	0.650	1.1e-78
RGD|1561602	527	Nlk "nemo like kinase" [Rattus	0.579	0.434	0.650	1.1e-78

FB|FBgn0011817 nmo "nemo" [Drosophila melanogaster (taxid:7227)]

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 181/243 (74%), Positives = 190/243 (78%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEEPD  K MTQEVVTQYYRAPEILMGARHYS+AVDVWSVGCIF ELLGRR
Sbjct:   181 KICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRR 240

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQ+PVQQL LIT+LLGTPT E+MRHAC+GA+ HMLR+  K             AT 
Sbjct:   241 ILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATH 300

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL QML FDP KRISV  AL HPYLDEGRLR+HSCMCKCC+               
Sbjct:   301 EAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGM--------- 351

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 RQYT DFEPSA QPFDD WERKLTSVQQVKEEMHKFIAEQL T RVPLCINPQSAA
Sbjct:   352 ----RQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAA 407

Query:   364 FKS 366
             FKS
Sbjct:   408 FKS 410

GO:0048749 "compound eye development" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0016318 "ommatidial rotation" evidence=IGI;IMP

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP

GO:0042332 "gravitaxis" evidence=IMP

GO:0001736 "establishment of planar polarity" evidence=TAS

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IGI

GO:0004672 "protein kinase activity" evidence=IDA

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP

GO:0045887 "positive regulation of synaptic growth at neuromuscular junction" evidence=IMP

UNIPROTKB|F1N862 NLK "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   214 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 273

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   274 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 333

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   334 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 383

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   384 ----RVYTSDFEPITNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 439

Query:   364 FKS 366
             FKS
Sbjct:   440 FKS 442

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

UNIPROTKB|E1BMN8 NLK "Serine/threonine-protein kinase NLK" [Bos taurus (taxid:9913)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   286 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 345

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   346 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 405

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   406 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 455

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   456 ----RVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 511

Query:   364 FKS 366
             FKS
Sbjct:   512 FKS 514

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|H2XJE9 NLK "Serine/threonine-protein kinase NLK" [Bos taurus (taxid:9913)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 448

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   449 ----RVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query:   364 FKS 366
             FKS
Sbjct:   505 FKS 507

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|E2QWQ2 NLK "Serine/threonine-protein kinase NLK" [Canis lupus familiaris (taxid:9615)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 448

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   449 ----RVYTSDFEPITNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query:   364 FKS 366
             FKS
Sbjct:   505 FKS 507

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|H0YD75 NLK "Serine/threonine-protein kinase NLK" [Homo sapiens (taxid:9606)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   227 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 286

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   287 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 346

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   347 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 396

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   397 ----RVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 452

Query:   364 FKS 366
             FKS
Sbjct:   453 FKS 455

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

UNIPROTKB|Q9UBE8 NLK "Serine/threonine-protein kinase NLK" [Homo sapiens (taxid:9606)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 448

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   449 ----RVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query:   364 FKS 366
             FKS
Sbjct:   505 FKS 507

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=ISS

GO:0004707 "MAP kinase activity" evidence=ISS

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IMP

GO:0008134 "transcription factor binding" evidence=IPI

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0042169 "SH2 domain binding" evidence=ISS

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISS

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=ISS

GO:0004672 "protein kinase activity" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

UNIPROTKB|I3LCS8 LOC100620270 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   111 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 170

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   171 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 230

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   231 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 280

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   281 ----RVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 336

Query:   364 FKS 366
             FKS
Sbjct:   337 FKS 339

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0042169 "SH2 domain binding" evidence=IEA

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004707 "MAP kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

MGI|MGI:1201387 Nlk "nemo like kinase" [Mus musculus (taxid:10090)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 448

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   449 ----RVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query:   364 FKS 366
             FKS
Sbjct:   505 FKS 507

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004707 "MAP kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISO

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0008134 "transcription factor binding" evidence=ISO

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0023014 "signal transduction by phosphorylation" evidence=IDA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IMP

GO:0031625 "ubiquitin protein ligase binding" evidence=ISO

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IDA

GO:0042169 "SH2 domain binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1561602 Nlk "nemo like kinase" [Rattus norvegicus (taxid:10116)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 158/243 (65%), Positives = 179/243 (73%)

Query:   124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
             KICDFGLARVEE D ++ MTQEVVTQYYRAPEILMG+RHYS A+D+WSVGCIFAELLGRR
Sbjct:   279 KICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRR 338

Query:   184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             ILFQAQSP+QQL LITDLLGTP+ E MR AC+GAK H+LR   K             AT 
Sbjct:   339 ILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATH 398

Query:   244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXXX 303
             EAVHLL +ML FDP+KRIS   AL HPYLDEGRLR+H+CMCKCC+               
Sbjct:   399 EAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTG---------- 448

Query:   304 XXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
                 R YT DFEP     FDDT+E+ L+SV+QVKE +H+FI EQ   +RVPLCINPQSAA
Sbjct:   449 ----RVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAA 504

Query:   364 FKS 366
             FKS
Sbjct:   505 FKS 507

GO:0000287 "magnesium ion binding" evidence=IEA;ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004707 "MAP kinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=IEA;ISO

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

GO:0008134 "transcription factor binding" evidence=IEA;ISO

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA;ISO

GO:0023014 "signal transduction by phosphorylation" evidence=ISO

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA;ISO

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO

GO:0033136 "serine phosphorylation of STAT3 protein" evidence=IEA;ISO

GO:0042169 "SH2 domain binding" evidence=IEA;ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9UBE8	NLK_HUMAN	2, ., 7, ., 1, 1, ., 2, 4	0.6885	0.5822	0.4364	yes	N/A
O54949	NLK_MOUSE	2, ., 7, ., 1, 1, ., 2, 4	0.6885	0.5822	0.4364	yes	N/A
D3ZSZ3	NLK_RAT	2, ., 7, ., 1, 1, ., 2, 4	0.6885	0.5822	0.4364	yes	N/A
E2QWQ2	NLK_CANFA	2, ., 7, ., 1, 1, ., 2, 4	0.6885	0.5822	0.4364	yes	N/A
E1BMN8	NLK_BOVIN	2, ., 7, ., 1, 1, ., 2, 4	0.6885	0.5822	0.4307	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	395
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-144
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-64
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-47
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	7e-47
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-45
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-44
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-42
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-41
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-40
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-40
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-40
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	4e-39
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-38
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-38
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-37
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-37
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-37
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-36
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-34
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-33
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-33
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	9e-33
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-32
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-31
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-31
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-31
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-31
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-30
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	8e-30
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	8e-30
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-29
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-28
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-28
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-28
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	9e-27
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-26
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	6e-26
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	9e-26
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	9e-26
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-25
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-25
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-23
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-23
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	9e-23
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-22
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-22
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-22
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-22
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-21
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-21
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	6e-21
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	9e-21
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	7e-20
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-19
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	7e-19
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-17
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	7e-17
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	9e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-14
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-13
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-12
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	7e-12
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-11
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	2e-11
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	2e-11
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-11
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-10
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-10
pfam10243	506	pfam10243, MIP-T3, Microtubule-binding protein MIP	1e-10
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	2e-10
pfam10243	506	pfam10243, MIP-T3, Microtubule-binding protein MIP	2e-10
pfam10243	506	pfam10243, MIP-T3, Microtubule-binding protein MIP	4e-10
pfam08597	242	pfam08597, eIF3_subunit, Translation initiation fa	4e-10
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	6e-10
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	6e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-10
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	7e-10
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	8e-10
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	8e-10
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	9e-10
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	9e-10
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	9e-10
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-09
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	2e-09
pfam10243	506	pfam10243, MIP-T3, Microtubule-binding protein MIP	2e-09
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	3e-09
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-09
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-09
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-09
pfam10243	506	pfam10243, MIP-T3, Microtubule-binding protein MIP	9e-09
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-08
PRK11192	434	PRK11192, PRK11192, ATP-dependent RNA helicase Srm	2e-08
pfam08432	182	pfam08432, DUF1742, Fungal protein of unknown func	2e-08
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-08
pfam08597	242	pfam08597, eIF3_subunit, Translation initiation fa	3e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-08
pfam08432	182	pfam08432, DUF1742, Fungal protein of unknown func	3e-08
PRK11192	434	PRK11192, PRK11192, ATP-dependent RNA helicase Srm	4e-08
pfam09756	189	pfam09756, DDRGK, DDRGK domain	4e-08
PRK05306	746	PRK05306, infB, translation initiation factor IF-2	4e-08
pfam08597	242	pfam08597, eIF3_subunit, Translation initiation fa	5e-08
PRK11192	434	PRK11192, PRK11192, ATP-dependent RNA helicase Srm	5e-08
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	6e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-08
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	7e-08
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	8e-08
pfam10243	506	pfam10243, MIP-T3, Microtubule-binding protein MIP	9e-08
PRK05306	746	PRK05306, infB, translation initiation factor IF-2	9e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-07
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-07
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	1e-07
pfam08597	242	pfam08597, eIF3_subunit, Translation initiation fa	1e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-07
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-07
pfam08208	193	pfam08208, RNA_polI_A34, DNA-directed RNA polymera	2e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-07
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-07
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	4e-07
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	4e-07
pfam08208	193	pfam08208, RNA_polI_A34, DNA-directed RNA polymera	4e-07
pfam08208	193	pfam08208, RNA_polI_A34, DNA-directed RNA polymera	4e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-07
TIGR01554	384	TIGR01554, major_cap_HK97, phage major capsid prot	4e-07
pfam06658	142	pfam06658, DUF1168, Protein of unknown function (D	4e-07
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	5e-07
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	5e-07
pfam10243	506	pfam10243, MIP-T3, Microtubule-binding protein MIP	5e-07
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	5e-07
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	7e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	8e-07
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	8e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	9e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	9e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	9e-07
pfam12569	516	pfam12569, NARP1, NMDA receptor-regulated protein	9e-07
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-06
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	1e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-06
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	1e-06
pfam07767	387	pfam07767, Nop53, Nop53 (60S ribosomal biogenesis)	1e-06
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-06
pfam08208	193	pfam08208, RNA_polI_A34, DNA-directed RNA polymera	2e-06
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	2e-06
PRK14521	186	PRK14521, rpsP, 30S ribosomal protein S16; Provisi	2e-06
PRK12704	520	PRK12704, PRK12704, phosphodiesterase; Provisional	2e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-06
pfam12569	516	pfam12569, NARP1, NMDA receptor-regulated protein	3e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-06
PTZ00372	413	PTZ00372, PTZ00372, endonuclease 4-like protein; P	3e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	4e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	4e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	4e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	4e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	4e-06
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	4e-06
pfam07946	322	pfam07946, DUF1682, Protein of unknown function (D	4e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	5e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	5e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	5e-06
PRK14552	414	PRK14552, PRK14552, C/D box methylation guide ribo	5e-06
TIGR02794	346	TIGR02794, tolA_full, TolA protein	5e-06
TIGR02794	346	TIGR02794, tolA_full, TolA protein	5e-06
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	6e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	6e-06
pfam14265	125	pfam14265, DUF4355, Domain of unknown function (DU	6e-06
pfam08432	182	pfam08432, DUF1742, Fungal protein of unknown func	7e-06
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	7e-06
COG4499	434	COG4499, COG4499, Predicted membrane protein [Func	7e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	8e-06
pfam14265	125	pfam14265, DUF4355, Domain of unknown function (DU	8e-06
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	8e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	9e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	9e-06
PRK05306	746	PRK05306, infB, translation initiation factor IF-2	9e-06
pfam05764	238	pfam05764, YL1, YL1 nuclear protein	9e-06
pfam05764	238	pfam05764, YL1, YL1 nuclear protein	9e-06
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	9e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-05
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-05
PRK11192	434	PRK11192, PRK11192, ATP-dependent RNA helicase Srm	1e-05
pfam07946	322	pfam07946, DUF1682, Protein of unknown function (D	1e-05
pfam14265	125	pfam14265, DUF4355, Domain of unknown function (DU	1e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-05
PLN02381	1066	PLN02381, PLN02381, valyl-tRNA synthetase	1e-05
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-05
pfam10243	506	pfam10243, MIP-T3, Microtubule-binding protein MIP	2e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-05
pfam08208	193	pfam08208, RNA_polI_A34, DNA-directed RNA polymera	2e-05
pfam06658	142	pfam06658, DUF1168, Protein of unknown function (D	2e-05
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	2e-05
pfam12569	516	pfam12569, NARP1, NMDA receptor-regulated protein	2e-05
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	2e-05
PTZ00399	651	PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Pro	2e-05
smart00435	391	smart00435, TOPEUc, DNA Topoisomerase I (eukaryota	2e-05
pfam06658	142	pfam06658, DUF1168, Protein of unknown function (D	3e-05
PTZ00372	413	PTZ00372, PTZ00372, endonuclease 4-like protein; P	3e-05
PTZ00372	413	PTZ00372, PTZ00372, endonuclease 4-like protein; P	3e-05
PRK14552	414	PRK14552, PRK14552, C/D box methylation guide ribo	3e-05
TIGR02794	346	TIGR02794, tolA_full, TolA protein	3e-05
pfam08496	154	pfam08496, Peptidase_S49_N, Peptidase family S49 N	3e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-05
pfam04615	728	pfam04615, Utp14, Utp14 protein	3e-05
pfam05890	270	pfam05890, Ebp2, Eukaryotic rRNA processing protei	3e-05
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	4e-05
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	4e-05
TIGR02794	346	TIGR02794, tolA_full, TolA protein	4e-05
PTZ00399	651	PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Pro	4e-05
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-05
PTZ00372	413	PTZ00372, PTZ00372, endonuclease 4-like protein; P	5e-05
PTZ00372	413	PTZ00372, PTZ00372, endonuclease 4-like protein; P	5e-05
pfam07946	322	pfam07946, DUF1682, Protein of unknown function (D	5e-05
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	5e-05
PRK04950	213	PRK04950, PRK04950, ProP expression regulator; Pro	5e-05
COG4942	420	COG4942, COG4942, Membrane-bound metallopeptidase	5e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	5e-05
pfam11861	154	pfam11861, DUF3381, Domain of unknown function (DU	5e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	5e-05
pfam00183	529	pfam00183, HSP90, Hsp90 protein	5e-05
PRK14521	186	PRK14521, rpsP, 30S ribosomal protein S16; Provisi	6e-05
pfam08496	154	pfam08496, Peptidase_S49_N, Peptidase family S49 N	6e-05
COG1293	564	COG1293, COG1293, Predicted RNA-binding protein ho	6e-05
COG0810	244	COG0810, TonB, Periplasmic protein TonB, links inn	6e-05
PRK05306	746	PRK05306, infB, translation initiation factor IF-2	7e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-05
pfam07946	322	pfam07946, DUF1682, Protein of unknown function (D	7e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	7e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	7e-05
PRK00247	429	PRK00247, PRK00247, putative inner membrane protei	7e-05
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	8e-05
PRK12280	158	PRK12280, rplW, 50S ribosomal protein L23; Reviewe	8e-05
PRK12280	158	PRK12280, rplW, 50S ribosomal protein L23; Reviewe	8e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	8e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-04
pfam09756	189	pfam09756, DDRGK, DDRGK domain	1e-04
PRK05306	746	PRK05306, infB, translation initiation factor IF-2	1e-04
PRK05306	746	PRK05306, infB, translation initiation factor IF-2	1e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-04
PRK14552	414	PRK14552, PRK14552, C/D box methylation guide ribo	1e-04
TIGR02794	346	TIGR02794, tolA_full, TolA protein	1e-04
TIGR02794	346	TIGR02794, tolA_full, TolA protein	1e-04
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	1e-04
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	1e-04
pfam08496	154	pfam08496, Peptidase_S49_N, Peptidase family S49 N	1e-04
COG4942	420	COG4942, COG4942, Membrane-bound metallopeptidase	1e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-04
pfam11705	221	pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polym	1e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-04
PLN03237	1465	PLN03237, PLN03237, DNA topoisomerase 2; Provision	1e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-04
TIGR01642	509	TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, la	1e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-04
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-04
pfam06658	142	pfam06658, DUF1168, Protein of unknown function (D	2e-04
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	2e-04
pfam12569	516	pfam12569, NARP1, NMDA receptor-regulated protein	2e-04
PRK12704	520	PRK12704, PRK12704, phosphodiesterase; Provisional	2e-04
COG4499	434	COG4499, COG4499, Predicted membrane protein [Func	2e-04
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	2e-04
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	2e-04
PLN02381	1066	PLN02381, PLN02381, valyl-tRNA synthetase	2e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-04
PRK04950	213	PRK04950, PRK04950, ProP expression regulator; Pro	2e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-04
pfam09073	424	pfam09073, BUD22, BUD22	2e-04
pfam09073	424	pfam09073, BUD22, BUD22	2e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-04
pfam09736	141	pfam09736, Bud13, Pre-mRNA-splicing factor of RES	2e-04
pfam09736	141	pfam09736, Bud13, Pre-mRNA-splicing factor of RES	2e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-04
PTZ00108	1388	PTZ00108, PTZ00108, DNA topoisomerase 2-like prote	2e-04
pfam03839	217	pfam03839, Sec62, Translocation protein Sec62	2e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-04
pfam13166	713	pfam13166, AAA_13, AAA domain	2e-04
pfam08208	193	pfam08208, RNA_polI_A34, DNA-directed RNA polymera	3e-04
TIGR01554	384	TIGR01554, major_cap_HK97, phage major capsid prot	3e-04
pfam07767	387	pfam07767, Nop53, Nop53 (60S ribosomal biogenesis)	3e-04
PRK14521	186	PRK14521, rpsP, 30S ribosomal protein S16; Provisi	3e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-04
PTZ00399	651	PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Pro	3e-04
pfam08496	154	pfam08496, Peptidase_S49_N, Peptidase family S49 N	3e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-04
PTZ00074	135	PTZ00074, PTZ00074, 60S ribosomal protein L34; Pro	3e-04
PTZ00074	135	PTZ00074, PTZ00074, 60S ribosomal protein L34; Pro	3e-04
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	3e-04
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	3e-04
pfam05262	489	pfam05262, Borrelia_P83, Borrelia P83/100 protein	3e-04
pfam08576	98	pfam08576, DUF1764, Eukaryotic protein of unknown	3e-04
pfam09507	427	pfam09507, CDC27, DNA polymerase subunit Cdc27	3e-04
pfam03064	238	pfam03064, U79_P34, HSV U79 / HCMV P34	3e-04
pfam05793	528	pfam05793, TFIIF_alpha, Transcription initiation f	3e-04
pfam09428	130	pfam09428, DUF2011, Fungal protein of unknown func	3e-04
pfam09428	130	pfam09428, DUF2011, Fungal protein of unknown func	3e-04
pfam10278	178	pfam10278, Med19, Mediator of RNA pol II transcrip	3e-04
pfam14153	185	pfam14153, Spore_coat_CotO, Spore coat protein Cot	3e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-04
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-04
PTZ00372	413	PTZ00372, PTZ00372, endonuclease 4-like protein; P	4e-04
TIGR02794	346	TIGR02794, tolA_full, TolA protein	4e-04
COG4499	434	COG4499, COG4499, Predicted membrane protein [Func	4e-04
PLN02381	1066	PLN02381, PLN02381, valyl-tRNA synthetase	4e-04
pfam03064	238	pfam03064, U79_P34, HSV U79 / HCMV P34	4e-04
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-04
pfam06375	561	pfam06375, BLVR, Bovine leukaemia virus receptor (	4e-04
pfam13148	379	pfam13148, DUF3987, Protein of unknown function (D	4e-04
pfam14181	155	pfam14181, YqfQ, YqfQ-like protein	4e-04
pfam09805	134	pfam09805, Nop25, Nucleolar protein 12 (25kDa)	4e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	4e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-04
pfam10310	436	pfam10310, DUF2413, Protein of unknown function (D	4e-04
pfam13476	204	pfam13476, AAA_23, AAA domain	4e-04
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	4e-04
COG1498	395	COG1498, SIK1, Protein implicated in ribosomal bio	4e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	5e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	5e-04
PRK14552	414	PRK14552, PRK14552, C/D box methylation guide ribo	5e-04
COG4499	434	COG4499, COG4499, Predicted membrane protein [Func	5e-04
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	5e-04
PRK04950	213	PRK04950, PRK04950, ProP expression regulator; Pro	5e-04
PRK12280	158	PRK12280, rplW, 50S ribosomal protein L23; Reviewe	5e-04
pfam14181	155	pfam14181, YqfQ, YqfQ-like protein	5e-04
COG1498	395	COG1498, SIK1, Protein implicated in ribosomal bio	5e-04
pfam11208	132	pfam11208, DUF2992, Protein of unknown function (D	5e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	5e-04
pfam14303	147	pfam14303, NAM-associated, No apical meristem-asso	5e-04
pfam08524	150	pfam08524, rRNA_processing, rRNA processing	5e-04
PRK07561	859	PRK07561, PRK07561, DNA topoisomerase I subunit om	5e-04
TIGR02168	1179	TIGR02168, SMC_prok_B, chromosome segregation prot	5e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	6e-04
PRK11192	434	PRK11192, PRK11192, ATP-dependent RNA helicase Srm	6e-04
pfam08208	193	pfam08208, RNA_polI_A34, DNA-directed RNA polymera	6e-04
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	6e-04
pfam08496	154	pfam08496, Peptidase_S49_N, Peptidase family S49 N	6e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-04
TIGR01642	509	TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, la	6e-04
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	6e-04
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	6e-04
PRK00409	782	PRK00409, PRK00409, recombination and DNA strand e	6e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-04
TIGR01622	457	TIGR01622, SF-CC1, splicing factor, CC1-like famil	6e-04
pfam09831	177	pfam09831, DUF2058, Uncharacterized protein conser	6e-04
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	7e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	7e-04
pfam12569	516	pfam12569, NARP1, NMDA receptor-regulated protein	7e-04
COG4499	434	COG4499, COG4499, Predicted membrane protein [Func	7e-04
PTZ00074	135	PTZ00074, PTZ00074, 60S ribosomal protein L34; Pro	7e-04
pfam09507	427	pfam09507, CDC27, DNA polymerase subunit Cdc27	7e-04
pfam03286	198	pfam03286, Pox_Ag35, Pox virus Ag35 surface protei	7e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	7e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	7e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	7e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	7e-04
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	8e-04
pfam11861	154	pfam11861, DUF3381, Domain of unknown function (DU	8e-04
COG0810	244	COG0810, TonB, Periplasmic protein TonB, links inn	8e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-04
pfam09073	424	pfam09073, BUD22, BUD22	8e-04
PTZ00074	135	PTZ00074, PTZ00074, 60S ribosomal protein L34; Pro	8e-04
pfam05262	489	pfam05262, Borrelia_P83, Borrelia P83/100 protein	8e-04
pfam03064	238	pfam03064, U79_P34, HSV U79 / HCMV P34	8e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	8e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	8e-04
PRK11778	330	PRK11778, PRK11778, putative inner membrane peptid	8e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	9e-04
COG0810	244	COG0810, TonB, Periplasmic protein TonB, links inn	9e-04
pfam09736	141	pfam09736, Bud13, Pre-mRNA-splicing factor of RES	9e-04
pfam09428	130	pfam09428, DUF2011, Fungal protein of unknown func	9e-04
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	9e-04
pfam06102	168	pfam06102, DUF947, Domain of unknown function (DUF	9e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.001
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.001
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.001
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	0.001
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	0.001
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.001
pfam09756	189	pfam09756, DDRGK, DDRGK domain	0.001
pfam06658	142	pfam06658, DUF1168, Protein of unknown function (D	0.001
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	0.001
PRK14521	186	PRK14521, rpsP, 30S ribosomal protein S16; Provisi	0.001
PTZ00372	413	PTZ00372, PTZ00372, endonuclease 4-like protein; P	0.001
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	0.001
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	0.001
PTZ00399	651	PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Pro	0.001
pfam08496	154	pfam08496, Peptidase_S49_N, Peptidase family S49 N	0.001
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.001
PTZ00108	1388	PTZ00108, PTZ00108, DNA topoisomerase 2-like prote	0.001
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	0.001
pfam10278	178	pfam10278, Med19, Mediator of RNA pol II transcrip	0.001
pfam14181	155	pfam14181, YqfQ, YqfQ-like protein	0.001
pfam09805	134	pfam09805, Nop25, Nucleolar protein 12 (25kDa)	0.001
pfam13476	204	pfam13476, AAA_23, AAA domain	0.001
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.001
COG1498	395	COG1498, SIK1, Protein implicated in ribosomal bio	0.001
pfam14303	147	pfam14303, NAM-associated, No apical meristem-asso	0.001
PRK11778	330	PRK11778, PRK11778, putative inner membrane peptid	0.001
pfam03154	979	pfam03154, Atrophin-1, Atrophin-1 family	0.001
PHA03089	191	PHA03089, PHA03089, late transcription factor VLTF	0.001
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	0.001
PRK09510	387	PRK09510, tolA, cell envelope integrity inner memb	0.001
pfam02029	431	pfam02029, Caldesmon, Caldesmon	0.001
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.001
pfam08555	90	pfam08555, DUF1754, Eukaryotic family of unknown f	0.001
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.001
COG5116	926	COG5116, RPN2, 26S proteasome regulatory complex c	0.001
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.001
pfam04935	206	pfam04935, SURF6, Surfeit locus protein 6	0.001
pfam04935	206	pfam04935, SURF6, Surfeit locus protein 6	0.001
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	0.001
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	0.001
COG3064	387	COG3064, TolA, Membrane protein involved in colici	0.001
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	0.001
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.002
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.002
PRK04195	482	PRK04195, PRK04195, replication factor C large sub	0.002
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	0.002
pfam07423	214	pfam07423, DUF1510, Protein of unknown function (D	0.002
pfam12569	516	pfam12569, NARP1, NMDA receptor-regulated protein	0.002
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	0.002
PLN02381	1066	PLN02381, PLN02381, valyl-tRNA synthetase	0.002
PTZ00399	651	PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Pro	0.002
smart00435	391	smart00435, TOPEUc, DNA Topoisomerase I (eukaryota	0.002
PRK04950	213	PRK04950, PRK04950, ProP expression regulator; Pro	0.002
pfam09073	424	pfam09073, BUD22, BUD22	0.002
pfam03839	217	pfam03839, Sec62, Translocation protein Sec62	0.002
pfam05262	489	pfam05262, Borrelia_P83, Borrelia P83/100 protein	0.002
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.002
pfam13476	204	pfam13476, AAA_23, AAA domain	0.002
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.002
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.002
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.002
PHA03089	191	PHA03089, PHA03089, late transcription factor VLTF	0.002
PRK09510	387	PRK09510, tolA, cell envelope integrity inner memb	0.002
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.002
TIGR03319	514	TIGR03319, RNase_Y, ribonuclease Y	0.002
PTZ00144	418	PTZ00144, PTZ00144, dihydrolipoamide succinyltrans	0.002
pfam08229	196	pfam08229, SHR3_chaperone, ER membrane protein SH3	0.002
pfam02724	583	pfam02724, CDC45, CDC45-like protein	0.002
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	0.002
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	0.002
pfam10659	98	pfam10659, Trypan_glycop_C, Trypanosome variant su	0.002
PTZ00053	470	PTZ00053, PTZ00053, methionine aminopeptidase 2; P	0.002
PTZ00053	470	PTZ00053, PTZ00053, methionine aminopeptidase 2; P	0.002
PRK06402	106	PRK06402, rpl12p, 50S ribosomal protein L12P; Revi	0.002
pfam09468	287	pfam09468, RNase_H2-Ydr279, Ydr279p protein family	0.002
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	0.002
PTZ00069	300	PTZ00069, PTZ00069, 60S ribosomal protein L5; Prov	0.002
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	0.003
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.003
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.003
pfam12569	516	pfam12569, NARP1, NMDA receptor-regulated protein	0.003
PRK14552	414	PRK14552, PRK14552, C/D box methylation guide ribo	0.003
pfam14265	125	pfam14265, DUF4355, Domain of unknown function (DU	0.003
pfam08496	154	pfam08496, Peptidase_S49_N, Peptidase family S49 N	0.003
PRK04950	213	PRK04950, PRK04950, ProP expression regulator; Pro	0.003
COG0810	244	COG0810, TonB, Periplasmic protein TonB, links inn	0.003
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.003
pfam03064	238	pfam03064, U79_P34, HSV U79 / HCMV P34	0.003
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.003
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.003
pfam13148	379	pfam13148, DUF3987, Protein of unknown function (D	0.003
pfam14181	155	pfam14181, YqfQ, YqfQ-like protein	0.003
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.003
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.003
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.003
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.003
PRK07561	859	PRK07561, PRK07561, DNA topoisomerase I subunit om	0.003
cd00660	215	cd00660, Topoisomer_IB_N, Topoisomer_IB_N: N-termi	0.003
pfam03343	603	pfam03343, SART-1, SART-1 family	0.003
COG5604	523	COG5604, COG5604, Uncharacterized conserved protei	0.003
pfam04641	254	pfam04641, Rtf2, Replication termination factor 2	0.003
smart00935	140	smart00935, OmpH, Outer membrane protein (OmpH-lik	0.003
pfam07543	139	pfam07543, PGA2, Protein trafficking PGA2	0.003
PRK14160	211	PRK14160, PRK14160, heat shock protein GrpE; Provi	0.003
COG1390	194	COG1390, NtpE, Archaeal/vacuolar-type H+-ATPase su	0.003
PLN00040	233	PLN00040, PLN00040, Protein MAK16 homolog; Provisi	0.003
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.003
PRK12704	520	PRK12704, PRK12704, phosphodiesterase; Provisional	0.004
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.004
pfam14265	125	pfam14265, DUF4355, Domain of unknown function (DU	0.004
COG4499	434	COG4499, COG4499, Predicted membrane protein [Func	0.004
pfam02463	1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	0.004
pfam04615	728	pfam04615, Utp14, Utp14 protein	0.004
COG4942	420	COG4942, COG4942, Membrane-bound metallopeptidase	0.004
pfam00183	529	pfam00183, HSP90, Hsp90 protein	0.004
COG0810	244	COG0810, TonB, Periplasmic protein TonB, links inn	0.004
COG0810	244	COG0810, TonB, Periplasmic protein TonB, links inn	0.004
pfam09736	141	pfam09736, Bud13, Pre-mRNA-splicing factor of RES	0.004
pfam03839	217	pfam03839, Sec62, Translocation protein Sec62	0.004
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	0.004
pfam08576	98	pfam08576, DUF1764, Eukaryotic protein of unknown	0.004
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.004
COG1196	1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.004
PRK05901	509	PRK05901, PRK05901, RNA polymerase sigma factor; P	0.004
pfam11208	132	pfam11208, DUF2992, Protein of unknown function (D	0.004
pfam14303	147	pfam14303, NAM-associated, No apical meristem-asso	0.004
PRK07561	859	PRK07561, PRK07561, DNA topoisomerase I subunit om	0.004
PHA03089	191	PHA03089, PHA03089, late transcription factor VLTF	0.004
PRK09510	387	PRK09510, tolA, cell envelope integrity inner memb	0.004
pfam08555	90	pfam08555, DUF1754, Eukaryotic family of unknown f	0.004
CHL00204	1832	CHL00204, ycf1, Ycf1; Provisional	0.004
CHL00204	1832	CHL00204, ycf1, Ycf1; Provisional	0.004
COG5192	1077	COG5192, BMS1, GTP-binding protein required for 40	0.004
cd02988	192	cd02988, Phd_like_VIAF, Phosducin (Phd)-like famil	0.004
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	0.004
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.004
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.004
PLN02967	581	PLN02967, PLN02967, kinase	0.004
pfam06991	277	pfam06991, Prp19_bind, Splicing factor, Prp19-bind	0.004
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.004
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.004
cd08045	212	cd08045, TAF4, TATA Binding Protein (TBP) Associat	0.004
pfam05178	99	pfam05178, Kri1, KRI1-like family	0.004

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  413 bits (1064), Expect = e-144
 Identities = 176/243 (72%), Positives = 196/243 (80%), Gaps = 14/243 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLARVEEPD +K MTQEVVTQYYRAPEILMG+RHY++AVD+WSVGCIFAELLGRR
Sbjct: 143 KICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           ILFQAQSP+QQL LITDLLGTP+ E MR AC+GA+ H+LR   K  SL  LY+LSSQAT 
Sbjct: 203 ILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATH 262

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPG 303
           EAVHLL +ML FDP KRIS   AL HPYLDEGRLR+H+CMCKCCYTT             
Sbjct: 263 EAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTS------------ 310

Query: 304 GGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA 363
             GGR YT DFEPSA  PFDD +E+ LTSV+QVKEE+H+FI EQ   +RVPLCINPQSAA
Sbjct: 311 --GGRVYTSDFEPSANPPFDDEYEKNLTSVRQVKEELHQFILEQQQGNRVPLCINPQSAA 368

Query: 364 FKS 366
           FKS
Sbjct: 369 FKS 371

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  208 bits (531), Expect = 3e-64
 Identities = 71/169 (42%), Positives = 108/169 (63%), Gaps = 7/169 (4%)

Query: 124 KICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           KICDFGLAR  +PD ++   +T+ VVT++YRAPE+L+ +  Y+ A+D+WSVGCIFAELL 
Sbjct: 143 KICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLT 202

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHML-RQTRKSQSLSSLYSLSS 239
           R+ LF  +  + QL LI ++LGTP+ E+++    + A+ ++     +  + LS L+  +S
Sbjct: 203 RKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGAS 262

Query: 240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCY 288
               EA+ LL +ML FDP KRI+ + AL HPYL +        + K  +
Sbjct: 263 P---EAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPPF 308

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  163 bits (415), Expect = 1e-47
 Identities = 64/149 (42%), Positives = 82/149 (55%), Gaps = 4/149 (2%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G++HYS AVD+WSVGCIFAE++  +
Sbjct: 138 KLADFGLARAFGI-PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGK 196

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF   S + QL  I  +LGTPT E                    + L  +         
Sbjct: 197 PLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDP--- 253

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           E + LL +ML ++P KRIS   AL HPY 
Sbjct: 254 EGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  162 bits (413), Expect = 7e-47
 Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 42/222 (18%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLAR    +    MT+ VVT++YRAPE+L+    Y+ A+DVWSVGCIFAELLGR+
Sbjct: 148 KICDFGLARTTS-EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRK 206

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHM--LRQTRKSQSLSSLYSLSSQ 240
            LF  +  V QL LIT+LLG+P+ E++     + A+ ++  L  T + QS + L+     
Sbjct: 207 PLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPR-QSFARLF---PH 262

Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLS 300
           A   A+ LL +ML FDP+KRI+V  AL HPYL                   +    P+  
Sbjct: 263 ANPLAIDLLEKMLVFDPSKRITVEEALAHPYL-------------------ASLHDPSD- 302

Query: 301 IPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHK 342
                         EP    PF   +E    + + +KE ++ 
Sbjct: 303 --------------EPVCQTPFSFDFEEDALTEEDIKELIYN 330

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  157 bits (399), Expect = 4e-45
 Identities = 73/176 (41%), Positives = 93/176 (52%), Gaps = 20/176 (11%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     PN+ MT +VVT++YRAPE+L GARHY   VD+WSVGCIFAELL R 
Sbjct: 142 KLADFGLAR-SFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV 200

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
                 S + QLG I + LGTPT E       G          K    + L  +   A+ 
Sbjct: 201 PFLPGDSDIDQLGKIFEALGTPTEENW----PGVTSLPDYVEFKPFPPTPLKQIFPAASD 256

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTL 299
           +A+ LL ++L  +P KRI+   AL HPY       F +         P+PT P  L
Sbjct: 257 DALDLLQRLLTLNPNKRITARQALEHPY-------FSN--------DPAPTPPSQL 297

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  154 bits (391), Expect = 3e-44
 Identities = 68/149 (45%), Positives = 88/149 (59%), Gaps = 3/149 (2%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T  VVT++YRAPE+L+G + YS  VD+WSVGCIFAELL RR
Sbjct: 138 KLADFGLARSFGS-PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF  +S + QL  I   LGTP PE        A+ +        ++   L  L   A+ 
Sbjct: 197 PLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS--FPKKAGMPLPKLFPNASP 254

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           +A+ LL QML++DP KRI+   AL HPY 
Sbjct: 255 QALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  149 bits (379), Expect = 2e-42
 Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 8/152 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR+   +  +  + +V T++YRAPE+L GAR Y   VD+W+VGCIFAELL   
Sbjct: 139 KIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGS 198

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPE---EMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQ 240
            LF  ++ ++QL ++   LGTP  E    +    D  K        K   L  ++     
Sbjct: 199 PLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF--PESKPIPLEEIF---PD 253

Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           A+ EA+ LL  +L +DP+KR+S   AL HPY 
Sbjct: 254 ASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  146 bits (370), Expect = 5e-41
 Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 5/150 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR      +   T  V+T +YR PE+L+GA  Y   VD+WSVGCI AEL   +
Sbjct: 140 KLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGK 199

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACD--GAKCHMLRQTRKSQSLSSLYSLSSQA 241
            +FQ  + ++QL  I +L G+PT E           +    ++  K +       L    
Sbjct: 200 PIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDP- 258

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
              A+ LL ++L  DP KRIS + AL H Y
Sbjct: 259 --SALDLLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  145 bits (368), Expect = 1e-40
 Identities = 74/158 (46%), Positives = 90/158 (56%), Gaps = 21/158 (13%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLAR E   P K  TQ VVT +YRAPE+L+GA+ YS A+D+WSVGCIFAELL ++
Sbjct: 146 KICDFGLAR-EYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204

Query: 184 ILFQAQSPVQQLGLITDLLGTPT----PE--EMRHACDGAKCHMLRQT----RKSQSLSS 233
            LF  +S + QL  I  LLGTPT    P   E+  A    K    +      RK     S
Sbjct: 205 PLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA---KKKTFTKYPYNQLRKKFPALS 261

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
           L       +     LL ++L +DP KRIS   AL HPY
Sbjct: 262 L-------SDNGFDLLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score =  146 bits (370), Expect = 1e-40
 Identities = 68/156 (43%), Positives = 92/156 (58%), Gaps = 8/156 (5%)

Query: 124 KICDFGLARVEEPDPNKA---MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KICDFGLAR    +P +    MT+ V T++YRAPEI++  + Y+ A+DVWSVGCI AELL
Sbjct: 145 KICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL 204

Query: 181 GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ--TRKSQSLSSLYSLS 238
           GR+ +F+ +  V QL  I  +LGTP  E +         + +R       +   S++   
Sbjct: 205 GRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIF--- 261

Query: 239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             A   A+ LL ++L FDPTKRISV  AL HPYL  
Sbjct: 262 PNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI 297

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  146 bits (370), Expect = 1e-40
 Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 13/164 (7%)

Query: 124 KICDFGLAR----VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
           K+ DFGLAR    +EE   N  +T  V T++YRAPEIL+G+  Y+  VD+WSVGCI  E+
Sbjct: 147 KLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEM 206

Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR--QTRKSQSLSSLYSL 237
           L  + LF   S + QL  I +++G P+ E++          ML    +R  + L  L   
Sbjct: 207 LLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELL-- 264

Query: 238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHS 281
             +A+ +A+ LL ++L F+P KR++   AL HPY+     +FH+
Sbjct: 265 -PKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVA----QFHN 303

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  142 bits (360), Expect = 4e-39
 Identities = 66/156 (42%), Positives = 98/156 (62%), Gaps = 9/156 (5%)

Query: 124 KICDFGLARVEEP--DPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           KICDFGLAR+ +P  D    +T+ V T++YRAPEI++ ++ Y+ A+D+WSVGCI AE+L 
Sbjct: 146 KICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLS 205

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHAC-DGAKCHM--LRQTRKSQSLSSLYSLS 238
            R LF  +  + QL LI  +LGTP+ E++       A+ ++  L    K    + L+   
Sbjct: 206 NRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPK-VPWNKLF--- 261

Query: 239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             A  +A+ LL +ML F+P KRI+V  AL HPYL++
Sbjct: 262 PNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  138 bits (351), Expect = 2e-38
 Identities = 65/149 (43%), Positives = 84/149 (56%), Gaps = 8/149 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR+       A+T  VVT +YRAPE+L+ +  Y+  VD+WSVGCIFAEL  RR
Sbjct: 147 KIADFGLARIY--SFEMALTSVVVTLWYRAPEVLLQS-SYATPVDMWSVGCIFAELFRRR 203

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF+  S   QL  I D++G P+ EE           + R +  S +  S  S   +   
Sbjct: 204 PLFRGTSEADQLDKIFDVIGLPSEEEWP-----RNVSLPRSSFPSYTPRSFKSFVPEICE 258

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           E + LL +ML F+P KRIS   AL HPY 
Sbjct: 259 EGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  139 bits (353), Expect = 3e-38
 Identities = 84/228 (36%), Positives = 117/228 (51%), Gaps = 54/228 (23%)

Query: 124 KICDFGLAR--VEEPDPNKA-MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           +I DFG+AR     P  +K  MT+ V T++YRAPE+L+    Y+ A+D+WSVGCIFAE+L
Sbjct: 147 RIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML 206

Query: 181 GRRILFQAQSPVQQLGLITDLLGTPTPEEM--RHACDGAKCHMLRQTRKS-QSLSS---- 233
           GRR LF  ++ V QL LI  +LG+P  EE+  R   D        + RK  Q+L      
Sbjct: 207 GRRQLFPGKNYVHQLKLILSVLGSP-SEEVLNRIGSD--------RVRKYIQNLPRKQPV 257

Query: 234 -LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPS 292
               +  +A+ EA+ LL QML FDP +RI+V  AL HP+L     ++H            
Sbjct: 258 PWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA----QYHD----------- 302

Query: 293 PTSPPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEM 340
                               D EP+ P PFD  +E    S +Q+KE +
Sbjct: 303 -------------------PDDEPTCPPPFDFDFEAIELSREQLKEAI 331

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  138 bits (348), Expect = 1e-37
 Identities = 67/151 (44%), Positives = 87/151 (57%), Gaps = 9/151 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KICDFGLAR+++P     MT  V T+YYRAPEI++  + Y   VD+WS GCIFAE+L  +
Sbjct: 148 KICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ--TRKSQSLSSLYSLSSQA 241
            LF  +  V Q  +ITDLLGTP  + +   C       ++    R+    S  +     A
Sbjct: 204 PLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKF---KNA 260

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
              A+ LL +ML FDP KRIS   AL HPYL
Sbjct: 261 DPSAIDLLEKMLVFDPQKRISAAEALAHPYL 291

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  137 bits (348), Expect = 3e-37
 Identities = 79/226 (34%), Positives = 104/226 (46%), Gaps = 50/226 (22%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR  +      MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  +
Sbjct: 158 KILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPE-----EMRHACDGAKCHMLRQTRKSQSLSSLYSLS 238
            LF     + QL  I +L+GTP  E         A +  +   L Q  K         + 
Sbjct: 214 TLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQ--SLPQMPK----KDFKEVF 267

Query: 239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPT 298
           S A   A+ LL +ML  DP KRI+   AL HPYL E             Y  P       
Sbjct: 268 SGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE-------------YHDPED----- 309

Query: 299 LSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFI 344
                           EP AP P+D ++E +  +V + KE ++K I
Sbjct: 310 ----------------EPVAP-PYDQSFESRDLTVDEWKELVYKEI 338

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  135 bits (343), Expect = 7e-37
 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 18/165 (10%)

Query: 124 KICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI D GLAR+    P K +      VVT +YRAPE+L+GARHY+ A+D+W++GCIFAELL
Sbjct: 152 KIGDLGLARLFNA-PLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210

Query: 181 GRRILFQ-------AQSPVQ--QLGLITDLLGTPTPEE---MRHACDGAKCHMLRQTRK- 227
               +F+         +P Q  QL  I ++LGTPT ++   ++   +        +T+  
Sbjct: 211 TLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTY 270

Query: 228 -SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
            S SL+       +   +   LL ++L +DPTKRI+   AL HPY
Sbjct: 271 PSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  133 bits (337), Expect = 3e-36
 Identities = 69/150 (46%), Positives = 86/150 (57%), Gaps = 5/150 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D GL R     P K+ T E+VT +YRAPE+L+G+ HYS  VD+WSVGCIFAE+  ++
Sbjct: 151 KIADLGLGRAFSI-PVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQ 209

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF   S +QQL  I  LLGTPT +           H   Q  K Q LS         + 
Sbjct: 210 PLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQW-KPQDLSRAV---PDLSP 265

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLD 273
           E + LL +ML +DP KRIS  +AL HPY D
Sbjct: 266 EGLDLLQKMLRYDPAKRISAKAALTHPYFD 295

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  128 bits (323), Expect = 4e-34
 Identities = 61/157 (38%), Positives = 84/157 (53%), Gaps = 15/157 (9%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR     P K MT +VVT +YRAPE+L+G   Y+ A+D+W+VGCI AELL  +
Sbjct: 148 KIADFGLARTYGL-PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPE------EMRHACDGAKCHMLRQTRKSQSLSSLYSL 237
            L   +S ++QL LI  LLGTP         ++       K  + +Q     +L   +  
Sbjct: 207 PLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLV---GKFTLPKQ--PYNNLKHKFPW 261

Query: 238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            S+A    + LL  +L +DP KR +   AL   Y  E
Sbjct: 262 LSEA---GLRLLNFLLMYDPKKRATAEEALESSYFKE 295

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  126 bits (318), Expect = 1e-33
 Identities = 67/157 (42%), Positives = 86/157 (54%), Gaps = 20/157 (12%)

Query: 124 KICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFGLAR   V    P +  T EVVT +YRAPEIL+G+R YS  VD+WS+GCIFAE++
Sbjct: 139 KLADFGLARAFGV----PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMV 194

Query: 181 GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR----KSQSLSSL-Y 235
            RR LF   S + QL  I   LGTP  +       G       +        Q LS +  
Sbjct: 195 NRRPLFPGDSEIDQLFRIFRTLGTPDED----VWPGVTSLPDYKPTFPKWARQDLSKVVP 250

Query: 236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           +L      + + LL +ML +DP KRIS  +AL HPY 
Sbjct: 251 NLDE----DGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  125 bits (317), Expect = 2e-33
 Identities = 62/154 (40%), Positives = 85/154 (55%), Gaps = 6/154 (3%)

Query: 120 TYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAE 178
               KI DFGLAR +    P    T  V T++YRAPEIL+ +  YS+ VD+W++GCI AE
Sbjct: 135 PEVVKIADFGLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAE 191

Query: 179 LLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS 238
           L   R LF   S + QL  I  +LGTPT ++       A     R  + +   +SL+ L 
Sbjct: 192 LYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAP--TSLHQLI 249

Query: 239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             A+ EA+ L+  ML +DP KR + + AL HPY 
Sbjct: 250 PNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  124 bits (314), Expect = 9e-33
 Identities = 63/160 (39%), Positives = 87/160 (54%), Gaps = 16/160 (10%)

Query: 124 KICDFGLARV-EEPDPN---------KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVG 173
           KI DFGLAR  + P PN         +  T  VVT++YR PE+L+G R Y+ AVD+W +G
Sbjct: 155 KIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIG 214

Query: 174 CIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR-QTRKSQSLS 232
           C+FAE+  RR + Q +S + QL LI  L GTPT E          C  +   T   ++L 
Sbjct: 215 CVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLE 274

Query: 233 SLY-SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
             +  L      E + LL ++L  DP KR++ + AL HPY
Sbjct: 275 ERFGKLGP----EGLDLLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  123 bits (310), Expect = 2e-32
 Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 4/163 (2%)

Query: 112 RQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWS 171
           + L++ + T + K+ DFGLAR     P +  T EVVT +YRAPEIL+G+RHYS  VD+WS
Sbjct: 131 QNLLIDRRTNALKLADFGLARAFGI-PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWS 189

Query: 172 VGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL 231
           VGCIFAE++ ++ LF   S + +L  I  +LGTP  EE             +        
Sbjct: 190 VGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPN-EETWPGV--TSLPDYKSAFPKWPP 246

Query: 232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             L ++        V LL +ML  DP+KRI+  +AL H Y  +
Sbjct: 247 KDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289

Length = 294

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score =  122 bits (308), Expect = 1e-31
 Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR         MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++   
Sbjct: 158 KILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIRGT 214

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML-RQTRKSQSLSSLY------- 235
           +LF     + Q   I + LGTP+ E M       + ++  R      S   L+       
Sbjct: 215 VLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPP 274

Query: 236 ---SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
              S +     +A  LL +ML  DP KRISV+ AL HPY+
Sbjct: 275 DSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYI 314

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  120 bits (302), Expect = 3e-31
 Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 4/149 (2%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPE+L+G+  YS  VD+WS+G IFAE+  ++
Sbjct: 141 KLADFGLARAFGI-PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF   S + QL  I  +LGTPT +              + T       SL S       
Sbjct: 200 PLFHGDSEIDQLFRIFRILGTPTEDVWP---GVTSLPDYKNTFPKWKKGSLRSAVKNLDE 256

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           + + LL +ML +DP KRIS   AL HPY 
Sbjct: 257 DGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  119 bits (301), Expect = 3e-31
 Identities = 65/150 (43%), Positives = 84/150 (56%), Gaps = 8/150 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 140 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 198

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACD--GAKCHMLRQTRKSQSLSSLYSLSSQA 241
            LF   S + QL  I   LGTP              K    +  R  Q  S +     + 
Sbjct: 199 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWAR--QDFSKVVPPLDE- 255

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
             +   LL QML++DP KRIS  +AL HP+
Sbjct: 256 --DGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  121 bits (304), Expect = 3e-31
 Identities = 66/167 (39%), Positives = 88/167 (52%), Gaps = 29/167 (17%)

Query: 124 KICDFGLAR-------------VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           KI DFGLAR              E     + MT +VVT +YRAPE+LMGA  Y  AVD+W
Sbjct: 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMW 218

Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHA------CDGAKCHMLRQ 224
           SVGCIFAELL  + LF  ++ + QLG I +LLGTP  +    A       +         
Sbjct: 219 SVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTP------ 272

Query: 225 TRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
            RK + L +++  +S    +A+ LL  +L  +P +RIS   AL H Y
Sbjct: 273 -RKPKDLKTIFPNASD---DAIDLLQSLLKLNPLERISAKEALKHEY 315

Length = 335

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  115 bits (290), Expect = 7e-30
 Identities = 48/149 (32%), Positives = 66/149 (44%), Gaps = 26/149 (17%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLA+      + ++T  V T +Y APE+L+G   Y   VDVWS+G I  ELL  +
Sbjct: 138 KIADFGLAKKLL-KSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGK 196

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F  ++ + QL LI  +LG P                              S S     
Sbjct: 197 PPFSGENILDQLQLIRRILGPPLEF---------------------DEPKWSSGSE---- 231

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           EA  L+ + L  DP+KR +    L HP+ 
Sbjct: 232 EAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  117 bits (294), Expect = 8e-30
 Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 6/152 (3%)

Query: 124 KICDFGLARVEEPDPNKAM--TQEVVTQYYRAPEILMGA--RHYSAAVDVWSVGCIFAEL 179
           KICDFGLARV   D   A+  T  V T++YRAPE L G+    Y+ A+D+WS+GCIFAE+
Sbjct: 143 KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEV 201

Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS 239
           L  + LF  ++ V QL LITDLLGTP+PE +    +      L   RK Q +        
Sbjct: 202 LTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPV-PFSQKFP 260

Query: 240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
            A   A+ LL ++L FDP  R +   AL  PY
Sbjct: 261 NADPLALRLLERLLAFDPKDRPTAEEALADPY 292

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  116 bits (291), Expect = 8e-30
 Identities = 55/148 (37%), Positives = 78/148 (52%), Gaps = 4/148 (2%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR      N   + EVVT +YRAP++L+G+R YS ++D+WSVGCI AE++  R
Sbjct: 140 KLADFGLARAFGIPVNT-FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF   +   QL  I  ++GTPT           +          Q L  L+     A  
Sbjct: 199 PLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLF---PHADP 255

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPY 271
             + LL ++L  +P  RIS + AL HP+
Sbjct: 256 LGIDLLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  114 bits (288), Expect = 1e-29
 Identities = 48/149 (32%), Positives = 66/149 (44%), Gaps = 31/149 (20%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR    DP + +T  V T  Y APE+L+G + Y  AVD+WS+G I  ELL  +
Sbjct: 137 KLADFGLARQL--DPGEKLTTFVGTPEYMAPEVLLG-KGYGKAVDIWSLGVILYELLTGK 193

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F       QL  +   +G P P                       +S           
Sbjct: 194 PPFPGDD---QLLELFKKIGKPKPPFPPP---------------EWDISP---------- 225

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           EA  L+ ++L  DP KR++   AL HP+ 
Sbjct: 226 EAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  113 bits (284), Expect = 1e-28
 Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 2/149 (1%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR+   + ++  T +V+T +YR PE+L+G   Y  A+DVWS GCI  EL  ++
Sbjct: 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            +FQA   + QL LI+ L G+P P            + ++   K Q    L    S    
Sbjct: 216 PIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP--KKQYRRRLREEFSFIPT 273

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            A+ LL  ML  DP+KR +   AL  P+L
Sbjct: 274 PALDLLDHMLTLDPSKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score =  112 bits (282), Expect = 2e-28
 Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR +   P+K  + EVVT +YR P++L+G+  YS ++D+W VGCIF E+   R
Sbjct: 143 KLADFGLARAKSV-PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201

Query: 184 ILFQAQSPVQ-QLGLITDLLGTPTPEEMR--HACDGAKCHMLRQTRKSQSLSSLYSLSSQ 240
            LF   + V+ QL  I  +LGTPT E      +    K +          ++    L   
Sbjct: 202 PLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRI 261

Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             GE   L ++ L ++P KRIS   A+ HPY 
Sbjct: 262 PHGE--ELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  112 bits (282), Expect = 2e-28
 Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 23/161 (14%)

Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
           K+ DFGLAR     +   PN+  T  VVT +YR PE+L+G R Y   +D+W  GCI AE+
Sbjct: 159 KLADFGLARAFSLSKNSKPNR-YTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEM 217

Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPE--------EMRHACDGAKCHMLRQT-RKSQS 230
             R  + Q  +   QL LI+ L G+ TPE        E+    +  +    +   R    
Sbjct: 218 WTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPY 277

Query: 231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
           +   +         A+ L+ ++L  DP KRI  ++AL H +
Sbjct: 278 VKDPH---------ALDLIDKLLVLDPAKRIDADTALNHDF 309

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score =  109 bits (273), Expect = 9e-27
 Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 124 KICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           KI DFGLAR+ +P  +    +++ +VT++YR+P +L+   +Y+ A+D+W+ GCIFAE+L 
Sbjct: 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 214

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
            + LF     ++Q+ LI + +     EE R+         +R     +    L  L    
Sbjct: 215 GKPLFAGAHELEQMQLILESVPV-VREEDRNELLNVIPSFVRND-GGEPRRPLRDLLPGV 272

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             EA+  L Q+L F+P  R++   AL HPY+
Sbjct: 273 NPEALDFLEQILTFNPMDRLTAEEALMHPYM 303

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  106 bits (267), Expect = 5e-26
 Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 11/154 (7%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR  + +    MT  VVT++YRAPE+++   HY+  VD+WSVGCI AE+L  +
Sbjct: 158 KILDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPE-EMRHACDGAKCHM--LRQTRKSQSLSSLYSLSSQ 240
            LF+    + QL  I  + GTP+ E   +   + AK ++  L + RK        SL   
Sbjct: 214 PLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRK----KDFRSLLPN 269

Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
           A   AV++L +ML  D   RI+   AL HPY +E
Sbjct: 270 ANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score =  106 bits (266), Expect = 6e-26
 Identities = 63/155 (40%), Positives = 85/155 (54%), Gaps = 17/155 (10%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 160 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKSQSLSSLYSLSSQ-- 240
            LF     + QL LI  L+GTP  E + + + + A+ ++       QSL+ +  ++    
Sbjct: 216 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI-------QSLTQMPKMNFANV 268

Query: 241 ---ATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
              A   AV LL +ML  D  KRI+   AL H Y 
Sbjct: 269 FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  106 bits (265), Expect = 9e-26
 Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 42/216 (19%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  +
Sbjct: 158 RILDFGLAR----QADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
            LF     + QL  I +++GTP+PE ++  + + A+ ++  Q+        L  +   A 
Sbjct: 214 ALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYI--QSLPHMPQQDLKKIFRGAN 271

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIP 302
             A+ LL +ML  D  KRIS + AL HPY  +             Y  P           
Sbjct: 272 PLAIDLLEKMLVLDSDKRISASEALAHPYFSQ-------------YHDP----------- 307

Query: 303 GGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKE 338
                     + EP A  P+D++ E K  ++++ KE
Sbjct: 308 ----------EDEPEAE-PYDESPENKERTIEEWKE 332

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  106 bits (265), Expect = 9e-26
 Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 44/223 (19%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR  + +    MT  VVT++YRAPE+++   HY+  VD+WSVGCI AE+L  +
Sbjct: 157 KILDFGLARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK--SQSLSSLYSLSSQA 241
            LF+ +  + QL  I  + G P PE ++   D A    ++   K   +  S+L+    +A
Sbjct: 213 TLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLF---PKA 269

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSI 301
           + +AV LL +ML  D  KR++   AL HPY D  R                         
Sbjct: 270 SPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR------------------------- 304

Query: 302 PGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFI 344
                      D E    QP+DD+ E +  SV + K+ ++K +
Sbjct: 305 ---------DADEETE-QQPYDDSLENEKLSVDEWKKHIYKEV 337

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  104 bits (261), Expect = 1e-25
 Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 8/149 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR+       A+T  VVT +YRAPE+L+ +  Y+  VD+WSVGCIFAE+  R+
Sbjct: 148 KLADFGLARIYSC--QMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRK 204

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF   S   QLG I DL+G P  ++           + R     +    + S+  +   
Sbjct: 205 PLFCGNSEADQLGKIFDLIGLPPEDDWP-----RDVTLPRGAFSPRGPRPVQSVVPEIEE 259

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
               LL++ML F+P KRIS   AL HP+ 
Sbjct: 260 SGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  103 bits (260), Expect = 2e-25
 Identities = 53/149 (35%), Positives = 72/149 (48%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+CDFG AR     P   +T  V T++YRAPE+L+G  +Y   VDVW++GCI AELL   
Sbjct: 140 KLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGE 199

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF   S + QL LI   LG   P          +   +     SQ  S       + + 
Sbjct: 200 PLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSS 259

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            A+  L   L  DP +R++ +  L HPY 
Sbjct: 260 PALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score =  100 bits (250), Expect = 1e-23
 Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 13/159 (8%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      N  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  EL+   
Sbjct: 163 KILDFGLARTACT--NFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGS 219

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML-RQTRKSQSLSSLY---SLSS 239
           ++FQ    + Q   + + LGTP+ E M       + ++  R      S   L+      S
Sbjct: 220 VIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPS 279

Query: 240 QA------TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           ++      T +A  LL +ML  DP KRISV+ AL HPY+
Sbjct: 280 ESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 98.6 bits (245), Expect = 2e-23
 Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 7/151 (4%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR +   P K  + EVVT +YR P++L+G+  YS  +D+W VGCI  E+   R
Sbjct: 143 KLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGR 201

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGA--KCHMLRQTRKSQSLSSLYSLSSQA 241
            +F   +  ++L LI  LLGTPT E           + ++  Q R    ++    L +  
Sbjct: 202 PMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDT-- 259

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             + + LL  +L ++   RIS  +AL H Y 
Sbjct: 260 --DGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 96.6 bits (241), Expect = 9e-23
 Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 7/149 (4%)

Query: 124 KICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           K+ DFG  R +    P    T+ + T++YRAPE L+   +Y   +D+W+VGC+F E+L  
Sbjct: 139 KLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSL 195

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
             LF   + + Q+  I D+LGTP  E ++        +    ++K   L  L   +S   
Sbjct: 196 FPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASA-- 253

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPY 271
            E + LL ++L +DP +RI+   AL HPY
Sbjct: 254 -EGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 97.9 bits (243), Expect = 1e-22
 Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 13/160 (8%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 159 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 215

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL------SSLYSL 237
           ILF  +  + Q   + + LGTP PE M+      + ++  + + +          SL+  
Sbjct: 216 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 275

Query: 238 SSQ----ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD 273
            S+       +A  LL +ML  DP KRISV+ AL HPY++
Sbjct: 276 DSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 96.0 bits (239), Expect = 2e-22
 Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
           K+ DFGLAR     P +  + EVVT +YR P++L GA+ YS ++D+WS GCIFAEL    
Sbjct: 139 KLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 197

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEE---MRHACDGAKCHMLRQTRKSQSLSSLYSLSS 239
           R LF       QL  I  LLGTPT E    +    D       +      + +SL ++  
Sbjct: 198 RPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD------YKPYPMYPATTSLVNVVP 251

Query: 240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
           +       LL  +L  +P +RIS   AL HPY
Sbjct: 252 KLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 95.5 bits (238), Expect = 2e-22
 Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 6/150 (4%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+CDFG AR+    P    T  V T++YRAPE+L+G   Y   VDVW++GC+FAELL  +
Sbjct: 140 KLCDFGFARILTG-PGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQ 198

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR--QTRKSQSLSSLYSLSSQA 241
            L+  +S V QL LI   LG   P   RH    +     +     + ++   L S     
Sbjct: 199 PLWPGKSDVDQLYLIRKTLGDLIP---RHQQIFSTNQFFKGLSIPEPETREPLESKFPNI 255

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
           +  A+  L   L  DPT+R+S    L HPY
Sbjct: 256 SSPALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 95.5 bits (237), Expect = 3e-22
 Identities = 56/158 (35%), Positives = 80/158 (50%), Gaps = 3/158 (1%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR +   P K  + EVVT +YR P+IL+G+  YS  +D+W VGCIF E+   R
Sbjct: 144 KLADFGLARAKSI-PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGR 202

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF   +  +QL  I  +LGTPT E         +       +       L++ + +   
Sbjct: 203 PLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRA--DCLHNHAPRLDS 260

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHS 281
           +   LL ++L F+  KRIS   A+ HPY      R H 
Sbjct: 261 DGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIHK 298

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 93.9 bits (233), Expect = 1e-21
 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 8/148 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR+       A+T  VVT +YRAPE+L+ +  Y+  VD+WSVGCIFAE+  R+
Sbjct: 150 KLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRK 206

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF+  S V QLG I D++G P  E+           + RQ   S+S   +    +    
Sbjct: 207 PLFRGSSDVDQLGKILDVIGLPGEEDWPR-----DVALPRQAFHSKSAQPIEKFVTDIDE 261

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPY 271
               LL++ L F+P KRIS  SAL HPY
Sbjct: 262 LGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 93.6 bits (232), Expect = 3e-21
 Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++   
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML-RQTRKSQSLSSLY------- 235
           +LF     + Q   + + LGTP PE M+      + ++  R      S   L+       
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282

Query: 236 --SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD 273
               +     +A  LL +ML  D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 91.6 bits (227), Expect = 6e-21
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 4/151 (2%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR +   P++  + EVVT +YR P++L+GA  YS+A+D+W  GCIF E+L  +
Sbjct: 143 KLADFGLARAKSI-PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ 201

Query: 184 ILFQAQSPV-QQLGLITDLLGTPTPEEMRHACDGAKCH-MLRQTRKSQSLSSLYSLSSQA 241
             F   S V +QL  I  +LG PT +                   K Q L  ++   S+ 
Sbjct: 202 PAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRP 261

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             +A  L  QML   P  RIS   AL HPY 
Sbjct: 262 P-KAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 91.6 bits (227), Expect = 9e-21
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 7/160 (4%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR +   P K  + EVVT +YR P++L+G+  YS  +D+W VGCIF E+   R
Sbjct: 144 KLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR 202

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMR--HACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
            LF   +   +L LI  LLGTPT E      + D  K +   + +    ++    L +  
Sbjct: 203 PLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDT-- 260

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHS 281
             E + LL + L ++  KRIS   A+ H Y      R HS
Sbjct: 261 --EGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRIHS 298

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 90.5 bits (224), Expect = 7e-20
 Identities = 52/169 (30%), Positives = 94/169 (55%), Gaps = 13/169 (7%)

Query: 112 RQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVT----QYYRAPEILMGARHYSAAV 167
           + L++   T++ K+CDFG A+      N    Q  V+    ++YRAPE+++GA +Y+  +
Sbjct: 199 QNLLIDPNTHTLKLCDFGSAK------NLLAGQRSVSYICSRFYRAPELMLGATNYTTHI 252

Query: 168 DVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK 227
           D+WS+GCI AE++    +F  QS V QL  I  +LGTPT ++++   +     +     K
Sbjct: 253 DLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEM-NPNYADIKFPDVK 311

Query: 228 SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
            + L  ++   +    +A++ + Q L ++P KR++   AL  P+ D+ R
Sbjct: 312 PKDLKKVFPKGTPD--DAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358

Length = 440

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 87.4 bits (216), Expect = 2e-19
 Identities = 56/149 (37%), Positives = 76/149 (51%), Gaps = 5/149 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+CDFG AR      N   T+ V T++YR+PE+L+GA  Y  AVD+WSVGCI  EL   +
Sbjct: 140 KLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQ 198

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR--QTRKSQSLSSLYSLSSQA 241
            LF  +S + QL  I  +LG    E+M+      + H LR       QSL   Y      
Sbjct: 199 PLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRY--LGIL 256

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHP 270
           +G  + L+  +L  +PT R      L HP
Sbjct: 257 SGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 85.5 bits (212), Expect = 7e-19
 Identities = 52/150 (34%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+CDFG AR     P +  T  V T++YRAPE+L+G   Y  AVD+W+VGC+  E+L   
Sbjct: 140 KLCDFGFARTLAA-PGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGE 198

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR--KSQSLSSLYSLSSQA 241
            LF   S + QL  I   LG   P   RH     K  +    R  + + +  L     + 
Sbjct: 199 PLFPGDSDIDQLYHIIKCLGNLIP---RHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKL 255

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
           +G  + L  Q L  DP  R S +  L H +
Sbjct: 256 SGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 81.6 bits (201), Expect = 3e-17
 Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 19/183 (10%)

Query: 109 QPTRQLVMYQATYSS--KICDFGLARV-EEP-DPNKAMTQEVVTQYYRAPEILMGARHYS 164
           +P   LVM +       KI D G AR+   P  P   +   VVT +YRAPE+L+GARHY+
Sbjct: 135 KPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYT 194

Query: 165 AAVDVWSVGCIFAELLGRRILF-------QAQSPVQ--QLGLITDLLGTPTPEEMRHACD 215
            A+D+W++GCIFAELL    +F       +  +P    QL  I +++G P  ++      
Sbjct: 195 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKK 254

Query: 216 GAKCHML-----RQTRKSQSL-SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH 269
             +   L     R T  + SL   +     +   +A HLL ++L  DP KRI+   A+  
Sbjct: 255 MPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314

Query: 270 PYL 272
           PY 
Sbjct: 315 PYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 80.5 bits (198), Expect = 7e-17
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 19/183 (10%)

Query: 109 QPTRQLVMYQATYSS--KICDFGLARV-EEP-DPNKAMTQEVVTQYYRAPEILMGARHYS 164
           +P   LVM +       KI D G AR+   P  P   +   VVT +YRAPE+L+GARHY+
Sbjct: 135 KPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYT 194

Query: 165 AAVDVWSVGCIFAELLGRRILF-------QAQSPVQ--QLGLITDLLGTPTP---EEMRH 212
            A+D+W++GCIFAELL    +F       +  +P    QL  I  ++G P     E++R 
Sbjct: 195 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRK 254

Query: 213 ACDGAKCH--MLRQTRKSQSLSSLYSLSSQATGEAVHLLVQ-MLYFDPTKRISVNSALCH 269
             +         R T  + SL              V LL+Q +L  DPTKRI+   AL  
Sbjct: 255 MPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314

Query: 270 PYL 272
           PY 
Sbjct: 315 PYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 74.0 bits (181), Expect = 9e-15
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 6/165 (3%)

Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           Q ++   T   K+ DFGLAR +   P+   + EVVT +YR P++L+G+  YS  +D+W V
Sbjct: 132 QNLLISDTGELKLADFGLARAKSV-PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGV 190

Query: 173 GCIFAELLGRRILFQAQSPVQ-QLGLITDLLGTPTPEEMR--HACDGAKCHMLRQTRKSQ 229
           GCIF E++     F     +Q QL  I  +LGTP  +     H+    K          +
Sbjct: 191 GCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERF-TLYSPK 249

Query: 230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
           +L   ++  S     A  L  ++L   P  R+S  +AL H Y  +
Sbjct: 250 NLRQAWNKLSYVN-HAEDLASKLLQCFPKNRLSAQAALSHEYFSD 293

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
           K+ DFGL+++   D +  +   V T  Y APE+L+G  +YS   D+WS+G I  EL
Sbjct: 133 KLADFGLSKLLTSDKSL-LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 26/30 (86%), Positives = 28/30 (93%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + LKYLHSA ILHRDIKPGNLLVNSNC+LK
Sbjct: 114 RGLKYLHSAGILHRDIKPGNLLVNSNCVLK 143

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 66.4 bits (163), Expect = 3e-12
 Identities = 21/28 (75%), Positives = 25/28 (89%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           LKYLHSA ++HRD+KP N+LVNSNC LK
Sbjct: 116 LKYLHSANVIHRDLKPSNILVNSNCDLK 143

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 66.5 bits (163), Expect = 7e-12
 Identities = 34/60 (56%), Positives = 48/60 (80%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           KK  KK +K  EK ++K+++EKK+K+KK    KKK+EE+++EK+KKEEE+ EEEEE EEE
Sbjct: 406 KKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEE 465

Length = 482

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 64.1 bits (157), Expect = 2e-11
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 16/58 (27%)

Query: 338 EEMHK-FIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           E++HK +I  QL                K+LKY+HS  ++HRD+KP N+L+NS+C +K
Sbjct: 105 EDVHKRYIMYQL---------------LKALKYIHSGNVIHRDLKPSNILLNSDCRVK 147

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 64.9 bits (159), Expect = 2e-11
 Identities = 32/62 (51%), Positives = 49/62 (79%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            KK +K  EK ++K++E+KK++KKK    KKKE++++EEK+K++++KEEEE E EEE EE
Sbjct: 409 TKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEE 468

Query: 61  EG 62
           E 
Sbjct: 469 EE 470

Length = 482

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 34/60 (56%), Positives = 46/60 (76%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
            KK  KK KK  +K EKK++E+KK++KKK    KKKEE+++E+K+K+EEE EEEEE  EE
Sbjct: 405 SKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEE 464

Length = 482

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 63.7 bits (156), Expect = 2e-11
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 35/150 (23%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG+++V     + A T  V T YY +PE+      Y+   D+WS+GC+  EL   +
Sbjct: 143 KLGDFGISKVLSSTVDLAKTV-VGTPYYLSPELCQNKP-YNYKSDIWSLGCVLYELCTLK 200

Query: 184 ILFQAQSPVQQLGLITDLL-GTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
             F+ ++    L L   +L G   P                       + S YS      
Sbjct: 201 HPFEGEN---LLELALKILKGQYPP-----------------------IPSQYS------ 228

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            E  +L+  +L  DP +R S+   L  P++
Sbjct: 229 SELRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 63.6 bits (153), Expect = 4e-11
 Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 26/162 (16%)

Query: 124 KICDFGLARV-----EEPDPNKAMTQEVVTQYYRAPEILMG--ARHYSAAVDVWSVGCIF 176
           K+ DFGLA++              +  V T  Y APE+L+G    + S++ D+WS+G   
Sbjct: 142 KLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITL 201

Query: 177 AELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS 236
            ELL     F+ +                               +L     S +     S
Sbjct: 202 YELLTGLPPFEGEKNSSAT-------------------SQTLKIILELPTPSLASPLSPS 242

Query: 237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
                +  A  LL ++L  DP  R+S +S L H  L   +L+
Sbjct: 243 NPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLK 284

Length = 384

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 20/28 (71%), Positives = 25/28 (89%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           LKY+HSA +LHRD+KP NLL+N+NC LK
Sbjct: 121 LKYIHSANVLHRDLKPSNLLLNANCDLK 148

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 18/28 (64%), Positives = 24/28 (85%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           LKY+HSA ++HRD+KP NLLVN +C L+
Sbjct: 120 LKYIHSANVIHRDLKPSNLLVNEDCELR 147

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3

 Score = 62.2 bits (151), Expect = 1e-10
 Identities = 36/100 (36%), Positives = 61/100 (61%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           EK+KE+ KE+KK+KK++ K++ K +K K++ KEK+  +EK+KEK+KK EE  + EEE + 
Sbjct: 107 EKEKEQVKEEKKKKKEKPKEEPKDRKPKEEAKEKRPPKEKEKEKEKKVEEPRDREEEKKR 166

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDS 100
           E  R + R ++  KK+   K+    +  K  + +      
Sbjct: 167 ERVRAKSRPKKPPKKKPPNKKKEPPEEEKQRQAAREAVKG 206

This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 28/60 (46%), Positives = 45/60 (75%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
             K+  K+ KK  +K +KK+E++KKEKKKK    KK+E+++E++K+++EE +EEEE E E
Sbjct: 404 GSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAE 463

Length = 482

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3

 Score = 62.2 bits (151), Expect = 2e-10
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            K +  K+E+K++++ +++KK+KK+K K++ K++K KEE K+++  KE+E+ +E++  E 
Sbjct: 98  PKNESGKEEEKEKEQVKEEKKKKKEKPKEEPKDRKPKEEAKEKRPPKEKEKEKEKKVEEP 157

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFK 89
             R   ++R R R K R KK   ++ P K
Sbjct: 158 RDREEEKKRERVRAKSRPKKPPKKKPPNK 186

This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3

 Score = 60.7 bits (147), Expect = 4e-10
 Identities = 34/100 (34%), Positives = 62/100 (62%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E  KE++KEK++ K+++KKKKEK K+E K +K K++ +EK+  K+K++E+E + EE  + 
Sbjct: 101 ESGKEEEKEKEQVKEEKKKKKEKPKEEPKDRKPKEEAKEKRPPKEKEKEKEKKVEEPRDR 160

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDS 100
           E  ++R R R + + ++  K+    K  +  E    R  +
Sbjct: 161 EEEKKRERVRAKSRPKKPPKKKPPNKKKEPPEEEKQRQAA 200

This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|219924 pfam08597, eIF3_subunit, Translation initiation factor eIF3 subunit

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 9   EKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRR 68
           E+ +EK++EK K   K K KK  K K +++EK K +K+++     EE+  E+E   + R 
Sbjct: 40  EEDEEKEEEKAKVAAKAKAKKALKAKIEEKEKAKREKEEKGLRELEEDTPEDELAEKLRL 99

Query: 69  RR 70
           R+
Sbjct: 100 RK 101

This is a family of proteins which are subunits of the eukaryotic translation initiation factor 3 (eIF3). In yeast it is called Hcr1. The Saccharomyces cerevisiae protein eIF3j (HCR1) has been shown to be required for processing of 20S pre-rRNA and binds to 18S rRNA and eIF3 subunits Rpg1p and Prt1p. Length = 242

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 60.3 bits (147), Expect = 6e-10
 Identities = 28/61 (45%), Positives = 50/61 (81%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            KK  +K EKK+E++K++KKK+    +KK+++E+++KE+K++EK+++EEE  EE+EE EE
Sbjct: 412 IKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEEEEE 471

Query: 61  E 61
           +
Sbjct: 472 K 472

Length = 482

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 60.3 bits (147), Expect = 6e-10
 Identities = 27/59 (45%), Positives = 48/59 (81%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGE 59
             +K +KK ++++K+K+KK    KKKE+++++EK+KKEE+K+E++++ EEE EEEEE +
Sbjct: 415 IVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEEEEEKK 473

Length = 482

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 59.1 bits (144), Expect = 6e-10
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-G 181
           K+ DFG A+          T  V  T Y+ APE++ G   Y  A D+WS+GC   E+  G
Sbjct: 141 KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVIEMATG 199

Query: 182 RRILFQAQSPVQQLGLITDLLGTP 205
           +    +  +P+  L  I      P
Sbjct: 200 KPPWSELGNPMAALYKIGSSGEPP 223

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 59.7 bits (145), Expect = 7e-10
 Identities = 21/28 (75%), Positives = 26/28 (92%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           LKY+HSA +LHRD+KPGNLLVN++C LK
Sbjct: 118 LKYIHSANVLHRDLKPGNLLVNADCELK 145

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 59.9 bits (146), Expect = 8e-10
 Identities = 25/59 (42%), Positives = 51/59 (86%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGE 59
           EK ++K++E+KKEKKK+    +KK++E++++KEKK++E++++E++ +EE+E EEE++ +
Sbjct: 417 EKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEEEEEKKKK 475

Length = 482

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 37/151 (24%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLA+    + ++  T    T  Y APE+L+G   Y  AVD WS+G +  E+L  +
Sbjct: 133 KLTDFGLAKELSSEGSRTNTF-CGTPEYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGK 190

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F A                   +E+                    L     LS     
Sbjct: 191 PPFYA----------------EDRKEIYE------------KILKDPLRFPEFLSP---- 218

Query: 244 EAVHLLVQMLYFDPTKRISVNSALC---HPY 271
           EA  L+  +L  DPTKR+    A     HP+
Sbjct: 219 EARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 59.2 bits (144), Expect = 9e-10
 Identities = 20/28 (71%), Positives = 25/28 (89%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           LKY+HSA +LHRD+KP NLL+N+NC LK
Sbjct: 119 LKYIHSANVLHRDLKPSNLLLNTNCDLK 146

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 59.9 bits (146), Expect = 9e-10
 Identities = 31/80 (38%), Positives = 49/80 (61%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           ++E +     +K  +K KK  +K EKK+++EKK+K++K    KKKEEEE EE+E+ EEE 
Sbjct: 396 EEEIEFLTGSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEK 455

Query: 63  RRRRRRRRRRRKKEREKKRS 82
                     +++E EKK+ 
Sbjct: 456 EEEEEEAEEEKEEEEEKKKK 475

Length = 482

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 59.9 bits (146), Expect = 9e-10
 Identities = 27/61 (44%), Positives = 47/61 (77%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +  K+ KK  +K +KK +++K++KKK+    K+K+++EE++KEKK++E+EE EEE E E+
Sbjct: 407 KATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEK 466

Query: 61  E 61
           E
Sbjct: 467 E 467

Length = 482

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 57.5 bits (140), Expect = 2e-09
 Identities = 17/28 (60%), Positives = 22/28 (78%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L Y HS RILHRD+KP N+L+N + +LK
Sbjct: 111 LAYCHSHRILHRDLKPQNILINRDGVLK 138

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 23/61 (37%), Positives = 48/61 (78%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +K  +K K+  ++ +K++++++K+KK+K    +KK++EE+++++KK+EE+E EEEE  EE
Sbjct: 406 KKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEE 465

Query: 61  E 61
           +
Sbjct: 466 K 466

Length = 482

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 3/89 (3%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEG---EEEEEG 58
            K +  KE K E  KE++K++++ KE+KKKK++K KEE K  K K+E +E    +E+E+ 
Sbjct: 90  AKTKPAKEPKNESGKEEEKEKEQVKEEKKKKKEKPKEEPKDRKPKEEAKEKRPPKEKEKE 149

Query: 59  EEEGRRRRRRRRRRRKKEREKKRSSRRKP 87
           +E+     R R   +K+ER + +S  +KP
Sbjct: 150 KEKKVEEPRDREEEKKRERVRAKSRPKKP 178

This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 58.0 bits (141), Expect = 3e-09
 Identities = 24/74 (32%), Positives = 50/74 (67%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
             KK  KK +K  EK +K++++++K+KKK+    ++K++E+++++E++ EE+EE EEE  
Sbjct: 404 GSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAE 463

Query: 64  RRRRRRRRRRKKER 77
             +     ++KK+ 
Sbjct: 464 EEKEEEEEKKKKQA 477

Length = 482

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 56.8 bits (138), Expect = 4e-09
 Identities = 14/31 (45%), Positives = 23/31 (74%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
             +L+YLHS  I+HRD+KP N+L++ +  +K
Sbjct: 107 LSALEYLHSKGIVHRDLKPENILLDEDGHVK 137

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 56.9 bits (138), Expect = 5e-09
 Identities = 18/30 (60%), Positives = 24/30 (80%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + LKY+HSA I+HRD+KP N+ VN +C LK
Sbjct: 129 RGLKYIHSAGIIHRDLKPSNIAVNEDCELK 158

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 36/152 (23%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
            I DF +A    PD    +T     T  Y APE+L   + YS AVD WS+G    E L  
Sbjct: 140 HITDFNIATKVTPD---TLTTSTSGTPGYMAPEVLC-RQGYSVAVDWWSLGVTAYECLRG 195

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
           +  ++  S             T   +++R           +Q        + +S      
Sbjct: 196 KRPYRGHS------------RTIR-DQIRA----------KQETADVLYPATWST----- 227

Query: 243 GEAVHLLVQMLYFDPTKRISVN--SALCHPYL 272
            EA+  + ++L  DP KR+  N      HPY 
Sbjct: 228 -EAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3

 Score = 56.8 bits (137), Expect = 9e-09
 Identities = 21/83 (25%), Positives = 51/83 (61%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           K+ +K   K    K K  KE K +  K+++++K++ +++K+KKK++ +E  ++ + +EE 
Sbjct: 78  KRVEKGGSKGPAAKTKPAKEPKNESGKEEEKEKEQVKEEKKKKKEKPKEEPKDRKPKEEA 137

Query: 63  RRRRRRRRRRRKKEREKKRSSRR 85
           + +R  + + ++KE++ +    R
Sbjct: 138 KEKRPPKEKEKEKEKKVEEPRDR 160

This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 57.1 bits (137), Expect = 1e-08
 Identities = 21/86 (24%), Positives = 46/86 (53%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E KK+    KKK ++ +K  +  K + +    E +  EEK +  +KK+EE  ++ +  ++
Sbjct: 1326 EAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKK 1385

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRK 86
            +   +++    ++K E +KK++   K
Sbjct: 1386 KAEEKKKADEAKKKAEEDKKKADELK 1411

Length = 2084

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 41/149 (27%), Positives = 56/149 (37%), Gaps = 33/149 (22%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLA++   D + A T  V T YY +PE L     Y    D+WS+GC+  EL    
Sbjct: 150 KLGDFGLAKILGHDSSFAKTY-VGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIYELCALS 207

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F A++ +Q    I +      P                  R S  L+ +         
Sbjct: 208 PPFTARNQLQLASKIKEGKFRRIPY-----------------RYSSELNEVIKS------ 244

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                   ML  DP KR S    L  P +
Sbjct: 245 --------MLNVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|236877 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEE 50
           EKK  K  +K   K+ EKK+KEK+K + KK+    K   K+++     EE
Sbjct: 385 EKKTGKPSKKVLAKRAEKKEKEKEKPKVKKRHRDTKNIGKRRKPSGTSEE 434

Length = 434

>gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742)

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 22/109 (20%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E +K KK+ ++K+K K KKKK KKKK+K K K+  KK++K ++K +KE E+  E+     
Sbjct: 70  EIEKVKKEYEEKQKWKWKKKKSKKKKDKDKDKKDDKKDDKSEKKDEKEAEDKLEDLTKSY 129

Query: 61  EG----------------------RRRRRRRRRRRKKEREKKRSSRRKP 87
                                   R  R+RR    KKE E+ ++    P
Sbjct: 130 SETLSTLSELKPRKYALHKDIYQSRLDRKRRAEVAKKEAEELQNPGFFP 178

This is a family of fungal proteins of unknown function. Length = 182

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 37/151 (24%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           K+ DFG++++   +   +M + VV T YY +PE+  G + Y+   D+W++GC+  ELL  
Sbjct: 141 KLGDFGISKILGSE--YSMAETVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTL 197

Query: 183 RILFQAQSPVQQLGLITDLL-GTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
           +  F A +P   L L+  ++ G  TP                               S  
Sbjct: 198 KRTFDATNP---LNLVVKIVQGNYTPVV-----------------------------SVY 225

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           + E + L+  +L  DP KR + +  L  P L
Sbjct: 226 SSELISLVHSLLQQDPEKRPTADEVLDQPLL 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAF-----KSLKYLHSARILHRDIKPGNLLVNSN 390
           V E M   + + +   +  L       ++     + L + HS  ILHRD+KP NLL+N+ 
Sbjct: 76  VFEFMDTDLYKLIKDRQRGLP-ESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE 134

Query: 391 CILK 394
            +LK
Sbjct: 135 GVLK 138

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|219924 pfam08597, eIF3_subunit, Translation initiation factor eIF3 subunit

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRR 64
           E+ +EK++EK K   K + KK  K K +EK+K + +K+EK  +E EE   E+E  E+ R 
Sbjct: 40  EEDEEKEEEKAKVAAKAKAKKALKAKIEEKEKAKREKEEKGLRELEEDTPEDELAEKLRL 99

Query: 65  RR 66
           R+
Sbjct: 100 RK 101

This is a family of proteins which are subunits of the eukaryotic translation initiation factor 3 (eIF3). In yeast it is called Hcr1. The Saccharomyces cerevisiae protein eIF3j (HCR1) has been shown to be required for processing of 20S pre-rRNA and binds to 18S rRNA and eIF3 subunits Rpg1p and Prt1p. Length = 242

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 54.1 bits (131), Expect = 3e-08
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L YLHS  I+HRDIK  N+LV+S+ ++K
Sbjct: 114 LAYLHSNGIVHRDIKGANILVDSDGVVK 141

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742)

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)

Query: 2   KKKEKKKEKKKEKKK-EKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
           KKKE  +E +K KK+ E+K+K K KK+K KKK+ K K++K  +K  K E++ E+E E
Sbjct: 63  KKKELAEEIEKVKKEYEEKQKWKWKKKKSKKKKDKDKDKKDDKKDDKSEKKDEKEAE 119

This is a family of fungal proteins of unknown function. Length = 182

>gnl|CDD|236877 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional

 Score = 54.6 bits (132), Expect = 4e-08
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEE 56
           K   +K+  K  KK   K+ +KK+++K+K + KK+    K   K+ +  G  EE
Sbjct: 381 KAPSEKKTGKPSKKVLAKRAEKKEKEKEKPKVKKRHRDTKNIGKRRKPSGTSEE 434

Length = 434

>gnl|CDD|220383 pfam09756, DDRGK, DDRGK domain

 Score = 52.8 bits (127), Expect = 4e-08
 Identities = 27/81 (33%), Positives = 59/81 (72%)

Query: 3  KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
          KK   K++ K ++K+ ++++++ +E+++++ KK +E+++ E+K++EE E E E++ EEE 
Sbjct: 1  KKIGAKKRAKLEEKQARRQQREAEEEEREERKKLEEKREGERKEEEELEEEREKKKEEEE 60

Query: 63 RRRRRRRRRRRKKEREKKRSS 83
          R+ R  + R+ ++E EK +SS
Sbjct: 61 RKEREEQARKEQEEYEKLKSS 81

This is a family of proteins of approximately 300 residues, found in plants and vertebrates. They contain a highly conserved DDRGK motif. Length = 189

>gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated

 Score = 54.9 bits (133), Expect = 4e-08
 Identities = 17/87 (19%), Positives = 36/87 (41%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E +KE+ K + +E+ K + ++    + +++ K +       +E  +            E+
Sbjct: 42  EARKEEAKREAEEEAKAEAEEAAAAEAEEEAKAEAAAAAPAEEAAEAAAAAEAAARPAED 101

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKP 87
           E  R      RR K ++  K+    KP
Sbjct: 102 EAARPAEAAARRPKAKKAAKKKKGPKP 128

Length = 746

>gnl|CDD|219924 pfam08597, eIF3_subunit, Translation initiation factor eIF3 subunit

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+ +EK++EK K   K K KK  K K ++K+K K++KEEK   +    EE+  E+E  E+
Sbjct: 40  EEDEEKEEEKAKVAAKAKAKKALKAKIEEKEKAKREKEEKGLREL---EEDTPEDELAEK 96

Query: 61  EGRRR 65
              R+
Sbjct: 97  LRLRK 101

This is a family of proteins which are subunits of the eukaryotic translation initiation factor 3 (eIF3). In yeast it is called Hcr1. The Saccharomyces cerevisiae protein eIF3j (HCR1) has been shown to be required for processing of 20S pre-rRNA and binds to 18S rRNA and eIF3 subunits Rpg1p and Prt1p. Length = 242

>gnl|CDD|236877 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional

 Score = 54.2 bits (131), Expect = 5e-08
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
            +K+  K  KK   K  +KKEK+K++ K KK  +  +   K +K     E
Sbjct: 384 SEKKTGKPSKKVLAKRAEKKEKEKEKPKVKKRHRDTKNIGKRRKPSGTSE 433

Length = 434

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 54.8 bits (131), Expect = 6e-08
 Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 2    KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK-EKKKKEEEEGEEEEEGEE 60
            ++ +K  E  K + +    + +  +EK +  EKKK+E KKK +  KK+ EE ++ +E ++
Sbjct: 1339 EEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKK 1398

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRK 86
            +    +++    +K    KK++   K
Sbjct: 1399 KAEEDKKKADELKKAAAAKKKADEAK 1424

Length = 2084

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 53.3 bits (128), Expect = 7e-08
 Identities = 18/30 (60%), Positives = 25/30 (83%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + LKY+HSA ++HRD+KP N+L+N NC LK
Sbjct: 119 RGLKYVHSAGVVHRDLKPSNILINENCDLK 148

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 53.8 bits (130), Expect = 7e-08
 Identities = 25/71 (35%), Positives = 44/71 (61%)

Query: 14  KKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRR 73
            KK  KK +K  ++ +KK+E++KKE+KKK    K++EE EEEE+ ++E  +         
Sbjct: 405 SKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEE 464

Query: 74  KKEREKKRSSR 84
           +KE E+++  +
Sbjct: 465 EKEEEEEKKKK 475

Length = 482

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 54.4 bits (130), Expect = 8e-08
 Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)

Query: 2    KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE---KKKKEEKKK--EKKKKEEEEGEEEE 56
            K + +    + E  +EK +  +KKKE+ KKK    KKK EEKKK  E KKK EE+ ++ +
Sbjct: 1349 KAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD 1408

Query: 57   EGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            E ++    +++    ++K E +KK    +K
Sbjct: 1409 ELKKAAAAKKKADEAKKKAEEKKKADEAKK 1438

Length = 2084

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3

 Score = 53.7 bits (129), Expect = 9e-08
 Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 3/149 (2%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+KK ++   K   KK  KKK   KK++  ++EK+++  ++  K K EE +  EE E EE
Sbjct: 162 EEKKRERVRAKSRPKKPPKKKPPNKKKEPPEEEKQRQAAREAVKGKPEEPDVNEEREKEE 221

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT 120
           +  + R       +++  ++ S   +    S        S           R     + +
Sbjct: 222 DDGKDRETTTSPMEEDESRQSSEISRRSSSSLKKPDPSPSMASPETRESSKRTETRPRTS 281

Query: 121 YSSKICDFGLARVEEPDPNKAMTQEVVTQ 149
                     AR   P P +   +E+VT 
Sbjct: 282 LRPPSARPASAR---PAPPRVKRKEIVTV 307

This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated

 Score = 53.7 bits (130), Expect = 9e-08
 Identities = 25/92 (27%), Positives = 46/92 (50%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
               E      +++     +   ++ + KK  +KKK  + KK+K K++   G +  +G +
Sbjct: 89  AAAAEAAARPAEDEAARPAEAAARRPKAKKAAKKKKGPKPKKKKPKRKAARGGKRGKGGK 148

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSE 92
             RRRR RRRRR+KK+++K      +   + E
Sbjct: 149 GRRRRRGRRRRRKKKKKQKPTEKIPREVVIPE 180

Length = 746

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 15/53 (28%)

Query: 342 KFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           K   +QL                + L+YLHS  ILHRDIK  N+L+N++ +LK
Sbjct: 103 KCYMKQL---------------LEGLQYLHSNGILHRDIKGSNILINNDGVLK 140

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 15/31 (48%), Positives = 24/31 (77%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + L+YLHS  I+HRD+KP N+L++ N ++K
Sbjct: 108 LRGLEYLHSNGIIHRDLKPENILLDENGVVK 138

Length = 260

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 53.4 bits (129), Expect = 1e-07
 Identities = 22/72 (30%), Positives = 42/72 (58%)

Query: 14  KKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRR 73
             K+  KK KK  EK +KK +++K+EKKK+    +++E EEEEE E++   +        
Sbjct: 404 GSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAE 463

Query: 74  KKEREKKRSSRR 85
           +++ E++   ++
Sbjct: 464 EEKEEEEEKKKK 475

Length = 482

>gnl|CDD|219924 pfam08597, eIF3_subunit, Translation initiation factor eIF3 subunit

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 17/64 (26%), Positives = 40/64 (62%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRR 64
           +++++++KE++K K   + K K+  K K ++K++ K+++++K   E  E+  E E   + 
Sbjct: 38  DEEEDEEKEEEKAKVAAKAKAKKALKAKIEEKEKAKREKEEKGLRELEEDTPEDELAEKL 97

Query: 65  RRRR 68
           R R+
Sbjct: 98  RLRK 101

This is a family of proteins which are subunits of the eukaryotic translation initiation factor 3 (eIF3). In yeast it is called Hcr1. The Saccharomyces cerevisiae protein eIF3j (HCR1) has been shown to be required for processing of 20S pre-rRNA and binds to 18S rRNA and eIF3 subunits Rpg1p and Prt1p. Length = 242

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 53.2 bits (127), Expect = 2e-07
 Identities = 21/85 (24%), Positives = 46/85 (54%)

Query: 2    KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
            KKK ++ +KK +  K+K ++ KK  E  K + +   +E +  ++K E  E ++EE  ++ 
Sbjct: 1321 KKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKA 1380

Query: 62   GRRRRRRRRRRRKKEREKKRSSRRK 86
               +++   +++  E +KK    +K
Sbjct: 1381 DAAKKKAEEKKKADEAKKKAEEDKK 1405

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 53.2 bits (127), Expect = 2e-07
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 6/92 (6%)

Query: 1    EKKKE---KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEE---KKKEKKKKEEEEGEE 54
            E KK     K E +    + +  +EK +  +KKK+E KKK +   KK E+KKK +E  ++
Sbjct: 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKK 1399

Query: 55   EEEGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
             EE +++    ++    ++K +  KK++  +K
Sbjct: 1400 AEEDKKKADELKKAAAAKKKADEAKKKAEEKK 1431

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 52.8 bits (126), Expect = 2e-07
 Identities = 29/86 (33%), Positives = 52/86 (60%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E KK ++++KK E+ K+K+ +EKKK E+ KK E++ K +  +E KK EE++ + EE  + 
Sbjct: 1624 ELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKA 1683

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRK 86
            E   ++     +++ E  KK    +K
Sbjct: 1684 EEDEKKAAEALKKEAEEAKKAEELKK 1709

Length = 2084

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 51.9 bits (125), Expect = 2e-07
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 8/64 (12%)

Query: 124 KICDFGLARV-------EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIF 176
           K+ DFGL++V          D  K   + V T  Y APE+++G + +S  VD WS+GCI 
Sbjct: 133 KLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCIL 191

Query: 177 AELL 180
            E L
Sbjct: 192 YEFL 195

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 26/50 (52%), Positives = 40/50 (80%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
            K EK+ E ++E+KKEKKKK++ KKEKK+KK+KK+K  + K  KKK++++
Sbjct: 141 AKVEKEAEVEEEEKKEKKKKKEVKKEKKEKKDKKEKMVEPKGSKKKKKKK 190

5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 52.5 bits (125), Expect = 3e-07
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK--EKKKKEEEEGEEEEEG 58
            +  +E KK ++ +KK E+ KK ++ ++K  +  KK+ EE KK  E KKKE EE ++ EE 
Sbjct: 1662 KAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEEL 1721

Query: 59   EEEGRRRRRRRRRRRKKEREKKRSS 83
            ++     + +    +K+  E K+ +
Sbjct: 1722 KKAEEENKIKAEEAKKEAEEDKKKA 1746

Length = 2084

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 34/149 (22%)

Query: 124 KICDFGLA-RVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           K+ DFGL+ ++ +      M   V T Y+ APE++ G + Y    D+WS+G    EL   
Sbjct: 138 KLIDFGLSAQLSDTKARNTM---VGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEG 193

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
           +  +    P++ L  I        P                          L +   + +
Sbjct: 194 KPPYSELPPMKALFKIATN---GPPG-------------------------LRN-PEKWS 224

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPY 271
            E    L + L  +P KR +    L HP+
Sbjct: 225 DEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 16/30 (53%), Positives = 22/30 (73%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           K L+YLHS  I+HRDIK  N+L+ S+  +K
Sbjct: 109 KGLEYLHSNGIIHRDIKAANILLTSDGEVK 138

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 17/28 (60%), Positives = 24/28 (85%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 131 IKHLHSAGIIHRDLKPSNIVVKSDCTLK 158

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 51.1 bits (122), Expect = 4e-07
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 15/74 (20%)

Query: 321 PFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDI 380
           PF  T   KL   +++ E+  +F+  Q+                K LKY+H+A I+HRD+
Sbjct: 100 PFMGTDLGKLMKHEKLSEDRIQFLVYQM---------------LKGLKYIHAAGIIHRDL 144

Query: 381 KPGNLLVNSNCILK 394
           KPGNL VN +C LK
Sbjct: 145 KPGNLAVNEDCELK 158

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 51.5 bits (124), Expect = 4e-07
 Identities = 26/70 (37%), Positives = 41/70 (58%)

Query: 18  KKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKER 77
            KK  KK K+  +K EKK++EEKK++KKK    + +EEEE EE+ ++   +     + E 
Sbjct: 405 SKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEE 464

Query: 78  EKKRSSRRKP 87
           EK+    +K 
Sbjct: 465 EKEEEEEKKK 474

Length = 482

>gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 25/46 (54%), Positives = 38/46 (82%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKK 46
           E ++E+KKEKKK+K+ +K+KKEKK K++K  + K  K++KKK+KKK
Sbjct: 148 EVEEEEKKEKKKKKEVKKEKKEKKDKKEKMVEPKGSKKKKKKKKKK 193

5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193

>gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 24/47 (51%), Positives = 39/47 (82%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           E + E++++K+K+KKKE KK++K+KK+KK+K  + K  +KKK+KKKK
Sbjct: 146 EAEVEEEEKKEKKKKKEVKKEKKEKKDKKEKMVEPKGSKKKKKKKKK 192

5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 36/151 (23%)

Query: 124 KICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           K+ DFG+A+ V E    K+      + Y+ APE++     Y  A D+WS+GC   E+   
Sbjct: 142 KLADFGMAKQVVEFSFAKSF---KGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATG 198

Query: 183 RILFQAQSPVQQLGLITDLLGTP-TPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
           +  +     V  +  I      P  P+                            LS +A
Sbjct: 199 KPPWSQLEGVAAVFKIGRSKELPPIPD---------------------------HLSDEA 231

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  +++ L  DP+ R +    L HP++
Sbjct: 232 K----DFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|233467 TIGR01554, major_cap_HK97, phage major capsid protein, HK97 family

 Score = 51.2 bits (123), Expect = 4e-07
 Identities = 15/86 (17%), Positives = 35/86 (40%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
          ++ +E   E  KE +K  + ++  + E++K +    KEE  K   + +  E   +E   +
Sbjct: 2  KELREALAELAKELRKLTEDEKLAEAEEEKAEYDALKEEIDKLDAEIDRLEELLDELEAK 61

Query: 61 EGRRRRRRRRRRRKKEREKKRSSRRK 86
                       ++E + + +  R 
Sbjct: 62 PAASGEGGGGEEEEEEAKAEAAEFRA 87

This model family represents the major capsid protein component of the heads (capsids) of bacteriophage HK97, phi-105, P27, and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease [Mobile and extrachromosomal element functions, Prophage functions]. Length = 384

>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168)

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKK--KEKKKKEEEEGEEEEEG 58
           ++K+E+KK K +EK  +K+ K +KKK+KKKKK+K KK  KK  KE  K  EE  +EEEEG
Sbjct: 69  QQKREEKKRKDEEKTAKKRAKRQKKKQKKKKKKKAKKGNKKEEKEGSKSSEESSDEEEEG 128

Query: 59  EEEG 62
           EE+ 
Sbjct: 129 EEDK 132

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 142

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 51.1 bits (123), Expect = 5e-07
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query: 18  KKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKER 77
             KK  KK +K  +K +KK+EE+KKEKKKK     ++EEE EEE  ++   +    ++  
Sbjct: 404 GSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAE 463

Query: 78  EKKRSSRRKP 87
           E+K     K 
Sbjct: 464 EEKEEEEEKK 473

Length = 482

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 51.1 bits (123), Expect = 5e-07
 Identities = 21/71 (29%), Positives = 42/71 (59%)

Query: 16  KEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKK 75
             KK  +K KK  +K ++K+++E+K+K+KK    ++ EEEEE E+E +   +       +
Sbjct: 404 GSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAE 463

Query: 76  EREKKRSSRRK 86
           E +++   ++K
Sbjct: 464 EEKEEEEEKKK 474

Length = 482

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3

 Score = 51.0 bits (122), Expect = 5e-07
 Identities = 27/99 (27%), Positives = 57/99 (57%), Gaps = 2/99 (2%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           +K   K    K K  ++ K E  K+E+K+K++ K++++KKKEK K+E ++ + +EE +E+
Sbjct: 81  EKGGSKGPAAKTKPAKEPKNESGKEEEKEKEQVKEEKKKKKEKPKEEPKDRKPKEEAKEK 140

Query: 62  GRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDS 100
             R  + + + ++K+ E+ R    +  +    + +RP  
Sbjct: 141 --RPPKEKEKEKEKKVEEPRDREEEKKRERVRAKSRPKK 177

This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 17/61 (27%), Positives = 37/61 (60%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           + ++  + E+ KE++KE    E K+ +   +KE ++ EE+ +E+ ++  +E E+E E + 
Sbjct: 55  DDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEESSDENEKETEEKT 114

Query: 61  E 61
           E
Sbjct: 115 E 115

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 16/56 (28%)

Query: 336 VKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSAR-ILHRDIKPGNLLVNSN 390
           + E +  +IA Q+                K L YLH+ R I+HRDIKP NLL+NS 
Sbjct: 96  IPEPVLAYIARQI---------------LKGLDYLHTKRHIIHRDIKPSNLLINSK 136

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 50.9 bits (121), Expect = 8e-07
 Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 9/120 (7%)

Query: 2    KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE---- 57
            KKK ++ +KK ++ K+  + +KK  E KK +E KK +E KK ++ K+ +E ++ EE    
Sbjct: 1489 KKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKA 1548

Query: 58   -----GEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTR 112
                  EE  +   +++    KK  E K  + RK  +  +    R +  +  Y+  +  +
Sbjct: 1549 DELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK 1608

Length = 2084

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 16/30 (53%), Positives = 21/30 (70%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           K L+YLHS + +HRDIK GN+L+N     K
Sbjct: 110 KGLEYLHSNKKIHRDIKAGNILLNEEGQAK 139

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 50.9 bits (121), Expect = 9e-07
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKK--EEKKKEKKKKEEEEGEEEEEG 58
            EKKK  + +KK E+ K+  + +KK +E KK +E KKK  E KK ++ KK+ EE ++ +E 
Sbjct: 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEA 1488

Query: 59   EEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            +++    +++    +K    KK++   K
Sbjct: 1489 KKKAEEAKKKADEAKKAAEAKKKADEAK 1516

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 50.9 bits (121), Expect = 9e-07
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 1    EKKKEKKKEKKKEKKK--EKKKKEKKKKE---KKKKKEKKKKEEKKK---EKKKKEEEEG 52
             +    + E  +EK +  EKKK+E KKK    KKK +EKKK +E KK   E KKK +E  
Sbjct: 1352 AEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELK 1411

Query: 53   EEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            +     ++    +++   +++  E +KK    +K
Sbjct: 1412 KAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK 1445

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 50.9 bits (121), Expect = 9e-07
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKE--KKKKKEKKKKEE--KKKEKKKKEEEEGEEEE 56
            ++ K+K +E KK  + +KK +E KK E  KKK +E KK +E  KK E+ KK +E  ++ E
Sbjct: 1434 DEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE 1493

Query: 57   EGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            E +++    ++    ++K +  KK    +K
Sbjct: 1494 EAKKKADEAKKAAEAKKKADEAKKAEEAKK 1523

Length = 2084

>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1

 Score = 50.3 bits (121), Expect = 9e-07
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEE 50
           E+KK +KK++K EKK EK++ EK   +KK +   KK +    E KK + +
Sbjct: 410 ERKKLRKKQRKAEKKAEKEEAEKAAAKKKAEAAAKKAKGPDGETKKVDPD 459

This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homologue of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle. Length = 516

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 20/31 (64%), Positives = 24/31 (77%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
              LKY+HSA I+HRD+KPGNL VN +C LK
Sbjct: 127 LCGLKYIHSAGIIHRDLKPGNLAVNEDCELK 157

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 50.3 bits (121), Expect = 1e-06
 Identities = 19/80 (23%), Positives = 48/80 (60%)

Query: 7   KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRR 66
           ++E +     +K  K+ KK  +K +K++++++++KK+K    +++ EEEEE +E+    +
Sbjct: 396 EEEIEFLTGSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEK 455

Query: 67  RRRRRRRKKEREKKRSSRRK 86
                  ++E+E++   ++K
Sbjct: 456 EEEEEEAEEEKEEEEEKKKK 475

Length = 482

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 49.0 bits (118), Expect = 1e-06
 Identities = 18/28 (64%), Positives = 23/28 (82%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           LKYLHS +ILHRDIKP N+ + SN ++K
Sbjct: 116 LKYLHSRKILHRDIKPQNIFLTSNGLVK 143

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 50.5 bits (120), Expect = 1e-06
 Identities = 27/93 (29%), Positives = 55/93 (59%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E+ K+ ++EKKK ++ +KK+ E+KKK ++ KK +++ + K  E+ KK EE+ ++ EE ++
Sbjct: 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKK 1682

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEI 93
                 ++     +K+  E K++   K  +  E 
Sbjct: 1683 AEEDEKKAAEALKKEAEEAKKAEELKKKEAEEK 1715

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 50.5 bits (120), Expect = 1e-06
 Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKKEKKKKEEEEGEEEEEG 58
            E KK  + +KK E+ K+K    KKK E+ KK     K + E   ++ +  EE+ E  E+ 
Sbjct: 1313 EAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKK 1372

Query: 59   EEEGRRR----RRRRRRRRKKEREKKRSSRRK 86
            +EE +++    +++   ++K +  KK++   K
Sbjct: 1373 KEEAKKKADAAKKKAEEKKKADEAKKKAEEDK 1404

Length = 2084

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 18/62 (29%), Positives = 40/62 (64%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            KK + ++  + E+ KE++K+    ++K+ K + +K++E+ +E+ ++E+EE  +E E E 
Sbjct: 51  AKKSDDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEESSDENEKET 110

Query: 61  EG 62
           E 
Sbjct: 111 EE 112

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|219563 pfam07767, Nop53, Nop53 (60S ribosomal biogenesis)

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 22/88 (25%), Positives = 51/88 (57%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E  + + +   K  + ++K K ++ KEK++K+ +++ +E+K+ KKK  +    +E   E 
Sbjct: 260 EGFESEYEPINKPVRPKRKTKAQRNKEKRRKELEREAKEEKQLKKKLAQLARLKEIAKEV 319

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPF 88
             + + R R++ ++KER +K+  +R+  
Sbjct: 320 AQKEKARARKKEQRKERGEKKKLKRRKL 347

This nucleolar family of proteins are involved in 60S ribosomal biogenesis. They are specifically involved in the processing beyond the 27S stage of 25S rRNA maturation. This family contains sequences that bear similarity to the glioma tumour suppressor candidate region gene 2 protein (p60). This protein has been found to interact with herpes simplex type 1 regulatory proteins. Length = 387

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 25/89 (28%)

Query: 316 PSAPQPFDDTW---ERKLTSVQQV-------KEEMHKFIAEQLNTSRVPLCINPQSAAFK 365
           P + + F D +   E   + + QV         E H+F   QL                +
Sbjct: 70  PPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQL---------------LR 114

Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
           +LKY+H+A + HRD+KP N+L N++C LK
Sbjct: 115 ALKYIHTANVFHRDLKPKNILANADCKLK 143

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 50.1 bits (119), Expect = 2e-06
 Identities = 33/109 (30%), Positives = 62/109 (56%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E++K+K ++ KK++ +EKKK E+ KK +++ K K  +E KK E+ KK+ EE ++ EE E+
Sbjct: 1629 EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEK 1688

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQ 109
            +     ++     KK  E K+    +  K  E+     ++ I   +A++
Sbjct: 1689 KAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKK 1737

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.8 bits (118), Expect = 2e-06
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 6/92 (6%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKE--KKKKEKKKKKE--KKKKEEKKK--EKKKKEEEEGEE 54
            E  +EK +  +K+K++ KKK +  KKK E+KKK +  KKK EE KK  ++ KK     ++
Sbjct: 1360 EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKK 1419

Query: 55   EEEGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
             +E +++   +++    ++K E  KK    +K
Sbjct: 1420 ADEAKKKAEEKKKADEAKKKAEEAKKADEAKK 1451

Length = 2084

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 17/29 (58%), Positives = 24/29 (82%)

Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
           +L+YLHS  I+HRD+KP N+L++SN  LK
Sbjct: 105 ALEYLHSNGIIHRDLKPDNILIDSNGHLK 133

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 22/64 (34%), Positives = 45/64 (70%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            + +  +KE   + +KE + +E++KKEKKKKKE KK++++KK+KK+K  E    +++ ++
Sbjct: 130 SESETSEKETTAKVEKEAEVEEEEKKEKKKKKEVKKEKKEKKDKKEKMVEPKGSKKKKKK 189

Query: 61  EGRR 64
           + ++
Sbjct: 190 KKKK 193

5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 15/61 (24%), Positives = 38/61 (62%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +++  + +E K+E+K+    ++K+ K   +K++++ +EE ++E ++  +E  +E EE  E
Sbjct: 56  DQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEESSDENEKETEEKTE 115

Query: 61  E 61
            
Sbjct: 116 S 116

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|237744 PRK14521, rpsP, 30S ribosomal protein S16; Provisional

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 20/60 (33%), Positives = 28/60 (46%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           ++KE K   KK+K  + KK  KK   + +KK  + + E   EKK  E      EE    E
Sbjct: 108 EEKEGKVNAKKDKLSKAKKAAKKAALEAEKKVNEARAEAVAEKKAAEAAAVAAEEAAAAE 167

Length = 186

>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional

 Score = 49.4 bits (119), Expect = 2e-06
 Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKE---KKKKEEEEGEEEE- 56
             KKE   E K+E  K + + EK+ +E++ + +K +K   +KE    +K E  E  EEE 
Sbjct: 53  AIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEEL 112

Query: 57  EGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISA 95
           E +E+   ++++   ++++E E+    + +  +L  IS 
Sbjct: 113 EKKEKELEQKQQELEKKEEELEELIEEQLQ--ELERISG 149

Length = 520

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.4 bits (117), Expect = 3e-06
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEE--KKKEKKKKEEEEGEEEEEG 58
            +KK E+ K+K  E KK    K+K  + KKK +EKKK +E  KK E+ KK +E  ++ EE 
Sbjct: 1397 KKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEA 1456

Query: 59   EEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            ++    +++    ++  E +KK    +K
Sbjct: 1457 KKAEEAKKKAEEAKKADEAKKKAEEAKK 1484

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.4 bits (117), Expect = 3e-06
 Identities = 27/85 (31%), Positives = 54/85 (63%), Gaps = 2/85 (2%)

Query: 2    KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
            KK E+ K+K +E KK ++ ++K  +  KK+ E+ KK E+ K+K+ +E+++ EE ++ EEE
Sbjct: 1668 KKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEE 1727

Query: 62   GRRRRRRRRRRRKKEREKKRSSRRK 86
               + +    +++ E +KK++   K
Sbjct: 1728 --NKIKAEEAKKEAEEDKKKAEEAK 1750

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.4 bits (117), Expect = 3e-06
 Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKK-EKKKKEEEEGEEEEE 57
            EKKK  + +KK E+ K+K  + KK    KKK +  KKK EEKKK ++ KK+ EE ++ +E
Sbjct: 1389 EKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADE 1448

Query: 58   GEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
             +++    ++    ++K E  KK    +K
Sbjct: 1449 AKKKAEEAKKAEEAKKKAEEAKKADEAKK 1477

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.4 bits (117), Expect = 3e-06
 Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKK-EKKKKEEEEGEEEEE 57
            E KK+  + KK    K+K  + KKK E+KKK +  KKK EE KK ++ KK+ EE ++ EE
Sbjct: 1402 EDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEE 1461

Query: 58   GEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
             +++    ++    ++K E  KK    +K
Sbjct: 1462 AKKKAEEAKKADEAKKKAEEAKKADEAKK 1490

Length = 2084

>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1

 Score = 48.8 bits (117), Expect = 3e-06
 Identities = 17/51 (33%), Positives = 31/51 (60%)

Query: 7   KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
             E+KK +KK++K ++K +KE+ +K   KKK E   +K K  + E ++ + 
Sbjct: 408 PAERKKLRKKQRKAEKKAEKEEAEKAAAKKKAEAAAKKAKGPDGETKKVDP 458

This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homologue of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle. Length = 516

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 11/76 (14%)

Query: 114 LVMYQATYSSKICDFGLAR----VEEPDPNKAMTQEVVTQYYRAPEILMGARH-YSAAVD 168
           LV        KI DFG+++    + + D N +M   V   ++ APE++      YSA VD
Sbjct: 140 LVDADGI--CKISDFGISKKSDDIYDNDQNMSMQGSV---FWMAPEVIHSYSQGYSAKVD 194

Query: 169 VWSVGCIFAELL-GRR 183
           +WS+GC+  E+  GRR
Sbjct: 195 IWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEE--EGEEEEEGE 59
            K+      ++E K      +K KKE K  + KKK E+KKK+KK+K+E   EGE +   +
Sbjct: 35  SKEILSTFSEEENKVATTSTKKDKKEDKNNESKKKSEKKKKKKKEKKEPKSEGETKLGFK 94

Query: 60  EEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEIS 94
              + ++ +++  + K  E   ++  K  +L+E S
Sbjct: 95  TPKKSKKTKKKPPKPKPNEDVDNAFNKIAELAEKS 129

Length = 413

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.0 bits (116), Expect = 4e-06
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK--EKKKKEEEEGEEEEEG 58
            +KK +  K+K +EKKK  + K+K +++KKK  E KK    KK  ++ KK+ EE ++ +E 
Sbjct: 1377 KKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEA 1436

Query: 59   EEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            +++    ++    ++K E  KK    +K
Sbjct: 1437 KKKAEEAKKADEAKKKAEEAKKAEEAKK 1464

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.0 bits (116), Expect = 4e-06
 Identities = 26/86 (30%), Positives = 46/86 (53%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E+KK+  + KK E+KK+  + +KK +E KK  E KKK E+ K+K    +++ EE ++  E
Sbjct: 1287 EEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAE 1346

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRK 86
              +          +   EK  ++ +K
Sbjct: 1347 AAKAEAEAAADEAEAAEEKAEAAEKK 1372

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.0 bits (116), Expect = 4e-06
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKK--EKKKKKEKKKKEE-KKKEKKKKEEEEGEEEEE 57
            +K  E KK ++ +K  E KK E+ KK  E KK +EKKK +E KK E+ KK EE+ + EE 
Sbjct: 1510 KKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEA 1569

Query: 58   GEEEGRRRRRRRRRRRKKEREKKR 81
             + E  +    R+    K+ E+ R
Sbjct: 1570 KKAEEDKNMALRKAEEAKKAEEAR 1593

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 49.0 bits (116), Expect = 4e-06
 Identities = 26/86 (30%), Positives = 48/86 (55%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E KK ++ +KK E+ K+  + +KK +E KK  E KKK E+ K+K  + ++  E +++ +E
Sbjct: 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADE 1514

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRK 86
              +    ++    KK  E K++   K
Sbjct: 1515 AKKAEEAKKADEAKKAEEAKKADEAK 1540

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 48.6 bits (115), Expect = 4e-06
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEE---KKKEKKKKEEEEGEEEEE 57
            +KK E+ K+  + KKK ++ K+K    KKK +E KK  E    + E    E E  EE+ E
Sbjct: 1308 KKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAE 1367

Query: 58   GEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSE 92
              E+ +   +++    KK+ E+K+ +     K  E
Sbjct: 1368 AAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEE 1402

Length = 2084

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 19/62 (30%), Positives = 35/62 (56%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+ KE++KE    + KE K   +K+ E+ +++ +++ EE   E +K+ EE+ E   E E 
Sbjct: 63  EEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEESSDENEKETEEKTESNVEKEI 122

Query: 61  EG 62
             
Sbjct: 123 TN 124

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|219655 pfam07946, DUF1682, Protein of unknown function (DUF1682)

 Score = 48.0 bits (115), Expect = 4e-06
 Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 11/78 (14%)

Query: 10  KKKEKKKEKKKKEKKKKEKKKKKEKKKKEE--KKKEKKKKEEEEGEEEEEGEEEGRRRRR 67
             +  +K  K +E+++++  K  E++++EE  +KKE+KKKEE E +  +   EE      
Sbjct: 254 SPEVLRKVDKTREEEEEKILKAAEEERQEEAQEKKEEKKKEEREAKLAKLSPEE------ 307

Query: 68  RRRRRRKKEREKKRSSRR 85
              +R+ +E+E+K+ +R+
Sbjct: 308 ---QRKLEEKERKKQARK 322

The members of this family are all hypothetical eukaryotic proteins of unknown function. One member is described as being an adipocyte-specific protein, but no evidence of this was found. Length = 322

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 48.6 bits (115), Expect = 5e-06
 Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKK-EKKKKEEEEGEEEEE 57
              KK+  + KKK ++K+K  + KKK E+ KK +  KKK EE KK E+ KK+ EE ++ +E
Sbjct: 1415 AAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE 1474

Query: 58   GEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
             +++    ++    ++K E  KK++   K
Sbjct: 1475 AKKKAEEAKKADEAKKKAEEAKKKADEAK 1503

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 48.6 bits (115), Expect = 5e-06
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEE--KKKEKKKKEEEEGEEEEEG 58
            +KK E+KK+  + KKK ++ K+K  + KK    KKK +E  KK E+KKK +E  ++ EE 
Sbjct: 1384 KKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEA 1443

Query: 59   EEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            ++    +++    ++ +E +KK    +K
Sbjct: 1444 KKADEAKKKAEEAKKAEEAKKKAEEAKK 1471

Length = 2084

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGL+R    +     T +     Y APE ++G        D WS+GC+  E L   
Sbjct: 137 KLTDFGLSRNGLENKKFVGTPD-----YLAPETILGVGD-DKMSDWWSLGCVIFEFLFGY 190

Query: 184 ILFQAQSP 191
             F A++P
Sbjct: 191 PPFHAETP 198

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|237753 PRK14552, PRK14552, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; Provisional

 Score = 48.0 bits (115), Expect = 5e-06
 Identities = 20/49 (40%), Positives = 35/49 (71%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEE 49
           E+  ++ +E K++  K  KKK ++KK +K+KK+KK+K++ KK KKK  +
Sbjct: 366 EELNKRIEEIKEKYPKPPKKKREEKKPQKRKKKKKRKKKGKKRKKKGRK 414

Length = 414

>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 11/96 (11%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEK-------KKKKEKKKKEEKKKEKKKKEEEEGEE 54
           + +++   +K  K+ E+  K+ ++K+K       K+  E K K E + EKK KEE + + 
Sbjct: 93  ELEQRAAAEKAAKQAEQAAKQAEEKQKQAEEAKAKQAAEAKAKAEAEAEKKAKEEAKKQA 152

Query: 55  EEE----GEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
           EEE       E +++    +++ + E + K  ++ K
Sbjct: 153 EEEAKAKAAAEAKKKAAEAKKKAEAEAKAKAEAKAK 188

TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346

>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 19/80 (23%), Positives = 37/80 (46%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +K+ E++ + K   + +KK  E KKK + + K K + + K K ++ K + E  + +   E
Sbjct: 149 KKQAEEEAKAKAAAEAKKKAAEAKKKAEAEAKAKAEAKAKAKAEEAKAKAEAAKAKAAAE 208

Query: 61  EGRRRRRRRRRRRKKEREKK 80
              +           E E+K
Sbjct: 209 AAAKAEAEAAAAAAAEAERK 228

TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 47.3 bits (113), Expect = 6e-06
 Identities = 14/31 (45%), Positives = 24/31 (77%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            K + Y+H+  I+HRD+KP NLL++++ +LK
Sbjct: 109 LKGVAYMHANGIMHRDLKPANLLISADGVLK 139

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 47.7 bits (113), Expect = 6e-06
 Identities = 19/31 (61%), Positives = 24/31 (77%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 130 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 160

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 48.2 bits (114), Expect = 6e-06
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 5/101 (4%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKE--KKKKKEKKKKEEKKKEKKKKEEEEGEEEEEG 58
            E KK ++ EKK  +  +K+ +E KK E  KKK+ E+KKK E   E KK EEE   + EE 
Sbjct: 1679 EAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAE---ELKKAEEENKIKAEEA 1735

Query: 59   EEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPD 99
            ++E    +++    +K E EKK+ +  K  +  +    R +
Sbjct: 1736 KKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776

Length = 2084

>gnl|CDD|222636 pfam14265, DUF4355, Domain of unknown function (DUF4355)

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query: 4  KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
          KE  K   KEK K +KK+E+KK E +K  +   +E+ + E +K E+E  E E E      
Sbjct: 11 KEVDKAIAKEKAKWEKKQEEKKSEAEKLAKMSAEEKAEYELEKLEKELEELEAELARREL 70

Query: 64 R 64
          +
Sbjct: 71 K 71

This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 180 and 214 amino acids in length. Length = 125

>gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742)

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 21/75 (28%), Positives = 47/75 (62%)

Query: 9   EKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRR 68
           +KKK++  E+ +K KK+ E+K+K + KKK+ KKK+ K K++++ +++++ E++  +    
Sbjct: 61  KKKKKELAEEIEKVKKEYEEKQKWKWKKKKSKKKKDKDKDKKDDKKDDKSEKKDEKEAED 120

Query: 69  RRRRRKKEREKKRSS 83
           +     K   +  S+
Sbjct: 121 KLEDLTKSYSETLST 135

This is a family of fungal proteins of unknown function. Length = 182

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 46.3 bits (110), Expect = 7e-06
 Identities = 19/61 (31%), Positives = 37/61 (60%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           ++++ KK + ++  + E+ K+E+K+    + KE K   EK+ E+ ++E EE +EE   E 
Sbjct: 47  DEQEAKKSDDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEESSDEN 106

Query: 61  E 61
           E
Sbjct: 107 E 107

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|226894 COG4499, COG4499, Predicted membrane protein [Function unknown]

 Score = 47.5 bits (113), Expect = 7e-06
 Identities = 17/52 (32%), Positives = 35/52 (67%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEG 52
           +K  E K E    ++ E K KE+K K+++ +K++K++ ++ KEK++K+E + 
Sbjct: 383 KKLGEVKDETDASEEAEAKAKEEKLKQEENEKKQKEQADEDKEKRQKDERKK 434

Length = 434

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 47.8 bits (113), Expect = 8e-06
 Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKE--KKKKKEKKKKEEKKK---EKKKKEEE--EGE 53
            ++ K+K +E KK ++ +KK +E KK +  KKK +E KK +E KK   E KKK +E  +  
Sbjct: 1447 DEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAA 1506

Query: 54   EEEEGEEEGRRRRRRRRRRRKKEREKKRSS 83
            E ++  +E ++    ++    K+ E+ + +
Sbjct: 1507 EAKKKADEAKKAEEAKKADEAKKAEEAKKA 1536

Length = 2084

>gnl|CDD|222636 pfam14265, DUF4355, Domain of unknown function (DUF4355)

 Score = 44.6 bits (106), Expect = 8e-06
 Identities = 21/57 (36%), Positives = 32/57 (56%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
          E  K   KEK K +KK+++KK + +K  K   E+K + E +K +K+ EE E E    
Sbjct: 12 EVDKAIAKEKAKWEKKQEEKKSEAEKLAKMSAEEKAEYELEKLEKELEELEAELARR 68

This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 180 and 214 amino acids in length. Length = 125

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 47.3 bits (112), Expect = 8e-06
 Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +ICD G       D   + T  V T++YR+PE+++G   +  + D+WS+GCI  EL   +
Sbjct: 288 RICDLGGC----CDERHSRTAIVSTRHYRSPEVVLGL-GWMYSTDMWSMGCIIYELYTGK 342

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR----QTRKSQSLSSLYSLSS 239
           +L+     ++ L L+   LG   P E    C   +  +L     Q R       L  ++ 
Sbjct: 343 LLYDTHDNLEHLHLMEKTLGR-LPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIAR 401

Query: 240 QATGEAV-------HLLVQMLYFDPTKRISVNSALCHPYL 272
                 V        L+  +L++D  KR++      HPY+
Sbjct: 402 ARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441

Length = 467

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 46.9 bits (112), Expect = 9e-06
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + YLH   ILHRDIK  N+L+++  ILK
Sbjct: 128 INYLHENHILHRDIKAANILIDNQGILK 155

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 47.8 bits (113), Expect = 9e-06
 Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 4/88 (4%)

Query: 3    KKEKKKEKKKEKKKEKKKKEKKKKEKKKKK----EKKKKEEKKKEKKKKEEEEGEEEEEG 58
            +K+K++ KKK    +KK +EKKK ++ KKK    +KK  E KK    KK+ +E +++ E 
Sbjct: 1370 EKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEE 1429

Query: 59   EEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            +++    +++    +K +  KK++   K
Sbjct: 1430 KKKADEAKKKAEEAKKADEAKKKAEEAK 1457

Length = 2084

>gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated

 Score = 47.5 bits (114), Expect = 9e-06
 Identities = 14/81 (17%), Positives = 34/81 (41%)

Query: 7   KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRR 66
           ++E +KE+ K + ++E K + ++    + ++E K +       EE  E     E   R  
Sbjct: 40  EEEARKEEAKREAEEEAKAEAEEAAAAEAEEEAKAEAAAAAPAEEAAEAAAAAEAAARPA 99

Query: 67  RRRRRRRKKEREKKRSSRRKP 87
                R  +   ++  +++  
Sbjct: 100 EDEAARPAEAAARRPKAKKAA 120

Length = 746

>gnl|CDD|218737 pfam05764, YL1, YL1 nuclear protein

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E ++E++ +KKK  K +  K+  KKK+KK     K  +      KKK E         + 
Sbjct: 77  ELQREERLKKKKRVKTKAYKEPTKKKKKKDPTAAKSPKAAAPRPKKKSERISWAPTLLDS 136

Query: 61  EGRRRRRRRRRRRK-------KEREKKR 81
             R+  R    + K       KERE +R
Sbjct: 137 PRRKSSRSSTVQNKEATHERLKEREIRR 164

The proteins in this family are designated YL1. These proteins have been shown to be DNA-binding and may be a transcription factor. Length = 238

>gnl|CDD|218737 pfam05764, YL1, YL1 nuclear protein

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 1   EKKKEKKKEKKKEKKKEKKK---KEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
           E +KE ++E++ +KKK  K    KE  KK+KKK     K  +    + KK+ E       
Sbjct: 73  EGEKELQREERLKKKKRVKTKAYKEPTKKKKKKDPTAAKSPKAAAPRPKKKSERISWAPT 132

Query: 58  GEEEGRRRRRRRRRRRKKE----REKKRSSRRK 86
             +  RR+  R    + KE    R K+R  RRK
Sbjct: 133 LLDSPRRKSSRSSTVQNKEATHERLKEREIRRK 165

The proteins in this family are designated YL1. These proteins have been shown to be DNA-binding and may be a transcription factor. Length = 238

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 47.7 bits (113), Expect = 9e-06
 Identities = 29/85 (34%), Positives = 50/85 (58%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E  K ++++   E+K ++ +KE KK EK+ KKEK++ EE +KE K+ E +   EEEE E+
Sbjct: 302 ELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIKREAEEEEEEQ 361

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRR 85
             + + +  +   +   +KK  S R
Sbjct: 362 LEKLQEKLEQLEEELLAKKKLESER 386

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + L+YLHS  ILHRD+KP NLL+ S+ +LK
Sbjct: 112 LRGLEYLHSNWILHRDLKPNNLLIASDGVLK 142

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 308 RQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAF--- 364
           + Y V     +    D     +L SV  V+E M   +A  L    +       +  F   
Sbjct: 66  KVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLS---EEHARLFMYQ 122

Query: 365 --KSLKYLHSARILHRDIKPGNLLVNS 389
             + LKY+HSA +LHRD+KP N+ +N+
Sbjct: 123 LLRGLKYIHSANVLHRDLKPANVFINT 149

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           +++ Y HS  I+HRDIKP N+LV+ + +LK
Sbjct: 111 QAIAYCHSHNIIHRDIKPENILVSESGVLK 140

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 14/27 (51%), Positives = 22/27 (81%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNC 391
           + L+YLHS  I+HRD+KP N+L++S+ 
Sbjct: 103 EGLEYLHSNGIIHRDLKPENILLDSDN 129

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 47.4 bits (112), Expect = 1e-05
 Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 3/88 (3%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK---EKKKKEEEEGEEEEE 57
            E KK  + +KK E+ K+ ++ +KK +E KK  E KKK E+ K   E KKK EE  ++ +E
Sbjct: 1442 EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADE 1501

Query: 58   GEEEGRRRRRRRRRRRKKEREKKRSSRR 85
             ++    +++    ++ +E +K   +++
Sbjct: 1502 AKKAAEAKKKADEAKKAEEAKKADEAKK 1529

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 47.1 bits (111), Expect = 1e-05
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKE----KKKKEEEEGEEEE 56
            EKKK  + +K +EKKK  + K+K ++ KK  + KKK EE KK+    KKK EE +   E 
Sbjct: 1288 EKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEA 1347

Query: 57   EGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
               E             K E  +K+    K
Sbjct: 1348 AKAEAEAAADEAEAAEEKAEAAEKKKEEAK 1377

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 47.1 bits (111), Expect = 1e-05
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEE---KKKEKKKKEEEEGEEEEE 57
            E KK    +KK ++ K+K +++KK  E KKK E+ KK +   KK E+ KK EE  ++ EE
Sbjct: 1409 ELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEE 1468

Query: 58   GEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
             ++    +++    ++  E +KK    +K
Sbjct: 1469 AKKADEAKKKAEEAKKADEAKKKAEEAKK 1497

Length = 2084

>gnl|CDD|236877 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 25/42 (59%)

Query: 6   KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           K K   ++K  +  KK   K+ +KK+KEK+K + KK+ +  K
Sbjct: 379 KTKAPSEKKTGKPSKKVLAKRAEKKEKEKEKPKVKKRHRDTK 420

Length = 434

>gnl|CDD|219655 pfam07946, DUF1682, Protein of unknown function (DUF1682)

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 16/52 (30%), Positives = 37/52 (71%), Gaps = 5/52 (9%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKK-----KEKKKKEEKKKEKKKK 47
           EK  +  +E+++E+ +EKK+++KK++ + K      +E++K EEK+++K+ +
Sbjct: 270 EKILKAAEEERQEEAQEKKEEKKKEEREAKLAKLSPEEQRKLEEKERKKQAR 321

The members of this family are all hypothetical eukaryotic proteins of unknown function. One member is described as being an adipocyte-specific protein, but no evidence of this was found. Length = 322

>gnl|CDD|222636 pfam14265, DUF4355, Domain of unknown function (DUF4355)

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 23/80 (28%), Positives = 42/80 (52%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
          E++K    ++  +   ++K K +KK+E+KK + +K  +   +EK + E E+ E+E E  E
Sbjct: 3  EEEKTFTDKEVDKAIAKEKAKWEKKQEEKKSEAEKLAKMSAEEKAEYELEKLEKELEELE 62

Query: 61 EGRRRRRRRRRRRKKEREKK 80
              RR  +   +K   EK 
Sbjct: 63 AELARRELKAEAKKMLSEKG 82

This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 180 and 214 amino acids in length. Length = 125

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 15/30 (50%), Positives = 22/30 (73%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + L YLHS  I+HRDIKP N+ ++ N ++K
Sbjct: 110 EGLAYLHSHGIVHRDIKPANIFLDHNGVIK 139

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase

 Score = 46.8 bits (111), Expect = 1e-05
 Identities = 19/57 (33%), Positives = 33/57 (57%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
          +KKKE+K ++K+ KK +  +KE K K + ++        KK EKK ++ +  +E  E
Sbjct: 21 KKKKEEKAKEKELKKLKAAQKEAKAKLQAQQASDGTNVPKKSEKKSRKRDVEDENPE 77

Length = 1066

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 15/31 (48%), Positives = 23/31 (74%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + + +LHS RI+HRD+KP N+LV S+  +K
Sbjct: 117 LRGVDFLHSHRIVHRDLKPQNILVTSDGQVK 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 15/30 (50%), Positives = 21/30 (70%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + + Y HS R+LHRD+KP NLL++    LK
Sbjct: 110 QGIAYCHSHRVLHRDLKPQNLLIDREGALK 139

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 17/31 (54%), Positives = 24/31 (77%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP N+ VN +C L+
Sbjct: 128 LRGLKYIHSAGIIHRDLKPSNVAVNEDCELR 158

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 20/80 (25%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 8   KEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRR 67
           K  +K   K    K K  KE K +  K++++EK++ K++K++++ E+ +E  ++ + +  
Sbjct: 78  KRVEKGGSKGPAAKTKPAKEPKNESGKEEEKEKEQVKEEKKKKK-EKPKEEPKDRKPKEE 136

Query: 68  RRRRRRKKEREKKRSSRRKP 87
            + +R  KE+EK++  + + 
Sbjct: 137 AKEKRPPKEKEKEKEKKVEE 156

This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.7 bits (110), Expect = 2e-05
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE---GEEEEE 57
            +K +E KK  + +KK E+ KK  + K+K ++ +KK  E KK  + KK+ +E    EE ++
Sbjct: 1464 KKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKK 1523

Query: 58   GEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
             +E  +    ++    KK  EKK++   K
Sbjct: 1524 ADEAKKAEEAKKADEAKKAEEKKKADELK 1552

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.7 bits (110), Expect = 2e-05
 Identities = 30/86 (34%), Positives = 50/86 (58%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E+KK K +E KK ++ + K +E KK E++KKK ++ K+++ +EKKK EE +  EEE   +
Sbjct: 1603 EEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK 1662

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRK 86
                 ++    ++K E  KK     K
Sbjct: 1663 AAEEAKKAEEDKKKAEEAKKAEEDEK 1688

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.7 bits (110), Expect = 2e-05
 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKK--EKKKKEEEEGEEEE 56
            EKKK  + +KK E+ K+  + +KK +E KKK +  KKK EE KK  E  K E E   +E 
Sbjct: 1300 EKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEA 1359

Query: 57   EGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            E  EE     +     +KKE  KK++   K
Sbjct: 1360 EAAEE-----KAEAAEKKKEEAKKKADAAK 1384

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.7 bits (110), Expect = 2e-05
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKK--EKKKKEEEEGEEEE 56
            E KK  + +KK E+ K+  + +KK +E KKK +  KK  E KKK  E KK EE +  +E 
Sbjct: 1468 EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEA 1527

Query: 57   EGEEEGRRRRRRRRRRRKKEREKKRSS 83
            +  EE ++    ++   KK+ ++ + +
Sbjct: 1528 KKAEEAKKADEAKKAEEKKKADELKKA 1554

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 46.3 bits (109), Expect = 2e-05
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK--EKKKKEEEEGEEEEEG 58
            +K +EKKK  + +KK E+ KK  + K+K ++ +KK    KKK  E KK  E    E E  
Sbjct: 1296 KKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAA 1355

Query: 59   EEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEI 93
             +E      +     KK+ E K+ +     K  E 
Sbjct: 1356 ADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEK 1390

Length = 2084

>gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 20/64 (31%), Positives = 45/64 (70%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
            E +  +K+   K +K+ E +++EKK+KK+KK+ +++KKEKK K+E+  E +   +++ +
Sbjct: 130 SESETSEKETTAKVEKEAEVEEEEKKEKKKKKEVKKEKKEKKDKKEKMVEPKGSKKKKKK 189

Query: 64  RRRR 67
           ++++
Sbjct: 190 KKKK 193

5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193

>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168)

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 25/60 (41%), Positives = 44/60 (73%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           KKE + E+ ++K++EKK+K+++K  KK+ K +KKK++KKK+KK K+  + EE+E  +   
Sbjct: 60  KKETEDEEFQQKREEKKRKDEEKTAKKRAKRQKKKQKKKKKKKAKKGNKKEEKEGSKSSE 119

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 142

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           ++    ++E KK   +E  + E+ K+E+K+    + KE+K   +K+ EE E E EEE EE
Sbjct: 42  DQAAADEQEAKKSDDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEE 101

Query: 61  E 61
            
Sbjct: 102 S 102

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
             E+KK +KK++K EKK +   K+E +K   KKK E   K+ K  + E  + + +
Sbjct: 408 PAERKKLRKKQRKAEKKAE---KEEAEKAAAKKKAEAAAKKAKGPDGETKKVDPD 459

This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homologue of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle. Length = 516

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 46.9 bits (111), Expect = 2e-05
 Identities = 23/97 (23%), Positives = 47/97 (48%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
                ++  + ++++ E  K+E +K+E+   +  K+ +E++KEKK +EEE     +E EE
Sbjct: 239 RIDLLQELLRDEQEEIESSKQELEKEEEILAQVLKENKEEEKEKKLQEEELKLLAKEEEE 298

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATR 97
                 +  RR+   E + K S +       E+   +
Sbjct: 299 LKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEK 335

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|240402 PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Provisional

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 19/45 (42%), Positives = 34/45 (75%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           K + K+E ++EK++++  KE+K+  K KK+E+KKK+E +K +K K
Sbjct: 546 KLDDKEELQREKEEKEALKEQKRLRKLKKQEEKKKKELEKLEKAK 590

Length = 651

>gnl|CDD|214661 smart00435, TOPEUc, DNA Topoisomerase I (eukaryota)

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           EK +EK K  K + K+ KK     +     K++ K K E+  EK   E +E ++E++ EE
Sbjct: 280 EKLQEKIKALKYQLKRLKKMILLFEMISDLKRKLKSKFERDNEKLDAEVKEKKKEKKKEE 339

Query: 61  EGRRRRRRRRRRRKK-EREKK 80
           + +++  R   R +K E +  
Sbjct: 340 KKKKQIERLEERIEKLEVQAT 360

DNA Topoisomerase I (eukaryota), DNA topoisomerase V, Vaccina virus topoisomerase, Variola virus topoisomerase, Shope fibroma virus topoisomeras. Length = 391

>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168)

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K+K+++K  KK  K++KKK  +KKK+KKK K+  KKEEK+  K  +E  + EEE E +++
Sbjct: 76  KRKDEEKTAKKRAKRQKKK--QKKKKKKKAKKGNKKEEKEGSKSSEESSDEEEEGEEDKQ 133

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 142

>gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional

 Score = 45.5 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEE 50
          E++ +      K+ KKE K  E KKK +KKKK+KK+K+E K E + K   
Sbjct: 44 EEENKVATTSTKKDKKEDKNNESKKKSEKKKKKKKEKKEPKSEGETKLGF 93

Length = 413

>gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional

 Score = 45.5 bits (108), Expect = 3e-05
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKKEKKKKEE 49
                KK+KK++K  E KKK +KKK+KKK+K+  K + E K   K  K+ 
Sbjct: 49 VATTSTKKDKKEDKNNESKKKSEKKKKKKKEKKEPKSEGETKLGFKTPKKS 99

Length = 413

>gnl|CDD|237753 PRK14552, PRK14552, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; Provisional

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 20/49 (40%), Positives = 36/49 (73%)

Query: 6   KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEE 54
           ++  K+ E+ KEK  K  KKK ++KK +K+KK++K+K+K KK +++G +
Sbjct: 366 EELNKRIEEIKEKYPKPPKKKREEKKPQKRKKKKKRKKKGKKRKKKGRK 414

Length = 414

>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 18/80 (22%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E++++KK E++ E+ ++++  E+ ++++ +++   +K  K+ E+  K+ EE +++   EE
Sbjct: 66  EQERQKKLEQQAEEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQAEEKQKQA--EE 123

Query: 61  EGRRRRRRRRRRRKKEREKK 80
              ++    + + + E EKK
Sbjct: 124 AKAKQAAEAKAKAEAEAEKK 143

TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346

>gnl|CDD|219868 pfam08496, Peptidase_S49_N, Peptidase family S49 N-terminal

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKK 32
          E K  +K EKK EK K K +K+K KKE+ K +
Sbjct: 67 ELKAWEKAEKKAEKAKAKAEKKKAKKEEPKPR 98

This domain is found to the N-terminus of bacterial signal peptidases of the S49 family (pfam01343). Length = 154

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRI 184
           I DFGLA+  +  P   +T  V T  Y  PEI+     Y    DVW+ GCI  ++   + 
Sbjct: 155 ITDFGLAK--QKQPESKLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQP 211

Query: 185 LFQAQSPVQQLGLITDLLGTPTPEEM 210
            F + + +     I + +  P PE M
Sbjct: 212 PFYSTNMLSLATKIVEAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|218177 pfam04615, Utp14, Utp14 protein

 Score = 45.8 bits (109), Expect = 3e-05
 Identities = 24/83 (28%), Positives = 46/83 (55%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +K K++ K + KEKK+  +++E + +E+ K ++   K  K+ EK +KEEEE E +EE   
Sbjct: 437 KKLKKENKNEFKEKKESDEEEELEDEEEAKVEKVANKLLKRSEKAQKEEEEEELDEENPW 496

Query: 61  EGRRRRRRRRRRRKKEREKKRSS 83
                   +  +++  ++K  S 
Sbjct: 497 LKTTSSVGKSAKKQDSKKKSSSK 519

This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome. Length = 728

>gnl|CDD|218797 pfam05890, Ebp2, Eukaryotic rRNA processing protein EBP2

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 15/102 (14%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKK--------KEKKKKKEKKKKEEK-KKEKKKKEEEEG 52
           KK   +   KK  ++ +K++E KK        K +++ KEKK   EK KK KKK++    
Sbjct: 122 KKLLAEAAAKKASEEARKQRELKKFGKQVQVEKLQERAKEKKDMLEKIKKLKKKRKGGGD 181

Query: 53  EE------EEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPF 88
           E        ++  + G +++ R+    + +   KR ++   F
Sbjct: 182 EGDLFDFLVDDAAKGGSKKKGRKGGAARGKPNAKRKAKDAKF 223

This family consists of several Eukaryotic rRNA processing protein EBP2 sequences. Ebp2p is required for the maturation of 25S rRNA and 60S subunit assembly. Ebp2p may be one of the target proteins of Rrs1p for executing the signal to regulate ribosome biogenesis. This family also plays a role in chromosome segregation. Length = 270

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 14/61 (22%), Positives = 35/61 (57%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           + +E K+E+K+    E K+ +   +++ ++ E++ +EE ++   + E+E  E+ E   E+
Sbjct: 61  EIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEESSDENEKETEEKTESNVEK 120

Query: 62  G 62
            
Sbjct: 121 E 121

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 16/62 (25%), Positives = 34/62 (54%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E K+E+K+    E K++K   EK+ +E +++ E++ +E   + +K+ EE+     E+   
Sbjct: 64  EVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEESSDENEKETEEKTESNVEKEIT 123

Query: 61  EG 62
             
Sbjct: 124 NP 125

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 15/80 (18%), Positives = 45/80 (56%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K +++ +E +K++  E+ ++++ ++    +K  K+ E+  K+ ++K+++  E + +   E
Sbjct: 72  KLEQQAEEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQAEEKQKQAEEAKAKQAAE 131

Query: 62  GRRRRRRRRRRRKKEREKKR 81
            + +      ++ KE  KK+
Sbjct: 132 AKAKAEAEAEKKAKEEAKKQ 151

TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346

>gnl|CDD|240402 PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Provisional

 Score = 45.4 bits (108), Expect = 4e-05
 Identities = 19/43 (44%), Positives = 34/43 (79%)

Query: 7   KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEE 49
           K + K+E ++EK++KE  K++K+ +K KK++E+KKKE +K E+
Sbjct: 546 KLDDKEELQREKEEKEALKEQKRLRKLKKQEEKKKKELEKLEK 588

Length = 651

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  A    KI D G+++V +   N A TQ + T +Y APE+  G R YS   D+WS+GC
Sbjct: 134 ILLVANDLVKIGDLGISKVLKK--NMAKTQ-IGTPHYMAPEVWKG-RPYSYKSDIWSLGC 189

Query: 175 IFAELLGRRILFQAQS 190
           +  E+      F+A+S
Sbjct: 190 LLYEMATFAPPFEARS 205

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 17/30 (56%), Positives = 21/30 (70%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           K L + HS  +LHRD+KP NLL+N N  LK
Sbjct: 110 KGLAFCHSHNVLHRDLKPQNLLINKNGELK 139

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 20/47 (42%), Positives = 32/47 (68%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           +KK++K  E KK+ +K+KKKK++KK+ K + + K   +  KK KK K
Sbjct: 57  DKKEDKNNESKKKSEKKKKKKKEKKEPKSEGETKLGFKTPKKSKKTK 103

Length = 413

>gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 21/57 (36%), Positives = 35/57 (61%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
           +K  E KK+ +K+KKK+K+KKE K + + K   K  K+ KK +KK  + +  E+ + 
Sbjct: 61  DKNNESKKKSEKKKKKKKEKKEPKSEGETKLGFKTPKKSKKTKKKPPKPKPNEDVDN 117

Length = 413

>gnl|CDD|219655 pfam07946, DUF1682, Protein of unknown function (DUF1682)

 Score = 44.6 bits (106), Expect = 5e-05
 Identities = 16/55 (29%), Positives = 41/55 (74%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEE 56
           +++E+K  K  E++++++ +EKK+++KK+++E K  +   +E++K EE+E +++ 
Sbjct: 266 EEEEEKILKAAEEERQEEAQEKKEEKKKEEREAKLAKLSPEEQRKLEEKERKKQA 320

The members of this family are all hypothetical eukaryotic proteins of unknown function. One member is described as being an adipocyte-specific protein, but no evidence of this was found. Length = 322

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 45.3 bits (107), Expect = 5e-05
 Identities = 31/84 (36%), Positives = 51/84 (60%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E++K   +EK KE +KE KK EK+ K++K++ E+ +KE K+ E K++ EEE EE+ E  +
Sbjct: 307 ERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIKREAEEEEEEQLEKLQ 366

Query: 61  EGRRRRRRRRRRRKKEREKKRSSR 84
           E   +       +KK   ++ SS 
Sbjct: 367 EKLEQLEEELLAKKKLESERLSSA 390

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|235322 PRK04950, PRK04950, ProP expression regulator; Provisional

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 12/51 (23%), Positives = 30/51 (58%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
            K + ++ E++ +K++   +KEK  + ++K K K  ++++K   +K E + 
Sbjct: 108 AKVQAQRAEQQAKKREAAGEKEKAPRRERKPKPKAPRKKRKPRAQKPEPQH 158

Length = 213

>gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 6   KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKK--KKEEEEGEEEEEGEEEGR 63
           + ++ K  +  E++KK   +   +   ++KK EE +  +   K E    E       E  
Sbjct: 195 RAQQAKLAQLLEERKKTLAQLNSELSADQKKLEELRANESRLKNEIASAEAAAAKAREAA 254

Query: 64  RRRRRRRRRRKKEREKKRSSRRKP 87
                   R +    K+     KP
Sbjct: 255 AAAEAAAARARAAEAKRTGETYKP 278

Length = 420

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVG 173
           ++   T + K+CDFG+A +   + +K  T  V T Y+ APE++   ++Y    D+WS+G
Sbjct: 132 ILVTNTGNVKLCDFGVAALLNQNSSKRSTF-VGTPYWMAPEVITEGKYYDTKADIWSLG 189

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|221275 pfam11861, DUF3381, Domain of unknown function (DUF3381)

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 22/76 (28%), Positives = 48/76 (63%), Gaps = 2/76 (2%)

Query: 11  KKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRR 70
           KK+ KK  K ++K +K     K++K++EE+++ + ++ +EE + +E  E+E    + +R 
Sbjct: 77  KKDFKKLLKWRKKVRKLLGLDKKEKEEEEEEEVEVEELDEEEQIDELLEKE--LAKLKRE 134

Query: 71  RRRKKEREKKRSSRRK 86
           +RR+ ER++K   + +
Sbjct: 135 KRRENERKQKEILKEQ 150

This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 156 to 174 amino acids in length. This domain is found associated with pfam07780, pfam01728. Length = 154

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D G+A++   + N A T  V T YY +PE L   + Y+   DVW++G +  E    +
Sbjct: 141 KIGDLGVAKLLSDNTNFANTI-VGTPYYLSPE-LCEDKPYNEKSDVWALGVVLYECCTGK 198

Query: 184 ILFQAQS 190
             F A +
Sbjct: 199 HPFDANN 205

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein

 Score = 44.8 bits (106), Expect = 5e-05
 Identities = 21/57 (36%), Positives = 43/57 (75%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
          E +KE   E+++E+K+EKK++E+K  +K+++ ++++++E+KK+K KK +E   E E 
Sbjct: 30 EVEKEVPDEEEEEEKEEKKEEEEKTTDKEEEVDEEEEKEEKKKKTKKVKETTTEWEL 86

Length = 529

>gnl|CDD|237744 PRK14521, rpsP, 30S ribosomal protein S16; Provisional

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 19/59 (32%), Positives = 27/59 (45%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGE 59
             KK+K  + KK  KK   + EKK  E + +   +KK  +      +E    EEEE  E
Sbjct: 115 NAKKDKLSKAKKAAKKAALEAEKKVNEARAEAVAEKKAAEAAAVAAEEAAAAEEEEAEE 173

Length = 186

>gnl|CDD|219868 pfam08496, Peptidase_S49_N, Peptidase family S49 N-terminal

 Score = 42.5 bits (101), Expect = 6e-05
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 3  KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKK 36
          KKE K  +K EKK EK K + +KK+ KK++ K +
Sbjct: 65 KKELKAWEKAEKKAEKAKAKAEKKKAKKEEPKPR 98

This domain is found to the N-terminus of bacterial signal peptidases of the S49 family (pfam01343). Length = 154

>gnl|CDD|224212 COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]

 Score = 44.7 bits (106), Expect = 6e-05
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKE------EKKKEKKKKEEEEGEE 54
           +K K   +  ++  KK KK K  K    ++  E K+        +   EK + ++   E 
Sbjct: 356 DKSKTPSENAQRYFKKYKKLKGAKVNLDRQLSELKEAIAYYESAKTALEKAEGKKAIEEI 415

Query: 55  EEEGEEEGRRRRRRRRRRRKKEREKKR 81
            EE  EEG  + ++++R++K+  EK R
Sbjct: 416 REELIEEGLLKSKKKKRKKKEWFEKFR 442

Length = 564

>gnl|CDD|223880 COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 18/61 (29%), Positives = 28/61 (45%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+ K   + +   +    K KEK K EKK KK K K + K K K K + +   ++   + 
Sbjct: 65  EQPKPPTEPETPPEPTPPKPKEKPKPEKKPKKPKPKPKPKPKPKPKVKPQPKPKKPPSKT 124

Query: 61  E 61
            
Sbjct: 125 A 125

Length = 244

>gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated

 Score = 44.5 bits (106), Expect = 7e-05
 Identities = 15/102 (14%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 1   EKKKEKKKEKKKEK----KKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEE 56
           EK KE   E K       ++E +K+E K++ +++ K + ++    + +++ + E      
Sbjct: 22  EKLKELGIEVKSHSSTVEEEEARKEEAKREAEEEAKAEAEEAAAAEAEEEAKAEAAAAAP 81

Query: 57  EGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRP 98
             E            R  ++   + +        ++ +A + 
Sbjct: 82  AEEAAEAAAAAEAAARPAEDEAARPAEAAARRPKAKKAAKKK 123

Length = 746

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 14/30 (46%), Positives = 21/30 (70%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
             L+YLH    +HRDIK  N+LV++N ++K
Sbjct: 113 LGLEYLHDRNTVHRDIKGANILVDTNGVVK 142

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|219655 pfam07946, DUF1682, Protein of unknown function (DUF1682)

 Score = 43.8 bits (104), Expect = 7e-05
 Identities = 17/45 (37%), Positives = 36/45 (80%), Gaps = 3/45 (6%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKK---KEKKKKKEKKKKEEKKK 42
           E+++E+ +EKK+EKKKE+++ +  K   +E++K +EK++K++ +K
Sbjct: 278 EERQEEAQEKKEEKKKEEREAKLAKLSPEEQRKLEEKERKKQARK 322

The members of this family are all hypothetical eukaryotic proteins of unknown function. One member is described as being an adipocyte-specific protein, but no evidence of this was found. Length = 322

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE--VVTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + APE +   R
Sbjct: 126 GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AYR 184

Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 185 KFTSASDVWSYGIVMWEVM 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 44.0 bits (104), Expect = 7e-05
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 361 SAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +  K L YLHS +I+HRDIKP N+L+     +K
Sbjct: 112 ESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVK 145

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|178945 PRK00247, PRK00247, putative inner membrane protein translocase component YidC; Validated

 Score = 44.1 bits (104), Expect = 7e-05
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 20/120 (16%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKK------------------KEKKKKKEKKKKEE--KK 41
           +++ + +EK+KEKK       + +                  + KK +  +K + +  KK
Sbjct: 289 EQRAQYREKQKEKKAFLWTLRRNRLRMIITPWRAPELHAENAEIKKTRTAEKNEAKARKK 348

Query: 42  KEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDST 101
           +  +K+   E E   E  +E      R R RR   + KK+            S       
Sbjct: 349 EIAQKRRAAEREINREARQERAAAMARARARRAAVKAKKKGLIDASPNEDTPSENEESKG 408

Length = 429

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.7 bits (105), Expect = 8e-05
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKK--EKKKKKEKKKKEEKKK-EKKKKEEEEGEEEEE 57
            +K  E KK ++ +K  E KK E+KKK  E KK +E KK EEKKK E+ KK EE+      
Sbjct: 1522 KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALR 1581

Query: 58   GEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY 117
              EE ++    R     K  E+++  + +  K +E +  + +      + ++   QL   
Sbjct: 1582 KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKK 1641

Query: 118  QA 119
            +A
Sbjct: 1642 EA 1643

Length = 2084

>gnl|CDD|237035 PRK12280, rplW, 50S ribosomal protein L23; Reviewed

 Score = 42.4 bits (100), Expect = 8e-05
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+K+  K+ ++KE  K KK+K++KK++K  +K  KKK  K  +   K+  +    ++ E 
Sbjct: 98  EQKEVSKETEEKEAIKAKKEKKEKKEKKVAEKLAKKKSTKTTKNTTKKATKKTTTKKEEG 157

Query: 61  E 61
           +
Sbjct: 158 K 158

Length = 158

>gnl|CDD|237035 PRK12280, rplW, 50S ribosomal protein L23; Reviewed

 Score = 42.4 bits (100), Expect = 8e-05
 Identities = 21/62 (33%), Positives = 39/62 (62%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           EK++++  ++ +EK+  K KKEKK+K++KK  EK  K++  K  K   ++  ++    +E
Sbjct: 96  EKEQKEVSKETEEKEAIKAKKEKKEKKEKKVAEKLAKKKSTKTTKNTTKKATKKTTTKKE 155

Query: 61  EG 62
           EG
Sbjct: 156 EG 157

Length = 158

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  +    K  T    T  Y APEI++  + Y  +VD WS+G +  ELL
Sbjct: 133 KLVDFGFAKKLK-SGQKTWTF-CGTPEYVAPEIILN-KGYDFSVDYWSLGILLYELL 186

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 17/28 (60%), Positives = 24/28 (85%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 136 IKHLHSAGIIHRDLKPSNIVVKSDCTLK 163

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.0 bits (103), Expect = 1e-04
 Identities = 26/86 (30%), Positives = 53/86 (61%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E++K+ K E+ K+ ++ K K E+ KK +++KK+ ++ ++K+ E+KKK EE  + EEE + 
Sbjct: 1602 EEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI 1661

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRK 86
            +     ++    +KK  E K++   +
Sbjct: 1662 KAAEEAKKAEEDKKKAEEAKKAEEDE 1687

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.0 bits (103), Expect = 1e-04
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 7    KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEE---KKKEKKKKEEEEGEEEEEGEEEGR 63
            K E+ ++  + KK +EKKK ++ KK E+KKK +   KK E+ KK +E  ++ EE +++  
Sbjct: 1273 KAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKAD 1332

Query: 64   RRRRRRRRRRKKEREKKRSSRRKPFKL 90
              +++    +K     K  +     + 
Sbjct: 1333 AAKKKAEEAKKAAEAAKAEAEAAADEA 1359

Length = 2084

>gnl|CDD|220383 pfam09756, DDRGK, DDRGK domain

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 23/68 (33%), Positives = 47/68 (69%), Gaps = 6/68 (8%)

Query: 2  KKKEKKKEKKKEKKKEKKKKEKKKKE---KKKKKEKKKKEEKKKEKKKKE---EEEGEEE 55
          KK E+K+E ++++++E +++ +KKKE   +K+++E+ +KE+++ EK K     EEEG ++
Sbjct: 32 KKLEEKREGERKEEEELEEEREKKKEEEERKEREEQARKEQEEYEKLKSSFVVEEEGTDK 91

Query: 56 EEGEEEGR 63
             +EE  
Sbjct: 92 LSADEESN 99

This is a family of proteins of approximately 300 residues, found in plants and vertebrates. They contain a highly conserved DDRGK motif. Length = 189

>gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated

 Score = 44.1 bits (105), Expect = 1e-04
 Identities = 17/86 (19%), Positives = 32/86 (37%)

Query: 2  KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
          +  E  KE     K+  +K ++   E K      ++EE +KE+ K+E EE  + E  E  
Sbjct: 5  RVYELAKELGVSSKELLEKLKELGIEVKSHSSTVEEEEARKEEAKREAEEEAKAEAEEAA 64

Query: 62 GRRRRRRRRRRRKKEREKKRSSRRKP 87
                  +         + ++    
Sbjct: 65 AAEAEEEAKAEAAAAAPAEEAAEAAA 90

Length = 746

>gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated

 Score = 44.1 bits (105), Expect = 1e-04
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 1/99 (1%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKK-KKEKKKKEEKKKEKKKKEEEEGEEEEEGE 59
           E  KE     K+  +K K+   + K      ++E+ +KEE K+E +++ + E EE    E
Sbjct: 8   ELAKELGVSSKELLEKLKELGIEVKSHSSTVEEEEARKEEAKREAEEEAKAEAEEAAAAE 67

Query: 60  EEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRP 98
            E   +         +E  +  ++     + +E  A RP
Sbjct: 68  AEEEAKAEAAAAAPAEEAAEAAAAAEAAARPAEDEAARP 106

Length = 746

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           KI DFG+++V E           V T  Y +PE + G   YS A D+WS+G    E    
Sbjct: 140 KIADFGISKVLEN--TLDQCNTFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALG 196

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHAC 214
           +  F          L+  +   P P       
Sbjct: 197 KFPFLPPGQPSFFELMQAICDGPPPSLPAEEF 228

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|237753 PRK14552, PRK14552, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; Provisional

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 18/53 (33%), Positives = 40/53 (75%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGE 53
           ++ KE+  ++ +E K++  K  KKK+E+KK +++KKK+++KK+ KK++++  +
Sbjct: 362 DELKEELNKRIEEIKEKYPKPPKKKREEKKPQKRKKKKKRKKKGKKRKKKGRK 414

Length = 414

>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 14/93 (15%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEK-----------KKKKEKKKKEEKKKEKKKKEEE 50
            K+ ++K+K+ E+ K K+  E K K +           KK+ E++ K +   E KKK  E
Sbjct: 111 AKQAEEKQKQAEEAKAKQAAEAKAKAEAEAEKKAKEEAKKQAEEEAKAKAAAEAKKKAAE 170

Query: 51  ---EGEEEEEGEEEGRRRRRRRRRRRKKEREKK 80
              + E E + + E + + +    + K E  K 
Sbjct: 171 AKKKAEAEAKAKAEAKAKAKAEEAKAKAEAAKA 203

TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346

>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE---KKKKEEKKK---EKKKKEEEEGEE 54
           ++ +E +K++  E+ ++K+ +++   EK  K+     K+ EEK+K   E K K+  E + 
Sbjct: 75  QQAEEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQAEEKQKQAEEAKAKQAAEAKA 134

Query: 55  EEEGEEEGRRRRRRRRRRRKKEREKK 80
           + E E E   ++ +   +++ E E K
Sbjct: 135 KAEAEAE---KKAKEEAKKQAEEEAK 157

TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 3/92 (3%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           EK KE +KE KK +K+ KK+KE+ ++ +K+ KE + K E ++E++++ E+  E+ E+ EE
Sbjct: 315 EKLKESEKELKKLEKELKKEKEEIEELEKELKELEIKREAEEEEEEQLEKLQEKLEQLEE 374

Query: 61  E---GRRRRRRRRRRRKKEREKKRSSRRKPFK 89
           E    ++    R     K +E++   + +  K
Sbjct: 375 ELLAKKKLESERLSSAAKLKEEELELKNEEEK 406

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 23/93 (24%), Positives = 51/93 (54%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           + +  K + +K + +++ K+ EK+ K+ +K+ +K+K+E ++ EK+ KE E   E EE EE
Sbjct: 300 KSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIKREAEEEEE 359

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEI 93
           E   + + +  + ++E   K+    +    +  
Sbjct: 360 EQLEKLQEKLEQLEEELLAKKKLESERLSSAAK 392

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|219868 pfam08496, Peptidase_S49_N, Peptidase family S49 N-terminal

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 15 KKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
          KKE K  EK +K+ +K K K +K++ KKE+ K 
Sbjct: 65 KKELKAWEKAEKKAEKAKAKAEKKKAKKEEPKP 97

This domain is found to the N-terminus of bacterial signal peptidases of the S49 family (pfam01343). Length = 154

>gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 1   EKKKEKKKE---KKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
           E+ +        + ++ K  +  +E+KK   +   E    ++K +E +  E     E   
Sbjct: 183 EQAELTTLLSEQRAQQAKLAQLLEERKKTLAQLNSELSADQKKLEELRANESRLKNEIAS 242

Query: 58  GEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            E    + R             + +  ++
Sbjct: 243 AEAAAAKAREAAAAAEAAAARARAAEAKR 271

Length = 420

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 32/84 (38%), Positives = 38/84 (45%), Gaps = 11/84 (13%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
           K+CDFG++       N      V T  Y APE + G   Y    DVWS+G  F EL LGR
Sbjct: 135 KLCDFGVST---QLVNSIAKTYVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGR 190

Query: 183 RILFQAQS------PVQQLGLITD 200
               Q Q       P+Q L  I D
Sbjct: 191 FPYPQIQKNQGSLMPLQLLQCIVD 214

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 23/66 (34%)

Query: 124 KICDFGLAR---------VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           K+ DFGL++         V  PD             Y APE+L G + Y   VD WS+GC
Sbjct: 141 KLTDFGLSKGIVTYANSVVGSPD-------------YMAPEVLRG-KGYDFTVDYWSLGC 186

Query: 175 IFAELL 180
           +  E L
Sbjct: 187 MLYEFL 192

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|221175 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polymerase III subunit Rpc31

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 1   EKKKEKKKEKKKEKKKEKKKK--EKKKKEKKKKKEKKKK----EEKKKEKKKKEEEEGEE 54
            KK  KK    K K+K       E+   EK    EKK K    E+  +E +K EEEE EE
Sbjct: 123 NKKAGKKLALSKFKRKVGLFTEEEEDIDEKLSMLEKKLKELEAEDVDEEDEKDEEEEEEE 182

Query: 55  EEEGEEEG 62
           EEE E+  
Sbjct: 183 EEEDEDFD 190

RNA polymerase III contains seventeen subunits in yeasts and in human cells. Twelve of these are akin to RNA polymerase I or II and the other five are RNA pol III-specific, and form the functionally distinct groups (i) Rpc31-Rpc34-Rpc82, and (ii) Rpc37-Rpc53. Rpc31, Rpc34 and Rpc82 form a cluster of enzyme-specific subunits that contribute to transcription initiation in S.cerevisiae and H.sapiens. There is evidence that these subunits are anchored at or near the N-terminal Zn-fold of Rpc1, itself prolonged by a highly conserved but RNA polymerase III-specific domain. Length = 221

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D GLA VE  D  K +TQ   T  Y APEIL     YS  VD +++GC   E++  R
Sbjct: 135 RLSDLGLA-VELKD-GKTITQRAGTNGYMAPEILK-EEPYSYPVDWFAMGCSIYEMVAGR 191

Query: 184 ILFQ 187
             F+
Sbjct: 192 TPFK 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|215641 PLN03237, PLN03237, DNA topoisomerase 2; Provisional

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 18/56 (32%), Positives = 27/56 (48%)

Query: 3    KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEG 58
            K++ K E+ +EK +    + +    KK  ++  KK   KK  KK  E E  EE  G
Sbjct: 1170 KEDAKAEEAREKLQRAAARGESGAAKKVSRQAPKKPAPKKTTKKASESETTEETYG 1225

Length = 1465

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 23/29 (79%)

Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
           +L+++HS RI+HRDIKP N+ + +  ++K
Sbjct: 118 ALEHMHSKRIMHRDIKPANVFITATGVVK 146

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 362 AAFKSLKYLHSAR-ILHRDIKPGNLLVNS 389
           A  K L YLH    I+HRD+KP N+LVNS
Sbjct: 108 AVLKGLTYLHEKHKIIHRDVKPSNILVNS 136

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 18/106 (16%)

Query: 120 TYSS--KICDFG----LARVEEPDPNKAMTQEVVTQYYRAPEIL-MGARHYSAAVDVWSV 172
           TYS   KI DFG    LA +     N        T  Y APE++  G R Y A  D+WS+
Sbjct: 143 TYSGVVKISDFGTSKRLAGI-----NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSL 197

Query: 173 GCIFAELLGRRILF----QAQSPVQQLGLITDLLGTPTPEEMRHAC 214
           GC   E+   +  F    + Q+ + ++G+         PE +    
Sbjct: 198 GCTIVEMATGKPPFIELGEPQAAMFKVGMFKI--HPEIPESLSAEA 241

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|233503 TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, large subunit, splicing factor

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 18/104 (17%), Positives = 42/104 (40%), Gaps = 1/104 (0%)

Query: 10  KKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRR 69
           + +E  +E++K   + +++  ++ +++  ++ + + +          E      RRR   
Sbjct: 1   RDEEPDREREKSRGRDRDRSSERPRRRSRDRSRFRDRHRRSRERSYREDSRPRDRRRYDS 60

Query: 70  RRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQ 113
           R  R       R SR +P + S  S    +      + R P+ Q
Sbjct: 61  RSPRSLRYSSVRRSRDRPRRRSR-SVRSIEQHRRRLRDRSPSNQ 103

These splicing factors consist of an N-terminal arginine-rich low complexity domain followed by three tandem RNA recognition motifs (pfam00076). The well-characterized members of this family are auxilliary components of the U2 small nuclear ribonuclearprotein splicing factor (U2AF). These proteins are closely related to the CC1-like subfamily of splicing factors (TIGR01622). Members of this subfamily are found in plants, metazoa and fungi. Length = 509

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 42.4 bits (99), Expect = 2e-04
 Identities = 17/28 (60%), Positives = 24/28 (85%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLK 159

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 17/28 (60%), Positives = 24/28 (85%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168)

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 24/64 (37%), Positives = 43/64 (67%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +++K  KK  K++KKK+KKKK+KK K+  KK+EK+  +  ++   ++EE E +++EE  E
Sbjct: 79  DEEKTAKKRAKRQKKKQKKKKKKKAKKGNKKEEKEGSKSSEESSDEEEEGEEDKQEEPVE 138

Query: 61  EGRR 64
              +
Sbjct: 139 IMEK 142

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 142

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKK--KKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEG 58
           +   ++++ KK + ++  + +E K  +KE    ++K+ K + +KE ++ EEE  EE+EE 
Sbjct: 43  QAAADEQEAKKSDDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEEDEES 102

Query: 59  EEEG 62
            +E 
Sbjct: 103 SDEN 106

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 33/61 (54%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E++ E       E+KK +KK+ K +K+ +K++ +K   +KK E   K+ +  + E +  +
Sbjct: 398 EEEGENGNLSPAERKKLRKKQRKAEKKAEKEEAEKAAAKKKAEAAAKKAKGPDGETKKVD 457

Query: 61  E 61
            
Sbjct: 458 P 458

This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homologue of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle. Length = 516

>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional

 Score = 42.8 bits (102), Expect = 2e-04
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE- 60
           KK  + K K+ E++ ++  +E KK E +  K++   E K++  K + E E E  E   E 
Sbjct: 26  KKIAEAKIKEAEEEAKRILEEAKK-EAEAIKKEALLEAKEEIHKLRNEFEKELRERRNEL 84

Query: 61  ---EGRRRRRRRRRRRKKEREKKRSSR 84
              E R  ++     RK E  +KR   
Sbjct: 85  QKLEKRLLQKEENLDRKLELLEKREEE 111

Length = 520

>gnl|CDD|226894 COG4499, COG4499, Predicted membrane protein [Function unknown]

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 14/54 (25%), Positives = 33/54 (61%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEE 54
           +   +K  E K E    ++ + K K+EK K++E +KK++++ ++ K++ ++ E 
Sbjct: 379 QDYTKKLGEVKDETDASEEAEAKAKEEKLKQEENEKKQKEQADEDKEKRQKDER 432

Length = 434

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)

Query: 1   EKKKEKKKEKKKEKKKEKKKK-------EKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGE 53
           EK+K+K++ KK  ++ E   +        K ++ K K++ KK  E  + ++K + EEE  
Sbjct: 168 EKRKKKERLKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEENL 227

Query: 54  EEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATR 97
              +  +    R    +   + E+E+  SS+++  K  EI A  
Sbjct: 228 LYLDYLKLNEERIDLLQELLRDEQEEIESSKQELEKEEEILAQV 271

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 21/85 (24%), Positives = 49/85 (57%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +   E+K ++ +++ K+ +K+ KK+KE+ ++ EK+ KE + K + ++EEEE  E+ + + 
Sbjct: 310 KVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIKREAEEEEEEQLEKLQEKL 369

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRR 85
           E        +++ + ER    +  +
Sbjct: 370 EQLEEELLAKKKLESERLSSAAKLK 394

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
          E + EKK   ++E ++ KKKKE+K KEK+ KK K  ++E K + + ++  +G    +  E
Sbjct: 5  ESEAEKKILTEEELER-KKKKEEKAKEKELKKLKAAQKEAKAKLQAQQASDGTNVPKKSE 63

Query: 61 EGRRRR 66
          +  R+R
Sbjct: 64 KKSRKR 69

Length = 1066

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 13/30 (43%), Positives = 22/30 (73%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + L+ LH  +ILHRD+K  N+L+ +N ++K
Sbjct: 114 RGLQALHEQKILHRDLKSANILLVANDLVK 143

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|235322 PRK04950, PRK04950, ProP expression regulator; Provisional

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 9/52 (17%), Positives = 31/52 (59%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEE 55
           K K + ++ E++ +K++   +K++  +++ K K +  +K++K + ++   + 
Sbjct: 107 KAKVQAQRAEQQAKKREAAGEKEKAPRRERKPKPKAPRKKRKPRAQKPEPQH 158

Length = 213

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)

Query: 362 AAFKSLKYLHSARILHRDIKPGNLLVNS 389
           A  K L YL S +ILHRD+KP N+LVN+
Sbjct: 103 AVVKGLTYLWSLKILHRDVKPSNMLVNT 130

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|220102 pfam09073, BUD22, BUD22

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 20/57 (35%), Positives = 35/57 (61%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           E K +K K KKK KK K+K+ KE   K ++++ E + + K ++  E+  ++EE E+ 
Sbjct: 143 ETKAKKGKAKKKTKKSKKKEAKESSDKDDEEESESEDESKSEESAEDDSDDEEEEDS 199

BUD22 has been shown in yeast to be a nuclear protein involved in bud-site selection. It plays a role in positioning the proximal bud pole signal. More recently it has been shown to be involved in ribosome biogenesis. Length = 424

>gnl|CDD|220102 pfam09073, BUD22, BUD22

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 20/59 (33%), Positives = 36/59 (61%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           + + KK K K+K K+ KKKE K+   K  +E+ + E++ K ++  E++  +EEEE  + 
Sbjct: 143 ETKAKKGKAKKKTKKSKKKEAKESSDKDDEEESESEDESKSEESAEDDSDDEEEEDSDS 201

BUD22 has been shown in yeast to be a nuclear protein involved in bud-site selection. It plays a role in positioning the proximal bud pole signal. More recently it has been shown to be involved in ribosome biogenesis. Length = 424

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFGL+R    D    +    +   + APE L     +++  DVWS G +  E+ 
Sbjct: 143 KISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLK-EGKFTSKSDVWSFGVLLWEIF 198

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I D GLA VE     K +     T  Y APE+L G   Y  +VD +++GC   E++  R
Sbjct: 135 RISDLGLA-VELKG-GKKIKGRAGTPGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGR 191

Query: 184 ILFQA 188
             F+ 
Sbjct: 192 SPFRQ 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG+A  +  D +K     V T Y+ APE++  +   S A D+WS+GC   ELL
Sbjct: 139 KLADFGVA-TKLNDVSKDDASVVGTPYWMAPEVIEMSGA-STASDIWSLGCTVIELL 193

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 33/150 (22%)

Query: 123 SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           +K+ DFG+AR        A T  V T YY +PEI    R Y+   D+WS+GC+  EL   
Sbjct: 141 AKLGDFGIARQLNDSMELAYTC-VGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTL 198

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
           +  F+  + + QL L                C G                    +S   +
Sbjct: 199 KHPFEGNN-LHQLVL--------------KICQG----------------YFAPISPNFS 227

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            +   L+ Q+    P  R S+ S L  P+L
Sbjct: 228 RDLRSLISQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|220371 pfam09736, Bud13, Pre-mRNA-splicing factor of RES complex

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 17/55 (30%), Positives = 40/55 (72%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEE 55
          +++++++KE+K+EK+KE  K   +K+E++K+ E+ +K + K   +  ++E+ +EE
Sbjct: 21 KEREKEEKERKEEKEKEWGKGLVQKEEREKRLEELEKAKNKPLARYADDEDYDEE 75

This entry is characterized by proteins with alternating conserved and low-complexity regions. Bud13 together with Snu17p and a newly identified factor, Pml1p/Ylr016c, form a novel trimeric complex. called The RES complex, pre-mRNA retention and splicing complex. Subunits of this complex are not essential for viability of yeasts but they are required for efficient splicing in vitro and in vivo. Furthermore, inactivation of this complex causes pre-mRNA leakage from the nucleus. Bud13 contains a unique, phylogenetically conserved C-terminal region of unknown function. Length = 141

>gnl|CDD|220371 pfam09736, Bud13, Pre-mRNA-splicing factor of RES complex

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 22/60 (36%), Positives = 42/60 (70%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
          EK++EK++EK+++++KE+K+KE  K   +K++ +K+ EE +K K K      ++E+  EE
Sbjct: 16 EKREEKEREKEEKERKEEKEKEWGKGLVQKEEREKRLEELEKAKNKPLARYADDEDYDEE 75

This entry is characterized by proteins with alternating conserved and low-complexity regions. Bud13 together with Snu17p and a newly identified factor, Pml1p/Ylr016c, form a novel trimeric complex. called The RES complex, pre-mRNA retention and splicing complex. Subunits of this complex are not essential for viability of yeasts but they are required for efficient splicing in vitro and in vivo. Furthermore, inactivation of this complex causes pre-mRNA leakage from the nucleus. Bud13 contains a unique, phylogenetically conserved C-terminal region of unknown function. Length = 141

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFGL+R    D         +   + APE L     +++  DVWS G +  E+ 
Sbjct: 142 KISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLK-EGKFTSKSDVWSFGVLLWEIF 197

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional

 Score = 43.5 bits (103), Expect = 2e-04
 Identities = 17/92 (18%), Positives = 36/92 (39%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
                  K+   +     K     KKK KK+ +      +KKK+ +KK   + + +   ++
Sbjct: 1284 SPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQ 1343

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSE 92
                +  R  RR +K++    S      ++ +
Sbjct: 1344 ASASQSSRLLRRPRKKKSDSSSEDDDDSEVDD 1375

Length = 1388

>gnl|CDD|217756 pfam03839, Sec62, Translocation protein Sec62

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 17/59 (28%), Positives = 31/59 (52%)

Query: 3  KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K   ++K  EK K   K +  ++ KK   ++KK+E+KK +KKK   +    +   ++E
Sbjct: 34 NKINSQDKAIEKFKLLIKAQMAERVKKLHSQEKKEEKKKPKKKKVPLQVNPAQLFVDDE 92

Length = 217

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 31/151 (20%)

Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S K+ DFG      P+ +K  T  V T Y+ APE++   + Y   VD+WS+G +  E++ 
Sbjct: 153 SVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVE 210

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
               +  ++P++ L LI    GTP                  + +  + LS+++      
Sbjct: 211 GEPPYLNENPLRALYLIAT-NGTP------------------ELQNPEKLSAIFR----- 246

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  L + L  D  KR S    L HP+L
Sbjct: 247 -----DFLNRCLEMDVEKRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 367 LKYLHSARILHRDIKPGNLLVNS 389
           + YLH   I+HRDIKP NLL+NS
Sbjct: 181 IAYLHRRHIVHRDIKPSNLLINS 203

Length = 353

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 37/163 (22%)

Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARH-YSAAVDVWSVGCIFAELLG 181
           K+ DFG  A+V +  P +     V T Y+ APE++  +R  Y   VD+WS+G +  E++ 
Sbjct: 155 KLSDFGFCAQVSKEVPRRKSL--VGTPYWMAPEVI--SRLPYGTEVDIWSLGIMVIEMVD 210

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
               +  + P+Q +  I D L    P ++++             + S  L S        
Sbjct: 211 GEPPYFNEPPLQAMKRIRDNL----PPKLKNL-----------HKVSPRLRS-------- 247

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMC 284
                  L +ML  DP +R +    L HP+L +      S + 
Sbjct: 248 ------FLDRMLVRDPAQRATAAELLNHPFLAKAGP--PSSIV 282

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 24/62 (38%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYR------------APEILMGARHYSAAVDVWS 171
           KI DFGL+R    D            YYR            APE L     +++  DVWS
Sbjct: 142 KISDFGLSRDIYEDD-----------YYRKRGGGKLPIKWMAPESLK-DGKFTSKSDVWS 189

Query: 172 VG 173
            G
Sbjct: 190 FG 191

Length = 258

>gnl|CDD|221952 pfam13166, AAA_13, AAA domain

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 1   EKKKEKKK---EKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKK--KKEEEEGEEE 55
           E+  E +    E KKE KK ++K E+ + E +KK+E+ +K + K   K  KK  ++ +  
Sbjct: 88  EENIEIEAQIEELKKELKKLEEKIEQLEAEIEKKEEELEKAKNKFLDKAWKKLAKKYDSN 147

Query: 56  EEGEEEGRRRRRRRRRRRKKEREKK 80
                +G   ++  + +  KE +  
Sbjct: 148 LSEALKGLNYKKNFKEKLLKELKSV 172

This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease. Length = 713

>gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 19/70 (27%), Positives = 46/70 (65%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
              +   + +  EK+   K +++ + E+++KKEKKKK+E KKEKK+K++++ +  E    
Sbjct: 124 PPSELGSESETSEKETTAKVEKEAEVEEEEKKEKKKKKEVKKEKKEKKDKKEKMVEPKGS 183

Query: 61  EGRRRRRRRR 70
           + ++++++++
Sbjct: 184 KKKKKKKKKK 193

5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193

>gnl|CDD|233467 TIGR01554, major_cap_HK97, phage major capsid protein, HK97 family

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 18/84 (21%), Positives = 31/84 (36%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
             + EK  E ++EK +    KE+  K   +    ++  ++ + K     E G  EEE EE
Sbjct: 18  LTEDEKLAEAEEEKAEYDALKEEIDKLDAEIDRLEELLDELEAKPAASGEGGGGEEEEEE 77

Query: 61  EGRRRRRRRRRRRKKEREKKRSSR 84
                   R   R  +       +
Sbjct: 78  AKAEAAEFRAYLRGGDDALAEERK 101

This model family represents the major capsid protein component of the heads (capsids) of bacteriophage HK97, phi-105, P27, and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease [Mobile and extrachromosomal element functions, Prophage functions]. Length = 384

>gnl|CDD|219563 pfam07767, Nop53, Nop53 (60S ribosomal biogenesis)

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE--- 57
           E +KE K EKK+++ +  ++K+ +K   +  +  +  E   +E     EEE ++E     
Sbjct: 202 EYEKEVKAEKKRQELERVEEKKLEKMAPEASRLDEMSEGLLEESDDDGEEESDDESAWEG 261

Query: 58  GEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            E E     +  R +RK + ++ +  RRK
Sbjct: 262 FESEYEPINKPVRPKRKTKAQRNKEKRRK 290

This nucleolar family of proteins are involved in 60S ribosomal biogenesis. They are specifically involved in the processing beyond the 27S stage of 25S rRNA maturation. This family contains sequences that bear similarity to the glioma tumour suppressor candidate region gene 2 protein (p60). This protein has been found to interact with herpes simplex type 1 regulatory proteins. Length = 387

>gnl|CDD|237744 PRK14521, rpsP, 30S ribosomal protein S16; Provisional

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKK----EKKKKEEKKKEKKKKEEEEGEEEE 56
           E K E  KE+K+ K   KK K  K K+  KK     EKK  E + +   +K+  E     
Sbjct: 100 EAKFEAWKEEKEGKVNAKKDKLSKAKKAAKKAALEAEKKVNEARAEAVAEKKAAEAAAVA 159

Query: 57  EGEE 60
             E 
Sbjct: 160 AEEA 163

Length = 186

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 124 KICDFGLAR--VEEPDPNKAMTQEVV-TQYYRAPEILMGAR--HYSAAVDVWSVGCIFAE 178
           K+ DFG A              Q +  T  Y APE++ G +   +  A D+WS+GC+  E
Sbjct: 139 KLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLE 198

Query: 179 LL-GRR 183
           +  G+R
Sbjct: 199 MATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|240402 PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Provisional

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 18/43 (41%), Positives = 33/43 (76%)

Query: 12  KEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEE 54
           K   KE+ ++EK++KE  K++++ +K +K++EKKKKE E+ E+
Sbjct: 546 KLDDKEELQREKEEKEALKEQKRLRKLKKQEEKKKKELEKLEK 588

Length = 651

>gnl|CDD|219868 pfam08496, Peptidase_S49_N, Peptidase family S49 N-terminal

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 14/32 (43%), Positives = 22/32 (68%)

Query: 11 KKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK 42
          KKE K  +K ++K +K K K ++KK K+E+ K
Sbjct: 65 KKELKAWEKAEKKAEKAKAKAEKKKAKKEEPK 96

This domain is found to the N-terminus of bacterial signal peptidases of the S49 family (pfam01343). Length = 154

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 36/148 (24%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFG+++      +KA T  V T  Y +PE+  G + Y+   D+W++GC+  EL   +
Sbjct: 142 KIGDFGISK-ILSSKSKAYTV-VGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLK 198

Query: 184 ILFQAQS-PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
             F+A + P   L +++   GT  P                             +S + +
Sbjct: 199 RAFEAANLPALVLKIMS---GTFAP-----------------------------ISDRYS 226

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHP 270
            +   L++ ML  DP+KR  ++  +  P
Sbjct: 227 PDLRQLILSMLNLDPSKRPQLSQIMAQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 37/152 (24%)

Query: 124 KICDFGL-ARVEEPDPN-KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL- 180
           K+ DFG  A++ +      ++   V T Y+ APE ++  + Y   VD+WS+G +  E+  
Sbjct: 156 KLADFGFAAQLTKEKSKRNSV---VGTPYWMAPE-VIKRKDYGPKVDIWSLGIMCIEMAE 211

Query: 181 GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQ 240
           G     + + P++ L LIT   G P  +                    +  S        
Sbjct: 212 GEPPYLR-EPPLRALFLITT-KGIPPLKN------------------PEKWSP------- 244

Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
              E    L + L  DP KR S    L HP+L
Sbjct: 245 ---EFKDFLNKCLVKDPEKRPSAEELLQHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 20/26 (76%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSN 390
           + L+YLHS  ++HRDIK  N+L++ +
Sbjct: 127 QGLEYLHSQNVIHRDIKSDNILLSKD 152

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|185429 PTZ00074, PTZ00074, 60S ribosomal protein L34; Provisional

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 22/40 (55%), Positives = 30/40 (75%)

Query: 8   KEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
            E++K  K+  K+K K+KK+KKKKK+KKKK+  KK  KKK
Sbjct: 95  VEEQKIVKQVLKEKAKQKKQKKKKKKKKKKKTSKKAAKKK 134

Length = 135

>gnl|CDD|185429 PTZ00074, PTZ00074, 60S ribosomal protein L34; Provisional

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 22/41 (53%), Positives = 31/41 (75%)

Query: 7   KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
            +E+K  K+  K+K ++KK++KKKKK+KKKK  KK  KKKK
Sbjct: 95  VEEQKIVKQVLKEKAKQKKQKKKKKKKKKKKTSKKAAKKKK 135

Length = 135

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 21/86 (24%), Positives = 45/86 (52%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           EK++  ++ KKK K+ EK+ +E +++ +  ++ K KKEE ++ KK+      E+ E+  E
Sbjct: 335 EKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELE 394

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRK 86
           E  + +        K   +    +++
Sbjct: 395 ELEKAKEEIEEEISKITARIGELKKE 420

Length = 880

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKE-EKKKEK--KKKEEEEGEEEEEG 58
           K+KEK+ E+   +  E   +  + +E+ +K EK+ KE E+ KE+  + ++E E  E  + 
Sbjct: 196 KEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKR 255

Query: 59  EEEGRRRRRRRRRRRKKEREKKRSSRRK 86
           + E + R    R    K+  ++   + K
Sbjct: 256 KLEEKIRELEERIEELKKEIEELEEKVK 283

Length = 880

>gnl|CDD|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein

 Score = 42.7 bits (100), Expect = 3e-04
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 7   KKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKKEKKKKEEEEGEEEEEGEEEGRR 64
            KE K+  + +K++ EK + E KK  E   K K+ K  + K++ +   +E E+ E E ++
Sbjct: 269 PKEDKQVAENQKREIEKAQIEIKKNDEEALKAKDHKAFDLKQESKASEKEAEDKELEAQK 328

Query: 65  RRRRRRRRRKKEREKKRS 82
           +R       +K + +  +
Sbjct: 329 KREPVAEDLQKTKPQVEA 346

This family consists of several Borrelia P83/P100 antigen proteins. Length = 489

>gnl|CDD|219913 pfam08576, DUF1764, Eukaryotic protein of unknown function (DUF1764)

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 23/64 (35%), Positives = 38/64 (59%)

Query: 3  KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
          K+EKK EK  ++  +      KK++KKKK+  K    K  +K +K++++ +E  E  EE 
Sbjct: 1  KEEKKNEKTDKRDIDDIFSNIKKRKKKKKRTAKTARPKATKKGQKKDKKKDEFPEFPEES 60

Query: 63 RRRR 66
          +RRR
Sbjct: 61 KRRR 64

This is a family of eukaryotic proteins of unknown function. This family contains many hypothetical proteins. Length = 98

>gnl|CDD|220271 pfam09507, CDC27, DNA polymerase subunit Cdc27

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 21/99 (21%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK-------------- 47
            + E + E K   ++   ++E ++KEK+K+K  KK  E + E ++               
Sbjct: 266 DEDEDEDEPKPSGERSDSEEETEEKEKEKRKRLKKMMEDEDEDEEMEIVPESPVEEEESE 325

Query: 48  -------EEEEGEEEEEGEEEGRRRRRRRRRRRKKEREK 79
                   ++E E+EE        RRR RRR  KK+  K
Sbjct: 326 EPEPPPLPKKEEEKEEVTVSPDGGRRRGRRRVMKKKTFK 364

This protein forms the C subunit of DNA polymerase delta. It carries the essential residues for binding to the Pol1 subunit of polymerase alpha, from residues 293-332, which are characterized by the motif D--G--VT, referred to as the DPIM motif. The first 160 residues of the protein form the minimal domain for binding to the B subunit, Cdc1, of polymerase delta, the final 10 C-terminal residues, 362-372, being the DNA sliding clamp, PCNA, binding motif. Length = 427

>gnl|CDD|217348 pfam03064, U79_P34, HSV U79 / HCMV P34

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKE---KKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
            +KK   + +K+  K+KEK++ E  +K +   +KK+EEK++  + K    G     G+  
Sbjct: 151 SRKKSDDEHRKRSGKQKEKRRVEDSQKHKEDRRKKQEEKRRNDEDKRPGGGGGSSGGQSG 210

Query: 62  GRRRRRRRRRRRKKEREKKR 81
              +    + +R+K  + +R
Sbjct: 211 LSTKDEPPKEKRQKHHDPER 230

This family represents herpes virus protein U79 and cytomegalovirus early phosphoprotein P34 (UL112). Length = 238

>gnl|CDD|218752 pfam05793, TFIIF_alpha, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 17/78 (21%), Positives = 42/78 (53%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
           K + ++ +  ++ E++K E++    KK K+ KK + KK    K + + G++ ++ + +G 
Sbjct: 311 KPEIEQDEDSEESEEEKNEEEGGLSKKGKKLKKLKGKKNGLDKDDSDSGDDSDDSDIDGE 370

Query: 64  RRRRRRRRRRKKEREKKR 81
                   +++KE +K+ 
Sbjct: 371 DSVSLVTAKKQKEPKKEE 388

Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) or RNA polymerase II-associating protein 74 (RAP74) is the large subunit of transcription factor IIF (TFIIF), which is essential for accurate initiation and stimulates elongation by RNA polymerase II. Length = 528

>gnl|CDD|220237 pfam09428, DUF2011, Fungal protein of unknown function (DUF2011)

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 16/77 (20%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           K EK+  ++KEKKK++K+  KK++   + + ++ KE  +KEK+                 
Sbjct: 70  KVEKELLREKEKKKKRKRPGKKRRIALRLRRERTKERAEKEKRT---------------- 113

Query: 63  RRRRRRRRRRRKKEREK 79
           R+ R ++ +RR+KE+EK
Sbjct: 114 RKNREKKFKRRQKEKEK 130

This is a family of fungal proteins whose function is unknown. Length = 130

>gnl|CDD|220237 pfam09428, DUF2011, Fungal protein of unknown function (DUF2011)

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 16/50 (32%), Positives = 36/50 (72%), Gaps = 3/50 (6%)

Query: 1   EKKKEKKKEKKK---EKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           +KKK K+  KK+    + + ++ KE+ +KEK+ +K ++KK ++++++K+K
Sbjct: 81  KKKKRKRPGKKRRIALRLRRERTKERAEKEKRTRKNREKKFKRRQKEKEK 130

This is a family of fungal proteins whose function is unknown. Length = 130

>gnl|CDD|150884 pfam10278, Med19, Mediator of RNA pol II transcription subunit 19

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKK 41
           + +  K  EKK +KKK E  K+ KKKKKEKKKK+++ 
Sbjct: 133 DSEGLKGHEKKHKKKKHEDDKERKKKKKEKKKKKKRH 169

Med19 represents a family of conserved proteins which are members of the multi-protein co-activator Mediator complex. Mediator is required for activation of RNA polymerase II transcription by DNA binding transactivators. Length = 178

>gnl|CDD|222571 pfam14153, Spore_coat_CotO, Spore coat protein CotO

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 26/89 (29%), Positives = 52/89 (58%), Gaps = 9/89 (10%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
             +KE++KE   E  K K++++K + E+ +K+++  + E++   +++E+EE  +EEE EE
Sbjct: 36  ADEKEEEKENSDEHVKSKEEEQKIEYEEAEKEKEAGEPEREDIAEQQEKEEIAQEEEKEE 95

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFK 89
           E           +++E    +  R+KPFK
Sbjct: 96  EA-------EDVKQQEVFSFK--RKKPFK 115

Bacillus spores are protected by a protein shell consisting of over 50 different polypeptides, known as the coat. This family of proteins has an important morphogenetic role in coat assembly, it is involved in the assembly of at least 5 different coat proteins including CotB, CotG, CotS, CotSA and CotW. It is likely to act at a late stage of coat assembly. Length = 185

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L Y+H  +ILHRD+K  N+L+  + ILK
Sbjct: 132 LYYIHRNKILHRDMKAANILITKDGILK 159

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 14/20 (70%), Positives = 17/20 (85%)

Query: 367 LKYLHSARILHRDIKPGNLL 386
           L+YLHS  I+HRDIKP N+L
Sbjct: 113 LEYLHSKGIIHRDIKPDNIL 132

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEE 54
           E KK+ +K+KKK+K+K++ K E + K   K  +K KK +KK  K K  E+    
Sbjct: 65  ESKKKSEKKKKKKKEKKEPKSEGETKLGFKTPKKSKKTKKKPPKPKPNEDVDNA 118

Length = 413

>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 13/79 (16%), Positives = 48/79 (60%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           +++KK   KKE++++KK +++ ++ +K++  ++ ++++ +++   E+   + E+  ++  
Sbjct: 56  QQQKKPAAKKEQERQKKLEQQAEEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQAE 115

Query: 63  RRRRRRRRRRRKKEREKKR 81
            ++++    + K+  E K 
Sbjct: 116 EKQKQAEEAKAKQAAEAKA 134

TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346

>gnl|CDD|226894 COG4499, COG4499, Predicted membrane protein [Function unknown]

 Score = 42.1 bits (99), Expect = 4e-04
 Identities = 16/78 (20%), Positives = 41/78 (52%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K        K+++  ++  K+ +   KK  + K + +  ++ + K +EE+ ++EE  +++
Sbjct: 357 KSNTDLSGDKRQELLKEYNKKLQDYTKKLGEVKDETDASEEAEAKAKEEKLKQEENEKKQ 416

Query: 62  GRRRRRRRRRRRKKEREK 79
             +    + +R+K ER+K
Sbjct: 417 KEQADEDKEKRQKDERKK 434

Length = 434

>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase

 Score = 42.2 bits (99), Expect = 4e-04
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEK--------KKKEEKKKEKKKKEEEEG 52
          E +++KKKE+K ++K+ KK K  +K+ K K + +         KK EKK  K+  E+E  
Sbjct: 17 ELERKKKKEEKAKEKELKKLKAAQKEAKAKLQAQQASDGTNVPKKSEKKSRKRDVEDENP 76

Query: 53 EEEEEGEEEGRRRRR 67
          E+  + +    +++R
Sbjct: 77 EDFIDPDTPFGQKKR 91

Length = 1066

>gnl|CDD|217348 pfam03064, U79_P34, HSV U79 / HCMV P34

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 18/84 (21%), Positives = 44/84 (52%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
           KE +   +K+   E +K+  K+KEK++ ++ +K +E +++K++++    E++  G   G 
Sbjct: 145 KECRALSRKKSDDEHRKRSGKQKEKRRVEDSQKHKEDRRKKQEEKRRNDEDKRPGGGGGS 204

Query: 64  RRRRRRRRRRKKEREKKRSSRRKP 87
              +     + +  ++KR     P
Sbjct: 205 SGGQSGLSTKDEPPKEKRQKHHDP 228

This family represents herpes virus protein U79 and cytomegalovirus early phosphoprotein P34 (UL112). Length = 238

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 42.4 bits (100), Expect = 4e-04
 Identities = 16/86 (18%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEK-KKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           ++ E +    +E+ +E + + ++ +E+ ++ KEK +  +++ E+++   EE E+     E
Sbjct: 298 EELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELE 357

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRK 86
           E +     +     +E E+   + R+
Sbjct: 358 EAKEELEEKLSALLEELEELFEALRE 383

Length = 1163

>gnl|CDD|115057 pfam06375, BLVR, Bovine leukaemia virus receptor (BLVR)

 Score = 42.4 bits (99), Expect = 4e-04
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 16/105 (15%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKK----------------KEKKKKEEKKKEK 44
           +K K+ KK++KKEK+KE+ K +KK+ E  K                 +  +         
Sbjct: 197 KKSKKPKKKEKKEKEKERDKDKKKEVEGFKSLLLALDDSPASAASVAEADEASLANTVSG 256

Query: 45  KKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFK 89
              + E  E ++   EE ++  + ++++++KE+E+K+  ++    
Sbjct: 257 TAPDSEPDEPKDAEAEETKKSPKHKKKKQRKEKEEKKKKKKHHHH 301

This family consists of several bovine specific leukaemia virus receptors which are thought to function as transmembrane proteins, although their exact function is unknown. Length = 561

>gnl|CDD|221937 pfam13148, DUF3987, Protein of unknown function (DUF3987)

 Score = 41.9 bits (99), Expect = 4e-04
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
           +E ++E ++E K+ + +KE  + EKK  ++K KK  KK + ++   EE  E E  E E  
Sbjct: 68  EELREEYEEELKEYEAEKEIWEAEKKGLEKKAKKAIKKGKDEEALAEELLELEAEEPEPP 127

Query: 64  RRRR 67
            R R
Sbjct: 128 LRPR 131

A family of uncharacterized proteins found by clustering human gut metagenomic sequences. Length = 379

>gnl|CDD|222581 pfam14181, YqfQ, YqfQ-like protein

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 14/47 (29%), Positives = 28/47 (59%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           E++   + E++   + + + KEKKK+E  K K +K+K + + +K K 
Sbjct: 102 EEESTDETEQEDPPETKTESKEKKKREVPKPKTEKEKPKTEPKKPKP 148

The YqfQ-like protein family includes the B. subtilis YqfQ protein, also known as VrrA, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 146 and 237 amino acids in length. There are two conserved sequence motifs: QYGP and PKLY. Length = 155

>gnl|CDD|220413 pfam09805, Nop25, Nucleolar protein 12 (25kDa)

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 19/61 (31%), Positives = 47/61 (77%)

Query: 2  KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
          K+K+++++K +E+ KEK+++E+ ++ K+ ++E+K++ EK+ +++K+  +  EEE + EE+
Sbjct: 29 KRKQQRRKKAQEEAKEKEREERIEERKRIREERKQELEKQLKERKEALKLLEEENDDEED 88

Query: 62 G 62
           
Sbjct: 89 A 89

Members of this family of proteins are part of the yeast nuclear pore complex-associated pre-60S ribosomal subunit. The family functions as a highly conserved exonuclease that is required for the 5'-end maturation of 5.8S and 25S rRNAs, demonstrating that 5'-end processing also has a redundant pathway. Nop25 binds late pre-60S ribosomes, accompanying them from the nucleolus to the nuclear periphery; and there is evidence for both physical and functional links between late 60S subunit processing and export. Length = 134

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (98), Expect = 4e-04
 Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 41/174 (23%)

Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYS 164
           Y+  +P   L+ YQ   +  +CDFGL ++   D +K  T    T  Y APE+L+G   Y+
Sbjct: 116 YRDLKPENILLDYQGHIA--LCDFGLCKLNMKDDDKTNTF-CGTPEYLAPELLLG-HGYT 171

Query: 165 AAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR 223
            AVD W++G +  E+L G    +          ++ + L  P         DG       
Sbjct: 172 KAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP---------DGFD----- 217

Query: 224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSA---LCHPYLDE 274
                               +A  LL+ +L  DPT+R+  N A     HP+  +
Sbjct: 218 -------------------RDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 13/25 (52%), Positives = 21/25 (84%)

Query: 366 SLKYLHSARILHRDIKPGNLLVNSN 390
           +L+YLHS  I+HRD+KP N+L++ +
Sbjct: 114 ALEYLHSKGIIHRDLKPENILLDKD 138

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|220684 pfam10310, DUF2413, Protein of unknown function (DUF2413)

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 11/71 (15%)

Query: 1   EKKKEKKKEKKKEK-------KKEKKKKEKKKKEKKKKKEKKKKEEKK----KEKKKKEE 49
           EK K  KK K+  +       KK  K  E      ++K  K +K  +       K K   
Sbjct: 45  EKAKPPKKPKEASRPGTPRNPKKSSKPTESSAASSEEKPAKPRKSAESTRSSHPKSKAPS 104

Query: 50  EEGEEEEEGEE 60
            E EEEEE EE
Sbjct: 105 TESEEEEEPEE 115

This is a family of proteins conserved in fungi. The function is not known. Length = 436

>gnl|CDD|222160 pfam13476, AAA_23, AAA domain

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 21/57 (36%), Positives = 38/57 (66%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
           E+ K K+KEKK+  ++ +K+ E+ + EK   ++  +++EKKKE ++ +EE  E  EE
Sbjct: 146 EELKFKRKEKKERLEELEKELEELEDEKDLLEKLLEEKEKKKELEELKEELEELLEE 202

Length = 204

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 41.9 bits (99), Expect = 4e-04
 Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKK-KKEKKKKEEKKKEKKKKEEEEGEEEEEGE 59
             K +   +++ KKK KK   K K +    K+E K+  E KK+  ++ ++         
Sbjct: 4  ASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMV 63

Query: 60 EEGRRRRRRRRRRRKKEREKKRSSRRKP 87
          ++          ++K +   K ++ + P
Sbjct: 64 KDTDDATESDIPKKKTKTAAKAAAAKAP 91

Length = 509

>gnl|CDD|224415 COG1498, SIK1, Protein implicated in ribosomal biogenesis, Nop56p homolog [Translation, ribosomal structure and biogenesis]

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 16/48 (33%), Positives = 29/48 (60%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEE 50
           K+ +K ++K  K   K K E+ KKE+  +  +KKKE+K K +++  + 
Sbjct: 348 KRIEKLKEKPPKPPTKAKPERDKKERPGRYRRKKKEKKAKSERRGLQN 395

Length = 395

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 42.1 bits (98), Expect = 5e-04
 Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKK---EKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
            E+ K K +E KKE +++KKK E+ KK   EKKK    KK+EEKK E+ +KE+E   EEE 
Sbjct: 1726 EENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEEL 1785

Query: 58   GEEEGRRRRRRRRR 71
             EE+ +RR    ++
Sbjct: 1786 DEEDEKRRMEVDKK 1799

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 42.1 bits (98), Expect = 5e-04
 Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE--KKKKEEKKKE---KKKKEEEEGEEE 55
            E + E+  +  +E+KK K ++ KK +E K K E  KK +EEKKK    KKK+ EE+ + E
Sbjct: 1591 EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650

Query: 56   EEGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            E  + E   + +     +K E +KK++   K
Sbjct: 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAK 1681

Length = 2084

>gnl|CDD|237753 PRK14552, PRK14552, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; Provisional

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 14/67 (20%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRR 64
           ++ KE+  ++ +E K+K  K  +KK++++K +K +KKK++KKK              G++
Sbjct: 362 DELKEELNKRIEEIKEKYPKPPKKKREEKKPQKRKKKKKRKKK--------------GKK 407

Query: 65  RRRRRRR 71
           R+++ R+
Sbjct: 408 RKKKGRK 414

Length = 414

>gnl|CDD|226894 COG4499, COG4499, Predicted membrane protein [Function unknown]

 Score = 41.7 bits (98), Expect = 5e-04
 Identities = 17/62 (27%), Positives = 37/62 (59%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E  K+ +   KK  + + +    ++ E K K+EK K+EE +K++K++ +E+ E+ ++ E 
Sbjct: 373 EYNKKLQDYTKKLGEVKDETDASEEAEAKAKEEKLKQEENEKKQKEQADEDKEKRQKDER 432

Query: 61  EG 62
           + 
Sbjct: 433 KK 434

Length = 434

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 20/93 (21%), Positives = 54/93 (58%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K  +++K K+ EK+ +K +KE KK++++ ++ +K+ +E + +++ +EEEE + E+  E+ 
Sbjct: 310 KVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIKREAEEEEEEQLEKLQEKL 369

Query: 62  GRRRRRRRRRRRKKEREKKRSSRRKPFKLSEIS 94
            +       +++ +      +++ K  +L   +
Sbjct: 370 EQLEEELLAKKKLESERLSSAAKLKEEELELKN 402

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|235322 PRK04950, PRK04950, ProP expression regulator; Provisional

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 11/50 (22%), Positives = 30/50 (60%)

Query: 8   KEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
           K K + ++ E++ K+++   +K+K  +++++ K K  +KK +   ++ E 
Sbjct: 107 KAKVQAQRAEQQAKKREAAGEKEKAPRRERKPKPKAPRKKRKPRAQKPEP 156

Length = 213

>gnl|CDD|237035 PRK12280, rplW, 50S ribosomal protein L23; Reviewed

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 18/61 (29%), Positives = 37/61 (60%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRR 64
           E+ ++++KE  KE ++KE  K +K+KK++K+KK  +K  KKK  +      ++  ++   
Sbjct: 93  EESEKEQKEVSKETEEKEAIKAKKEKKEKKEKKVAEKLAKKKSTKTTKNTTKKATKKTTT 152

Query: 65  R 65
           +
Sbjct: 153 K 153

Length = 158

>gnl|CDD|222581 pfam14181, YqfQ, YqfQ-like protein

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           E   E ++E   E K E K+K+K++  K K +++K K E KK K  K
Sbjct: 104 ESTDETEQEDPPETKTESKEKKKREVPKPKTEKEKPKTEPKKPKPSK 150

The YqfQ-like protein family includes the B. subtilis YqfQ protein, also known as VrrA, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 146 and 237 amino acids in length. There are two conserved sequence motifs: QYGP and PKLY. Length = 155

>gnl|CDD|224415 COG1498, SIK1, Protein implicated in ribosomal biogenesis, Nop56p homolog [Translation, ribosomal structure and biogenesis]

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEE 55
           ++E +K  +K K+K  K   K K E+ KK+   +   KKKEKK K E  G + 
Sbjct: 343 REELEKRIEKLKEKPPKPPTKAKPERDKKERPGRYRRKKKEKKAKSERRGLQN 395

Length = 395

>gnl|CDD|221028 pfam11208, DUF2992, Protein of unknown function (DUF2992)

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 16/39 (41%), Positives = 31/39 (79%)

Query: 8   KEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKK 46
           K + +  K+EKKK+ K+KKE++K+++++ K++KKK K +
Sbjct: 92  KLEHERNKQEKKKRSKEKKEEEKERKRQLKQQKKKAKHR 130

This bacterial family of proteins has no known function. However, the cis-regulatory yjdF motif, just upstream from the gene encoding the proteins for this family, is a small non-coding RNA, Rfam:RF01764. The yjdF motif is found in many Firmicutes, including Bacillus subtilis. In most cases, it resides in potential 5' UTRs of homologues of the yjdF gene whose function is unknown. However, in Streptococcus thermophilus, a yjdF RNA motif is associated with an operon whose protein products synthesise nicotinamide adenine dinucleotide (NAD+). Also, the S. thermophilus yjdF RNA lacks typical yjdF motif consensus features downstream of and including the P4 stem. Thus, if yjdF RNAs are riboswitch aptamers, the S. thermophilus RNAs might sense a distinct compound that structurally resembles the ligand bound by other yjdF RNAs. On the ohter hand, perhaps these RNAs have an alternative solution forming a similar binding site, as is observed with some SAM riboswitches. Length = 132

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFG+ +       KA T    T  Y APEIL G + Y+ +VD WS G +  E+L
Sbjct: 136 KIADFGMCKENMNGEGKASTF-CGTPDYIAPEILKGQK-YNESVDWWSFGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|222665 pfam14303, NAM-associated, No apical meristem-associated C-terminal domain

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 18/66 (27%), Positives = 40/66 (60%)

Query: 12  KEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRR 71
           + K+ E +KK K+K  + K K KK++ EK+KEK+++  +   E E+   E  +++   + 
Sbjct: 58  ESKRPEGRKKAKEKLRRDKLKAKKEEAEKEKEKEERFMKALAEAEKERAELEKKKAEAKL 117

Query: 72  RRKKER 77
            +++++
Sbjct: 118 MKEEKK 123

This domain is found in a number of different types of plant proteins including NAM-like proteins. Length = 147

>gnl|CDD|219882 pfam08524, rRNA_processing, rRNA processing

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 25/87 (28%), Positives = 57/87 (65%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           EK+     EK+  +K+ K  KE +K EKKKK ++KK+  K+++++++E+E  + ++E E+
Sbjct: 43  EKEGYAVPEKESAEKQVKSSKEDRKFEKKKKLDEKKEIAKQRKREQREKELAKRQKELEK 102

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKP 87
               +++++ R R++++  K++   +P
Sbjct: 103 IELSKKKQKERERRRKKLTKKTKSGQP 129

This is a family of proteins that are involved in rRNA processing. In a localisation study they were found to localise to the nucleus and nucleolus. The family also includes other metazoa members from plants to mammals where the protein has been named BR22 and is associated with TTF-1, thyroid transcription factor 1. In the lungs, the family binds TTF-1 to form a complex which influences the expression of the key lung surfactant protein-B (SP-B) and -C (SP-C), the small hydrophobic surfactant proteins that maintain surface tension in alveoli. Length = 150

>gnl|CDD|236048 PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated

 Score = 41.7 bits (99), Expect = 5e-04
 Identities = 12/44 (27%), Positives = 16/44 (36%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
             +K EK +       K    KK   K   K K++    EK  K
Sbjct: 814 LAEKPEKLRYLADAPAKDPAGKKAAVKFSRKTKQQYVASEKDGK 857

Length = 859

>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type

 Score = 42.0 bits (99), Expect = 5e-04
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 9/100 (9%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRR 64
           E+ + K  E  +E  + E+K +E K++ E  + E ++ E + +E E   EE E + E  R
Sbjct: 326 EELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLR 385

Query: 65  RRRRRRRRRKK---------EREKKRSSRRKPFKLSEISA 95
            +  +   +           E   +R   R+     EI  
Sbjct: 386 SKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE 425

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. Length = 1179

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 13/26 (50%), Positives = 21/26 (80%)

Query: 369 YLHSARILHRDIKPGNLLVNSNCILK 394
           + HS R+LHRD+KP NLL+++  ++K
Sbjct: 116 FCHSRRVLHRDLKPQNLLIDNKGVIK 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|236877 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 16/83 (19%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E  K +  ++ + K K   +K+  K  KK   ++ +K+EK+KEK K              
Sbjct: 366 EPLKARVIDELRPKTKAPSEKKTGKPSKKVLAKRAEKKEKEKEKPKV------------- 412

Query: 61  EGRRRRRRRRRRRKKEREKKRSS 83
              ++R R  +   K R+   +S
Sbjct: 413 ---KKRHRDTKNIGKRRKPSGTS 432

Length = 434

>gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 18/71 (25%), Positives = 47/71 (66%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
               +   + +  EK+   K +KE + ++E+KK+++KKKE KK+++E+ +++E+  E   
Sbjct: 123 GPPSELGSESETSEKETTAKVEKEAEVEEEEKKEKKKKKEVKKEKKEKKDKKEKMVEPKG 182

Query: 64  RRRRRRRRRRK 74
            +++++++++K
Sbjct: 183 SKKKKKKKKKK 193

5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 41.9 bits (98), Expect = 6e-04
 Identities = 24/81 (29%), Positives = 48/81 (59%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E++ +   ++++E K E  K E++K + ++K ++ +KE KK EK+ K+E+E  EE E E 
Sbjct: 286 EEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKEL 345

Query: 61  EGRRRRRRRRRRRKKEREKKR 81
           +    +R      +++ EK +
Sbjct: 346 KELEIKREAEEEEEEQLEKLQ 366

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|219868 pfam08496, Peptidase_S49_N, Peptidase family S49 N-terminal

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)

Query: 7  KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK 42
          KKE K  +K EKK +   K + K +K+K KKEE K 
Sbjct: 65 KKELKAWEKAEKKAE---KAKAKAEKKKAKKEEPKP 97

This domain is found to the N-terminus of bacterial signal peptidases of the S49 family (pfam01343). Length = 154

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL-LGR 182
           K+CDFG++         A T  V T  Y APE + G   YS   D+WS+G    EL  GR
Sbjct: 141 KLCDFGVSGQLVNS--LAKT-FVGTSSYMAPERIQGN-DYSVKSDIWSLGLSLIELATGR 196

Query: 183 RILFQAQSPVQQLGLITDLL 202
              F           I +LL
Sbjct: 197 ---FPYPPENDPPDGIFELL 213

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|233503 TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, large subunit, splicing factor

 Score = 41.4 bits (97), Expect = 6e-04
 Identities = 15/117 (12%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEE-------EEGE 53
           +++ ++++EK + + +++  +  +++ + + + + +    ++   +++         +  
Sbjct: 2   DEEPDREREKSRGRDRDRSSERPRRRSRDRSRFRDRHRRSRERSYREDSRPRDRRRYDSR 61

Query: 54  EEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQP 110
                     RR R R RRR +        RR+    S  +  R D         +P
Sbjct: 62  SPRSLRYSSVRRSRDRPRRRSRSVRSIEQHRRRLRDRSPSNQWRKDDKKRSLWDIKP 118

These splicing factors consist of an N-terminal arginine-rich low complexity domain followed by three tandem RNA recognition motifs (pfam00076). The well-characterized members of this family are auxilliary components of the U2 small nuclear ribonuclearprotein splicing factor (U2AF). These proteins are closely related to the CC1-like subfamily of splicing factors (TIGR01622). Members of this subfamily are found in plants, metazoa and fungi. Length = 509

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 16/61 (26%), Positives = 28/61 (45%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            KKK K   K    K   KKK K + +  KK EKK   +K  +    ++ +   + + ++
Sbjct: 75  PKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDD 134

Query: 61  E 61
           +
Sbjct: 135 D 135

Length = 509

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 12/103 (11%), Positives = 42/103 (40%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E   E++ +KK +K   K K +    +++ K+  + K++  ++  +         ++ ++
Sbjct: 9   ELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDD 68

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTID 103
                  +++ +   +    ++  +K  K    S+ + +    
Sbjct: 69  ATESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNA 111

Length = 509

>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed

 Score = 41.7 bits (99), Expect = 6e-04
 Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+ + + ++K +E +   K+ EK K+E ++KKEK + EE+ K  ++ E+E  +  +E ++
Sbjct: 526 EELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQ-EEEDKLLEEAEKEAQQAIKEAKK 584

Query: 61  EGRRRRRRRRRRRKKE----REKKRSSRRK 86
           E     +  R+ +K      +  +    RK
Sbjct: 585 EADEIIKELRQLQKGGYASVKAHELIEARK 614

Length = 782

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 14/26 (53%), Positives = 19/26 (73%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSN 390
           K L+YLHS   +HRDIK GN+L+  +
Sbjct: 113 KGLEYLHSNGQIHRDIKAGNILLGED 138

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|233496 TIGR01622, SF-CC1, splicing factor, CC1-like family

 Score = 41.4 bits (97), Expect = 6e-04
 Identities = 19/115 (16%), Positives = 47/115 (40%), Gaps = 13/115 (11%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           + +E+ + +   ++ +K ++  +++ + + + +++++      ++               
Sbjct: 3   RDRERGRLRNDTRRSDKGRERSRRRSRSRDRSRRRRDRDYYRGRRGRSRS---------R 53

Query: 62  GRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQ--ARQPTRQL 114
              R  R R  R   R+ +RS R     L+E  A R D T+   Q   +   R L
Sbjct: 54  SPNRYYRPRGDRSYRRDDRRSGRNTKEPLTE--AERDDRTVFVLQLALKARERDL 106

This model represents a subfamily of RNA splicing factors including the Pad-1 protein (N. crassa), CAPER (M. musculus) and CC1.3 (H.sapiens). These proteins are characterized by an N-terminal arginine-rich, low complexity domain followed by three (or in the case of 4 H. sapiens paralogs, two) RNA recognition domains (rrm: pfam00706). These splicing factors are closely related to the U2AF splicing factor family (TIGR01642). A homologous gene from Plasmodium falciparum was identified in the course of the analysis of that genome at TIGR and was included in the seed. Length = 457

>gnl|CDD|220431 pfam09831, DUF2058, Uncharacterized protein conserved in bacteria (DUF2058)

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 24 KKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEE-EEGEEEGRRRRRRRRRRRKKEREKK 80
          KKK KK KKEK+K+ ++ ++     ++E ++  EE + E   R R   R+R+ E E+K
Sbjct: 14 KKKAKKAKKEKRKQRKQARKGADDGDDELKQAAEEAKAEKAERDRELNRQRQAEAEQK 71

This domain, found in various prokaryotic proteins, has no known function. Length = 177

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 41.4 bits (98), Expect = 7e-04
 Identities = 17/47 (36%), Positives = 38/47 (80%), Gaps = 3/47 (6%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE---KKKKEEKKKEK 44
           +KK    K+K++E+++EK+KKE++K+E++++ E   ++++E+KKK+ 
Sbjct: 431 KKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAEEEKEEEEEKKKKQA 477

Length = 482

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 41.7 bits (97), Expect = 7e-04
 Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 6    KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK-EKKKKEEEEGEEEEEGEEEGRR 64
            +++   K ++  K  + KK +EKKK  E KK EEKKK ++ KK+ EE ++ +E +++   
Sbjct: 1267 RRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEE 1326

Query: 65   RRRRRRRRRKKEREKKRSSRRK 86
             +++    +KK  E K+++   
Sbjct: 1327 AKKKADAAKKKAEEAKKAAEAA 1348

Length = 2084

>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1

 Score = 41.5 bits (98), Expect = 7e-04
 Identities = 14/63 (22%), Positives = 35/63 (55%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
              + +++E +       ++K+ +KK++K +K+ +K+E +K   KKK E   ++ +  + 
Sbjct: 392 LLAEGEEEEGENGNLSPAERKKLRKKQRKAEKKAEKEEAEKAAAKKKAEAAAKKAKGPDG 451

Query: 61  EGR 63
           E +
Sbjct: 452 ETK 454

This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homologue of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle. Length = 516

>gnl|CDD|226894 COG4499, COG4499, Predicted membrane protein [Function unknown]

 Score = 41.3 bits (97), Expect = 7e-04
 Identities = 17/79 (21%), Positives = 38/79 (48%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K  E+ K        ++++  K+  +K +   KK  E K +    +E E   +EE+ ++E
Sbjct: 351 KLYEEVKSNTDLSGDKRQELLKEYNKKLQDYTKKLGEVKDETDASEEAEAKAKEEKLKQE 410

Query: 62  GRRRRRRRRRRRKKEREKK 80
              ++++ +    KE+ +K
Sbjct: 411 ENEKKQKEQADEDKEKRQK 429

Length = 434

>gnl|CDD|185429 PTZ00074, PTZ00074, 60S ribosomal protein L34; Provisional

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 21/34 (61%), Positives = 27/34 (79%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKK 37
           K+  KEK K+KK++KKKK+KKKK+  KK  KKKK
Sbjct: 102 KQVLKEKAKQKKQKKKKKKKKKKKTSKKAAKKKK 135

Length = 135

>gnl|CDD|220271 pfam09507, CDC27, DNA polymerase subunit Cdc27

 Score = 41.0 bits (96), Expect = 7e-04
 Identities = 19/78 (24%), Positives = 40/78 (51%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
            +KK ++KKEKK+  +   K++ E++  K     E++  E    +E+E E+E +   E  
Sbjct: 222 FKKKTKEKKEKKEASESTVKEESEEESGKRDVILEDESAEPTGLDEDEDEDEPKPSGERS 281

Query: 64  RRRRRRRRRRKKEREKKR 81
                   + K++R++ +
Sbjct: 282 DSEEETEEKEKEKRKRLK 299

This protein forms the C subunit of DNA polymerase delta. It carries the essential residues for binding to the Pol1 subunit of polymerase alpha, from residues 293-332, which are characterized by the motif D--G--VT, referred to as the DPIM motif. The first 160 residues of the protein form the minimal domain for binding to the B subunit, Cdc1, of polymerase delta, the final 10 C-terminal residues, 362-372, being the DNA sliding clamp, PCNA, binding motif. Length = 427

>gnl|CDD|217476 pfam03286, Pox_Ag35, Pox virus Ag35 surface protein

 Score = 40.1 bits (94), Expect = 7e-04
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 13 EKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGE 59
           K+ +KK+    +K    KK KKK +EK  E++KK E + ++ EE E
Sbjct: 48 PKQPKKKRPTTPRKPATTKKSKKKDKEKLTEEEKKPESDDDKTEENE 94

Length = 198

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 40.7 bits (95), Expect = 7e-04
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE--VVTQYYRAPEILMGARH 162
           Y  R    + ++  +    K+ DFGL+RV E DP    T     +   + APE +   R 
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAI-AYRK 186

Query: 163 YSAAVDVWSVGCIFAELL 180
           +++A DVWS G +  E++
Sbjct: 187 FTSASDVWSFGIVMWEVM 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 41.1 bits (96), Expect = 7e-04
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  AT    +CDFGL++    D NK       T  Y APE+L+  + Y+  VD WS+G 
Sbjct: 127 ILLDATGHIALCDFGLSKANLTD-NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGV 185

Query: 175 IFAEL 179
           +  E+
Sbjct: 186 LVFEM 190

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 41.1 bits (96), Expect = 7e-04
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 352 RVPLC--INPQSAAFKSLKYLHSARILHRDIKPGNLLVN 388
            + +C  +  + +  ++++YLH  RI+HRDIK  N+ +N
Sbjct: 178 NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN 216

Length = 391

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 40.7 bits (95), Expect = 7e-04
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 33/149 (22%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFG++R+     + A T    T YY +PE L   + Y +  D+WS+GCI  E+    
Sbjct: 145 KIGDFGVSRLLMGSCDLATTF-TGTPYYMSPEAL-KHQGYDSKSDIWSLGCILYEMCCLA 202

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F+ Q+    L ++  ++  PTP                      SL   YS    +  
Sbjct: 203 HAFEGQN---FLSVVLRIVEGPTP----------------------SLPETYSRQLNS-- 235

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
               ++  ML  DP+ R S    L +P++
Sbjct: 236 ----IMQSMLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 41.5 bits (97), Expect = 8e-04
 Identities = 19/106 (17%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
             K  +++    ++    +++E +  +++ +KE++   +  KE K++E+E+  +EEE + 
Sbjct: 232 YLKLNEERIDLLQELLRDEQEEIESSKQELEKEEEILAQVLKENKEEEKEKKLQEEELKL 291

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQ 106
             +     +    K ER K     +   K SE    + +  +   +
Sbjct: 292 LAKEEEELKSELLKLERRKVDDEEKL--KESEKELKKLEKELKKEK 335

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|221275 pfam11861, DUF3381, Domain of unknown function (DUF3381)

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 17/51 (33%), Positives = 35/51 (68%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
             KKEK++E+++E + E+  +E++  E  +K+  K K EK++E ++K++E 
Sbjct: 96  LDKKEKEEEEEEEVEVEELDEEEQIDELLEKELAKLKREKRRENERKQKEI 146

This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 156 to 174 amino acids in length. This domain is found associated with pfam07780, pfam01728. Length = 154

>gnl|CDD|223880 COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKK-KEKKKKEEKKKEKKKKEEEEGEEEEE 57
             + E   E    K KEK K EKK K+ K K K K K + K K + K ++   +   +
Sbjct: 70  PTEPETPPEPTPPKPKEKPKPEKKPKKPKPKPKPKPKPKPKVKPQPKPKKPPSKTAAK 127

Length = 244

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+CDFG++   E   + A T    T +Y APE + G + YS   DVWS+G    E+   R
Sbjct: 145 KLCDFGVS--GELVNSLAGTF-TGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNR 200

Query: 184 ILFQAQSPVQQLGLITDLL 202
             F  +     LG I +LL
Sbjct: 201 FPFPPEGE-PPLGPI-ELL 217

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|220102 pfam09073, BUD22, BUD22

 Score = 41.0 bits (96), Expect = 8e-04
 Identities = 20/57 (35%), Positives = 35/57 (61%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
           +K K KKK KK +KK+ K+  +K  +E+ + +++ K EE  ++    EEEE  + E+
Sbjct: 147 KKGKAKKKTKKSKKKEAKESSDKDDEEESESEDESKSEESAEDDSDDEEEEDSDSED 203

BUD22 has been shown in yeast to be a nuclear protein involved in bud-site selection. It plays a role in positioning the proximal bud pole signal. More recently it has been shown to be involved in ribosome biogenesis. Length = 424

>gnl|CDD|185429 PTZ00074, PTZ00074, 60S ribosomal protein L34; Provisional

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 22/40 (55%), Positives = 30/40 (75%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK 42
            +E+K  K+  K+K K+KK+KKKK+KKKKK+  KK  KKK
Sbjct: 95  VEEQKIVKQVLKEKAKQKKQKKKKKKKKKKKTSKKAAKKK 134

Length = 135

>gnl|CDD|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein

 Score = 41.1 bits (96), Expect = 8e-04
 Identities = 17/89 (19%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKE--------KKKKEEEEG 52
           +   +K++++ ++K++E K   K       K++K+  E +K+E        KK  EE   
Sbjct: 240 QDNADKQRDEVRQKQQEAKNLPKPADTSSPKEDKQVAENQKREIEKAQIEIKKNDEEALK 299

Query: 53  EEEEEGEEEGRRRRRRRRRRRKKEREKKR 81
            ++ +  +  +  +   +    KE E ++
Sbjct: 300 AKDHKAFDLKQESKASEKEAEDKELEAQK 328

This family consists of several Borrelia P83/P100 antigen proteins. Length = 489

>gnl|CDD|217348 pfam03064, U79_P34, HSV U79 / HCMV P34

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 16/78 (20%), Positives = 41/78 (52%)

Query: 6   KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRR 65
           K+  K+KEK++ +  ++ K+  +KK++EK++ +E K+         G+     ++E  + 
Sbjct: 161 KRSGKQKEKRRVEDSQKHKEDRRKKQEEKRRNDEDKRPGGGGGSSGGQSGLSTKDEPPKE 220

Query: 66  RRRRRRRRKKEREKKRSS 83
           +R++    ++  E +   
Sbjct: 221 KRQKHHDPERRLEPQSHE 238

This family represents herpes virus protein U79 and cytomegalovirus early phosphoprotein P34 (UL112). Length = 238

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 40.8 bits (95), Expect = 8e-04
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 33/150 (22%)

Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           K+ DFG  A+V +  P +     V T Y+ APE L+    Y   VD+WS+G +  E++  
Sbjct: 156 KLSDFGFCAQVSKEVPRRKSL--VGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDG 212

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
              +  + P++ + +I D L                            L +L+ +S    
Sbjct: 213 EPPYFNEPPLKAMKMIRDNL-------------------------PPKLKNLHKVSPSLK 247

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           G     L ++L  DP +R +    L HP+L
Sbjct: 248 G----FLDRLLVRDPAQRATAAELLKHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 40.9 bits (96), Expect = 8e-04
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 362 AAFKSLKYLHSAR-ILHRDIKPGNLLVNSN 390
           A  + L YL     I+HRD+KP N+LVNS 
Sbjct: 107 AVLRGLTYLREKHKIMHRDVKPSNILVNSR 136

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 40.3 bits (94), Expect = 8e-04
 Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG AR+    P       V T YY  PEI      Y+   D+WS+GCI  EL   +
Sbjct: 140 KLGDFGSARLLT-SPGAYACTYVGTPYYVPPEIWENMP-YNNKSDIWSLGCILYELCTLK 197

Query: 184 ILFQAQS 190
             FQA S
Sbjct: 198 HPFQANS 204

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|236978 PRK11778, PRK11778, putative inner membrane peptidase; Provisional

 Score = 40.6 bits (96), Expect = 8e-04
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 5  EKKKEKKKEKKKEK-KKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
          E+ KE K+E K     KKE K   K +KK++K++ +  K K K 
Sbjct: 47 EQYKEMKEELKAALLDKKELKAWHKAQKKKEKQEAKAAKAKSKP 90

Length = 330

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 9e-04
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L Y H  R+LHRD+KP NLL++    LK
Sbjct: 116 LAYCHQRRVLHRDLKPQNLLISERGELK 143

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|223880 COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]

 Score = 40.2 bits (94), Expect = 9e-04
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
            + K++ K EKK +K K + K K K K K K + + KK   K   +  
Sbjct: 82  PKPKEKPKPEKKPKKPKPKPKPKPKPKPKVKPQPKPKKPPSKTAAKAP 129

Length = 244

>gnl|CDD|220371 pfam09736, Bud13, Pre-mRNA-splicing factor of RES complex

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 7/93 (7%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
            E+K+E+K+ +K+EK++KE+K+KE  K   +K++ EK+ E+ +K + +       +E+  
Sbjct: 14  IEEKREEKEREKEEKERKEEKEKEWGKGLVQKEEREKRLEELEKAKNKPLARYADDEDYD 73

Query: 64  RRRRRRRRRR-------KKEREKKRSSRRKPFK 89
              + + R         +K++EK     +  +K
Sbjct: 74  EELKEQERWDDPMAQFLRKKKEKTDKKGKPLYK 106

This entry is characterized by proteins with alternating conserved and low-complexity regions. Bud13 together with Snu17p and a newly identified factor, Pml1p/Ylr016c, form a novel trimeric complex. called The RES complex, pre-mRNA retention and splicing complex. Subunits of this complex are not essential for viability of yeasts but they are required for efficient splicing in vitro and in vivo. Furthermore, inactivation of this complex causes pre-mRNA leakage from the nucleus. Bud13 contains a unique, phylogenetically conserved C-terminal region of unknown function. Length = 141

>gnl|CDD|220237 pfam09428, DUF2011, Fungal protein of unknown function (DUF2011)

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 18/50 (36%), Positives = 35/50 (70%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEE 50
           EKKK++K+  KK +   + ++E+ K+  +K+K  +K  EKK ++++KE+E
Sbjct: 80  EKKKKRKRPGKKRRIALRLRRERTKERAEKEKRTRKNREKKFKRRQKEKE 129

This is a family of fungal proteins whose function is unknown. Length = 130

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 41.1 bits (97), Expect = 9e-04
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
             KK+ K   K    K   KK+ K +    KK +KK    K +     ++     +  ++
Sbjct: 74  IPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDD 133

Query: 61  E 61
           +
Sbjct: 134 D 134

Length = 509

>gnl|CDD|218899 pfam06102, DUF947, Domain of unknown function (DUF947)

 Score = 39.6 bits (93), Expect = 9e-04
 Identities = 22/79 (27%), Positives = 41/79 (51%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
             K + K  K + ++ +  KE KK+EK+  KE KK    KK + KK   + + +E  + +
Sbjct: 90  SMKSRLKTLKNKDREREILKEHKKQEKELIKEGKKPYYLKKSEIKKLVLKKKFDELKKSK 149

Query: 62  GRRRRRRRRRRRKKEREKK 80
              +   ++R++   +EKK
Sbjct: 150 QLDKALEKKRKKNAGKEKK 168

Family of eukaryotic proteins with unknown function. Length = 168

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + +LH   ILHRD+K  NLL+N+  ILK
Sbjct: 119 VAHLHDNWILHRDLKTSNLLLNNRGILK 146

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           C+  Q    + L+YLH   I+HRD+K  NLL+     LK
Sbjct: 112 CLMLQ--LLRGLQYLHENFIIHRDLKVSNLLLTDKGCLK 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L + HS R+LHRD+KP NLL+N+   +K
Sbjct: 113 LAFCHSHRVLHRDLKPQNLLINTEGAIK 140

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCI 392
            KSL ++H   I HRDIKP N+L+  + +
Sbjct: 110 LKSLDHMHRNGIFHRDIKPENILIKDDIL 138

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 12/63 (19%), Positives = 33/63 (52%)

Query: 30  KKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFK 89
             K+  KK +K  EK +K+ EE ++E++ +    +++       K+++E+++    +  +
Sbjct: 404 GSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEAE 463

Query: 90  LSE 92
             +
Sbjct: 464 EEK 466

Length = 482

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 40.9 bits (94), Expect = 0.001
 Identities = 14/26 (53%), Positives = 21/26 (80%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSN 390
            +L+YLHS  I+HRDIKP N+L++ +
Sbjct: 112 SALEYLHSKGIIHRDIKPENILLDRD 137

Length = 384

>gnl|CDD|220383 pfam09756, DDRGK, DDRGK domain

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 19/68 (27%), Positives = 53/68 (77%), Gaps = 7/68 (10%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEE------ 54
          E+++ ++++K +EK++ ++K+E++ +E+++KK+++++ ++++E+ +KE+EE E+      
Sbjct: 24 EEEEREERKKLEEKREGERKEEEELEEEREKKKEEEERKEREEQARKEQEEYEKLKSSFV 83

Query: 55 -EEEGEEE 61
           EEEG ++
Sbjct: 84 VEEEGTDK 91

This is a family of proteins of approximately 300 residues, found in plants and vertebrates. They contain a highly conserved DDRGK motif. Length = 189

>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168)

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 2/62 (3%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E + E+ ++K++EKK++ ++K  KK+ K++KK++KKK  KKK+ KK  ++E +E  +  E
Sbjct: 62  ETEDEEFQQKREEKKRKDEEKTAKKRAKRQKKKQKKK--KKKKAKKGNKKEEKEGSKSSE 119

Query: 61  EG 62
           E 
Sbjct: 120 ES 121

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 142

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 2  KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
             ++    ++E KK   ++  + +E K+++++    E K++K   E+E+ E EEE EEE
Sbjct: 39 SPSDQAAADEQEAKKSDDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEE 98

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|237744 PRK14521, rpsP, 30S ribosomal protein S16; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 19/59 (32%), Positives = 25/59 (42%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
             K KK  KK   + EKK  E + +   +KK  +      +E    EEEE EE    E 
Sbjct: 121 LSKAKKAAKKAALEAEKKVNEARAEAVAEKKAAEAAAVAAEEAAAAEEEEAEEAPAEEA 179

Length = 186

>gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            + K+K ++KKK+KK++K+ K + + +   K  KK K+ KKK  K K  E+ +       
Sbjct: 64  NESKKKSEKKKKKKKEKKEPKSEGETKLGFKTPKKSKKTKKKPPKPKPNEDVDNAFNKIA 123

Query: 61  EGRRRRR 67
           E   +  
Sbjct: 124 ELAEKSN 130

Length = 413

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 21/88 (23%), Positives = 40/88 (45%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
             + +E   E+  EK+KE+  KE++++  K+    K++          E EE EE    +E
Sbjct: 936  SEPEELLLEEADEKEKEEDNKEEEEERNKRLLLAKEELGNVNLMAIAEFEEKEERYNKDE 995

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRKPF 88
              + R    ++   +E  ++   R K F
Sbjct: 996  LKKERLEEEKKELLREIIEETCQRFKEF 1023

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 28/61 (45%), Positives = 41/61 (67%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+K   KKE+++E+K E   KEK+  E+++K EK K EE+K+EK K +EEE    EE  +
Sbjct: 753 EEKSRLKKEEEEEEKSELSLKEKELAEEEEKTEKLKVEEEKEEKLKAQEEELRALEEELK 812

Query: 61  E 61
           E
Sbjct: 813 E 813

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|240402 PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Provisional

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 21/78 (26%), Positives = 47/78 (60%), Gaps = 10/78 (12%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKK-----EE--KKKEKKKKEEEEG- 52
           E ++EK++++  +++K  +K +K++++KKK+ EK +K      E  K++E K    +E  
Sbjct: 552 ELQREKEEKEALKEQKRLRKLKKQEEKKKKELEKLEKAKIPPAEFFKRQEDKYSAFDETG 611

Query: 53  --EEEEEGEEEGRRRRRR 68
               + +GEE  ++ R++
Sbjct: 612 LPTHDADGEEISKKERKK 629

Length = 651

>gnl|CDD|219868 pfam08496, Peptidase_S49_N, Peptidase family S49 N-terminal

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 20 KKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
          KKE K  EK +KK +K K + +K+K KKEE +
Sbjct: 65 KKELKAWEKAEKKAEKAKAKAEKKKAKKEEPK 96

This domain is found to the N-terminus of bacterial signal peptidases of the S49 family (pfam01343). Length = 154

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 6/42 (14%)

Query: 354 PLCINPQSAAFKS------LKYLHSARILHRDIKPGNLLVNS 389
           PL  N Q+  F +      LKYLH  +I+HRDIK  N+LVN+
Sbjct: 102 PLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT 143

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional

 Score = 41.2 bits (97), Expect = 0.001
 Identities = 27/148 (18%), Positives = 62/148 (41%), Gaps = 6/148 (4%)

Query: 1    EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            E+  E+++E ++++  ++++ + K K K  K  K K ++K+K+KKK   ++ ++      
Sbjct: 1138 EEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGN 1197

Query: 61   EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT 120
              R     +R+   K   KK +S     +  E   T+P        +     +     ++
Sbjct: 1198 SKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKK------SSVKRLKSKKNNSS 1251

Query: 121  YSSKICDFGLARVEEPDPNKAMTQEVVT 148
             SS+  D   +     +       + V+
Sbjct: 1252 KSSEDNDEFSSDDLSKEGKPKNAPKRVS 1279

Length = 1388

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 21/85 (24%), Positives = 44/85 (51%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+ +E +KE +  +  ++K +EK ++ +++ +E KK+ E+ +EK K+ +E  E+ EE  +
Sbjct: 238 EEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIK 297

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRR 85
                       R+ E+   R    
Sbjct: 298 LSEFYEEYLDELREIEKRLSRLEEE 322

Length = 880

>gnl|CDD|150884 pfam10278, Med19, Mediator of RNA pol II transcription subunit 19

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)

Query: 9   EKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEG 52
           + +  K  EKK K KKK E  K+++KKKKE+KKK+K+   E  G
Sbjct: 133 DSEGLKGHEKKHK-KKKHEDDKERKKKKKEKKKKKKRHSPEHPG 175

Med19 represents a family of conserved proteins which are members of the multi-protein co-activator Mediator complex. Mediator is required for activation of RNA polymerase II transcription by DNA binding transactivators. Length = 178

>gnl|CDD|222581 pfam14181, YqfQ, YqfQ-like protein

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 14/46 (30%), Positives = 28/46 (60%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKK 46
           ++ +++   + K + KEKKK+E  K + +K+K K + ++ K  K K
Sbjct: 107 DETEQEDPPETKTESKEKKKREVPKPKTEKEKPKTEPKKPKPSKPK 152

The YqfQ-like protein family includes the B. subtilis YqfQ protein, also known as VrrA, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 146 and 237 amino acids in length. There are two conserved sequence motifs: QYGP and PKLY. Length = 155

>gnl|CDD|220413 pfam09805, Nop25, Nucleolar protein 12 (25kDa)

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 22/63 (34%), Positives = 45/63 (71%), Gaps = 2/63 (3%)

Query: 2  KKKEKKKEKKKEKKKEKKKKEKKK--KEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGE 59
          ++++K +E+ KEK++E++ +E+K+  +E+K++ EK+ KE K+  K  +EE + EE+ E E
Sbjct: 33 QRRKKAQEEAKEKEREERIEERKRIREERKQELEKQLKERKEALKLLEEENDDEEDAETE 92

Query: 60 EEG 62
          +  
Sbjct: 93 DTE 95

Members of this family of proteins are part of the yeast nuclear pore complex-associated pre-60S ribosomal subunit. The family functions as a highly conserved exonuclease that is required for the 5'-end maturation of 5.8S and 25S rRNAs, demonstrating that 5'-end processing also has a redundant pathway. Nop25 binds late pre-60S ribosomes, accompanying them from the nucleolus to the nuclear periphery; and there is evidence for both physical and functional links between late 60S subunit processing and export. Length = 134

>gnl|CDD|222160 pfam13476, AAA_23, AAA domain

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 25/61 (40%), Positives = 42/61 (68%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +++ E+ K K+KEKK+  ++ EK+ +E + +K+  +K  ++KEKKK+ EE  EE EE  E
Sbjct: 142 QERLEELKFKRKEKKERLEELEKELEELEDEKDLLEKLLEEKEKKKELEELKEELEELLE 201

Query: 61  E 61
           E
Sbjct: 202 E 202

Length = 204

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEE 49
           E    KKK K   K    K   KKK + +    KK +++   +K     
Sbjct: 71  ESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLN 119

Length = 509

>gnl|CDD|224415 COG1498, SIK1, Protein implicated in ribosomal biogenesis, Nop56p homolog [Translation, ribosomal structure and biogenesis]

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKK 45
           EK KEK  +   + K E+ KKE+  + ++KKKEKK K E++  + 
Sbjct: 351 EKLKEKPPKPPTKAKPERDKKERPGRYRRKKKEKKAKSERRGLQN 395

Length = 395

>gnl|CDD|222665 pfam14303, NAM-associated, No apical meristem-associated C-terminal domain

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 18/59 (30%), Positives = 40/59 (67%), Gaps = 3/59 (5%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKK---EKKKKEEEEGEEEEE 57
           +KK K+K ++ + K +K++ EK+K+++++  +   + EK++   EKKK E +  +EE++
Sbjct: 65  RKKAKEKLRRDKLKAKKEEAEKEKEKEERFMKALAEAEKERAELEKKKAEAKLMKEEKK 123

This domain is found in a number of different types of plant proteins including NAM-like proteins. Length = 147

>gnl|CDD|236978 PRK11778, PRK11778, putative inner membrane peptidase; Provisional

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 15/45 (33%), Positives = 26/45 (57%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKK 45
          E+ KE K+E K     +K+ K   K +KKK+K++ K  + K + +
Sbjct: 47 EQYKEMKEELKAALLDKKELKAWHKAQKKKEKQEAKAAKAKSKPR 91

Length = 330

>gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 23/63 (36%), Positives = 33/63 (52%)

Query: 36  KKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISA 95
           KK E+  EK K+E E+   EE   E+ + + R R R R+ ER  K SS     ++SE   
Sbjct: 579 KKREEAVEKAKREAEQKAREEREREKEKEKEREREREREAERAAKASSSSHESRMSEPQL 638

Query: 96  TRP 98
           + P
Sbjct: 639 SGP 641

Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity. Length = 979

>gnl|CDD|222977 PHA03089, PHA03089, late transcription factor VLTF-4; Provisional

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 7  KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
          +   KK  KK+K    KKK  KK KK KKK++E+  E   +E  + EE EE ++
Sbjct: 44 EIPSKKTSKKKKTTPRKKKTTKKTKK-KKKEKEEVPELAAEELSDSEENEENDK 96

Length = 191

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG+ARV       A T  + T YY +PEI    R Y+   D+W++GC+  E+   +
Sbjct: 141 KLGDFGIARVLNSTVELARTC-IGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLK 198

Query: 184 ILFQA 188
             F+A
Sbjct: 199 HAFEA 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 14/56 (25%), Positives = 22/56 (39%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEE 56
           +K + + K+K   + K+K   E K    K   E K   EK    K  E+    +  
Sbjct: 201 KKAEAEAKKKAAAEAKKKAAAEAKAAAAKAAAEAKAAAEKAAAAKAAEKAAAAKAA 256

Length = 387

>gnl|CDD|202096 pfam02029, Caldesmon, Caldesmon

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 29/89 (32%), Positives = 56/89 (62%), Gaps = 5/89 (5%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           EK K+K++E   E ++ KKK+E+++K  +++++++K+EE  ++ +++EE+   +EE    
Sbjct: 203 EKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEADRKSREEEEKRRLKEEI--- 259

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFK 89
              RRR     +R+K  E   S  +KPFK
Sbjct: 260 --ERRRAEAAEKRQKVPEDGLSEDKKPFK 286

Length = 431

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)

Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S K+ DFG      P+ +K  T  V T Y+ APE++   + Y   VD+WS+G +  E++ 
Sbjct: 153 SVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVE 210

Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
               +  ++P++ L LI    GTP    PE +
Sbjct: 211 GEPPYLNENPLRALYLIAT-NGTPELQNPERL 241

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|219901 pfam08555, DUF1754, Eukaryotic family of unknown function (DUF1754)

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query: 6  KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
            K K K KK + KKK+KKKK+K K KE+   E++++EK   E +  E EE+ + E 
Sbjct: 7  GGKLKLKGKKIDVKKKKKKKKKKNKSKEEVVTEKEEEEKSSAESDLKEGEEDEDNEK 63

This is a eukaryotic protein family of unknown function. Length = 90

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 14/24 (58%), Positives = 20/24 (83%)

Query: 366 SLKYLHSARILHRDIKPGNLLVNS 389
           +L+YLH+  I+HRD+KP NLL+ S
Sbjct: 113 ALEYLHNYGIVHRDLKPDNLLITS 136

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|227446 COG5116, RPN2, 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 11  KKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
           K   + ++K KEK   +K+ K E    E + +    K+ EE   +  
Sbjct: 792 KAAARAKQKPKEKGPNDKEIKIESPSVETEGERCTIKQREEKGIDAP 838

Length = 926

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S K+ DFG      P+ +K  +  V T Y+ APE++   + Y   VD+WS+G +  E++ 
Sbjct: 154 SVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE 211

Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
               +  ++P++ L LI    GTP    PE++
Sbjct: 212 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 242

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|218336 pfam04935, SURF6, Surfeit locus protein 6

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 26/55 (47%), Positives = 44/55 (80%), Gaps = 4/55 (7%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKE----KKKKEEKKKEKKKKEEEEG 52
           K+KEK+K+K K++ KE+K+K +KKK +++KK     KK+K++KK +KKKK +++G
Sbjct: 149 KRKEKQKKKSKKEWKERKEKVEKKKAERQKKREENLKKRKDDKKNKKKKKAKKKG 203

The surfeit locus protein SURF-6 is shown to be a component of the nucleolar matrix and has a strong binding capacity for nucleic acids. Length = 206

>gnl|CDD|218336 pfam04935, SURF6, Surfeit locus protein 6

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEK--KKKEEKKKEKKKKEEEEGEEEEEG 58
           E+  E K  + +EK+K  K   K +  K K  EK  KK  ++K+++KKK ++E +E +E 
Sbjct: 109 EELDEDKAAEIEEKEKWTKALAKAEGVKVKDDEKLLKKALKRKEKQKKKSKKEWKERKEK 168

Query: 59  EEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            E+ +  R+++R    K+R+  + +++K
Sbjct: 169 VEKKKAERQKKREENLKKRKDDKKNKKK 196

The surfeit locus protein SURF-6 is shown to be a component of the nucleolar matrix and has a strong binding capacity for nucleic acids. Length = 206

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S K+ DFG      P+ +K  T  V T Y+ APE++   + Y   VD+WS+G +  E++ 
Sbjct: 153 SVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVE 210

Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
               +  ++P++ L LI    GTP    PE++
Sbjct: 211 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 241

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSN 390
             L+YLH    +HRDIK  N+L++  
Sbjct: 109 LGLEYLHEEGKIHRDIKAANILLSEE 134

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane]

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 17/80 (21%), Positives = 38/80 (47%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E KK+ ++  K  ++ + K +    K+K + + K   E+ K E + K + E + E   EE
Sbjct: 168 EAKKKAEEAAKAAEEAKAKAEAAAAKKKAEAEAKAAAEKAKAEAEAKAKAEKKAEAAAEE 227

Query: 61  EGRRRRRRRRRRRKKEREKK 80
           +    +++   + K ++   
Sbjct: 228 KAAAEKKKAAAKAKADKAAA 247

Length = 387

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 112 RQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVW 170
            +      +++    D  L R  +    +      V T  Y APE+L G   Y    D W
Sbjct: 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWW 214

Query: 171 SVGCIFAELLGRRILFQAQSPVQ 193
           S+G I  E+L     F + +  +
Sbjct: 215 SLGVILYEMLYGFPPFYSDTLQE 237

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 13/21 (61%), Positives = 17/21 (80%)

Query: 367 LKYLHSARILHRDIKPGNLLV 387
           + YLHS  +LHRD+KP N+LV
Sbjct: 121 VHYLHSNWVLHRDLKPANILV 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           K + + H  R+LHRD+KP NLL+N    LK
Sbjct: 111 KGIAFCHENRVLHRDLKPQNLLINKRGELK 140

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 20  KKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKEREK 79
           ++E +     KK  KK K+  +K  +KK EEE +E+++    G+++       ++K+ E+
Sbjct: 396 EEEIEFLTGSKKATKKIKKIVEK-AEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEE 454

Query: 80  KRSSRRKPFKLSEISATRPDS 100
           K     +  +  E    +   
Sbjct: 455 KEEEEEEAEEEKEEEEEKKKK 475

Length = 482

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 39.4 bits (93), Expect = 0.002
 Identities = 12/23 (52%), Positives = 20/23 (86%)

Query: 367 LKYLHSARILHRDIKPGNLLVNS 389
           L+YLHS  I++RD+KP N+L+++
Sbjct: 106 LEYLHSLGIIYRDLKPENILLDA 128

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510)

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 14/59 (23%), Positives = 32/59 (54%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGE 59
           E+K+    E K++K   +K+ E+ ++E +++ E+   E +K+ ++K E    +E     
Sbjct: 68  EEKEAANSEDKEDKGDAEKEDEESEEENEEEDEESSDENEKETEEKTESNVEKEITNPS 126

This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214

>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 3   KKEKKKEKKKEKKKEK--KKKEKKKKEKKKKKEKK-KKEEKKKEKKKKEEEEGEEEEEGE 59
           K    + +++E +       + KK ++K++K EKK +KEE +K   KK+ E   ++ +G 
Sbjct: 390 KPLLAEGEEEEGENGNLSPAERKKLRKKQRKAEKKAEKEEAEKAAAKKKAEAAAKKAKGP 449

Query: 60  EE 61
           + 
Sbjct: 450 DG 451

This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homologue of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle. Length = 516

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 18/105 (17%), Positives = 49/105 (46%), Gaps = 2/105 (1%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           + K ++++ +  E++ +++ +  ++++   ++E+K KEE+ +E   + +EE + E+  EE
Sbjct: 796 KLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEE 855

Query: 61  EGRRRRRRRRRR--RKKEREKKRSSRRKPFKLSEISATRPDSTID 103
           E  R      +    ++   K+     +  K    S    +    
Sbjct: 856 ELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEK 900

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 9  EKKKEKKKEKKKK-EKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRR 67
          E + EKK   +++ E+KKK+++K KEK+ K+ K  +K+ K + + ++  +G    ++  +
Sbjct: 5  ESEAEKKILTEEELERKKKKEEKAKEKELKKLKAAQKEAKAKLQAQQASDGTNVPKKSEK 64

Query: 68 RRRRRRKKERE 78
          + R+R  ++  
Sbjct: 65 KSRKRDVEDEN 75

Length = 1066

>gnl|CDD|240402 PTZ00399, PTZ00399, cysteinyl-tRNA-synthetase; Provisional

 Score = 40.0 bits (94), Expect = 0.002
 Identities = 14/42 (33%), Positives = 33/42 (78%)

Query: 10  KKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
           K  +K++ +++KE+K+  K++K+ +K K++++K+KK+ E+ E
Sbjct: 546 KLDDKEELQREKEEKEALKEQKRLRKLKKQEEKKKKELEKLE 587

Length = 651

>gnl|CDD|214661 smart00435, TOPEUc, DNA Topoisomerase I (eukaryota)

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 20/79 (25%), Positives = 41/79 (51%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
             K + K+ KK     E     K+K + K +++ +K + + KEKKK++++E +++++ E 
Sbjct: 288 ALKYQLKRLKKMILLFEMISDLKRKLKSKFERDNEKLDAEVKEKKKEKKKEEKKKKQIER 347

Query: 61  EGRRRRRRRRRRRKKEREK 79
              R  +   +   KE  K
Sbjct: 348 LEERIEKLEVQATDKEENK 366

DNA Topoisomerase I (eukaryota), DNA topoisomerase V, Vaccina virus topoisomerase, Variola virus topoisomerase, Shope fibroma virus topoisomeras. Length = 391

>gnl|CDD|235322 PRK04950, PRK04950, ProP expression regulator; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 10/52 (19%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 1   EKKKEKKKEKKKE--KKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEE 50
            ++ E++ +K++   +K++  ++E+K K K  +K++K + +K + +     +
Sbjct: 112 AQRAEQQAKKREAAGEKEKAPRRERKPKPKAPRKKRKPRAQKPEPQHTPVSD 163

Length = 213

>gnl|CDD|220102 pfam09073, BUD22, BUD22

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 21/60 (35%), Positives = 39/60 (65%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           + K KK + KK+ KK KKK+ K+  +K  ++E + ++E K E+  +++ + EEEE+ + E
Sbjct: 143 ETKAKKGKAKKKTKKSKKKEAKESSDKDDEEESESEDESKSEESAEDDSDDEEEEDSDSE 202

BUD22 has been shown in yeast to be a nuclear protein involved in bud-site selection. It plays a role in positioning the proximal bud pole signal. More recently it has been shown to be involved in ribosome biogenesis. Length = 424

>gnl|CDD|217756 pfam03839, Sec62, Translocation protein Sec62

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKK-------EKKKKEEKKKEKKKKEE 49
          + K  K K   +   K   + +  +K K   K       +K   +EKK+EKKK ++
Sbjct: 20 KYKANKDKGNPEIYNKINSQDKAIEKFKLLIKAQMAERVKKLHSQEKKEEKKKPKK 75

Length = 217

>gnl|CDD|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 14/91 (15%), Positives = 41/91 (45%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           ++ +KK+    + +++    +    +++ +  +K++E K   K        E+++  E +
Sbjct: 220 EELDKKQIDADKAQQKADFAQDNADKQRDEVRQKQQEAKNLPKPADTSSPKEDKQVAENQ 279

Query: 62  GRRRRRRRRRRRKKEREKKRSSRRKPFKLSE 92
            R   + +   +K + E  ++   K F L +
Sbjct: 280 KREIEKAQIEIKKNDEEALKAKDHKAFDLKQ 310

This family consists of several Borrelia P83/P100 antigen proteins. Length = 489

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E+ +E + E ++ +++ ++ KEK +  K++ +E++   E+ ++   + EE  EE EE   
Sbjct: 309 ERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEE--- 365

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRR 85
             +            E  ++  +  
Sbjct: 366 --KLSALLEELEELFEALREELAEL 388

Length = 1163

>gnl|CDD|222160 pfam13476, AAA_23, AAA domain

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 17/57 (29%), Positives = 39/57 (68%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
            K K K+K+++ E+ +++ ++ + +K+  +K  ++K+++K+ E+ K+E EE  EE E
Sbjct: 148 LKFKRKEKKERLEELEKELEELEDEKDLLEKLLEEKEKKKELEELKEELEELLEELE 204

Length = 204

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 10/60 (16%), Positives = 26/60 (43%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
             K    +   +KK + +    KK EKK   +K       K+     + + +++++ +++
Sbjct: 82  AAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDD 141

Length = 509

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 2/103 (1%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E++ +KK +K   K K K      K+E K+  E KKK  ++ ++         ++ +   
Sbjct: 13  EEEAKKKLKKLAAKSKSKGFIT--KEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDAT 70

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPDSTID 103
           E    +++ +   K    K  + ++   +L         + +D
Sbjct: 71  ESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALD 113

Length = 509

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 7/61 (11%), Positives = 29/61 (47%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
              +   +KK + + +  KK +KK    K  +    ++     +  ++++ +++++ +++
Sbjct: 86  AAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDD 145

Query: 62  G 62
            
Sbjct: 146 D 146

Length = 509

>gnl|CDD|222977 PHA03089, PHA03089, late transcription factor VLTF-4; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           KK  KK+K   +KK+  KK KKKK++K++  +   EE    ++ +E ++  + E  + + 
Sbjct: 48  KKTSKKKKTTPRKKKTTKKTKKKKKEKEEVPELAAEELSDSEENEENDKKVDYELPKVQN 107

Length = 191

>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEG--- 58
           K+ EK++   +E+KK+ ++  K+   K+K+ E+   +     K K E E           
Sbjct: 104 KQLEKERLAAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAAAKAKAEAEAKRAAAAAKKA 163

Query: 59  EEEGRRRRRRRRRRRKKEREKKR 81
             E +++      ++     KK+
Sbjct: 164 AAEAKKKAEAEAAKKAAAEAKKK 186

Length = 387

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 8/97 (8%)

Query: 124 KICDFGLARVEEPDPNKA---MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           +I DFG A         A     Q + T  + APE+L G   Y  + DVWSVGC+  E+ 
Sbjct: 144 RIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMA 202

Query: 181 GRRILFQAQSPVQQLGLITDL---LGTPT-PEEMRHA 213
             +  + A+     L LI  +      P+ PE +   
Sbjct: 203 TAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPG 239

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y

 Score = 39.9 bits (94), Expect = 0.002
 Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKK---KKKEKK-KKEEKKKEKKKKEEEEGEEEE 56
             KKE   E K+E  K + + E++ KE++   ++ E++  + E+  ++K +  ++ EE  
Sbjct: 47  TLKKEALLEAKEEVHKLRAELERELKERRNELQRLERRLLQREETLDRKMESLDKKEENL 106

Query: 57  EGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISA 95
           E +E+    + +    +++E E+  + +R+  +L  IS 
Sbjct: 107 EKKEKELSNKEKNLDEKEEELEELIAEQRE--ELERISG 143

Members of this family are RNase Y, an endoribonuclease. The member from Bacillus subtilis, YmdA, has been shown to be involved in turnover of yitJ riboswitch [Transcription, Degradation of RNA]. Length = 514

>gnl|CDD|240289 PTZ00144, PTZ00144, dihydrolipoamide succinyltransferase; Provisional

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 16/85 (18%), Positives = 20/85 (23%), Gaps = 6/85 (7%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
                         K EK   EK K      +     +       K  E     +     
Sbjct: 122 GAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTP 181

Query: 61  EGRRRRRRRR------RRRKKEREK 79
             R   R  R      R+R  ER K
Sbjct: 182 VARADPRETRVPMSRMRQRIAERLK 206

Length = 418

>gnl|CDD|149343 pfam08229, SHR3_chaperone, ER membrane protein SH3

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 9   EKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           E K  K  E+   E+ +     K+E+  + EKK+ KKKK
Sbjct: 158 EWKDAKLLEEFAAEEAEAAAAAKEEESAEGEKKESKKKK 196

This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs). SH3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of SH3, AAPs are retained in the ER. Length = 196

>gnl|CDD|217203 pfam02724, CDC45, CDC45-like protein

 Score = 40.0 bits (94), Expect = 0.002
 Identities = 14/45 (31%), Positives = 31/45 (68%)

Query: 38  EEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRKKEREKKRS 82
           EE ++  K +++E+ +++++ ++   R R   RRRR++E E+KR+
Sbjct: 135 EEDEESSKSEDDEDDDDDDDDDDIATRERSLERRRRRREWEEKRA 179

CDC45 is an essential gene required for initiation of DNA replication in S. cerevisiae, forming a complex with MCM5/CDC46. Homologues of CDC45 have been identified in human, mouse and smut fungus among others. Length = 583

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFG+ +      N+A T    T  Y APEIL G + Y+ +VD WS G +  E+L
Sbjct: 136 KIADFGMCKENVFGDNRASTF-CGTPDYIAPEILQGLK-YTFSVDWWSFGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 355 LCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNS 389
           L I  +    + L+YLH+ RI+HRD+K  N+ +N 
Sbjct: 160 LII--EKQILEGLRYLHAQRIIHRDVKTENIFIND 192

Length = 357

>gnl|CDD|220838 pfam10659, Trypan_glycop_C, Trypanosome variant surface glycoprotein C-terminal domain

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%)

Query: 2  KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEK--------KKKEEKKKEKKKKEEEEGE 53
           K E K++  K  KKE   K K K+ K KK           +   EK K KK K++ +  
Sbjct: 7  TKTECKEKGCKWDKKEDDGKCKPKEGKAKKNGAPVTQTAGTETTTEKCKGKKDKKDCKKG 66

Query: 54 EEEEGEE 60
           + EG  
Sbjct: 67 CKWEGNT 73

The trypanosome parasite expresses these proteins to evade the immune response. Length = 98

>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)

Query: 1  EKKKEKKKEKKKEKKKEKK------KKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEE 54
           K+K  KK+ KK KK          +   + +E + K+  KKK++KKK+KKKK   E  +
Sbjct: 17 NKQKGTKKKNKKSKKDVDDDDAFLAELISENQEAENKQNNKKKKKKKKKKKKKNLGEAYD 76

Length = 470

>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 9/68 (13%)

Query: 2  KKKEKKKEKKKEKKKEKKKKEKKK---------KEKKKKKEKKKKEEKKKEKKKKEEEEG 52
          + K++K++ K++  K+K KK KK          +   + +E + K+  KK+KKKK++++ 
Sbjct: 9  EVKQQKQQNKQKGTKKKNKKSKKDVDDDDAFLAELISENQEAENKQNNKKKKKKKKKKKK 68

Query: 53 EEEEEGEE 60
          +   E  +
Sbjct: 69 KNLGEAYD 76

Length = 470

>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 36 KKEEKKKEKKKKEEEEGEEEEEGEE 60
             E+KKE++++EEE+ E EEE   
Sbjct: 75 AAAEEKKEEEEEEEEKEESEEEAAA 99

Length = 106

>gnl|CDD|220252 pfam09468, RNase_H2-Ydr279, Ydr279p protein family (RNase H2 complex component)

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 8   KEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKK 46
            E + EKK++ K++ KKKK K+ K  K  K+   K  KK
Sbjct: 244 AESRAEKKRKSKEEIKKKKPKESKGVKALKKVVAKGMKK 282

RNases H are enzymes that specifically hydrolyse RNA when annealed to a complementary DNA and are present in all living organisms. In yeast RNase H2 is composed of a complex of three proteins (Rnh2Ap, Ydr279p and Ylr154p), this family represents the homologues of Ydr279p. It is not known whether non yeast proteins in this family fulfil the same function. Length = 287

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)

Query: 362 AAFKSLKYLHSA-RILHRDIKPGNLLVNS 389
           A  + L YL++  RI+HRDIKP N+LVNS
Sbjct: 111 AVVEGLTYLYNVHRIMHRDIKPSNILVNS 139

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|240254 PTZ00069, PTZ00069, 60S ribosomal protein L5; Provisional

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
            KK+KKK+KK   KK K KK   K+ K + K KK +  ++ +KK K
Sbjct: 255 VKKKKKKKKKVVHKKYKTKKLTGKQRKARVKAKKAQRRERLQKKIK 300

Length = 300

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 39.1 bits (92), Expect = 0.003
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + L ++H     HRD+KP NLLV+   ++K
Sbjct: 109 LQGLAHIHKHGFFHRDLKPENLLVSGPEVVK 139

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 15/31 (48%), Positives = 23/31 (74%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + L +LHS R++HRD+KP N+LV S+  +K
Sbjct: 120 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 13/30 (43%), Positives = 23/30 (76%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + +++ HS  I+HRDIKP N+LV+ + ++K
Sbjct: 111 RGIEFCHSHNIIHRDIKPENILVSQSGVVK 140

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1

 Score = 39.1 bits (92), Expect = 0.003
 Identities = 14/59 (23%), Positives = 32/59 (54%)

Query: 7   KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRR 65
           K    + +++E +       E+KK ++K++K EKK EK++ E+   +++ E   +  + 
Sbjct: 390 KPLLAEGEEEEGENGNLSPAERKKLRKKQRKAEKKAEKEEAEKAAAKKKAEAAAKKAKG 448

This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homologue of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle. Length = 516

>gnl|CDD|237753 PRK14552, PRK14552, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 15/65 (23%)

Query: 15  KKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRRRRRK 74
           K+E  K+ ++ KEK  K  KKK+EEKK +K+KK+               ++R+++ ++RK
Sbjct: 365 KEELNKRIEEIKEKYPKPPKKKREEKKPQKRKKK---------------KKRKKKGKKRK 409

Query: 75  KEREK 79
           K+  K
Sbjct: 410 KKGRK 414

Length = 414

>gnl|CDD|222636 pfam14265, DUF4355, Domain of unknown function (DUF4355)

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 14/76 (18%), Positives = 37/76 (48%)

Query: 8  KEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRR 67
          + ++++   +K+  +   KEK K ++K+++++ + EK  K   E + E E E+  +    
Sbjct: 1  EPEEEKTFTDKEVDKAIAKEKAKWEKKQEEKKSEAEKLAKMSAEEKAEYELEKLEKELEE 60

Query: 68 RRRRRRKKEREKKRSS 83
                ++E + +   
Sbjct: 61 LEAELARRELKAEAKK 76

This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 180 and 214 amino acids in length. Length = 125

>gnl|CDD|219868 pfam08496, Peptidase_S49_N, Peptidase family S49 N-terminal

 Score = 37.5 bits (88), Expect = 0.003
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKK-KEKKKK 47
          E+ K+ K+  +     +K+ K  +K EKK +K K K E+KK K+++ K
Sbjct: 49 EEYKDLKESLEAALLDKKELKAWEKAEKKAEKAKAKAEKKKAKKEEPK 96

This domain is found to the N-terminus of bacterial signal peptidases of the S49 family (pfam01343). Length = 154

>gnl|CDD|235322 PRK04950, PRK04950, ProP expression regulator; Provisional

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 8/51 (15%), Positives = 30/51 (58%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
           E++ +K++   +++K  +++++ K K  +KK++ + ++ + +     +  E
Sbjct: 116 EQQAKKREAAGEKEKAPRRERKPKPKAPRKKRKPRAQKPEPQHTPVSDISE 166

Length = 213

>gnl|CDD|223880 COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKE 43
           + K EKK +K K K K K K + K K + K K+   K   K  
Sbjct: 87  KPKPEKKPKKPKPKPKPKPKPKPKVKPQPKPKKPPSKTAAKAP 129

Length = 244

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 14/28 (50%), Positives = 22/28 (78%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
            +YLH+  I++RD+KP NLL++SN  +K
Sbjct: 106 FEYLHNRGIIYRDLKPENLLLDSNGYVK 133

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|217348 pfam03064, U79_P34, HSV U79 / HCMV P34

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 16/77 (20%), Positives = 40/77 (51%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K+  K+KEK++ +  +K K++++KK+++K++  + K           +     ++E  +E
Sbjct: 161 KRSGKQKEKRRVEDSQKHKEDRRKKQEEKRRNDEDKRPGGGGGSSGGQSGLSTKDEPPKE 220

Query: 62  GRRRRRRRRRRRKKERE 78
            R++     RR + +  
Sbjct: 221 KRQKHHDPERRLEPQSH 237

This family represents herpes virus protein U79 and cytomegalovirus early phosphoprotein P34 (UL112). Length = 238

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 39.7 bits (93), Expect = 0.003
 Identities = 16/82 (19%), Positives = 40/82 (48%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E ++ +++ ++ ++K E  K+E +++E   ++ ++   E ++ K++ EE+     EE EE
Sbjct: 317 ELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEE 376

Query: 61  EGRRRRRRRRRRRKKEREKKRS 82
                R        +  E +  
Sbjct: 377 LFEALREELAELEAELAEIRNE 398

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 39.7 bits (93), Expect = 0.003
 Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E K++ +  K++ +++E   +E ++   + ++ K++ EEK     ++ EE  E   E   
Sbjct: 327 ELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREELA 386

Query: 61  EGRRRRRR-RRRRRKKEREKKRSSRRK 86
           E        R    + +RE +    R 
Sbjct: 387 ELEAELAEIRNELEELKREIESLEERL 413

Length = 1163

>gnl|CDD|221937 pfam13148, DUF3987, Protein of unknown function (DUF3987)

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRR 64
           E+ +E+ +E+ KE + +++  + +KK  EKK K+  KK K ++   E   E E EE    
Sbjct: 68  EELREEYEEELKEYEAEKEIWEAEKKGLEKKAKKAIKKGKDEEALAEELLELEAEEPEPP 127

Query: 65  RRRR 68
            R R
Sbjct: 128 LRPR 131

A family of uncharacterized proteins found by clustering human gut metagenomic sequences. Length = 379

>gnl|CDD|222581 pfam14181, YqfQ, YqfQ-like protein

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 13/48 (27%), Positives = 30/48 (62%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKE 48
           E+ +E+  ++ +++   + K E K+K+K++  + K ++EK K + KK 
Sbjct: 99  EETEEESTDETEQEDPPETKTESKEKKKREVPKPKTEKEKPKTEPKKP 146

The YqfQ-like protein family includes the B. subtilis YqfQ protein, also known as VrrA, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 146 and 237 amino acids in length. There are two conserved sequence motifs: QYGP and PKLY. Length = 155

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 39.6 bits (93), Expect = 0.003
 Identities = 13/57 (22%), Positives = 23/57 (40%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
                K  +   E    KKK +   K    K   KKK + + +  KK E++   +++
Sbjct: 59  LSGMVKDTDDATESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKD 115

Length = 509

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 10/60 (16%), Positives = 27/60 (45%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K    K   KK+ K E    +K +K+    K+      K  +   + +++ +++++ + +
Sbjct: 84  KAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLD 143

Length = 509

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 17/93 (18%), Positives = 32/93 (34%)

Query: 4  KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
               + +   ++E KKK KK   K K K    KEE K+  + K++   + ++       
Sbjct: 2  TTASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSG 61

Query: 64 RRRRRRRRRRKKEREKKRSSRRKPFKLSEISAT 96
            +           +KK  +  K       +  
Sbjct: 62 MVKDTDDATESDIPKKKTKTAAKAAAAKAPAKK 94

Length = 509

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 14/60 (23%), Positives = 26/60 (43%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
            + +  K+K K   K    K   KK+ K + +  KK EKK    K ++    ++ +   +
Sbjct: 70  TESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQ 129

Length = 509

>gnl|CDD|236048 PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated

 Score = 39.4 bits (93), Expect = 0.003
 Identities = 9/36 (25%), Positives = 13/36 (36%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKK 37
           +       K    KK   K  +K K++    EK  K
Sbjct: 822 RYLADAPAKDPAGKKAAVKFSRKTKQQYVASEKDGK 857

Length = 859

>gnl|CDD|238356 cd00660, Topoisomer_IB_N, Topoisomer_IB_N: N-terminal DNA binding fragment found in eukaryotic DNA topoisomerase (topo) IB proteins similar to the monomeric yeast and human topo I and heterodimeric topo I from Leishmania donvanni

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKK---KEEKKKEKKKKEEEE 51
           +K   K+EK   KK  K       +  +++KEKKK   KEEKK  K++KE+ E
Sbjct: 68  RKILTKEEKHIIKKLSKCDFTPIYQYFEEEKEKKKAMSKEEKKAIKEEKEKLE 120

Topo I enzymes are divided into: topo type IA (bacterial) and type IB (eukaryotic). Topo I relaxes superhelical tension in duplex DNA by creating a single-strand nick, the broken strand can then rotate around the unbroken strand to remove DNA supercoils and, the nick is religated, liberating topo I. These enzymes regulate the topological changes that accompany DNA replication, transcription and other nuclear processes. Human topo I is the target of a diverse set of anticancer drugs including camptothecins (CPTs). CPTs bind to the topo I-DNA complex and inhibit re-ligation of the single-strand nick, resulting in the accumulation of topo I-DNA adducts. In addition to differences in structure and some biochemical properties, Trypanosomatid parasite topo I differ from human topo I in their sensitivity to CPTs and other classical topo I inhibitors. Trypanosomatid topos I play putative roles in organizing the kinetoplast DNA network unique to these parasites. This family may represent more than one structural domain. Length = 215

>gnl|CDD|217502 pfam03343, SART-1, SART-1 family

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 12/98 (12%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKE------------KKKKKEKKKKEEKKKEKKKKE 48
           ++ ++K++E KK+ K      +    E             K KK KKKK++KKK +K  +
Sbjct: 234 DEAEKKRQEVKKKLKINNVSLDDDSTETPASDYYDVSEMVKFKKPKKKKKKKKKRRKDLD 293

Query: 49  EEEGEEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRRK 86
           E+E E E EG        R+         E     R++
Sbjct: 294 EDELEPEAEGLGSSDSGSRKDVEEENARLEDSPKKRKE 331

SART-1 is a protein involved in cell cycle arrest and pre-mRNA splicing. It has been shown to be a component of U4/U6 x U5 tri-snRNP complex in human, Schizosaccharomyces pombe and Saccharomyces cerevisiae. SART-1 is a known tumour antigen in a range of cancers recognised by T cells. Length = 603

>gnl|CDD|227891 COG5604, COG5604, Uncharacterized conserved protein [Function unknown]

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 16/61 (26%), Positives = 26/61 (42%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
          +++K+  + KK    K +    + K E       K KE+  K     +    EEEE+G E
Sbjct: 21 DRRKQLARSKKVYGTKNRNSHTENKMESGTNDNNKNKEKLSKLYSDVDSSSSEEEEDGSE 80

Query: 61 E 61
           
Sbjct: 81 S 81

Length = 523

>gnl|CDD|218188 pfam04641, Rtf2, Replication termination factor 2

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 16/79 (20%), Positives = 33/79 (41%)

Query: 8   KEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRR 67
           +E+ +  K   +++  KKK+KKKKK+ KK        +         E           +
Sbjct: 166 EEEVELLKARLEEERAKKKKKKKKKKTKKNNATGSSAEATVSSAVPTELSSGAGQVGEAK 225

Query: 68  RRRRRRKKEREKKRSSRRK 86
           + +++R    + ++S   K
Sbjct: 226 KLKKKRSIAPDNEKSEVYK 244

It is vital for effective cell-replication that replication is not stalled at any point by, for instance, damaged bases. Rtf2 stabilizes the replication fork stalled at the site-specific replication barrier RTS1 by preventing replication restart until completion of DNA synthesis by a converging replication fork initiated at a flanking origin. The RTS1 element terminates replication forks that are moving in the cen2-distal direction while allowing forks moving in the cen2-proximal direction to pass through the region. Rtf2 contains a C2HC2 motif related to the C3HC4 RING-finger motif, and would appear to fold up, creating a RING finger-like structure but forming only one functional Zn2+ ion-binding site. Length = 254

>gnl|CDD|214922 smart00935, OmpH, Outer membrane protein (OmpH-like)

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 23/79 (29%), Positives = 51/79 (64%), Gaps = 3/79 (3%)

Query: 4  KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEE---KKKEKKKKEEEEGEEEEEGEE 60
          K  +K+ +KE KK + + EK +KE +K KEK +K+     +  ++KKE+E  ++ +E + 
Sbjct: 17 KAAQKQLEKEFKKRQAELEKLEKELQKLKEKLQKDAATLSEAAREKKEKELQKKVQEFQR 76

Query: 61 EGRRRRRRRRRRRKKEREK 79
          + ++ ++  ++R+++E +K
Sbjct: 77 KQQKLQQDLQKRQQEELQK 95

This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery. Length = 140

>gnl|CDD|219461 pfam07543, PGA2, Protein trafficking PGA2

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE-- 61
           K ++KE +KE+ + ++ +EKK K               +E    EE+E +          
Sbjct: 40  KAQEKEHEKERAEREEAREKKAKISPNALRGGATAGHGEEDTDDEEDEEDFATPSAVPQW 99

Query: 62  GRRRRRRRRRRRKKEREKKRSSRRKPFKLSE 92
           G++ R+R+R+  +K  E +   R   +   +
Sbjct: 100 GKKARKRQRKVIRKLLEAEEQLREDQYDDED 130

A Saccharomyces cerevisiae member of this family (PGA2) is an ER protein which has been implicated in protein trafficking. Length = 139

>gnl|CDD|237629 PRK14160, PRK14160, heat shock protein GrpE; Provisional

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 18/59 (30%), Positives = 34/59 (57%)

Query: 3  KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
          +KE K  K +  +++  K+ + K+E K K+E  + EE +KE+  ++ EE  E +  E +
Sbjct: 2  EKECKDAKHENMEEDCCKENENKEEDKGKEEDLEFEEIEKEEIIEDSEESNEVKIEELK 60

Length = 211

>gnl|CDD|224308 COG1390, NtpE, Archaeal/vacuolar-type H+-ATPase subunit E [Energy production and conversion]

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 21/77 (27%), Positives = 40/77 (51%)

Query: 1  EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
          EK  +K   + +E+ +E  ++ +++ EK K++ K++ EE  +E  +K E+E E E +   
Sbjct: 5  EKLIKKILREAEEEAEEILEEAREEAEKIKEEAKREAEEAIEEILRKAEKEAERERQRII 64

Query: 61 EGRRRRRRRRRRRKKER 77
                 RR+    KE 
Sbjct: 65 SSALLEARRKLLEAKEE 81

Length = 194

>gnl|CDD|215038 PLN00040, PLN00040, Protein MAK16 homolog; Provisional

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 10/94 (10%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKK----------KEEKKKEKKKKEEEE 51
            +K  K+E+++E K +K  + +K  EK+  +  K            +   K  + +E EE
Sbjct: 137 PRKLLKRERRRESKAQKAAQLEKSIEKELLERLKSGTYGDIYNFPSKSYNKVLEMEEVEE 196

Query: 52  GEEEEEGEEEGRRRRRRRRRRRKKEREKKRSSRR 85
            EEE    ++    +++ R   + E E +   + 
Sbjct: 197 AEEELPKSDKNPNSKKKSRVHVEIEYEDEIEYKS 230

Length = 233

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 13/24 (54%), Positives = 18/24 (75%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSN 390
           ++YLHS  I+HRDIK  N+L +S 
Sbjct: 117 VEYLHSNMIVHRDIKGANILRDSA 140

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional

 Score = 39.0 bits (92), Expect = 0.004
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKK----KKKEKKKKEEKKKEKKKKEEE--EGEE 54
           E K ++ +E+ K   +E KK+ +  K++     K++  K + E +KE +++  E  + E+
Sbjct: 30  EAKIKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEK 89

Query: 55  EEEGEEEGRRRRRRRRRRRKKEREKKRSS 83
               +EE   R+     +R++E EKK   
Sbjct: 90  RLLQKEENLDRKLELLEKREEELEKKEKE 118

Length = 520

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 17/30 (56%), Positives = 22/30 (73%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + L YLHS  ILHRD+K  NLLV+++ I K
Sbjct: 119 EGLAYLHSKGILHRDLKADNLLVDADGICK 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|222636 pfam14265, DUF4355, Domain of unknown function (DUF4355)

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 18/79 (22%), Positives = 37/79 (46%)

Query: 11 KKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRRRRRR 70
          + E++K    KE  K   K+K + +KK+E+KK + +K  +   EE+   E  +  +    
Sbjct: 1  EPEEEKTFTDKEVDKAIAKEKAKWEKKQEEKKSEAEKLAKMSAEEKAEYELEKLEKELEE 60

Query: 71 RRRKKEREKKRSSRRKPFK 89
             +  R + ++  +K   
Sbjct: 61 LEAELARRELKAEAKKMLS 79

This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 180 and 214 amino acids in length. Length = 125

>gnl|CDD|226894 COG4499, COG4499, Predicted membrane protein [Function unknown]

 Score = 39.0 bits (91), Expect = 0.004
 Identities = 16/65 (24%), Positives = 40/65 (61%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E  KE  K+ +   KK  + K++    ++ + + K+++ K++E +KK++E+ +E++E  +
Sbjct: 369 ELLKEYNKKLQDYTKKLGEVKDETDASEEAEAKAKEEKLKQEENEKKQKEQADEDKEKRQ 428

Query: 61  EGRRR 65
           +  R+
Sbjct: 429 KDERK 433

Length = 434

>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain

 Score = 39.2 bits (91), Expect = 0.004
 Identities = 22/83 (26%), Positives = 49/83 (59%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E++++ +K K +E+K+EK K ++++    +++ K++ E  ++E+   E+EE  +EEE EE
Sbjct: 779 EEEEKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEE 838

Query: 61  EGRRRRRRRRRRRKKEREKKRSS 83
                +  ++  +  E E +R  
Sbjct: 839 LALELKEEQKLEKLAEEELERLE 861

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162

>gnl|CDD|218177 pfam04615, Utp14, Utp14 protein

 Score = 39.3 bits (92), Expect = 0.004
 Identities = 21/80 (26%), Positives = 48/80 (60%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           ++++ ++  KK   +++   +  +K+ + KK +K+ K E K++K+  EEEE E+EEE + 
Sbjct: 408 DEEENEEPSKKNVGRRKFGPENGEKEAESKKLKKENKNEFKEKKESDEEEELEDEEEAKV 467

Query: 61  EGRRRRRRRRRRRKKEREKK 80
           E    +  +R  + ++ E++
Sbjct: 468 EKVANKLLKRSEKAQKEEEE 487

This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome. Length = 728

>gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           ++ K  +  ++++K   +   E    +KK ++ +  +   K E    E    +  E    
Sbjct: 197 QQAKLAQLLEERKKTLAQLNSELSADQKKLEELRANESRLKNEIASAEAAAAKAREAAA- 255

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKP 87
                     R R  E ++   + +  
Sbjct: 256 ---AAEAAAARARAAEAKRTGETYKPT 279

Length = 420

>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein

 Score = 39.0 bits (91), Expect = 0.004
 Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 7/59 (11%)

Query: 5  EKKKEKKKEKKKEKKKKEKKKKEKKKKK-------EKKKKEEKKKEKKKKEEEEGEEEE 56
          EK+ EK+   ++E+++KE+KK+E++K         E+++KEEKKK+ KK +E   E E 
Sbjct: 28 EKEVEKEVPDEEEEEEKEEKKEEEEKTTDKEEEVDEEEEKEEKKKKTKKVKETTTEWEL 86

Length = 529

>gnl|CDD|223880 COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKK 47
           + K++ K EKK +K K K K + K K K K + K KK   K   K  
Sbjct: 83  KPKEKPKPEKKPKKPKPKPKPKPKPKPKVKPQPKPKKPPSKTAAKAP 129

Length = 244

>gnl|CDD|223880 COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 17/56 (30%), Positives = 26/56 (46%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEE 56
           E   E    K KEK K +KK +K K + K K + K K + + + KK   +   +  
Sbjct: 74  ETPPEPTPPKPKEKPKPEKKPKKPKPKPKPKPKPKPKVKPQPKPKKPPSKTAAKAP 129

Length = 244

>gnl|CDD|220371 pfam09736, Bud13, Pre-mRNA-splicing factor of RES complex

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 15/76 (19%), Positives = 45/76 (59%)

Query: 3  KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
          K  +  + ++++++++++KE+K+++++K+KE  K   +K+E++K+ EE  + + +     
Sbjct: 7  KSGRIIDIEEKREEKEREKEEKERKEEKEKEWGKGLVQKEEREKRLEELEKAKNKPLARY 66

Query: 63 RRRRRRRRRRRKKERE 78
                    +++ER 
Sbjct: 67 ADDEDYDEELKEQERW 82

This entry is characterized by proteins with alternating conserved and low-complexity regions. Bud13 together with Snu17p and a newly identified factor, Pml1p/Ylr016c, form a novel trimeric complex. called The RES complex, pre-mRNA retention and splicing complex. Subunits of this complex are not essential for viability of yeasts but they are required for efficient splicing in vitro and in vivo. Furthermore, inactivation of this complex causes pre-mRNA leakage from the nucleus. Bud13 contains a unique, phylogenetically conserved C-terminal region of unknown function. Length = 141

>gnl|CDD|217756 pfam03839, Sec62, Translocation protein Sec62

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 6  KKKEKKKEKKKEKKKKEKKKKEKKKK-KEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRR 64
          K+  +  E +K K  K+K   E   K   + K  EK K   K +  E  ++   +E+   
Sbjct: 10 KRVVRALESEKYKANKDKGNPEIYNKINSQDKAIEKFKLLIKAQMAERVKKLHSQEKKEE 69

Query: 65 RRRRRRR 71
          +++ +++
Sbjct: 70 KKKPKKK 76

Length = 217

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 8/92 (8%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEE----- 55
           EK+ ++ +E K+E ++ +K+ E  +  K+K +EK ++ E++ E+ KKE EE EE+     
Sbjct: 227 EKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK 286

Query: 56  --EEGEEEGRRRRRRRRRRRKKERE-KKRSSR 84
             +E  EE  +          + RE +KR SR
Sbjct: 287 ELKEKAEEYIKLSEFYEEYLDELREIEKRLSR 318

Length = 880

>gnl|CDD|219913 pfam08576, DUF1764, Eukaryotic protein of unknown function (DUF1764)

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 1  EKKKEKKKEKKK------EKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEE 54
          E+KK +K +K+         KK KKKK++  K  + K  KK +++ KK+ +  E  E  +
Sbjct: 2  EEKKNEKTDKRDIDDIFSNIKKRKKKKKRTAKTARPKATKKGQKKDKKKDEFPEFPEESK 61

Query: 55 EEEGEE 60
              E+
Sbjct: 62 RRRTED 67

This is a family of eukaryotic proteins of unknown function. This family contains many hypothetical proteins. Length = 98

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 39.3 bits (92), Expect = 0.004
 Identities = 20/99 (20%), Positives = 41/99 (41%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            K++ +++E   E+ ++   + ++ KE+ ++K     EE ++  +   EE  E E E  E
Sbjct: 335 LKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAELEAELAE 394

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEISATRPD 99
                   +R     E   +R S R      E+     +
Sbjct: 395 IRNELEELKREIESLEERLERLSERLEDLKEELKELEAE 433

Length = 1163

>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 18/86 (20%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKE-EKKKEKKKKEEEEGEEEEEGEE 60
           ++ EK+ E+ K + +E +++ ++ +E+  + +++ +E E +    ++  EE E E E  E
Sbjct: 263 EEAEKEIEELKSELEELREELEELQEELLELKEEIEELEGEISLLRERLEELENELEELE 322

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRK 86
           E     + +    K+E E++ +   +
Sbjct: 323 ERLEELKEKIEALKEELEERETLLEE 348

Length = 1163

>gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 12/60 (20%), Positives = 26/60 (43%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +   +  +    +KK +   K    K   KKK K + +  KK +KK   ++ ++    ++
Sbjct: 64  KDTDDATESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKD 123

Length = 509

>gnl|CDD|221028 pfam11208, DUF2992, Protein of unknown function (DUF2992)

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 15/34 (44%), Positives = 26/34 (76%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEK 34
             K+EKKK  K++K++EK++K + K++KKK K +
Sbjct: 97  RNKQEKKKRSKEKKEEEKERKRQLKQQKKKAKHR 130

This bacterial family of proteins has no known function. However, the cis-regulatory yjdF motif, just upstream from the gene encoding the proteins for this family, is a small non-coding RNA, Rfam:RF01764. The yjdF motif is found in many Firmicutes, including Bacillus subtilis. In most cases, it resides in potential 5' UTRs of homologues of the yjdF gene whose function is unknown. However, in Streptococcus thermophilus, a yjdF RNA motif is associated with an operon whose protein products synthesise nicotinamide adenine dinucleotide (NAD+). Also, the S. thermophilus yjdF RNA lacks typical yjdF motif consensus features downstream of and including the P4 stem. Thus, if yjdF RNAs are riboswitch aptamers, the S. thermophilus RNAs might sense a distinct compound that structurally resembles the ligand bound by other yjdF RNAs. On the ohter hand, perhaps these RNAs have an alternative solution forming a similar binding site, as is observed with some SAM riboswitches. Length = 132

>gnl|CDD|222665 pfam14303, NAM-associated, No apical meristem-associated C-terminal domain

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 18/56 (32%), Positives = 36/56 (64%)

Query: 6   KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           K KEK +  K + KK+E +K+++K+++  K   E +KE+ + E+++ E +   EE+
Sbjct: 67  KAKEKLRRDKLKAKKEEAEKEKEKEERFMKALAEAEKERAELEKKKAEAKLMKEEK 122

This domain is found in a number of different types of plant proteins including NAM-like proteins. Length = 147

>gnl|CDD|236048 PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated

 Score = 39.0 bits (92), Expect = 0.004
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEK 44
            +K EK +       K+   K+   K  +K K++    EK  + 
Sbjct: 815 AEKPEKLRYLADAPAKDPAGKKAAVKFSRKTKQQYVASEKDGKA 858

Length = 859

>gnl|CDD|222977 PHA03089, PHA03089, late transcription factor VLTF-4; Provisional

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 6  KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEE 57
          +   KK  KKK+   ++KK  +K KKK+K+K+E  +   ++  + E  EE +
Sbjct: 44 EIPSKKTSKKKKTTPRKKKTTKKTKKKKKEKEEVPELAAEELSDSEENEEND 95

Length = 191

>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 14/58 (24%), Positives = 23/58 (39%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           +KK E + +KK   + K+K   E K    K   E K   +K    +  E+    +   
Sbjct: 200 KKKAEAEAKKKAAAEAKKKAAAEAKAAAAKAAAEAKAAAEKAAAAKAAEKAAAAKAAA 257

Length = 387

>gnl|CDD|219901 pfam08555, DUF1754, Eukaryotic family of unknown function (DUF1754)

 Score = 35.9 bits (83), Expect = 0.004
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 4  KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
          K K K+   +KKK KKKK+K K +++   EK+++E+   E   KE EE E+ E+ E+E  
Sbjct: 11 KLKGKKIDVKKKK-KKKKKKNKSKEEVVTEKEEEEKSSAESDLKEGEEDEDNEKIEQEED 69

Query: 64 RRRRRRRRRRKKEREKKR 81
                  R  +E ++KR
Sbjct: 70 GMNLTEAERAFEEAQRKR 87

This is a eukaryotic protein family of unknown function. Length = 90

>gnl|CDD|214395 CHL00204, ycf1, Ycf1; Provisional

 Score = 39.3 bits (92), Expect = 0.004
 Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 1   EKKKEKK-KEKKKEKKKEKKKKEKKKKEKKKKKEKKKKE 38
            K  E K  +  +EK K+KKKKEKKK+E+ K++EK + E
Sbjct: 730 GKDAEFKISDSVEEKTKKKKKKEKKKEEEYKREEKARIE 768

Length = 1832

>gnl|CDD|214395 CHL00204, ycf1, Ycf1; Provisional

 Score = 39.3 bits (92), Expect = 0.004
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKE 43
            K  E K     E+K K+KKKKEKKK++E K++E+ + E
Sbjct: 730 GKDAEFKISDSVEEKTKKKKKKEKKKEEEYKREEKARIE 768

Length = 1832

>gnl|CDD|227519 COG5192, BMS1, GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]

 Score = 39.3 bits (91), Expect = 0.004
 Identities = 17/68 (25%), Positives = 42/68 (61%), Gaps = 4/68 (5%)

Query: 3    KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
            K E K    KE+ K++++KE+ +  ++ K+E+  K+EK++E++ ++       +  +E  
Sbjct: 1014 KHEIKDRIVKERIKDQEEKERMESLQRAKEEEIGKKEKEREQRIRKTIH----DNYKEMA 1069

Query: 63   RRRRRRRR 70
            ++R +++R
Sbjct: 1070 KKRLKKKR 1077

Length = 1077

>gnl|CDD|239286 cd02988, Phd_like_VIAF, Phosducin (Phd)-like family, Viral inhibitor of apoptosis (IAP)-associated factor (VIAF) subfamily; VIAF is a Phd-like protein that functions in caspase activation during apoptosis

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 13 EKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRRR 66
           K    K++E++  E   ++  +   EKK   +  EE + EE++   EE RR+R
Sbjct: 15 PKPPSPKEEEEEALELAIQEAHENALEKKLLDELDEELDEEEDDRFLEEYRRKR 68

It was identified as an IAP binding protein through a screen of a human B-cell library using a prototype IAP. VIAF lacks a consensus IAP binding motif and while it does not function as an IAP antagonist, it still plays a regulatory role in the complete activation of caspases. VIAF itself is a substrate for IAP-mediated ubiquitination, suggesting that it may be a target of IAPs in the prevention of cell death. The similarity of VIAF to Phd points to a potential role distinct from apoptosis regulation. Phd functions as a cytosolic regulator of G protein by specifically binding to G protein betagamma (Gbg)-subunits. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain. Length = 192

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSN 390
             K L YLH    +HRDIK  N+L+  +
Sbjct: 110 TLKGLAYLHETGKIHRDIKGANILLTED 137

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 361 SAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
             A + L YLHS   +HRDIK GN+L+     +K
Sbjct: 122 HGALQGLAYLHSHERIHRDIKAGNILLTEPGTVK 155

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 33/150 (22%)

Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           K+ DFG  A++ +  P +     V T Y+ APE++     Y   VD+WS+G +  E++  
Sbjct: 157 KLSDFGFCAQISKDVPKRKSL--VGTPYWMAPEVI-SRTPYGTEVDIWSLGIMVIEMVDG 213

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
              + + SPVQ +  + D   +P P                + + +  +S +        
Sbjct: 214 EPPYFSDSPVQAMKRLRD---SPPP----------------KLKNAHKISPVLR------ 248

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                 L +ML  +P +R +    L HP+L
Sbjct: 249 ----DFLERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|215521 PLN02967, PLN02967, kinase

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 15/89 (16%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKK-----------KEKKKKEEKKKEKKKKEE 49
           E     KK+  +  K+  KK   +  E  ++            +K+ K+  ++ ++K   
Sbjct: 64  ENGAVSKKKPTRSVKRATKKTVVEISEPLEEGSELVVNEDAALDKESKKTPRRTRRKAAA 123

Query: 50  EEGEEEEEGEEEGRRRRRRRRRRRKKERE 78
              + EEE  E+    + R+RR+ KK  E
Sbjct: 124 ASSDVEEEKTEK----KVRKRRKVKKMDE 148

Length = 581

>gnl|CDD|219256 pfam06991, Prp19_bind, Splicing factor, Prp19-binding domain

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 26/97 (26%), Positives = 56/97 (57%), Gaps = 4/97 (4%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGE----EEE 56
           E+++E  KEK  E++ ++K +E+K++  K  +E+ KKE + K++    E   +    ++E
Sbjct: 52  EREREAAKEKALEEEAKRKAEERKRETLKIVEEEVKKELELKKRNTLLEANIDDVDTDDE 111

Query: 57  EGEEEGRRRRRRRRRRRKKEREKKRSSRRKPFKLSEI 93
             EEE    + R  +R K++RE++    R+  ++ ++
Sbjct: 112 NEEEEYEAWKLRELKRIKRDREEREEMEREKAEIEKM 148

This family represents the C-terminus (approximately 300 residues) of proteins that are involved as binding partners for Prp19 as part of the nuclear pore complex. The family in Drosophila is necessary for pre-mRNA splicing, and the human protein has been found in purifications of the spliceosome. In the past this family was thought, erroneously, to be associated with microfibrillin. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ D G+ARV E   + A T  + T YY +PE L   + Y+   DVW++GC   E+   +
Sbjct: 142 KVGDLGIARVLENQCDMASTL-IGTPYYMSPE-LFSNKPYNYKSDVWALGCCVYEMATLK 199

Query: 184 ILFQAQ 189
             F A+
Sbjct: 200 HAFNAK 205

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 11/24 (45%), Positives = 20/24 (83%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLV 387
            ++L +LHS +++HRD+K GN+L+
Sbjct: 113 LEALNFLHSHKVIHRDLKAGNILL 136

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173965 cd08045, TAF4, TATA Binding Protein (TBP) Associated Factor 4 (TAF4) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 13/45 (28%), Positives = 34/45 (75%)

Query: 7   KKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEE 51
           + E+++E+K++++++E+  +  K + E+ + ++K KE +K+E+EE
Sbjct: 121 QLEREEEEKRDEEERERLLRAAKSRSEQSRLKQKAKEMQKEEDEE 165

The TATA Binding Protein (TBP) Associated Factor 4 (TAF4) is one of several TAFs that bind TBP and are involved in forming the Transcription Factor IID (TFIID) complex. TFIID is one of seven General Transcription Factors (GTF) (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, and TFIID) that are involved in accurate initiation of transcription by RNA polymerase II in eukaryote. TFIID plays an important role in the recognition of promoter DNA and assembly of the pre-initiation complex. TFIID complex is composed of the TBP and at least 13 TAFs. TAFs from various species were originally named by their predicted molecular weight or their electrophoretic mobility in polyacrylamide gels. A new, unified nomenclature for the pol II TAFs has been suggested to show the relationship between TAF orthologs and paralogs. Several hypotheses are proposed for TAFs functions such as serving as activator-binding sites, core-promoter recognition or a role in essential catalytic activity. Each TAF, with the help of a specific activator, is required only for the expression of subset of genes and is not universally involved for transcription as are GTFs. In yeast and human cells, TAFs have been found as components of other complexes besides TFIID. Several TAFs interact via histone-fold (HFD) motifs; HFD is the interaction motif involved in heterodimerization of the core histones and their assembly into nucleosome octamers. The minimal HFD contains three alpha-helices linked by two loops and is found in core histones, TAFS and many other transcription factors. TFIID has a histone octamer-like substructure. TAF4 domain interacts with TAF12 and makes a novel histone-like heterodimer that binds DNA and has a core promoter function of a subset of genes. Length = 212

>gnl|CDD|218482 pfam05178, Kri1, KRI1-like family

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 14/53 (26%), Positives = 32/53 (60%)

Query: 4  KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEE 56
          KE+K+E+K ++++E K+ +  K+E+ ++K +K K+          EE+  + +
Sbjct: 1  KERKEEEKAQREEELKRLKNLKREEIEEKLEKIKKVAGLRGADLSEEDLADGD 53

The yeast member of this family (Kri1p) is found to be required for 40S ribosome biogenesis in the nucleolus. Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	395
KOG0660|consensus	359		100.0
KOG0664|consensus	449		100.0
KOG0659|consensus	318		100.0
KOG0661|consensus	538		100.0
KOG0593|consensus	396		100.0
KOG0663|consensus	419		100.0
KOG0600|consensus	560		100.0
KOG0658|consensus	364		100.0
KOG0594|consensus	323		100.0
KOG0667|consensus	586		100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG0665|consensus	369		100.0
KOG0592|consensus	604		100.0
KOG0575|consensus	592		100.0
KOG0666|consensus	438		100.0
KOG0598|consensus	357		100.0
KOG0615|consensus	475		100.0
KOG0581|consensus	364		100.0
KOG0033|consensus	355		100.0
KOG0616|consensus	355		100.0
KOG0671|consensus	415		100.0
KOG1290|consensus	590		100.0
KOG0588|consensus	786		100.0
KOG0662|consensus	292		100.0
KOG0605|consensus	550		100.0
KOG0599|consensus	411		100.0
KOG0694|consensus	694		100.0
KOG0669|consensus	376		100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0578|consensus	550		100.0
KOG0583|consensus	370		100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0198|consensus	313		100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
KOG0614|consensus	732		100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
KOG0597|consensus	808		100.0
KOG0610|consensus	459		100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG0604|consensus	400		100.0
KOG0690|consensus	516		100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG0591|consensus	375		100.0
KOG0585|consensus	576		100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0670|consensus	752		100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0986|consensus	591		100.0
KOG0612|consensus	1317		100.0
KOG0032|consensus	382		100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.98
KOG4717|consensus	864		99.98
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.98
KOG0668|consensus	338		99.98
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.98
KOG0582|consensus	516		99.98
KOG0603|consensus	612		99.98
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.98
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.98
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.98
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.98
KOG0580|consensus	281		99.98
KOG0595|consensus	429		99.98
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.98
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.98
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
KOG0201|consensus	467		99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
KOG4279|consensus	1226		99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
KOG0611|consensus	668		99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
KOG0696|consensus	683		99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
PHA03211	461	serine/threonine kinase US3; Provisional	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.97
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
KOG0589|consensus	426		99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.97
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.97
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.97
KOG0579|consensus	1187		99.97
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.97
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.97
PTZ00283	496	serine/threonine protein kinase; Provisional	99.97
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.97
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
KOG0596|consensus	677		99.96
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.96
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
KOG0695|consensus	593		99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.96
KOG0983|consensus	391		99.96
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.96
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.96
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.96
PLN00009	294	cyclin-dependent kinase A; Provisional	99.96
KOG0192|consensus	362		99.96
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.96
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.96
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.96
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
KOG0603|consensus	612		99.96
KOG0607|consensus	463		99.96
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.96
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.96
KOG0608|consensus	1034		99.96
KOG0577|consensus	948		99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.96
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.96
KOG0574|consensus	502		99.96
KOG4645|consensus	1509		99.96
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.95
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.95
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.95
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.95
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
KOG4236|consensus	888		99.95
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.95
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.95
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.95
PHA02988	283	hypothetical protein; Provisional	99.95
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.95
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.95
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.95
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.95
PLN00181	793	protein SPA1-RELATED; Provisional	99.95
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.95
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.95
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.95
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.95
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.95
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.95
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.95
KOG4721|consensus	904		99.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.95
KOG0584|consensus	632		99.94
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.94
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.94
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.94
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.94
KOG1035|consensus	1351		99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.94
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.94
KOG0197|consensus	468		99.94
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.94
KOG0586|consensus	596		99.94
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.94
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.94
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.94
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.94
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.94
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.94
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.94
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.94
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.94
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.94
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.94
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.94
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.94
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.94
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.94
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.94
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.94
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.94
KOG2345|consensus	302		99.94
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.94
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.94
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.94
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.94
KOG0193|consensus	678		99.94
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.94
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.94
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.94
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.94
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.94
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.94
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.94
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.94
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.94
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.94
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.94
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.94
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.94
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.94
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.94
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.94
KOG1167|consensus	418		99.94
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.94
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.94
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.94
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.94
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.94
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.94
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.94
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.94
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.94
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.94
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.93
KOG1989|consensus	738		99.93
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.93
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.93
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.93
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.93
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.93
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.93
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.93
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.93
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.93
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.93
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.93
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.93
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.93
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.93
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.93
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.93
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.93
KOG1027|consensus	903		99.93
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.93
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.93
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.93
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.93
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.93
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.93
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.93
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.93
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.93
KOG1006|consensus	361		99.93
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.93
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.93
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.93
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.93
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.93
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.92
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.92
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.92
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.92
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.92
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.92
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.92
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.92
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.92
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.92
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.92
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.92
KOG1151|consensus	775		99.92
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.92
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.92
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.92
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.92
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.92
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.92
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.91
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.91
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.91
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.91
KOG0984|consensus	282		99.91
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.9
KOG0587|consensus	953		99.9
KOG1026|consensus	774		99.89
KOG4250|consensus	732		99.88
KOG0196|consensus	996		99.88
KOG4257|consensus	974		99.88
KOG1095|consensus	1025		99.88
KOG1187|consensus	361		99.87
KOG0590|consensus	601		99.87
KOG0194|consensus	474		99.86
KOG0590|consensus	601		99.86
KOG0606|consensus	1205		99.85
KOG4278|consensus	1157		99.85
KOG3653|consensus	534		99.85
KOG0199|consensus	1039		99.84
KOG0200|consensus	609		99.84
KOG1094|consensus	807		99.84
KOG0576|consensus	829		99.83
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.81
KOG1024|consensus	563		99.8
KOG1152|consensus	772		99.79
KOG1345|consensus	378		99.79
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.76
KOG1025|consensus	1177		99.75
KOG1033|consensus	516		99.73
KOG2052|consensus	513		99.72
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.7
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.69
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.64
KOG1240|consensus	1431		99.62
KOG4158|consensus	598		99.62
KOG1164|consensus	322		99.58
PRK12274	218	serine/threonine protein kinase; Provisional	99.39
KOG1023|consensus	484		99.35
KOG0606|consensus	1205		99.35
PRK09188	365	serine/threonine protein kinase; Provisional	99.33
KOG1163|consensus	341		99.32
KOG1165|consensus	449		99.3
KOG0601|consensus	524		99.28
KOG0195|consensus	448		99.2
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.19
KOG2137|consensus	700		99.17
KOG1035|consensus	1351		99.1
KOG1166|consensus	974		99.06
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.04
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.01
KOG0594|consensus	323		98.84
KOG0600|consensus	560		98.79
KOG0592|consensus	604		98.78
KOG0658|consensus	364		98.74
KOG0661|consensus	538		98.72
smart00090	237	RIO RIO-like kinase.	98.71
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.7
KOG0593|consensus	396		98.69
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.66
KOG0664|consensus	449		98.64
KOG0660|consensus	359		98.64
KOG1266|consensus	458		98.63
KOG0585|consensus	576		98.61
KOG0659|consensus	318		98.6
PRK10345	210	hypothetical protein; Provisional	98.59
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.55
KOG0601|consensus	524		98.55
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.55
KOG0663|consensus	419		98.54
KOG0198|consensus	313		98.52
KOG0598|consensus	357		98.52
KOG0581|consensus	364		98.52
PRK14879	211	serine/threonine protein kinase; Provisional	98.51
KOG0616|consensus	355		98.49
KOG0662|consensus	292		98.47
KOG0615|consensus	475		98.47
KOG0583|consensus	370		98.38
KOG0599|consensus	411		98.36
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.34
KOG0665|consensus	369		98.34
KOG0610|consensus	459		98.31
KOG0575|consensus	592		98.28
KOG0666|consensus	438		98.24
KOG0580|consensus	281		98.22
COG4248	637	Uncharacterized protein with protein kinase and he	98.22
KOG0614|consensus	732		98.18
KOG0192|consensus	362		98.18
KOG0193|consensus	678		98.17
KOG0582|consensus	516		98.16
KOG0591|consensus	375		98.16
KOG0668|consensus	338		98.13
KOG0605|consensus	550		98.11
KOG0595|consensus	429		98.11
KOG0986|consensus	591		98.09
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.09
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.09
KOG0588|consensus	786		98.08
KOG0033|consensus	355		98.08
PHA02882	294	putative serine/threonine kinase; Provisional	98.07
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.07
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.06
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.06
KOG0611|consensus	668		98.05
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.05
PHA03212	391	serine/threonine kinase US3; Provisional	98.04
KOG0608|consensus	1034		98.03
KOG0984|consensus	282		98.03
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.03
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.02
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.01
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	97.99
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	97.99
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	97.98
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	97.98
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	97.98
PLN00181	793	protein SPA1-RELATED; Provisional	97.98
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	97.97
PHA03210	501	serine/threonine kinase US3; Provisional	97.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	97.97

>KOG0660|consensus

Probab=100.00  E-value=2.4e-51  Score=366.26  Aligned_cols=233  Identities=33%  Similarity=0.522  Sum_probs=198.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-CCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-PNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..|+++.+.+.+.||+.||.|+|+.+|+||||||+|+|++.+|.+||||||+||..... ....+|.++.|+||||||++
T Consensus       120 ~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPEll  199 (359)
T KOG0660|consen  120 QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELL  199 (359)
T ss_pred             ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHH
Confidence            34999999999999999999999999999999999999999999999999999987532 23467999999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhh-hhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHAC-DGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +....|+.++||||+|||++||++|+++|+|.+..+|+..|++++|+|+++.+..+. ..++.++...+..+  ...+..
T Consensus       200 l~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p--~~~f~~  277 (359)
T KOG0660|consen  200 LNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIP--KQPFSS  277 (359)
T ss_pred             hccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCC--CCCHHH
Confidence            988889999999999999999999999999999999999999999999999998885 44444443333322  223445


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEP  316 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (395)
                      ..++.++.+.|||.+||.+||.+|+||+|||+||||..    ++                              .+.++|
T Consensus       278 ~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~----~h------------------------------dp~dEP  323 (359)
T KOG0660|consen  278 IFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP----YH------------------------------DPEDEP  323 (359)
T ss_pred             HcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh----hc------------------------------CCccCC
Confidence            66799999999999999999999999999999999975    22                              357788


Q ss_pred             CCCCCCCchhHHhhhhhhHHhhHHHHHHHhhhc
Q psy2865         317 SAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLN  349 (395)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~l~~~i~~~I~~~~~  349 (395)
                      +++..+.. ++.. .+...|++.++.++..+..
T Consensus       324 ~~~~~~~~-~~~~-~~~~~~r~~i~~e~~~~~~  354 (359)
T KOG0660|consen  324 VCQPIFDS-FEHE-LTEEELRELIYKEILDFHP  354 (359)
T ss_pred             CCCCCCcc-cccc-ccHHHHHHHHHHHHHhhCc
Confidence            77766655 4444 7789999999999888764

>KOG0664|consensus

Probab=100.00  E-value=3.2e-50  Score=345.44  Aligned_cols=273  Identities=48%  Similarity=0.817  Sum_probs=245.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++.+.+.-++.||+.||.|||+.+|.||||||.|+|+++|+.+||||||+|+....+...++|..+.|.+|||||+++
T Consensus       151 Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLM  230 (449)
T KOG0664|consen  151 QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLM  230 (449)
T ss_pred             CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhh
Confidence            35778888999999999999999999999999999999999999999999999988777778899999999999999999


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      |.++|+.++||||+|||+.||+.++.+|+..++.+|+..|.+++|+|+.+.++..|+++...+++...+...+..+|.+.
T Consensus       231 GaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtls  310 (449)
T KOG0664|consen  231 GARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIA  310 (449)
T ss_pred             cchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999888888888887


Q ss_pred             C--CCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCC
Q psy2865         239 S--QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEP  316 (395)
Q Consensus       239 ~--~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (395)
                      .  ....++.+++..||.+||++|++.++++.|+|+..++.++++|+|.||++++.            ...+.+..+.+|
T Consensus       311 S~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r~~sCmC~~~~tt~~------------~~~r~f~~~~~P  378 (449)
T KOG0664|consen  311 SPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRFHSCMCSCCYTKPN------------MPSRLFAQDLDP  378 (449)
T ss_pred             CCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccceeeeeeeEeeeccCCC------------cchhhhccccCc
Confidence            6  45667889999999999999999999999999999999999999999998653            224567778889


Q ss_pred             CCCCCCCchhHHhhh--hhhHHhhHHHHHHHhhhcCCCCCcccCcchhh
Q psy2865         317 SAPQPFDDTWERKLT--SVQQVKEEMHKFIAEQLNTSRVPLCINPQSAA  363 (395)
Q Consensus       317 ~~~~~~~~~~~~~~~--~~~~l~~~i~~~I~~~~~~~~~p~~~~~~~qi  363 (395)
                      ....+|+..++....  ++..+++.+++.+.+.......+.++|...-.
T Consensus       379 ~~~~pFd~~~e~~~~~~s~~~~~~~~~q~~~~~p~~~~~~l~i~~q~aa  427 (449)
T KOG0664|consen  379 RHESPFDPKWEKDMSRLSMFELREKMYQFVMDRPALYGVALCINPQSAA  427 (449)
T ss_pred             ccCCCcChhHHHHHhHHHHHHHHHHHHHHHhccchhcCcccccCchhhh
Confidence            999999988777654  77788888888888877666777777655433

>KOG0659|consensus

Probab=100.00  E-value=3.8e-48  Score=331.47  Aligned_cols=209  Identities=35%  Similarity=0.539  Sum_probs=180.9

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      .+..-|+...++.|+-+++.|++|||...|+||||||.|+|++++|.+||+|||+|+.+... +...+..+.|+||||||
T Consensus        93 d~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p-~~~~~~~V~TRWYRAPE  171 (318)
T KOG0659|consen   93 DKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP-NRIQTHQVVTRWYRAPE  171 (318)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCC-CcccccceeeeeccChH
Confidence            34556788889999999999999999999999999999999999999999999999987653 44556669999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.|+..|+..+||||+|||++||+.|.|+|+|.++.+|+..|...+|+|.++.|+.+.....+......+..    .+.
T Consensus       172 LLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~----~~~  247 (318)
T KOG0659|consen  172 LLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKP----PLN  247 (318)
T ss_pred             HhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCC----ccc
Confidence            9999999999999999999999999999999999999999999999999999999998766655554432222    122


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGG  304 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (395)
                      .+++.++.++.|||.+||.+||.+|+||.|+|.|+||..               .|.|+.+..+++|.+
T Consensus       248 ~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~---------------~P~pt~~~~lp~p~~  301 (318)
T KOG0659|consen  248 NLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS---------------LPLPTPPSKLPIPST  301 (318)
T ss_pred             cccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc---------------CCCCCChhhCcCCcc
Confidence            366788889999999999999999999999999999975               466666666666665

>KOG0661|consensus

Probab=100.00  E-value=3e-47  Score=349.49  Aligned_cols=197  Identities=32%  Similarity=0.495  Sum_probs=172.6

Q ss_pred             HHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          75 KEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        75 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      +.|.+.|++..++.|+.||++||+|+|.+|+.|||+||+|||+..+..|||+|||+||....  ....|.||.|+|||||
T Consensus       101 K~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S--kpPYTeYVSTRWYRAP  178 (538)
T KOG0661|consen  101 KDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS--KPPYTEYVSTRWYRAP  178 (538)
T ss_pred             hhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc--CCCcchhhhcccccch
Confidence            34578999999999999999999999999999999999999999999999999999998653  3568999999999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |+++....|+.++|||++|||++|+++-+++|+|.++.||+.+|++++|+|....|......+.....+.+.-.  ...+
T Consensus       179 EvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~--~~~l  256 (538)
T KOG0661|consen  179 EVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVK--PSPL  256 (538)
T ss_pred             HHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCC--CCCh
Confidence            99999889999999999999999999999999999999999999999999999999876444433333322221  1233


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..+.+..+.++.+||.+||.|||.+||||.|+|+||||+.+
T Consensus       257 ~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  257 KDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             HHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence            44556799999999999999999999999999999999864

>KOG0593|consensus

Probab=100.00  E-value=9.4e-46  Score=322.08  Aligned_cols=194  Identities=29%  Similarity=0.462  Sum_probs=167.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..++.|+.|++.|+.|+|++++|||||||+||||+.+|.+||||||+|+.+.. +....|.|+.|+||||||++.
T Consensus        96 ~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPELLv  174 (396)
T KOG0593|consen   96 NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPELLV  174 (396)
T ss_pred             CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-CcchhhhhhhhhhccChhhhc
Confidence            4456677788999999999999999999999999999999999999999999998765 456789999999999999999


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      |...|+.++|||++||+++||++|.++|+|.++.+|+..|...+|...+..+.-+..+....-.+ .+....+..+....
T Consensus       175 GDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~-lP~~~~~epLe~k~  253 (396)
T KOG0593|consen  175 GDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR-LPEPEHPEPLERKY  253 (396)
T ss_pred             ccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee-cCCCCCccchhhhc
Confidence            97779999999999999999999999999999999999999999999887766554333222222 12233344555566


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +..+..+.||+..||.+||.+|++.+|+|.||||++
T Consensus       254 p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  254 PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             ccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            788889999999999999999999999999999965

>KOG0663|consensus

Probab=100.00  E-value=3.4e-45  Score=322.53  Aligned_cols=195  Identities=32%  Similarity=0.453  Sum_probs=168.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...|+...++..+.|++.|+.|||.+.|+|||||++|+|++..|.+||+|||+||.+..+ ...+|..+.|.||||||++
T Consensus       171 ~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k~~T~lVVTLWYRaPELL  249 (419)
T KOG0663|consen  171 KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LKPYTPLVVTLWYRAPELL  249 (419)
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-cccCcceEEEeeecCHHHh
Confidence            468899999999999999999999999999999999999999999999999999988653 4568889999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc-cCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR-KSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  236 (395)
                      +|...|++++||||+|||++||+++.|+|+|.+..+|+.+|..++|+|+...|+.+...........+. ....++..+.
T Consensus       250 LG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~  329 (419)
T KOG0663|consen  250 LGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFG  329 (419)
T ss_pred             cCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhcc
Confidence            999999999999999999999999999999999999999999999999999998875544322221111 1222333232


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ... .+....|||..+|.+||.+|+||+++|.|.||..
T Consensus       330 ~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e  366 (419)
T KOG0663|consen  330 ALS-LSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE  366 (419)
T ss_pred             ccc-cchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence            222 6689999999999999999999999999999987

>KOG0600|consensus

Probab=100.00  E-value=4.9e-45  Score=337.26  Aligned_cols=194  Identities=30%  Similarity=0.436  Sum_probs=168.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .-.|++.+++.|+.||+.||.|||.+||+|||||.+|||||.+|.+||+|||||+.+.......+|..|.|+||||||+|
T Consensus       212 ~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELL  291 (560)
T KOG0600|consen  212 GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELL  291 (560)
T ss_pred             CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHh
Confidence            34789999999999999999999999999999999999999999999999999998877666678999999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +|...|+.++|+||+||||.||++|+++|+|.++++|+..|.+++|.|..+.|+ ..........+....  ..+.+.+.
T Consensus       292 LG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kLP~~~~~kp~~~--y~r~l~E~  368 (560)
T KOG0600|consen  292 LGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKLPHATIFKPQQP--YKRRLRET  368 (560)
T ss_pred             cCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccCCcccccCCCCc--ccchHHHH
Confidence            999999999999999999999999999999999999999999999999999998 322221111111111  11233344


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+++.+.+|+..||.+||.+|.||.++|+|+||..
T Consensus       369 ~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  369 FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             hccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence            6778899999999999999999999999999999954

>KOG0658|consensus

Probab=100.00  E-value=1.9e-44  Score=322.62  Aligned_cols=194  Identities=30%  Similarity=0.486  Sum_probs=167.2

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-CCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      .+..++.-.++.|..||..|++|||..||+||||||+|||+|.+ |.+||||||.|+.+..  +....+|++|++|||||
T Consensus       118 ~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~--~epniSYicSRyYRaPE  195 (364)
T KOG0658|consen  118 ANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK--GEPNISYICSRYYRAPE  195 (364)
T ss_pred             cCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc--CCCceeEEEeccccCHH
Confidence            35678899999999999999999999999999999999999965 9999999999998763  34567899999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +++|...|+.++||||.||+++||+.|.++|+|.+..+|+..|++++|+|+.+++..+............ ....+..  
T Consensus       196 Lifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~i-k~~~~~~--  272 (364)
T KOG0658|consen  196 LIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQI-KAHPWHK--  272 (364)
T ss_pred             HHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccc-cccccee--
Confidence            9999999999999999999999999999999999999999999999999999999877655432111110 1111111  


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      -+....++++.||+.++|.++|.+|.||.|+|.||||+..
T Consensus       273 ~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  273 VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence            2456789999999999999999999999999999999873

>KOG0594|consensus

Probab=100.00  E-value=2.6e-44  Score=322.10  Aligned_cols=194  Identities=34%  Similarity=0.501  Sum_probs=166.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++...++.++.||+.||+|||+++|+||||||+||||+.+|.+||+|||+|+....+ ....++.++|.||||||+++
T Consensus       115 ~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip-~~~yt~evvTlWYRaPEvLl  193 (323)
T KOG0594|consen  115 QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIP-MRTYTPEVVTLWYRAPEVLL  193 (323)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCC-cccccccEEEeeccCHHHhc
Confidence            34555678899999999999999999999999999999999999999999999976543 34578889999999999999


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      |...|++.+||||+|||++||+++.++|+|.++.+|+..|.+++|+|....|+..........  ..+.......+....
T Consensus       194 Gs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~--~f~~~~~~~~l~~~~  271 (323)
T KOG0594|consen  194 GSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKA--PFPKWPGPKDLSSIL  271 (323)
T ss_pred             CCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccc--cCcCCCCccchHHhc
Confidence            998899999999999999999999999999999999999999999999999988755444332  111111123344455


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      +..++.+.+++.+||+++|.+|+||..+|.||||...
T Consensus       272 ~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  272 PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             cccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            6666899999999999999999999999999999863

>KOG0667|consensus

Probab=100.00  E-value=1.7e-42  Score=331.06  Aligned_cols=195  Identities=27%  Similarity=0.384  Sum_probs=157.3

Q ss_pred             HHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC--CCCeEEeeCCcccccCCCCCCCccccccccccc
Q psy2865          75 KEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA--TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYR  152 (395)
Q Consensus        75 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~--~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~  152 (395)
                      +.+...|+-..++.++.||+.||.+||..||||+||||+||||..  ...|||+|||+||...    .....|++++.||
T Consensus       280 ~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~----q~vytYiQSRfYR  355 (586)
T KOG0667|consen  280 NNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES----QRVYTYIQSRFYR  355 (586)
T ss_pred             hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC----Ccceeeeeccccc
Confidence            445566888889999999999999999999999999999999974  4579999999999853    3445899999999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh-----hc---
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML-----RQ---  224 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~-----~~---  224 (395)
                      |||||+|.+ |+.++||||||||++||++|.|+|+|.++.+|++.|++++|.|++.++.........+..     +.   
T Consensus       356 APEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~  434 (586)
T KOG0667|consen  356 APEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVE  434 (586)
T ss_pred             cchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeee
Confidence            999999998 999999999999999999999999999999999999999999999877654322111110     00   


Q ss_pred             cc----------------------cCCccchhhccCC-CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         225 TR----------------------KSQSLSSLYSLSS-QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       225 ~~----------------------~~~~~~~~~~~~~-~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..                      .+.....+..... .....|.|||.+||.|||.+|+|+.|+|+||||..
T Consensus       435 ~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  435 TSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             ecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence            00                      0001111111112 44567899999999999999999999999999985

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.4e-40  Score=319.34  Aligned_cols=270  Identities=66%  Similarity=1.033  Sum_probs=216.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..........+..++|+.|+|||++.
T Consensus        98 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  177 (372)
T cd07853          98 QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILM  177 (372)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHc
Confidence            46788889999999999999999999999999999999999999999999999875443334455668899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...|+.++||||+||++|+|++|.+||.+.+..+++..|.+.+|.++.+.+........................+.+.
T Consensus       178 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (372)
T cd07853         178 GSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLS  257 (372)
T ss_pred             CCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccC
Confidence            86668999999999999999999999999999999999999999999998877665444444444333333334444556


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSA  318 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (395)
                      ...++.+.+||.+||.+||.+|||+.++|.||||......++.|.+.+|...+.              ...+..+.+|..
T Consensus       258 ~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~  323 (372)
T cd07853         258 SQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTSG--------------GRVYTSDFEPSA  323 (372)
T ss_pred             CCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCcchhccccccccccccc--------------cccCCcccCCCC
Confidence            677899999999999999999999999999999999887777776665544321              122334556666


Q ss_pred             CCCCCchhHHhhhhhhHHhhHHHHHHHhhhcCCCCCcccCcchh
Q psy2865         319 PQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSA  362 (395)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~i~~~I~~~~~~~~~p~~~~~~~q  362 (395)
                      +.+++...+....+...+++.++..+........+++.+++...
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (372)
T cd07853         324 NPPFDDEYEKNLTSVRQVKEELHQFILEQQQGNRVPLCINPQSA  367 (372)
T ss_pred             CCCCCcccccccCCHHHHHHHHHHHHHHhhccCCCCeeeccchh
Confidence            66777776666677778888888888888777777777766543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0665|consensus

Probab=100.00  E-value=4.3e-41  Score=295.23  Aligned_cols=235  Identities=29%  Similarity=0.451  Sum_probs=189.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      -.+.-.+++.++-|+++|+.|||+.||+||||||+||+++.++.+||+|||+|+....  .-.++.++.|+.|+|||+++
T Consensus       113 ~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~--~~~mtpyVvtRyyrapevil  190 (369)
T KOG0665|consen  113 MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT--DFMMTPYVVTRYYRAPEVIL  190 (369)
T ss_pred             HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCc--ccccCchhheeeccCchhee
Confidence            4456678889999999999999999999999999999999999999999999997643  24789999999999999999


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC----------
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS----------  228 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------  228 (395)
                      |.+ |...+||||+|||++||++|..+|+|.+..+|+.+|.+.+|+|.+.++..+.+-.+.++...+...          
T Consensus       191 ~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD  269 (369)
T KOG0665|consen  191 GMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPD  269 (369)
T ss_pred             ccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCc
Confidence            988 999999999999999999999999999999999999999999999999988776666555222111          


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGR  308 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (395)
                      ..+....+..+-.+..++||+.+||..||++|++++++|+||||..+   +..                           
T Consensus       270 ~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw---~~~---------------------------  319 (369)
T KOG0665|consen  270 SLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW---YDP---------------------------  319 (369)
T ss_pred             ccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee---ccc---------------------------
Confidence            11111112233456789999999999999999999999999999731   110                           


Q ss_pred             ccccCCCCCCCCCCCchhHHhhhhhhHHhhHHHHHHHhhhc
Q psy2865         309 QYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQLN  349 (395)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~I~~~~~  349 (395)
                        .....|.+ .+++..++....+..+|++.+++++..+..
T Consensus       320 --~ev~ap~p-e~~d~~~d~~~~t~~e~ke~If~ev~~f~~  357 (369)
T KOG0665|consen  320 --DEVEAPPP-EIYDKQLDEREHTIEEWKELIFKEVQRFEE  357 (369)
T ss_pred             --ccccCCCC-chhhhhcccccCCHHHHHHHHHHHHHhhcc
Confidence              00112222 255666666666788999999999988764

>KOG0592|consensus

Probab=100.00  E-value=1.3e-40  Score=310.48  Aligned_cols=169  Identities=22%  Similarity=0.346  Sum_probs=152.8

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC----------CC--cc
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN----------KA--MT  143 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~----------~~--~~  143 (395)
                      .+-+.|.+..+++|++||+.||+|||+.|||||||||+|||++.+|+++|+|||.|..+.+...          ..  ..
T Consensus       166 ~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~  245 (604)
T KOG0592|consen  166 KKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRS  245 (604)
T ss_pred             HHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCccc
Confidence            3458999999999999999999999999999999999999999999999999999998754211          11  25


Q ss_pred             cccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh
Q psy2865         144 QEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR  223 (395)
Q Consensus       144 ~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  223 (395)
                      ++|||..|.+||+|.... .+..+|||+||||+|.|+.|.|||.+.++..++..|+++                      
T Consensus       246 SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l----------------------  302 (604)
T KOG0592|consen  246 SFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL----------------------  302 (604)
T ss_pred             ceeeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh----------------------
Confidence            689999999999998876 799999999999999999999999999999999999764                      


Q ss_pred             ccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcc
Q psy2865         224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRL  277 (395)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  277 (395)
                                .+.+++.+++.+.|||.++|..||.+|+|++|+.+||||.+..+
T Consensus       303 ----------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw  346 (604)
T KOG0592|consen  303 ----------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW  346 (604)
T ss_pred             ----------cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence                      36788899999999999999999999999999999999987654

>KOG0575|consensus

Probab=100.00  E-value=7.6e-41  Score=316.63  Aligned_cols=165  Identities=28%  Similarity=0.391  Sum_probs=151.2

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +.+.++|.++++++.||+.||.|||+.+|||||||..|++++.+..|||+|||||..+..+.... .+.||||.|.||||
T Consensus       111 rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk-~TlCGTPNYIAPEV  189 (592)
T KOG0575|consen  111 RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK-KTLCGTPNYIAPEV  189 (592)
T ss_pred             hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccccc-ceecCCCcccChhH
Confidence            56789999999999999999999999999999999999999999999999999999877654444 44699999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +...+ ++..+||||+|||||.||.|+|||...+-.+.+..|..                                .-|.
T Consensus       190 l~k~g-HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~--------------------------------~~Y~  236 (592)
T KOG0575|consen  190 LNKSG-HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL--------------------------------NEYS  236 (592)
T ss_pred             hccCC-CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh--------------------------------cCcc
Confidence            99877 89999999999999999999999999999999998853                                3467


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      +|..++.++.|||.+||..||.+|||++++|.|+||..+
T Consensus       237 ~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  237 MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             cccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence            888999999999999999999999999999999999543

>KOG0666|consensus

Probab=100.00  E-value=9.9e-41  Score=291.63  Aligned_cols=197  Identities=33%  Similarity=0.476  Sum_probs=164.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC----CCeEEeeCCcccccCCCCCC--Cccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT----YSSKICDFGLARVEEPDPNK--AMTQEVVTQYYR  152 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~----~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~  152 (395)
                      +.++...++.++.||+.|+.|||++-|+||||||.|||+..+    |.|||+|||+||.+..+-..  .....+.|.|||
T Consensus       127 ~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYR  206 (438)
T KOG0666|consen  127 KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYR  206 (438)
T ss_pred             ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEec
Confidence            488889999999999999999999999999999999999877    89999999999987654222  234467899999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCC---------hHhHHHHHHHhcCCCCHHHHHhhhhhhhh--hh
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS---------PVQQLGLITDLLGTPTPEEMRHACDGAKC--HM  221 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~---------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~--~~  221 (395)
                      |||+++|..+|+.++|||++|||++||+|-.|+|.+..         ..+|+.+|.+++|+|....|+.+-.....  .+
T Consensus       207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l  286 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL  286 (438)
T ss_pred             ChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH
Confidence            99999999999999999999999999999999998753         36899999999999999999877332222  11


Q ss_pred             hh---ccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         222 LR---QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       222 ~~---~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..   ..-.+..+...+.....-++.+.+||.+||++||-+|+||+|+|+|+||...
T Consensus       287 s~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  287 SDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             HHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence            11   1112223555566666667779999999999999999999999999999874

>KOG0598|consensus

Probab=100.00  E-value=1.1e-40  Score=299.02  Aligned_cols=170  Identities=28%  Similarity=0.337  Sum_probs=148.9

Q ss_pred             HHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          75 KEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        75 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      -++++.|+|.++++|+++|+.||.|||+.|||||||||+|||+|..|+|+|+|||+++.... ......++|||+.||||
T Consensus       116 L~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~-~~~~t~tfcGT~eYmAP  194 (357)
T KOG0598|consen  116 LQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK-DGDATRTFCGTPEYMAP  194 (357)
T ss_pred             HHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc-CCCccccccCCccccCh
Confidence            46789999999999999999999999999999999999999999999999999999985433 23345568999999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++++.+ |+.++|+||+|+++|+|++|.+||.+.+.......|...-                               +
T Consensus       195 Eil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-------------------------------~  242 (357)
T KOG0598|consen  195 EILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-------------------------------L  242 (357)
T ss_pred             HHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-------------------------------C
Confidence            9999987 9999999999999999999999999999888888875411                               1


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCc----CHHHHHcCCccccCcc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRI----SVNSALCHPYLDEGRL  277 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~----ta~e~L~Hp~f~~~~~  277 (395)
                      ...+...+..++|||.++|..||++|.    .+.++-.||||....+
T Consensus       243 ~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW  289 (357)
T KOG0598|consen  243 PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW  289 (357)
T ss_pred             CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence            223344889999999999999999996    6889999999987544

>KOG0615|consensus

Probab=100.00  E-value=2.2e-40  Score=299.47  Aligned_cols=169  Identities=25%  Similarity=0.318  Sum_probs=139.4

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC---CCeEEeeCCcccccCCCCCCCcccccccccccc
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT---YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRA  153 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~---~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a  153 (395)
                      ..+.+.++..+.++.|++.|+.|||+.||+||||||+|||++.+   +.+||+|||+|+..+  ....+.+.|||+.|.|
T Consensus       269 ~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g--~~sfm~TlCGTpsYvA  346 (475)
T KOG0615|consen  269 ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG--EGSFMKTLCGTPSYVA  346 (475)
T ss_pred             hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc--cceehhhhcCCccccC
Confidence            35677888889999999999999999999999999999999866   889999999999865  3457888999999999


Q ss_pred             hhhhhcCC--CCCccchHHhHHHHHHHHHcCCCCCCCCChHh-HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc
Q psy2865         154 PEILMGAR--HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ-QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS  230 (395)
Q Consensus       154 PEvl~~~~--~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (395)
                      |||+.+.+  .|+.++||||+||++|-+++|.+||.+..... ...+|..  |...                        
T Consensus       347 PEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~--G~y~------------------------  400 (475)
T KOG0615|consen  347 PEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK--GRYA------------------------  400 (475)
T ss_pred             hhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc--Cccc------------------------
Confidence            99997543  24558899999999999999999998875444 3444432  1100                        


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                        -....+...+..+.+||.+||..||++|||+++||+||||...
T Consensus       401 --f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  401 --FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             --ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence              0112346678899999999999999999999999999999753

>KOG0581|consensus

Probab=100.00  E-value=1.2e-39  Score=292.36  Aligned_cols=164  Identities=21%  Similarity=0.292  Sum_probs=140.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      +.++|.....++.+|+.||.|||. ++||||||||+|||++..|.|||||||.+..+..   ....+++||..|||||.+
T Consensus       173 g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn---S~a~tfvGT~~YMsPERi  249 (364)
T KOG0581|consen  173 GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN---SIANTFVGTSAYMSPERI  249 (364)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh---hhcccccccccccChhhh
Confidence            568999999999999999999995 9999999999999999999999999999988743   356789999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCC--ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQ--SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~--~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .|.. |+.++||||||+++.||++|+.||...  ...+.+..+..++..|++                            
T Consensus       250 ~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP----------------------------  300 (364)
T KOG0581|consen  250 SGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP----------------------------  300 (364)
T ss_pred             cCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC----------------------------
Confidence            9986 999999999999999999999999874  223344444433333332                            


Q ss_pred             ccCCC-CCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQ-ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~-~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .++.. ++++|++|+..||+.||.+|+|+.|+|+|||+..
T Consensus       301 ~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~  340 (364)
T KOG0581|consen  301 RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKK  340 (364)
T ss_pred             CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhh
Confidence            24454 8999999999999999999999999999999975

>KOG0033|consensus

Probab=100.00  E-value=9.8e-39  Score=270.63  Aligned_cols=165  Identities=25%  Similarity=0.277  Sum_probs=146.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      .-+||..+.++++||+.||.|+|.+||||||+||.|+|+.+   ..-+||+|||+|..+.  .......++|||.|||||
T Consensus       105 ~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~--~g~~~~G~~GtP~fmaPE  182 (355)
T KOG0033|consen  105 EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN--DGEAWHGFAGTPGYLSPE  182 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC--CccccccccCCCcccCHH
Confidence            67899999999999999999999999999999999999964   3459999999999876  345677889999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++...+ |+.++|||+.|+|+|-|+.|.+||.+.+....+..|+..--..+                            .
T Consensus       183 vvrkdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~----------------------------~  233 (355)
T KOG0033|consen  183 VLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP----------------------------S  233 (355)
T ss_pred             HhhcCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC----------------------------C
Confidence            998877 99999999999999999999999999998888888875321111                            1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++.+++.+.+|+++||..||.+|+||.|+|+|||+.+
T Consensus       234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence            245788999999999999999999999999999999965

>KOG0616|consensus

Probab=100.00  E-value=7.1e-39  Score=278.49  Aligned_cols=164  Identities=25%  Similarity=0.301  Sum_probs=149.0

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +.++|++..+++|++||+.|+.|||+.+|++|||||+|||+|.+|.+||+|||+|..+.    ....+.|||+.|+|||+
T Consensus       137 k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~----~rT~TlCGTPeYLAPEi  212 (355)
T KOG0616|consen  137 KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS----GRTWTLCGTPEYLAPEI  212 (355)
T ss_pred             hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec----CcEEEecCCccccChHH
Confidence            45689999999999999999999999999999999999999999999999999999863    23556799999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +...+ |+.++|+||||+++|||+.|.+||.+.+...++..|++                                ....
T Consensus       213 i~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~--------------------------------~~v~  259 (355)
T KOG0616|consen  213 IQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILE--------------------------------GKVK  259 (355)
T ss_pred             hhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHh--------------------------------Cccc
Confidence            99887 99999999999999999999999999999999999965                                3456


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCcc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGRL  277 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~~  277 (395)
                      +|+..++++.|||.++|+.|-.+|.     ...++..||||.+..+
T Consensus       260 fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W  305 (355)
T KOG0616|consen  260 FPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDW  305 (355)
T ss_pred             CCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccH
Confidence            7889999999999999999999994     5789999999986433

>KOG0671|consensus

Probab=100.00  E-value=2.6e-39  Score=290.23  Aligned_cols=191  Identities=23%  Similarity=0.363  Sum_probs=151.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC--------------------CCCeEEeeCCcccccCCCC
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA--------------------TYSSKICDFGLARVEEPDP  138 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~--------------------~~~vKl~DFGla~~~~~~~  138 (395)
                      ..|+-..++.++.|++.++.+||+.+++|.||||+|||+-+                    +..|+|+|||.|....   
T Consensus       187 ~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~---  263 (415)
T KOG0671|consen  187 IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH---  263 (415)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceec---
Confidence            45778889999999999999999999999999999999953                    2347999999998743   


Q ss_pred             CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhh-hhh
Q psy2865         139 NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHAC-DGA  217 (395)
Q Consensus       139 ~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~-~~~  217 (395)
                       ...+..+.|++||||||++|.+ |+.++||||+||||+||++|..+|+++++.++|++|..++|+.|..++.+.. ...
T Consensus       264 -e~hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Ky  341 (415)
T KOG0671|consen  264 -EHHSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKY  341 (415)
T ss_pred             -cCcceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhh
Confidence             3346679999999999999998 9999999999999999999999999999999999999999977777665542 111


Q ss_pred             hhhhhhcccc-------------CCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         218 KCHMLRQTRK-------------SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       218 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      -....-.|..             ..++.....-.+.....+.|||.+||.+||.+|+|+.|||.||||..
T Consensus       342 f~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~  411 (415)
T KOG0671|consen  342 FRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFAR  411 (415)
T ss_pred             hhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhc
Confidence            0000001110             11111112222334557899999999999999999999999999975

>KOG1290|consensus

Probab=100.00  E-value=8.2e-39  Score=294.55  Aligned_cols=147  Identities=32%  Similarity=0.508  Sum_probs=132.1

Q ss_pred             eEEeeCCcccccCCCCCCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCC------hHhHHH
Q psy2865         123 SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PVQQLG  196 (395)
Q Consensus       123 vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~------~~~~l~  196 (395)
                      |||+|||.|||+    ..++|..|+|+.|||||||+|.+ |++.+||||++||+|||+||.+||..++      +.++++
T Consensus       393 vKIaDlGNACW~----~khFT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA  467 (590)
T KOG1290|consen  393 VKIADLGNACWV----HKHFTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA  467 (590)
T ss_pred             EEEeeccchhhh----hhhhchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence            589999999994    57899999999999999999998 9999999999999999999999997653      578999


Q ss_pred             HHHHhcCCCCHHHH----------HhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHH
Q psy2865         197 LITDLLGTPTPEEM----------RHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSA  266 (395)
Q Consensus       197 ~i~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~  266 (395)
                      .|++++|..|+...          .+......+..++.|+....+...|.|+...+.+|.|||..||+++|++|+||.++
T Consensus       468 ~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~c  547 (590)
T KOG1290|consen  468 LIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQC  547 (590)
T ss_pred             HHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHH
Confidence            99999998877543          34445566777888999999999999999999999999999999999999999999


Q ss_pred             HcCCcccc
Q psy2865         267 LCHPYLDE  274 (395)
Q Consensus       267 L~Hp~f~~  274 (395)
                      |+|||+..
T Consensus       548 l~hPwLn~  555 (590)
T KOG1290|consen  548 LKHPWLNP  555 (590)
T ss_pred             hcCccccC
Confidence            99999975

>KOG0588|consensus

Probab=100.00  E-value=3.6e-38  Score=299.96  Aligned_cols=164  Identities=27%  Similarity=0.395  Sum_probs=150.0

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +.+.|++..++.+++||+.|+.|||..+|+||||||+|+|++..+.|||+|||+|....  .+..+.+.||+++|.|||+
T Consensus       105 ~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~--~gklLeTSCGSPHYA~PEI  182 (786)
T KOG0588|consen  105 RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV--PGKLLETSCGSPHYAAPEI  182 (786)
T ss_pred             hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc--CCccccccCCCcccCCchh
Confidence            35789999999999999999999999999999999999999999999999999998754  3466778899999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.|.++.+.++||||.|+|||.||+|..||.+.+-...|.++..                                ..|.
T Consensus       183 V~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~--------------------------------G~f~  230 (786)
T KOG0588|consen  183 VSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQR--------------------------------GVFE  230 (786)
T ss_pred             hcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHc--------------------------------Cccc
Confidence            99999778999999999999999999999998877777776643                                4578


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +|.++++++.|||.+||..||++|+|.++++.|||+..
T Consensus       231 MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g  268 (786)
T KOG0588|consen  231 MPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG  268 (786)
T ss_pred             CCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence            89999999999999999999999999999999999976

>KOG0662|consensus

Probab=100.00  E-value=3.6e-38  Score=255.70  Aligned_cols=193  Identities=29%  Similarity=0.421  Sum_probs=164.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .+.+..+.++..+-|++.|+.++|++++.|||+||+|+||+.+|.+||+|||+|+.++.+ ....+..+.|.||++|.|+
T Consensus        95 ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip-vrcysaevvtlwyrppdvl  173 (292)
T KOG0662|consen   95 NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VRCYSAEVVTLWYRPPDVL  173 (292)
T ss_pred             CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc-eEeeeceeeeeeccCccee
Confidence            445566778889999999999999999999999999999999999999999999988653 3456667889999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .|..-|++++||||.|||++|+. .|+++|+|.+..+|+.+|..++|+|..+.|+.+.....+...   +.....-.+.+
T Consensus       174 fgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y---p~ypattswsq  250 (292)
T KOG0662|consen  174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY---PIYPATTSWSQ  250 (292)
T ss_pred             eeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc---CCccccchHHH
Confidence            99988999999999999999998 899999999999999999999999999999877544332211   11111223344


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +-+..+...+||+.++|.-+|..|++|+.+|+||||.+
T Consensus       251 ivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  251 IVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             HhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence            55677778899999999999999999999999999975

>KOG0605|consensus

Probab=100.00  E-value=1.9e-37  Score=289.36  Aligned_cols=173  Identities=25%  Similarity=0.364  Sum_probs=144.2

Q ss_pred             HHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCC------------------
Q psy2865          75 KEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEP------------------  136 (395)
Q Consensus        75 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~------------------  136 (395)
                      ..+...|+++.+++|+++.+.|+..+|+.|||||||||+|+|||..|++||+||||+..+..                  
T Consensus       232 L~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~  311 (550)
T KOG0605|consen  232 LMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLS  311 (550)
T ss_pred             HHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhc
Confidence            45678899999999999999999999999999999999999999999999999999854321                  


Q ss_pred             -----CCCC-----------------------CcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCC
Q psy2865         137 -----DPNK-----------------------AMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQA  188 (395)
Q Consensus       137 -----~~~~-----------------------~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~  188 (395)
                           +...                       ...+.+|||-|+||||+++.+ |+..+|+|||||||||||.|.|||.+
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~~~cDwWSLG~ImyEmLvGyPPF~s  390 (550)
T KOG0605|consen  312 EAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YGKECDWWSLGCIMYEMLVGYPPFCS  390 (550)
T ss_pred             cCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CCccccHHHHHHHHHHHHhCCCCCCC
Confidence                 0000                       001249999999999999987 99999999999999999999999999


Q ss_pred             CChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcC---HHH
Q psy2865         189 QSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRIS---VNS  265 (395)
Q Consensus       189 ~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t---a~e  265 (395)
                      .++.+.+..|+..-...                            .++-....+.++.|||.+||. ||+.|..   ++|
T Consensus       391 ~tp~~T~rkI~nwr~~l----------------------------~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~E  441 (550)
T KOG0605|consen  391 ETPQETYRKIVNWRETL----------------------------KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEE  441 (550)
T ss_pred             CCHHHHHHHHHHHhhhc----------------------------cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence            99999999987521100                            011123456899999999999 9999984   999


Q ss_pred             HHcCCccccCcc
Q psy2865         266 ALCHPYLDEGRL  277 (395)
Q Consensus       266 ~L~Hp~f~~~~~  277 (395)
                      +..||||.+..+
T Consensus       442 IK~HPfF~~v~W  453 (550)
T KOG0605|consen  442 IKKHPFFKGVDW  453 (550)
T ss_pred             HhcCCccccCCc
Confidence            999999987544

>KOG0599|consensus

Probab=100.00  E-value=4.8e-38  Score=270.34  Aligned_cols=166  Identities=23%  Similarity=0.296  Sum_probs=143.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      -.+||..++.+++|+..|+.|||..+||||||||+|||++++..++|+|||+|+.+.  ....+...|||+.|.|||.+.
T Consensus       118 VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~--~GekLrelCGTPgYLAPEtik  195 (411)
T KOG0599|consen  118 VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE--PGEKLRELCGTPGYLAPETIK  195 (411)
T ss_pred             eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC--CchhHHHhcCCCcccChhhee
Confidence            456788889999999999999999999999999999999999999999999999876  346788889999999999985


Q ss_pred             -----cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         159 -----GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       159 -----~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                           +.+.|+..+|+|++|+|||.|+.|.+||........+..|++.--..                            
T Consensus       196 C~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF----------------------------  247 (411)
T KOG0599|consen  196 CSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQF----------------------------  247 (411)
T ss_pred             eecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccccc----------------------------
Confidence                 34559999999999999999999999998877777777776521111                            


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+-+.+.+....|||.+||+.||.+|+|+.|+|.||||..
T Consensus       248 ~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  248 RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            11234677889999999999999999999999999999964

>KOG0694|consensus

Probab=100.00  E-value=1.7e-37  Score=297.16  Aligned_cols=167  Identities=21%  Similarity=0.282  Sum_probs=149.2

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +...|++.++++|+++|+.||.|||.+||||||||.+|||+|..|+|||+|||+++..-. .....+++|||+.|+|||+
T Consensus       461 ~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~-~g~~TsTfCGTpey~aPEi  539 (694)
T KOG0694|consen  461 HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG-QGDRTSTFCGTPEFLAPEV  539 (694)
T ss_pred             ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC-CCCccccccCChhhcChhh
Confidence            347899999999999999999999999999999999999999999999999999985332 2346778999999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++|+|||||+||||+.|.+||+|.++.+.+.-|+.                                .-..
T Consensus       540 l~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~--------------------------------d~~~  586 (694)
T KOG0694|consen  540 LTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN--------------------------------DEVR  586 (694)
T ss_pred             hccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc--------------------------------CCCC
Confidence            99987 99999999999999999999999999999999998853                                2234


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCcc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGRL  277 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~~  277 (395)
                      .|..++.++.++|.+||+.||++|..     +.++..||||....+
T Consensus       587 yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w  632 (694)
T KOG0694|consen  587 YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW  632 (694)
T ss_pred             CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence            56778999999999999999999995     578999999987654

>KOG0669|consensus

Probab=100.00  E-value=6.5e-37  Score=260.62  Aligned_cols=196  Identities=28%  Similarity=0.377  Sum_probs=161.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC---CCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD---PNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~---~~~~~~~~~~t~~y~aPE  155 (395)
                      -+|+..++..++.+++.||.|+|...|+|||+|+.|+||+.+|.+||+|||+|+.+...   .....+..+.|.||++||
T Consensus       119 vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppE  198 (376)
T KOG0669|consen  119 VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPE  198 (376)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHH
Confidence            45677778889999999999999999999999999999999999999999999876432   223467778899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc-cchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS-LSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  234 (395)
                      .++|...|++++|||..|||++||++|.++|+|.+...++..|..++|...++.|+..............+.... .+..
T Consensus       199 llLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv  278 (376)
T KOG0669|consen  199 LLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKV  278 (376)
T ss_pred             HhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhh
Confidence            999999999999999999999999999999999999999999999999999999988755444333321111110 0011


Q ss_pred             hc--cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YS--LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~--~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..  .+-.-++.+.|||.+||.+||.+|++++++|+|.||-.
T Consensus       279 ~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k  320 (376)
T KOG0669|consen  279 KNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK  320 (376)
T ss_pred             hhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence            10  11223678999999999999999999999999999954

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=3e-36  Score=279.16  Aligned_cols=191  Identities=27%  Similarity=0.442  Sum_probs=155.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... .......++|+.|+|||++.
T Consensus        98 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  176 (288)
T cd07871          98 NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP-TKTYSNEVVTLWYRPPDVLL  176 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC-CccccCceecccccChHHhc
Confidence            34677788899999999999999999999999999999999999999999999864322 22334557899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+...+|.|+.+.|+.............+.  ..........
T Consensus       177 ~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  254 (288)
T cd07871         177 GSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQ--YRAQPLINHA  254 (288)
T ss_pred             CCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCc--cCCCchHHhC
Confidence            75558999999999999999999999999999999999999999999999887654322111111000  0111222344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+.++.|||.+||.+||.+||||.|+|+||||
T Consensus       255 ~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         255 PRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             CCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            5678899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.5e-36  Score=294.19  Aligned_cols=192  Identities=25%  Similarity=0.434  Sum_probs=155.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-CeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++ .+||+|||+|+....  ......++||+.|+|||+
T Consensus       164 ~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~--~~~~~~~~~t~~y~aPE~  241 (440)
T PTZ00036        164 NHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLA--GQRSVSYICSRFYRAPEL  241 (440)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccC--CCCcccCCCCcCccCHHH
Confidence            45678888899999999999999999999999999999999654 799999999986542  223445688999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...|+.++||||+||++|+|++|.+||.+.+..+++..|...+|.|..+.+............ .......+  ...
T Consensus       242 ~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~l--~~~  318 (440)
T PTZ00036        242 MLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKF-PDVKPKDL--KKV  318 (440)
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccC-CccCchhH--HHH
Confidence            987656899999999999999999999999999999999999999999988776544221110000 00001111  122


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ++...+.++.+||.+||.+||.+|+||.|+|+||||..
T Consensus       319 ~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        319 FPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             hccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence            44567889999999999999999999999999999975

>KOG0578|consensus

Probab=100.00  E-value=2.3e-36  Score=284.07  Aligned_cols=164  Identities=24%  Similarity=0.340  Sum_probs=145.4

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .++|.+++.+.++++.||.|||..||||||||.+|||++.+|.|||+|||++..+..... ..+..+||++|||||++..
T Consensus       365 ~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~TmVGTPYWMAPEVvtr  443 (550)
T KOG0578|consen  365 RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRSTMVGTPYWMAPEVVTR  443 (550)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC-ccccccCCCCccchhhhhh
Confidence            478889999999999999999999999999999999999999999999999988765443 4556699999999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. |++++||||||+|+.||+-|.|||-.+++...+.+|.. -|+|.                            ...+.
T Consensus       444 k~-YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~----------------------------lk~~~  493 (550)
T KOG0578|consen  444 KP-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPK----------------------------LKNPE  493 (550)
T ss_pred             cc-cCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCC----------------------------cCCcc
Confidence            76 99999999999999999999999999888888888754 23322                            34567


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .+++.+.|||.+||++|+.+|+||.++|+||||..
T Consensus       494 klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  494 KLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             ccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence            88999999999999999999999999999999953

>KOG0583|consensus

Probab=100.00  E-value=3.6e-36  Score=284.44  Aligned_cols=164  Identities=23%  Similarity=0.350  Sum_probs=144.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-CCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      .+.+.|..++.+++||+.|++|||+.||+||||||+|||++.+ +.+||+|||++.... .........|||+.|+|||+
T Consensus       114 ~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~-~~~~~l~t~cGsp~Y~aPEv  192 (370)
T KOG0583|consen  114 KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP-GEDGLLKTFCGSPAYAAPEV  192 (370)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC-CCCCcccCCCCCcccCCHHH
Confidence            5778889999999999999999999999999999999999999 999999999999763 13356777899999999999


Q ss_pred             hhcCC-CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGAR-HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~-~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. +-+.++||||+|+++|.|++|..||...+....+..|..                                ..+
T Consensus       193 l~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~--------------------------------~~~  240 (370)
T KOG0583|consen  193 LSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK--------------------------------GEF  240 (370)
T ss_pred             hCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc--------------------------------CCc
Confidence            99876 446899999999999999999999999777776666532                                234


Q ss_pred             ccCCCC-CHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQA-TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~-~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .++..+ ++.+.+||.+||..||..|+|+.+++.||||..
T Consensus       241 ~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  241 KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            566666 999999999999999999999999999999985

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.5e-35  Score=274.17  Aligned_cols=193  Identities=28%  Similarity=0.425  Sum_probs=152.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||..||+||||||+||+++.++.+||+|||++..............++|+.|+|||++.
T Consensus        95 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (287)
T cd07848          95 NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLL  174 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHc
Confidence            45788888999999999999999999999999999999999999999999999875433233344567899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|.+||.+.+..+.+..+....|..+...+..............+.............
T Consensus       175 ~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (287)
T cd07848         175 GAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYL  253 (287)
T ss_pred             CCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhh
Confidence            876 8999999999999999999999999999888888888888888877665432211111111111000111111223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...+..+.+||.+||.+||.+|||++++|+||||
T Consensus       254 ~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         254 GILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            4578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.2e-35  Score=291.31  Aligned_cols=191  Identities=20%  Similarity=0.323  Sum_probs=146.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCC----------------CeEEeeCCcccccCCCCCCC
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATY----------------SSKICDFGLARVEEPDPNKA  141 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~----------------~vKl~DFGla~~~~~~~~~~  141 (395)
                      ..+++..+..++.||+.||.|||. .|||||||||+|||++.++                .+||+|||+++..    ...
T Consensus       226 ~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~----~~~  301 (467)
T PTZ00284        226 GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDE----RHS  301 (467)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccC----ccc
Confidence            468888889999999999999997 5999999999999998655                4999999998753    223


Q ss_pred             cccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhh-h
Q psy2865         142 MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKC-H  220 (395)
Q Consensus       142 ~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~-~  220 (395)
                      .+..+||+.|+|||++.+.. |+.++|||||||++|||++|.+||.+.+..+++..|...+|.++..+.......... .
T Consensus       302 ~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~  380 (467)
T PTZ00284        302 RTAIVSTRHYRSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLL  380 (467)
T ss_pred             cccccCCccccCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHH
Confidence            45678999999999999876 899999999999999999999999999999999999999998876644322111000 0


Q ss_pred             hh-----hccccCCccchhh---cc-CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         221 ML-----RQTRKSQSLSSLY---SL-SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       221 ~~-----~~~~~~~~~~~~~---~~-~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..     ........+....   .+ ....++.+.|||.+||.+||.+||||.|+|+||||..
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~  443 (467)
T PTZ00284        381 YNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK  443 (467)
T ss_pred             hhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence            00     0000000000000   00 0112567899999999999999999999999999975

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=7.4e-35  Score=275.84  Aligned_cols=196  Identities=35%  Similarity=0.533  Sum_probs=155.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC--CCCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP--NKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~--~~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......  .......++|+.|+|||
T Consensus        97 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE  176 (338)
T cd07859          97 NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE  176 (338)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHH
Confidence            3468888999999999999999999999999999999999999999999999998643211  12234568999999999


Q ss_pred             hhhcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+. ..++.++|||||||++|+|++|.+||.+.+...++..+...+|.++...+..+................ ...+
T Consensus       177 ~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~  255 (338)
T cd07859         177 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQ-PVPF  255 (338)
T ss_pred             HHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccC-CCch
Confidence            98652 248999999999999999999999999999999999999999999888776553222111111111111 1112


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+..++.+.+||.+||..||++|||++++|+||||..
T Consensus       256 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~  295 (338)
T cd07859         256 SQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG  295 (338)
T ss_pred             HHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence            2233567888999999999999999999999999999975

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0198|consensus

Probab=100.00  E-value=3.4e-36  Score=274.14  Aligned_cols=165  Identities=23%  Similarity=0.292  Sum_probs=135.1

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCC--CCCCCcccccccccccchhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEP--DPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~--~~~~~~~~~~~t~~y~aPEv  156 (395)
                      .|++..++.+++||+.||.|||++|||||||||+|||++. ++.+||+|||+|.....  ..........||+.|||||+
T Consensus       113 ~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEv  192 (313)
T KOG0198|consen  113 KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEV  192 (313)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchh
Confidence            6999999999999999999999999999999999999999 79999999999987652  12233456789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC-ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ-SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~-~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.....-+.++||||+||++.||+||.+||... .....+..|..  +.                            ...
T Consensus       193 i~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~--~~----------------------------~~P  242 (313)
T KOG0198|consen  193 IRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGR--ED----------------------------SLP  242 (313)
T ss_pred             hcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhc--cC----------------------------CCC
Confidence            985221234999999999999999999999873 22222222211  00                            112


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .++..+++++.+||.+||..||+.||||+++|.|||...
T Consensus       243 ~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  243 EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence            567789999999999999999999999999999999976

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.3e-34  Score=277.21  Aligned_cols=192  Identities=32%  Similarity=0.517  Sum_probs=152.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+|+....  ....+..++|+.|+|||++.+
T Consensus       122 ~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--~~~~~~~~~t~~y~aPE~~~~  199 (364)
T cd07875         122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG  199 (364)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC--CCcccCCcccCCcCCHHHHhC
Confidence            366777788999999999999999999999999999999999999999999986532  223455689999999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc-cCCccch-----
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR-KSQSLSS-----  233 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----  233 (395)
                      .. ++.++|||||||++|+|++|..||.+.+..+.+..+...+|.|.++.+..............+. ....+..     
T Consensus       200 ~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (364)
T cd07875         200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV  278 (364)
T ss_pred             CC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccc
Confidence            76 8999999999999999999999999999999999999999999988766553332221111110 0000000     


Q ss_pred             ----hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 ----LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ----~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                          ........+..+.+||.+||.+||.+|||+.++|+||||..
T Consensus       279 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         279 LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             cccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                01112234678899999999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3.4e-35  Score=275.77  Aligned_cols=194  Identities=29%  Similarity=0.451  Sum_probs=148.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee----cCCCCeEEeeCCcccccCCCCC--CCccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY----QATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYR  152 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~----~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~  152 (395)
                      ..+++..++.++.||+.||.|||+.||+||||||+|||+    +.++.+||+|||+|+.......  ......++|+.|+
T Consensus       103 ~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~  182 (317)
T cd07868         103 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYR  182 (317)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCcccccccc
Confidence            357788889999999999999999999999999999999    4567899999999987543211  2334568899999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh---------HhHHHHHHHhcCCCCHHHHHhhhhhhhhhh-h
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP---------VQQLGLITDLLGTPTPEEMRHACDGAKCHM-L  222 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~---------~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~-~  222 (395)
                      |||++.+...|+.++||||+||++|+|++|.+||.+...         ..++..+...+|.|....|........... .
T Consensus       183 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (317)
T cd07868         183 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLM  262 (317)
T ss_pred             CCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhh
Confidence            999998866689999999999999999999999976432         467888999999998887766532111100 0


Q ss_pred             h----ccccCCccch-hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         223 R----QTRKSQSLSS-LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       223 ~----~~~~~~~~~~-~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .    .......+.. +.......+..+.|||.+||.+||.+||||+|+|+||||
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         263 KDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            0    0000001101 111123346779999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0614|consensus

Probab=100.00  E-value=3.9e-35  Score=271.26  Aligned_cols=212  Identities=18%  Similarity=0.184  Sum_probs=170.6

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      +..++|.+.+++||++.+++|++|||+.|||+|||||+|++++.+|-+||.|||+|.....  .....++|||+.|.|||
T Consensus       512 rdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~--g~KTwTFcGTpEYVAPE  589 (732)
T KOG0614|consen  512 RDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS--GRKTWTFCGTPEYVAPE  589 (732)
T ss_pred             hhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc--CCceeeecCCcccccch
Confidence            4568999999999999999999999999999999999999999999999999999998763  34566789999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +++..+ .+.++|.||||+++|||++|.|||.+.+++..++.|.+.+                              ...
T Consensus       590 IILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi------------------------------d~i  638 (732)
T KOG0614|consen  590 IILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI------------------------------DKI  638 (732)
T ss_pred             hhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh------------------------------hhh
Confidence            999987 7999999999999999999999999999999999997643                              234


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQY  310 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (395)
                      .+|..++..+.+||+++...+|.+|..     +.++-.|-||.+    |..........+|+..++...++..+..+...
T Consensus       639 ~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g----fdweglr~~~L~pPi~~~va~ptD~s~Fd~~p  714 (732)
T KOG0614|consen  639 EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG----FDWEGLRSRTLPPPIIPSVANPTDVSNFDNFP  714 (732)
T ss_pred             hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc----CChhhhhhccCCCCccccCCCcccchhccCCC
Confidence            677888899999999999999999985     889999999987    32222222222333333444445555555544


Q ss_pred             ccCCCCCCCCCCCc
Q psy2865         311 TVDFEPSAPQPFDD  324 (395)
Q Consensus       311 ~~~~~~~~~~~~~~  324 (395)
                      ..+..|.+....+|
T Consensus       715 ~dnd~pppde~SGW  728 (732)
T KOG0614|consen  715 PDNDEPPPDELSGW  728 (732)
T ss_pred             cccCCCCchhcccC
Confidence            44444444444444

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=3.7e-35  Score=271.95  Aligned_cols=186  Identities=33%  Similarity=0.498  Sum_probs=152.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....  .......+|+.|+|||++.
T Consensus       105 ~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~  182 (290)
T cd07862         105 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEVLL  182 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC--cccccccccccccChHHHh
Confidence            34777888899999999999999999999999999999999999999999999865422  2344567899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|.+||.+.+..+.+..|....+.+.+..|+.........     ........+..+.
T Consensus       183 ~~~-~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  256 (290)
T cd07862         183 QSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-----FHSKSAQPIEKFV  256 (290)
T ss_pred             CCC-CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchh-----ccCCCCCCHHHHc
Confidence            765 8999999999999999999999999999999999999999988877665432111000     0011111222344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+..+.+||.+||..||++|||+.++|+||||
T Consensus       257 ~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         257 TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             cCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            5678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.8e-34  Score=273.98  Aligned_cols=191  Identities=34%  Similarity=0.527  Sum_probs=156.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...    ...+.+++|+.|+|||++.
T Consensus       113 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~----~~~~~~~~t~~y~aPE~~~  188 (343)
T cd07878         113 QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD----DEMTGYVATRWYRAPEIML  188 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC----CCcCCccccccccCchHhc
Confidence            458889999999999999999999999999999999999999999999999998653    2345568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+....|.+..+.+..+.............. .....+....
T Consensus       189 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  267 (343)
T cd07878         189 NWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPH-MPQQDLKKIF  267 (343)
T ss_pred             CCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhcccc-ccchhHHHhc
Confidence            755589999999999999999999999999998899999999999988877665533222111111111 0111222334


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+|||+.++|.||||..
T Consensus       268 ~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         268 RGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             cCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence            456788999999999999999999999999999975

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=5.4e-35  Score=272.72  Aligned_cols=194  Identities=26%  Similarity=0.377  Sum_probs=147.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...... .......++|+.|+|||++.
T Consensus        98 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  176 (303)
T cd07869          98 GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP-SHTYSNEVVTLWYRPPDVLL  176 (303)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC-CccCCCCcccCCCCChHHHc
Confidence            45778888999999999999999999999999999999999999999999999754322 22344567899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCC-hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc-cccCCccchhhc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQS-PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ-TRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  236 (395)
                      +...++.++||||+||++|+|++|.+||.+.. ..+++..+...++.+....|+............. ......+.....
T Consensus       177 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (303)
T cd07869         177 GSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWN  256 (303)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhh
Confidence            76568999999999999999999999998764 4567777888888887766654322111000000 000000111000


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ....+..+.+||.+||++||.+|+|+.|+|+||||..
T Consensus       257 -~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~  293 (303)
T cd07869         257 -KLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSD  293 (303)
T ss_pred             -ccCCChHHHHHHHHHhccCchhccCHHHHhcCccccc
Confidence             1124578999999999999999999999999999976

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=3e-34  Score=273.75  Aligned_cols=192  Identities=32%  Similarity=0.531  Sum_probs=152.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+|+....  .......++|+.|+|||++.+
T Consensus       115 ~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~t~~y~aPE~~~~  192 (355)
T cd07874         115 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG  192 (355)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC--ccccCCccccCCccCHHHHcC
Confidence            467777888999999999999999999999999999999999999999999986532  223455689999999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC----------C
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS----------Q  229 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~  229 (395)
                      .. ++.++||||+||++|+|++|..||.+.+..+.+..+.+.+|.+.++.+..............+...          .
T Consensus       193 ~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (355)
T cd07874         193 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS  271 (355)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccc
Confidence            76 899999999999999999999999999999999999999999988877655332222211111000          0


Q ss_pred             ccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ............+..+.+||.+||..||++|||+.|+|+||||..
T Consensus       272 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         272 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             ccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence            000011122334678899999999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0597|consensus

Probab=100.00  E-value=1.7e-35  Score=276.95  Aligned_cols=167  Identities=26%  Similarity=0.347  Sum_probs=147.1

Q ss_pred             HHHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccc
Q psy2865          74 KKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRA  153 (395)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a  153 (395)
                      --++.+.++|+.++.++.|++.||.|||+.+|+|||+||+|||++..+.+|+||||+|+.+.. .....+..-||+.|||
T Consensus        90 il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t~vltsikGtPlYmA  168 (808)
T KOG0597|consen   90 ILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NTSVLTSIKGTPLYMA  168 (808)
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc-CceeeeeccCcccccC
Confidence            346778999999999999999999999999999999999999999999999999999998764 2345677789999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+.+ |+..+|+||+|||+|||++|.|||...+-......|..                                .
T Consensus       169 PElv~e~p-yd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~--------------------------------d  215 (808)
T KOG0597|consen  169 PELVEEQP-YDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK--------------------------------D  215 (808)
T ss_pred             HHHHcCCC-ccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc--------------------------------C
Confidence            99999876 99999999999999999999999998776665555532                                1


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++...+..|.+||..+|..||..|+|+.+++.|||+.+
T Consensus       216 ~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  216 PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence            12345678999999999999999999999999999999864

>KOG0610|consensus

Probab=100.00  E-value=1e-34  Score=263.10  Aligned_cols=176  Identities=22%  Similarity=0.297  Sum_probs=147.9

Q ss_pred             HHHHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC---------------
Q psy2865          73 RKKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD---------------  137 (395)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~---------------  137 (395)
                      +++|..+.|++..++||+++|+.||.|||..|||+|||||+||||..+|+|.|.||-|+......               
T Consensus       168 rqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~  247 (459)
T KOG0610|consen  168 RQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQ  247 (459)
T ss_pred             HhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCC
Confidence            34567889999999999999999999999999999999999999999999999999987532100               


Q ss_pred             ----------------------------------------CCCCcccccccccccchhhhhcCCCCCccchHHhHHHHHH
Q psy2865         138 ----------------------------------------PNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFA  177 (395)
Q Consensus       138 ----------------------------------------~~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~  177 (395)
                                                              ......++|||-.|.|||||.|.+ .+.++|+|+||+.+|
T Consensus       248 ~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G-HgsAVDWWtfGIflY  326 (459)
T KOG0610|consen  248 PSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG-HGSAVDWWTFGIFLY  326 (459)
T ss_pred             cccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC-CCchhhHHHHHHHHH
Confidence                                                    001123469999999999999988 799999999999999


Q ss_pred             HHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCC
Q psy2865         178 ELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDP  257 (395)
Q Consensus       178 ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP  257 (395)
                      ||+.|..||.|.+..+.+..|+.   .+.                           .+.-.+..+..+.|||+++|..||
T Consensus       327 EmLyG~TPFKG~~~~~Tl~NIv~---~~l---------------------------~Fp~~~~vs~~akDLIr~LLvKdP  376 (459)
T KOG0610|consen  327 EMLYGTTPFKGSNNKETLRNIVG---QPL---------------------------KFPEEPEVSSAAKDLIRKLLVKDP  376 (459)
T ss_pred             HHHhCCCCcCCCCchhhHHHHhc---CCC---------------------------cCCCCCcchhHHHHHHHHHhccCh
Confidence            99999999999999999988853   111                           122223667899999999999999


Q ss_pred             CCCcC----HHHHHcCCccccCcccc
Q psy2865         258 TKRIS----VNSALCHPYLDEGRLRF  279 (395)
Q Consensus       258 ~~R~t----a~e~L~Hp~f~~~~~~~  279 (395)
                      .+|+.    |+|+-+||||.+..+.+
T Consensus       377 ~kRlg~~rGA~eIK~HpFF~gVnWaL  402 (459)
T KOG0610|consen  377 SKRLGSKRGAAEIKRHPFFEGVNWAL  402 (459)
T ss_pred             hhhhccccchHHhhcCccccCCChhh
Confidence            99998    99999999999855443

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.1e-34  Score=273.14  Aligned_cols=192  Identities=34%  Similarity=0.525  Sum_probs=152.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....  ....+..++|+.|+|||++.+
T Consensus       119 ~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~t~~y~aPE~~~~  196 (359)
T cd07876         119 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT--NFMMTPYVVTRYYRAPEVILG  196 (359)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccccc--CccCCCCcccCCCCCchhccC
Confidence            367777888999999999999999999999999999999999999999999986432  223455688999999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC-Cccchh----
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS-QSLSSL----  234 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----  234 (395)
                      .. |+.++||||+||++|+|++|.+||.+.+..+++..+.+.+|.|..+.+.................. ..+...    
T Consensus       197 ~~-~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
T cd07876         197 MG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDW  275 (359)
T ss_pred             CC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccc
Confidence            76 899999999999999999999999999999999999999999988776554332222111111100 001110    


Q ss_pred             -----hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 -----YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 -----~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                           .......+..+.+||.+||.+||++|||+.|+|+||||..
T Consensus       276 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         276 IFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             ccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                 1112234678999999999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-34  Score=277.43  Aligned_cols=195  Identities=17%  Similarity=0.134  Sum_probs=143.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.............+||+.|+|||++.
T Consensus       177 ~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  256 (391)
T PHA03212        177 RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLA  256 (391)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhc
Confidence            45778888999999999999999999999999999999999999999999999754322223344568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCC-------ChHhHHHHHHHhcCCCCHHHHHhhhhhhh-hh--hhhccccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQ-------SPVQQLGLITDLLGTPTPEEMRHACDGAK-CH--MLRQTRKS  228 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~-------~~~~~l~~i~~~~g~~~~~~~~~~~~~~~-~~--~~~~~~~~  228 (395)
                      +.. |+.++||||+||++|+|++|..+|.+.       +...++..|...+|.++.++......... .+  ........
T Consensus       257 ~~~-~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  335 (391)
T PHA03212        257 RDP-YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRK  335 (391)
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCC
Confidence            875 899999999999999999998776543       23567788888888776543211110000 00  00000000


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .............+..+.+||.+||.+||.+||||.|+|+||||..
T Consensus       336 ~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        336 PGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             CCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence            0000001111234567899999999999999999999999999975

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=3.4e-34  Score=265.15  Aligned_cols=185  Identities=31%  Similarity=0.486  Sum_probs=151.1

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....  ...+..++|..|+|||++.+
T Consensus       104 ~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~  181 (288)
T cd07863         104 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ--MALTPVVVTLWYRAPEVLLQ  181 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCc--ccCCCccccccccCchHhhC
Confidence            4788889999999999999999999999999999999999999999999999875422  23345678999999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++||||+||++|+|++|.++|.+.+..+.+..+....+.+....|+.........     .............+
T Consensus       182 ~~-~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  255 (288)
T cd07863         182 ST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGA-----FSPRGPRPVQSVVP  255 (288)
T ss_pred             CC-CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccc-----cCCCCCCchHHhCc
Confidence            76 8999999999999999999999999999989999999888887766554321111000     00111122234445


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ..+..+.+||.+||..||.+|||+.++|.||||
T Consensus       256 ~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         256 EIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             CcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            678889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=4.4e-34  Score=267.31  Aligned_cols=193  Identities=30%  Similarity=0.457  Sum_probs=156.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++..... .......++|..|+|||++.
T Consensus        99 ~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  177 (309)
T cd07872          99 NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP-TKTYSNEVVTLWYRPPDVLL  177 (309)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCC-ccccccccccccccCCHHHh
Confidence            34677778889999999999999999999999999999999999999999999864332 22234457899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+...+|.+....|+.............+..  .........
T Consensus       178 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  255 (309)
T cd07872         178 GSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKY--KPQPLINHA  255 (309)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCcc--CCCchhhhc
Confidence            765689999999999999999999999999999999999999999999988876533221111111110  111223344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +..++.+.+||.+||.+||.+|||+.++|+||||..
T Consensus       256 ~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         256 PRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             cCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence            567889999999999999999999999999999976

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0604|consensus

Probab=100.00  E-value=1.5e-34  Score=251.84  Aligned_cols=165  Identities=22%  Similarity=0.342  Sum_probs=135.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec---CCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ---ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~---~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ..-|+|+.+..++.||..|+.|||+.+|.||||||+|+|..   .+..+||+|||+|+....  ...+.+.|.|++|.||
T Consensus       155 ~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~--~~~L~TPc~TPyYvaP  232 (400)
T KOG0604|consen  155 DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE--PGDLMTPCFTPYYVAP  232 (400)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCC--CccccCCcccccccCH
Confidence            44699999999999999999999999999999999999997   467799999999987542  3456677999999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH----hHHHHHHHh-cCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV----QQLGLITDL-LGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~----~~l~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      |++-... |+.++|+||+|||+|-|++|.|||.+....    ..-.+|... ...|.                       
T Consensus       233 evlg~eK-ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~-----------------------  288 (400)
T KOG0604|consen  233 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPE-----------------------  288 (400)
T ss_pred             HHhCchh-cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCC-----------------------
Confidence            9986655 999999999999999999999999875432    222223211 11111                       


Q ss_pred             ccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                            .-|..+|..+.|+|+.||..+|.+|+|+.+++.|||+..
T Consensus       289 ------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~  327 (400)
T KOG0604|consen  289 ------PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ  327 (400)
T ss_pred             ------hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence                  223567889999999999999999999999999999975

>KOG0690|consensus

Probab=100.00  E-value=5.1e-34  Score=251.02  Aligned_cols=168  Identities=26%  Similarity=0.308  Sum_probs=149.7

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      .+++-|+|+++++|.++|+.||.|||+.+||+||||.+|+|+|.+|++||+|||++..... ....+..+|||+.|.|||
T Consensus       260 srer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~-~g~t~kTFCGTPEYLAPE  338 (516)
T KOG0690|consen  260 SRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK-YGDTTKTFCGTPEYLAPE  338 (516)
T ss_pred             hhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc-ccceeccccCChhhcCch
Confidence            4578899999999999999999999999999999999999999999999999999985332 345677899999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      |+-... |+.++|+|.+||+||||++|+.||.+.+....+..|+-                                .-.
T Consensus       339 VleDnD-YgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~--------------------------------ed~  385 (516)
T KOG0690|consen  339 VLEDND-YGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM--------------------------------EDL  385 (516)
T ss_pred             hhcccc-ccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh--------------------------------hhc
Confidence            997765 99999999999999999999999999998888888742                                234


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCcc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGRL  277 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~~  277 (395)
                      .+|..+++++..||..+|..||.+|..     |.++++|+||.+..+
T Consensus       386 kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W  432 (516)
T KOG0690|consen  386 KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW  432 (516)
T ss_pred             cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence            577889999999999999999999984     889999999987543

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.1e-33  Score=265.49  Aligned_cols=193  Identities=30%  Similarity=0.447  Sum_probs=146.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee----cCCCCeEEeeCCcccccCCCCC--CCcccccccccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY----QATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRA  153 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~----~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~a  153 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||+    +.++.+||+|||+|+.......  ......++|+.|+|
T Consensus       104 ~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07867         104 QLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccC
Confidence            46777888999999999999999999999999999999    4667899999999987543211  22345678999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh---------HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP---------VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ  224 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~---------~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  224 (395)
                      ||++.+...++.++||||+||++|+|++|.+||.+...         ..++..+...+|.+....|...........+..
T Consensus       184 PE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (317)
T cd07867         184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQK  263 (317)
T ss_pred             cHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhh
Confidence            99998766689999999999999999999999976432         456778888899888877765422211111100


Q ss_pred             -----cccCCccc-hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         225 -----TRKSQSLS-SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       225 -----~~~~~~~~-~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                           ........ .........+..+.+||.+||..||.+||||.|+|+||||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         264 DFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                 00000010 1112223456789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0591|consensus

Probab=100.00  E-value=4.7e-34  Score=246.76  Aligned_cols=165  Identities=19%  Similarity=0.273  Sum_probs=139.1

Q ss_pred             HHHHHHHhhhcCCCCchhhHHhhcCCCCccc--cC--ccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccc
Q psy2865          72 RRKKEREKKRSSRRKPFKLSEISATRPDSTI--DG--YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVV  147 (395)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~--iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~  147 (395)
                      +.-+++.+.++|.++..++.|++.||..+|.  ..  |+||||||.||+++.+|.|||+|||+++.+... .....+++|
T Consensus       112 k~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~-~tfA~S~VG  190 (375)
T KOG0591|consen  112 KHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK-TTFAHSLVG  190 (375)
T ss_pred             HHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcch-hHHHHhhcC
Confidence            3445667889999999999999999999999  44  999999999999999999999999999987643 345677899


Q ss_pred             cccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcccc
Q psy2865         148 TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK  227 (395)
Q Consensus       148 t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  227 (395)
                      ||+||+||++.+.+ |+.++||||+||++|||+.-.+||.|.+-.....+|... ..                       
T Consensus       191 TPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~-----------------------  245 (375)
T KOG0591|consen  191 TPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DY-----------------------  245 (375)
T ss_pred             CCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CC-----------------------
Confidence            99999999999987 999999999999999999999999999766666666542 11                       


Q ss_pred             CCccchhhccC-CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         228 SQSLSSLYSLS-SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       228 ~~~~~~~~~~~-~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                             ..+| ...+.++..+|..|+..||+.||+.     +|++..
T Consensus       246 -------~~~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~d  281 (375)
T KOG0591|consen  246 -------PPLPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQD  281 (375)
T ss_pred             -------CCCcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHH
Confidence                   1122 3457788999999999999999986     666644

>KOG0585|consensus

Probab=100.00  E-value=5.8e-34  Score=261.99  Aligned_cols=165  Identities=19%  Similarity=0.274  Sum_probs=139.7

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC----CCCCcccccccccccchhh
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD----PNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~----~~~~~~~~~~t~~y~aPEv  156 (395)
                      +++.+++.|+++++.||.|||.+|||||||||+|+|++.+|.|||+|||.+..+...    ....+...+||+.|+|||.
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~  286 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPEL  286 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHh
Confidence            788899999999999999999999999999999999999999999999999865221    1123344699999999999


Q ss_pred             hhcC---CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         157 LMGA---RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       157 l~~~---~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      +.+.   ...+.+.||||+||+||.|+.|..||-+....+.+..|+..-                              -
T Consensus       287 c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~p------------------------------L  336 (576)
T KOG0585|consen  287 CSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDP------------------------------L  336 (576)
T ss_pred             hcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCc------------------------------c
Confidence            9872   234678999999999999999999999999999999886421                              0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      .+...+...+.+.|||.+||..||+.|+|..++..|||....
T Consensus       337 ~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  337 EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            112223568899999999999999999999999999999763

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=4.4e-33  Score=263.77  Aligned_cols=233  Identities=36%  Similarity=0.538  Sum_probs=178.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||+++...... .....+++|..|+|||++.
T Consensus       103 ~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  181 (337)
T cd07858         103 QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG-DFMTEYVVTRWYRAPELLL  181 (337)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc-ccccccccccCccChHHHh
Confidence            568888999999999999999999999999999999999999999999999998654321 3345567899999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|||||||++|+|++|.+||.+.+....+..+...+|.+..+.+................... ........
T Consensus       182 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  260 (337)
T cd07858         182 NCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTP-RQSFARLF  260 (337)
T ss_pred             cCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCccc-ccCHHHHc
Confidence            64458999999999999999999999999998888899999999988887764432222111111111100 01112334


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSA  318 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (395)
                      +..++.+.+||.+||..||++|||+.++|+||||.....                                  +...++.
T Consensus       261 ~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~----------------------------------~~~~~~~  306 (337)
T cd07858         261 PHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD----------------------------------PSDEPVC  306 (337)
T ss_pred             ccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC----------------------------------cccCccC
Confidence            568899999999999999999999999999999975210                                  1223444


Q ss_pred             CCCCCchhHHhhhhhhHHhhHHHHHHHhh
Q psy2865         319 PQPFDDTWERKLTSVQQVKEEMHKFIAEQ  347 (395)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~i~~~I~~~  347 (395)
                      +.+|+.+++........+++.+..+.+.+
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (337)
T cd07858         307 QTPFSFDFEEDALTEEDIKELIYNEMLAY  335 (337)
T ss_pred             CCccchhhhhhhcCHHHHHHHHHHHHhhc
Confidence            55677777777777777777777665544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0670|consensus

Probab=100.00  E-value=1e-34  Score=269.14  Aligned_cols=195  Identities=29%  Similarity=0.433  Sum_probs=155.9

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      .+.-.|.-..++.|+.|+..||..|-..||+|.||||+|||++. ...+||||||.|....   ....|.|..+++|+||
T Consensus       528 G~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~---eneitPYLVSRFYRaP  604 (752)
T KOG0670|consen  528 GRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFAS---ENEITPYLVSRFYRAP  604 (752)
T ss_pred             CcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccc---cccccHHHHHHhccCc
Confidence            34556777889999999999999999999999999999999995 4668999999998653   3457889999999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhh-----h-----hc
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHM-----L-----RQ  224 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~-----~-----~~  224 (395)
                      |+|+|.+ |+...|+||+||+||||+||..+|+|.+..+.|...+++-|..|..+++........+.     +     ..
T Consensus       605 EIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~v  683 (752)
T KOG0670|consen  605 EIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKV  683 (752)
T ss_pred             ceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEecccc
Confidence            9999998 99999999999999999999999999999999999999999999988876533221111     0     00


Q ss_pred             --------cccC---Cccch-hh---ccCCC---CCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         225 --------TRKS---QSLSS-LY---SLSSQ---ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       225 --------~~~~---~~~~~-~~---~~~~~---~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                              ....   ..+.. +.   .++..   .-..+.+||.+||.+||++|+|+.|||.||||+.
T Consensus       684 T~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  684 TEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             ccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                    0000   01111 11   11111   2247899999999999999999999999999964

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=7e-34  Score=267.60  Aligned_cols=164  Identities=26%  Similarity=0.303  Sum_probs=138.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.... ........+||+.|+|||++
T Consensus        89 ~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~-~~~~~~~~~gt~~y~aPE~~  167 (323)
T cd05571          89 ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKTFCGTPEYLAPEVL  167 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc-CCCcccceecCccccChhhh
Confidence            45688889999999999999999999999999999999999999999999999975322 12234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++||||+||++|+|++|..||.+.+....+..+..                                ....+
T Consensus       168 ~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~--------------------------------~~~~~  214 (323)
T cd05571         168 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--------------------------------EEIRF  214 (323)
T ss_pred             cCCC-CCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc--------------------------------CCCCC
Confidence            8876 89999999999999999999999988776555544421                                11234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      +...++.+.+||.+||..||++||     ++.++++||||...
T Consensus       215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            456788999999999999999999     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0986|consensus

Probab=100.00  E-value=1.2e-33  Score=258.30  Aligned_cols=169  Identities=22%  Similarity=0.276  Sum_probs=141.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..|++.++.||+++|+.||.+||..+||+|||||+|||+|+.|+|+|.|+|||+-+..  ....+..+||..||||||+.
T Consensus       282 ~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~--g~~~~~rvGT~GYMAPEvl~  359 (591)
T KOG0986|consen  282 PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE--GKPIRGRVGTVGYMAPEVLQ  359 (591)
T ss_pred             CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC--CCccccccCcccccCHHHHc
Confidence            3688999999999999999999999999999999999999999999999999997653  34566679999999999999


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. |+.++|+||+||++|||+.|..||...-...--..|-...                            +.....++
T Consensus       360 ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~----------------------------~~~~~ey~  410 (591)
T KOG0986|consen  360 NEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRT----------------------------LEDPEEYS  410 (591)
T ss_pred             CCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHH----------------------------hcchhhcc
Confidence            887 9999999999999999999999997654322211111100                            11223456


Q ss_pred             CCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGRLR  278 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~~~  278 (395)
                      ..+++++.+|...+|..||.+|.     +++++.+||||.+..++
T Consensus       411 ~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~  455 (591)
T KOG0986|consen  411 DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR  455 (591)
T ss_pred             cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence            78999999999999999999998     57899999999875443

>KOG0612|consensus

Probab=100.00  E-value=3.1e-33  Score=279.76  Aligned_cols=169  Identities=24%  Similarity=0.327  Sum_probs=148.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...++++.++||+++|+.||+.+|+.|+|||||||+|||||..|+|||+|||.+-.+..++.-.....||||-|.+||++
T Consensus       169 ~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvL  248 (1317)
T KOG0612|consen  169 FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVL  248 (1317)
T ss_pred             cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHH
Confidence            34688999999999999999999999999999999999999999999999999988887776677788999999999999


Q ss_pred             h----cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 M----GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~----~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .    +.+.|+..+|+||+||++|||+.|..||++.+-++.+.+|+..-                              .
T Consensus       249 qs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk------------------------------~  298 (1317)
T KOG0612|consen  249 QSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK------------------------------E  298 (1317)
T ss_pred             HhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh------------------------------h
Confidence            5    21358999999999999999999999999999999999998641                              1


Q ss_pred             hhccC--CCCCHHHHHHHHHccccCCCCCcC---HHHHHcCCccccCcc
Q psy2865         234 LYSLS--SQATGEAVHLLVQMLYFDPTKRIS---VNSALCHPYLDEGRL  277 (395)
Q Consensus       234 ~~~~~--~~~~~~~~dll~~mL~~dP~~R~t---a~e~L~Hp~f~~~~~  277 (395)
                      .+.+|  ..+|..+.|||.++|. +|+.|..   ++++..||||.+..|
T Consensus       299 ~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  299 SLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             hcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            12233  4589999999999987 6999998   999999999988554

>KOG0032|consensus

Probab=100.00  E-value=1.8e-33  Score=266.04  Aligned_cols=164  Identities=26%  Similarity=0.324  Sum_probs=143.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC----CCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT----YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~----~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      .+++..+..++.||+.|+.|||+.||+||||||+|+|+...    +.+|++|||+|.....  ...+...|||+.|+|||
T Consensus       131 ~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~--~~~~~~~~Gtp~y~APE  208 (382)
T KOG0032|consen  131 HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP--GERLHTIVGTPEYVAPE  208 (382)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC--CceEeeecCCccccCch
Confidence            49999999999999999999999999999999999999743    4799999999998654  45677789999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.+ |+..+||||+||++|.|++|.+||.+.+....+..|...--                            .-..
T Consensus       209 vl~~~~-y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~----------------------------~f~~  259 (382)
T KOG0032|consen  209 VLGGRP-YGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF----------------------------DFTS  259 (382)
T ss_pred             hhcCCC-CCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC----------------------------CCCC
Confidence            998766 99999999999999999999999999998887776654211                            1122


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++..+..+.+|+..||..||.+|+||.++|+|||+..
T Consensus       260 ~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~  298 (382)
T KOG0032|consen  260 EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKS  298 (382)
T ss_pred             CCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence            455778999999999999999999999999999999975

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=4.1e-33  Score=258.54  Aligned_cols=160  Identities=21%  Similarity=0.217  Sum_probs=136.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      +.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....    .....+||+.|+|||++.
T Consensus        96 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~  171 (291)
T cd05612          96 GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----RTWTLCGTPEYLAPEVIQ  171 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC----CcccccCChhhcCHHHHc
Confidence            4578888889999999999999999999999999999999999999999999986532    223457899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|||||||++|+|++|..||.+.+....+..+...                                ...++
T Consensus       172 ~~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~--------------------------------~~~~~  218 (291)
T cd05612         172 SKG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG--------------------------------KLEFP  218 (291)
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------------------------CcCCC
Confidence            876 899999999999999999999999988776665555321                                11234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEG  275 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~  275 (395)
                      ...++.+.+||.+||..||.+|++     +++++.||||...
T Consensus       219 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         219 RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence            556888999999999999999995     9999999999763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG4717|consensus

Probab=99.98  E-value=2e-33  Score=260.40  Aligned_cols=166  Identities=27%  Similarity=0.373  Sum_probs=150.5

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      -++.+.|+-++.|++||+.|+.|+|+..+|||||||+||.+- .-|.|||.|||++..+.  +...+++.||+..|-|||
T Consensus       111 He~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~--PG~kL~TsCGSLAYSAPE  188 (864)
T KOG4717|consen  111 HEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ--PGKKLTTSCGSLAYSAPE  188 (864)
T ss_pred             hhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC--CcchhhcccchhhccCch
Confidence            356788888899999999999999999999999999998875 67899999999998776  346678889999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +++|..+.-+++||||||||+|.|++|++||+..++.+.|.+|++                                ..|
T Consensus       189 ILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImD--------------------------------CKY  236 (864)
T KOG4717|consen  189 ILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMD--------------------------------CKY  236 (864)
T ss_pred             hhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhc--------------------------------ccc
Confidence            999988556789999999999999999999999999999999965                                567


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR  276 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~  276 (395)
                      ..|..++.+++|||..||+.||.+|.|.+++..|+|++.+.
T Consensus       237 tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  237 TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD  277 (864)
T ss_pred             cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence            88899999999999999999999999999999999998743

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.98  E-value=7.7e-33  Score=257.93  Aligned_cols=195  Identities=29%  Similarity=0.437  Sum_probs=154.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++...... ........++..|+|||++
T Consensus        98 ~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~~PE~~  176 (301)
T cd07873          98 GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP-TKTYSNEVVTLWYRPPDIL  176 (301)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC-CCcccccceeecccCcHHH
Confidence            345677788899999999999999999999999999999999999999999999764322 2223445678999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|.+||.+.+..+++..+...++.+....|+................  ....+...
T Consensus       177 ~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  254 (301)
T cd07873         177 LGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKY--RADCLHNH  254 (301)
T ss_pred             hCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCcc--ccccHHhh
Confidence            8765588899999999999999999999999998899999999999888877765422211100000000  00111233


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ....++.+.+||.+||.+||.+|||+.++|+||||...
T Consensus       255 ~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         255 APRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             cCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            45678899999999999999999999999999999764

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0668|consensus

Probab=99.98  E-value=6.4e-33  Score=233.19  Aligned_cols=195  Identities=22%  Similarity=0.363  Sum_probs=149.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      -..|+.-.+++++.|++.||.|||++||+|||+||.|++||. ...++|+|+|+|....+  .....-.+.++.|--||+
T Consensus       126 y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp--~~eYnVRVASRyfKGPEL  203 (338)
T KOG0668|consen  126 YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--GKEYNVRVASRYFKGPEL  203 (338)
T ss_pred             hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCC--CceeeeeeehhhcCCchh
Confidence            356788999999999999999999999999999999999995 56799999999998764  334555688999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhh--hhhhh-hccccCCccc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGA--KCHML-RQTRKSQSLS  232 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~  232 (395)
                      +.....|+.+.|||||||+++.|+.. .|+|.|.+..+|+.+|..++|+...........-.  ..+.. -.......|.
T Consensus       204 LVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~  283 (338)
T KOG0668|consen  204 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWS  283 (338)
T ss_pred             eeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHH
Confidence            99888899999999999999999865 56778999999999999999975332221111000  00000 0001111222


Q ss_pred             hhhc--cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         233 SLYS--LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       233 ~~~~--~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .+..  ...-.++++.|||.++|.+|..+|+||.|++.||||..
T Consensus       284 ~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  284 RFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             HhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence            2221  11235799999999999999999999999999999964

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.98  E-value=5.6e-33  Score=262.51  Aligned_cols=170  Identities=24%  Similarity=0.251  Sum_probs=135.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.............+||+.|+|||++
T Consensus        99 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~  178 (332)
T cd05614          99 RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEII  178 (332)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHh
Confidence            35688889999999999999999999999999999999999999999999999986543323334456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++|||||||++|+|++|..||...........+...+                            ......+
T Consensus       179 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~----------------------------~~~~~~~  230 (332)
T cd05614         179 RGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRI----------------------------LKCDPPF  230 (332)
T ss_pred             cCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHH----------------------------hcCCCCC
Confidence            876557889999999999999999999997543322111111100                            0001123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      +...++.+.+||.+||..||.+|+     +++++++||||...
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         231 PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            456788999999999999999999     88999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0582|consensus

Probab=99.98  E-value=4.4e-33  Score=254.61  Aligned_cols=173  Identities=20%  Similarity=0.229  Sum_probs=137.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC---Ccccccccccccchhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK---AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~---~~~~~~~t~~y~aPEv  156 (395)
                      .|.|..++.++++++.||.|||++|.||||||+.||||+.+|.|||+|||.+..+...+..   .+..++||++|||||+
T Consensus       122 Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEv  201 (516)
T KOG0582|consen  122 GLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEV  201 (516)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHH
Confidence            4788899999999999999999999999999999999999999999999987665544322   2356799999999999


Q ss_pred             hh-cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LM-GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~-~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++ ....|+.++||||||++..||++|..||.--.+...|.  +.+-|.|+.-....                    ..+
T Consensus       202 l~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl--~tLqn~pp~~~t~~--------------------~~~  259 (516)
T KOG0582|consen  202 LMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL--LTLQNDPPTLLTSG--------------------LDK  259 (516)
T ss_pred             hhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH--HHhcCCCCCccccc--------------------CCh
Confidence            54 33349999999999999999999999998777655443  34445554221100                    001


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......+..|..|+..||+.||.+||||+++|.|+||..
T Consensus       260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~  298 (516)
T KOG0582|consen  260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK  298 (516)
T ss_pred             HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence            112334558999999999999999999999999999965

>KOG0603|consensus

Probab=99.98  E-value=3.5e-33  Score=266.23  Aligned_cols=150  Identities=25%  Similarity=0.348  Sum_probs=129.5

Q ss_pred             CCCchhhHHhhcCCCCccccCccccCCCCCceee-cCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcCCC
Q psy2865          84 RRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY-QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARH  162 (395)
Q Consensus        84 ~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~-~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~~  162 (395)
                      ..+..|+++|+.|+.|||..|||||||||+|||+ +..++++|+|||.++.....    .-..+-|..|.|||++...+ 
T Consensus       415 ~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----~~tp~~t~~y~APEvl~~~~-  489 (612)
T KOG0603|consen  415 SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----CDTPALTLQYVAPEVLAIQE-  489 (612)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh----hcccchhhcccChhhhccCC-
Confidence            6677899999999999999999999999999999 69999999999999976432    33457899999999998765 


Q ss_pred             CCccchHHhHHHHHHHHHcCCCCCCCCChH-hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCC
Q psy2865         163 YSAAVDVWSVGCIFAELLGRRILFQAQSPV-QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA  241 (395)
Q Consensus       163 ~~~~~DiWSlG~il~ell~g~~~f~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (395)
                      |+.++||||||+++|+|++|..||...... +++.+|    +.+                              .+...+
T Consensus       490 yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~------------------------------~~s~~v  535 (612)
T KOG0603|consen  490 YTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMP------------------------------KFSECV  535 (612)
T ss_pred             CCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCC------------------------------cccccc
Confidence            999999999999999999999999887665 333332    211                              222678


Q ss_pred             CHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       242 ~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      |..++|||.+||++||.+|+|+.+++.||||
T Consensus       536 S~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  536 SDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             CHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            9999999999999999999999999999999

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.98  E-value=4.3e-33  Score=257.61  Aligned_cols=166  Identities=18%  Similarity=0.269  Sum_probs=136.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.||+||||||+|||++.++.++|+|||++.....  .......+||..|+|||++.+
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~~~~g~~~y~aPE~~~~  175 (285)
T cd05631          98 GFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE--GETVRGRVGTVGYMAPEVINN  175 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC--CCeecCCCCCCCccCHhhhcC
Confidence            578888899999999999999999999999999999999999999999999986532  123345689999999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. |+.++||||+||++|+|++|.+||.+.........+...+..                            .....+.
T Consensus       176 ~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  226 (285)
T cd05631         176 EK-YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE----------------------------DQEEYSE  226 (285)
T ss_pred             CC-CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc----------------------------ccccCCc
Confidence            75 899999999999999999999999876643332222211100                            1123445


Q ss_pred             CCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGR  276 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~  276 (395)
                      ..+..+.+||.+||..||.+|+|     ++++++||||....
T Consensus       227 ~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence            67889999999999999999997     89999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.98  E-value=7.9e-33  Score=260.12  Aligned_cols=164  Identities=24%  Similarity=0.322  Sum_probs=138.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++...... .......+||+.|+|||++
T Consensus        90 ~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~  168 (320)
T cd05590          90 SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKTTSTFCGTPDYIAPEIL  168 (320)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCcccccccCccccCHHHH
Confidence            346888899999999999999999999999999999999999999999999998753221 2234456799999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|..||.+.+....+..|...                                ....
T Consensus       169 ~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  215 (320)
T cd05590         169 QEML-YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--------------------------------EVVY  215 (320)
T ss_pred             cCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--------------------------------CCCC
Confidence            8765 899999999999999999999999988877666655321                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH------HHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV------NSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta------~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|+++      .+++.||||...
T Consensus       216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence            34577899999999999999999998      999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=4.3e-33  Score=261.02  Aligned_cols=164  Identities=23%  Similarity=0.353  Sum_probs=137.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||+++..... .......+||+.|+|||++
T Consensus        87 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~  165 (312)
T cd05585          87 EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTFCGTPEYLAPELL  165 (312)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCccccccCCcccCCHHHH
Confidence            346888888999999999999999999999999999999999999999999999853321 2234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++||||+||++|+|++|.+||.+.+....+..+..                                ....+
T Consensus       166 ~~~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~--------------------------------~~~~~  212 (312)
T cd05585         166 LGHG-YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ--------------------------------EPLRF  212 (312)
T ss_pred             cCCC-CCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc--------------------------------CCCCC
Confidence            8875 89999999999999999999999988776555444421                                11234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc---CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI---SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~---ta~e~L~Hp~f~~~  275 (395)
                      +...++.+.+||.+||..||.+|+   +|.++|.||||...
T Consensus       213 ~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         213 PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            566788999999999999999997   58999999999863

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.98  E-value=2.5e-32  Score=258.56  Aligned_cols=195  Identities=34%  Similarity=0.575  Sum_probs=154.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++........  ......++|+.|+|||+
T Consensus       101 ~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (336)
T cd07849         101 QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEI  180 (336)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHH
Confidence            4688888999999999999999999999999999999999999999999999986543211  12234578999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...++.++||||+||++|+|++|.+||.+.+...++..+...++.++.+.+.................. .......
T Consensus       181 ~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  259 (336)
T cd07849         181 MLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFK-PKVPWNK  259 (336)
T ss_pred             hhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcC-CcccHHH
Confidence            876555899999999999999999999999999888899999999999888777654322211111111100 0111122


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..+..+.+||.+||..||++|||+.+++.||||..
T Consensus       260 ~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~  297 (336)
T cd07849         260 LFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ  297 (336)
T ss_pred             HhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence            33456888999999999999999999999999999975

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0580|consensus

Probab=99.98  E-value=7.1e-33  Score=234.46  Aligned_cols=163  Identities=21%  Similarity=0.307  Sum_probs=147.2

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ++...|++..+..|+.|++.|+.|+|..+||||||||+|+|++..+.+||+|||.+....   .....+.|||.-|.+||
T Consensus       116 ~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p---~~kR~tlcgt~dyl~pE  192 (281)
T KOG0580|consen  116 GRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SNKRKTLCGTLDYLPPE  192 (281)
T ss_pred             cccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC---CCCceeeecccccCCHh
Confidence            356789999999999999999999999999999999999999999999999999997643   33455679999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+.+.. ++..+|+|++|+++||++.|.+||...+..+.+..|.++                                ..
T Consensus       193 mv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~--------------------------------~~  239 (281)
T KOG0580|consen  193 MVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV--------------------------------DL  239 (281)
T ss_pred             hcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc--------------------------------cc
Confidence            999887 899999999999999999999999999988888888653                                23


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .++..++..+.|||.+||..+|.+|++..|++.|||+..
T Consensus       240 ~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  240 KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             cCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence            456788999999999999999999999999999999854

>KOG0595|consensus

Probab=99.98  E-value=2.6e-33  Score=253.94  Aligned_cols=165  Identities=24%  Similarity=0.372  Sum_probs=139.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC------CCeEEeeCCcccccCCCCCCCccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT------YSSKICDFGLARVEEPDPNKAMTQEVVTQYYR  152 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~------~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~  152 (395)
                      +.++|.+++.++.||+.|+++||.++||||||||+||||+..      -.+||+|||+|+.+..  .....+.||++.||
T Consensus       104 ~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~--~~~a~tlcGSplYM  181 (429)
T KOG0595|consen  104 GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQP--GSMAETLCGSPLYM  181 (429)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCc--hhHHHHhhCCcccc
Confidence            389999999999999999999999999999999999999864      4689999999998763  34456679999999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ||||+.... |+.++|+||+|+|+|+|++|.+||...+..+.+..|...-..                            
T Consensus       182 APEV~~~~~-YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~----------------------------  232 (429)
T KOG0595|consen  182 APEVIMSQQ-YDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI----------------------------  232 (429)
T ss_pred             CHHHHHhcc-ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc----------------------------
Confidence            999998765 999999999999999999999999999998888766431110                            


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                       ...++...+....+|+..+|..+|..|.+..+-+.|+++...
T Consensus       233 -~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~  274 (429)
T KOG0595|consen  233 -VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN  274 (429)
T ss_pred             -cCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence             011223445566799999999999999999999999998764

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.98  E-value=1.5e-32  Score=253.61  Aligned_cols=190  Identities=29%  Similarity=0.411  Sum_probs=150.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||..||+||||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus        94 ~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  172 (284)
T cd07839          94 GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP-VRCYSAEVVTLWYRPPDVLF  172 (284)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC-CCCcCCCccccCCcChHHHh
Confidence            45788899999999999999999999999999999999999999999999999865432 22344557889999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCC-CCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~-f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +...++.++||||+||++|+|++|..| |.+.+....+..+...++.+....|+...........   ............
T Consensus       173 ~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  249 (284)
T cd07839         173 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY---PMYPATTSLVNV  249 (284)
T ss_pred             CCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc---CCCCCcchhhhh
Confidence            766579999999999999999987766 6677777888888888888887766554322211100   000011112233


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .+..+..+.+||.+||..||.+|||++++|.||||
T Consensus       250 ~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         250 VPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             cccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            45678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.98  E-value=5e-33  Score=263.36  Aligned_cols=161  Identities=22%  Similarity=0.247  Sum_probs=138.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|.....    .....+||+.|+|||++
T Consensus       125 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~----~~~~~~gt~~y~aPE~~  200 (340)
T PTZ00426        125 NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT----RTYTLCGTPEYIAPEIL  200 (340)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC----CcceecCChhhcCHHHH
Confidence            35688888899999999999999999999999999999999999999999999986532    23456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|.+||.+.+.......+...                                ...+
T Consensus       201 ~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  247 (340)
T PTZ00426        201 LNVG-HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG--------------------------------IIYF  247 (340)
T ss_pred             hCCC-CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC--------------------------------CCCC
Confidence            8876 899999999999999999999999988776655555321                                1224


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|+     |++++++||||.+.
T Consensus       248 p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        248 PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            456788899999999999999996     89999999999763

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=5.7e-32  Score=256.77  Aligned_cols=229  Identities=34%  Similarity=0.501  Sum_probs=176.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.||+||||+|+||+++.++.++|+|||++.....    ....+.+|..|+|||++.
T Consensus       113 ~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~  188 (343)
T cd07851         113 QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIML  188 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc----cccCCcccccccCHHHHh
Confidence            4588888999999999999999999999999999999999999999999999986532    245567899999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+....+..+...++.+++..+................... ...+....
T Consensus       189 ~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  267 (343)
T cd07851         189 NWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMP-KKDFKEVF  267 (343)
T ss_pred             CCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccC-CCCHHHHh
Confidence            65457899999999999999999999999999888999999999988887766553222221111111110 01122233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSA  318 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (395)
                      ...+..+.+||.+||..||.+|||+.++|.||||.....             +                     ...+ .
T Consensus       268 ~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~-------------~---------------------~~~~-~  312 (343)
T cd07851         268 SGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD-------------P---------------------EDEP-V  312 (343)
T ss_pred             ccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC-------------C---------------------cccc-c
Confidence            456889999999999999999999999999999975210             0                     0111 1


Q ss_pred             CCCCCchhHHhhhhhhHHhhHHHHHHHhh
Q psy2865         319 PQPFDDTWERKLTSVQQVKEEMHKFIAEQ  347 (395)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~i~~~I~~~  347 (395)
                      ...++..+.........|++.++..|..+
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (343)
T cd07851         313 APPYDQSFESRDLTVDEWKELVYKEIMNF  341 (343)
T ss_pred             ccccCcchhhhhcCHHHHHHHhHHHHHhc
Confidence            34566667777778888888888887665

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=3.8e-32  Score=258.98  Aligned_cols=191  Identities=34%  Similarity=0.542  Sum_probs=152.3

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      +++..+..++.|++.||.|||..||+||||||+||+++.++.++|+|||+++.....  .......+|..|+|||++.+.
T Consensus       115 l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~  192 (353)
T cd07850         115 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGM  192 (353)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC--CCCCCCcccccccCHHHHhCC
Confidence            777888889999999999999999999999999999999999999999999875432  223445788999999999887


Q ss_pred             CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc-cCCccchhh----
Q psy2865         161 RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR-KSQSLSSLY----  235 (395)
Q Consensus       161 ~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----  235 (395)
                      . ++.++||||+||++|+|++|..||.+.+...++..+...+|.|+.+.+................ ....+....    
T Consensus       193 ~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (353)
T cd07850         193 G-YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVL  271 (353)
T ss_pred             C-CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccc
Confidence            6 8999999999999999999999999999999999999999999887766554332222211111 000111100    


Q ss_pred             ------ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 ------SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ------~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                            ......+..+.+||.+||.+||++|||+.++|.||||..
T Consensus       272 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         272 FPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             cCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence                  002234667899999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=6.1e-33  Score=261.88  Aligned_cols=161  Identities=21%  Similarity=0.259  Sum_probs=136.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....    .....+||+.|+|||++
T Consensus       112 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~  187 (329)
T PTZ00263        112 AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD----RTFTLCGTPEYLAPEVI  187 (329)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC----CcceecCChhhcCHHHH
Confidence            34678888899999999999999999999999999999999999999999999987532    22345899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|..||.+.+....+..+...                                ...+
T Consensus       188 ~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  234 (329)
T PTZ00263        188 QSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--------------------------------RLKF  234 (329)
T ss_pred             cCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--------------------------------CcCC
Confidence            8876 899999999999999999999999888766655554321                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|++     +.+++.||||...
T Consensus       235 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        235 PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            4456788999999999999999997     7999999999764

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=7.4e-33  Score=261.14  Aligned_cols=164  Identities=26%  Similarity=0.330  Sum_probs=137.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... .......+||+.|+|||++
T Consensus        89 ~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~  167 (328)
T cd05593          89 ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTFCGTPEYLAPEVL  167 (328)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccccccCCcCccChhhh
Confidence            346888889999999999999999999999999999999999999999999998753221 2233456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|..||.+.+....+..+..                                ....+
T Consensus       168 ~~~~-~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--------------------------------~~~~~  214 (328)
T cd05593         168 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--------------------------------EDIKF  214 (328)
T ss_pred             cCCC-CCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc--------------------------------CCccC
Confidence            8765 89999999999999999999999988766554444321                                11234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      +...++.+.+||.+||..||.+|+     ++.++++||||...
T Consensus       215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         215 PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            556788999999999999999997     89999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=8.6e-33  Score=260.47  Aligned_cols=164  Identities=26%  Similarity=0.319  Sum_probs=137.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+ .||+||||||+|||++.++.+||+|||++...... .......+||+.|+|||+
T Consensus        89 ~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~  167 (325)
T cd05594          89 ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTFCGTPEYLAPEV  167 (325)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-CcccccccCCcccCCHHH
Confidence            3468888999999999999999997 79999999999999999999999999998753221 223345679999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|||||||++|+|++|..||.+.+....+..+..                                ....
T Consensus       168 ~~~~~-~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~--------------------------------~~~~  214 (325)
T cd05594         168 LEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--------------------------------EEIR  214 (325)
T ss_pred             HccCC-CCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc--------------------------------CCCC
Confidence            98775 89999999999999999999999988776555544421                                1122


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      ++...++.+.+||.+||..||.+|+     ++.++++||||...
T Consensus       215 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         215 FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence            3456788999999999999999997     99999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=5e-32  Score=256.21  Aligned_cols=196  Identities=34%  Similarity=0.548  Sum_probs=156.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||..||+||||+|+||+++.++.+||+|||++........   ...+..+++.+|+||
T Consensus       101 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (334)
T cd07855         101 DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAP  180 (334)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccCh
Confidence            34588999999999999999999999999999999999999999999999999986543221   122345789999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+...++.++||||+||++|+|++|.+||.+.+...++..+...+|.|+...+.................... ..+
T Consensus       181 E~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  259 (334)
T cd07855         181 ELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQP-VPW  259 (334)
T ss_pred             HHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCC-CCH
Confidence            9987655589999999999999999999999999999999999999999998887665432221111111111111 111


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+.+..+..+.+||.+||..+|++|||+++++.||||..
T Consensus       260 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         260 SKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ  299 (334)
T ss_pred             HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence            2234567899999999999999999999999999999975

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=1.2e-32  Score=258.92  Aligned_cols=164  Identities=23%  Similarity=0.295  Sum_probs=138.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++
T Consensus        90 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (321)
T cd05591          90 SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL-NGVTTTTFCGTPDYIAPEIL  168 (321)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceeccc-CCccccccccCccccCHHHH
Confidence            34678888899999999999999999999999999999999999999999999875332 12234456799999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++||||+||++|+|++|.+||.+.+....+..|...                                ....
T Consensus       169 ~~~~-~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  215 (321)
T cd05591         169 QELE-YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD--------------------------------DVLY  215 (321)
T ss_pred             cCCC-CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            8765 899999999999999999999999998877766665421                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-------CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-------SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-------ta~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|+       ++.+++.||||...
T Consensus       216 p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         216 PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence            345678999999999999999999       99999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.97  E-value=3.2e-32  Score=254.69  Aligned_cols=194  Identities=31%  Similarity=0.429  Sum_probs=154.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||+.|++||||+|+||+++.++.++|+|||++....... ...+...++..|+|||++.
T Consensus       103 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  181 (309)
T cd07845         103 TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA-KPMTPKVVTLWYRAPELLL  181 (309)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc-CCCCcccccccccChhhhc
Confidence            457888889999999999999999999999999999999999999999999998754321 2334445688899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+++..+...+|.+....|+.............  .......+....
T Consensus       182 ~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  259 (309)
T cd07845         182 GCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTL--PKQPYNNLKHKF  259 (309)
T ss_pred             CCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccc--cCCCCCchHHhc
Confidence            765589999999999999999999999999999999999999999888776654422111000000  000111112223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ...++.+.+||.+||.+||++|||+.++|.||||...
T Consensus       260 ~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         260 PWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             cccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence            4468899999999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=9.1e-32  Score=255.26  Aligned_cols=191  Identities=33%  Similarity=0.502  Sum_probs=153.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++....    ......++|..|+|||++.
T Consensus       112 ~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~----~~~~~~~~~~~y~aPE~~~  187 (342)
T cd07879         112 HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPEVIL  187 (342)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC----CCCCCceeeecccChhhhc
Confidence            357888889999999999999999999999999999999999999999999997642    2234567889999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|||||||++|+|++|..||.+.+....+..+....|.+.+..+.................. ....+....
T Consensus       188 ~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  266 (342)
T cd07879         188 NWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKY-PRKDFSTLF  266 (342)
T ss_pred             CccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCc-ccchHHHHh
Confidence            7545889999999999999999999999999888889999999998888776554322111111100000 011122233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +..+..+.+||.+||..||.+|||++++|.||||..
T Consensus       267 ~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~  302 (342)
T cd07879         267 PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDS  302 (342)
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence            567888999999999999999999999999999976

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0201|consensus

Probab=99.97  E-value=6.6e-33  Score=253.17  Aligned_cols=164  Identities=20%  Similarity=0.214  Sum_probs=138.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..-+.+..+..++++++.|+.|||..+.+|||||+.|||+..+|.|||+|||.|..+..+.... .+++||++||||||+
T Consensus       105 ~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr-~tfvGTPfwMAPEVI  183 (467)
T KOG0201|consen  105 GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR-KTFVGTPFWMAPEVI  183 (467)
T ss_pred             CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc-ccccccccccchhhh
Confidence            3445899999999999999999999999999999999999999999999999998876544433 678999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.+ |+.++||||||++++||++|.||+....++..+..|-+                           ..    ...+
T Consensus       184 ~~~~-Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk---------------------------~~----PP~L  231 (467)
T KOG0201|consen  184 KQSG-YDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK---------------------------SA----PPRL  231 (467)
T ss_pred             cccc-ccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC---------------------------CC----CCcc
Confidence            9765 99999999999999999999999987766433333321                           00    0112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....++.+.+|+..||..||+.||||.++|.|+|+..
T Consensus       232 ~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  232 DGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             ccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence            2367889999999999999999999999999999854

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=1.5e-32  Score=257.73  Aligned_cols=164  Identities=25%  Similarity=0.297  Sum_probs=136.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||+++.... ........+||+.|+|||++
T Consensus        90 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (316)
T cd05620          90 KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF-GDNRASTFCGTPDYIAPEIL  168 (316)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc-CCCceeccCCCcCccCHHHH
Confidence            35678888899999999999999999999999999999999999999999999875322 12334556899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|..||.+.+....+..+...                                ...+
T Consensus       169 ~~~~-~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--------------------------------~~~~  215 (316)
T cd05620         169 QGLK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--------------------------------TPHY  215 (316)
T ss_pred             cCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            8876 899999999999999999999999988766555444211                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH-HHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV-NSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta-~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|+|+ +++++||||...
T Consensus       216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         216 PRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence            34567889999999999999999997 588899999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=1.6e-32  Score=258.54  Aligned_cols=164  Identities=24%  Similarity=0.252  Sum_probs=138.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++
T Consensus        95 ~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~  173 (324)
T cd05587          95 VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF-GGKTTRTFCGTPDYIAPEII  173 (324)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC-CCCceeeecCCccccChhhh
Confidence            34578888899999999999999999999999999999999999999999999875322 12233456799999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|.+||.+.+..+.+..+...                                ...+
T Consensus       174 ~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  220 (324)
T cd05587         174 AYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH--------------------------------NVSY  220 (324)
T ss_pred             cCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            8876 899999999999999999999999988876666655431                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH-----HHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV-----NSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta-----~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|+++     .+++.||||...
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         221 PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            45678899999999999999999976     899999999764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=5.4e-32  Score=254.91  Aligned_cols=163  Identities=19%  Similarity=0.239  Sum_probs=138.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++.
T Consensus        96 ~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~-~~~~~~~~~g~~~y~aPE~~~  174 (324)
T cd05589          96 DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG-FGDRTSTFCGTPEFLAPEVLT  174 (324)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC-CCCcccccccCccccCHhHhc
Confidence            4688899999999999999999999999999999999999999999999999875322 122344568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|||||||++|+|++|..||.+.+..+.+..+...                                ....+
T Consensus       175 ~~~-~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--------------------------------~~~~p  221 (324)
T cd05589         175 ETS-YTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND--------------------------------EVRYP  221 (324)
T ss_pred             CCC-CCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------------------------CCCCC
Confidence            865 899999999999999999999999988876666555321                                11234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      ...+..+.+||.+||..||.+||     ++.++++||||...
T Consensus       222 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         222 RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            55788899999999999999999     79999999999763

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.4e-32  Score=263.82  Aligned_cols=196  Identities=17%  Similarity=0.162  Sum_probs=143.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||..||+||||||+|||++.++.++|+|||+|+....... ......+||+.|+|||+
T Consensus       179 ~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~  258 (392)
T PHA03207        179 SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPEL  258 (392)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhH
Confidence            45688889999999999999999999999999999999999999999999999986543221 22335679999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCC---hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhh---hhccccCCc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS---PVQQLGLITDLLGTPTPEEMRHACDGAKCHM---LRQTRKSQS  230 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~---~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~  230 (395)
                      +.+.. |+.++|||||||++|+|++|..||.+..   ...++..|...++..+.+.............   .........
T Consensus       259 ~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (392)
T PHA03207        259 LALDP-YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYT  337 (392)
T ss_pred             hcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCcc
Confidence            98775 8999999999999999999999997754   3566777777666554432211100000000   000000000


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      .... ......+.++.+||.+||.+||.+||||.++|.||||...
T Consensus       338 ~~~~-~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        338 IPPV-IRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             ccch-hhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence            0000 0112346788999999999999999999999999999763

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=2e-32  Score=257.72  Aligned_cols=164  Identities=25%  Similarity=0.305  Sum_probs=138.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++
T Consensus        89 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~  167 (323)
T cd05595          89 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKTFCGTPEYLAPEVL  167 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccC-CCCccccccCCcCcCCcccc
Confidence            45688999999999999999999999999999999999999999999999999875322 12233456799999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|..||.+.+....+..+..                                ....+
T Consensus       168 ~~~~-~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~--------------------------------~~~~~  214 (323)
T cd05595         168 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--------------------------------EEIRF  214 (323)
T ss_pred             cCCC-CCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc--------------------------------CCCCC
Confidence            8775 89999999999999999999999988776655554431                                11234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      +...++.+.+||.+||..||.+|+     ++.++++||||...
T Consensus       215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence            456788999999999999999998     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.97  E-value=5.5e-32  Score=249.96  Aligned_cols=193  Identities=32%  Similarity=0.507  Sum_probs=156.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++..............+++..|+|||++.
T Consensus        94 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07832          94 RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY  173 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeee
Confidence            45788888999999999999999999999999999999999999999999999876443222344567899999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.++|.+.+....+..+...++.+....|+................  ....+....
T Consensus       174 ~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  251 (286)
T cd07832         174 GARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPES--KPIPLEEIF  251 (286)
T ss_pred             ccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCC--CcchHHHhC
Confidence            766578999999999999999999999999999999999999999998887776533222111111000  011122344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      +..+..+.+||.+||..||.+|||++++|.||||.
T Consensus       252 ~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         252 PDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            56678999999999999999999999999999994

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=5e-32  Score=250.18  Aligned_cols=190  Identities=34%  Similarity=0.447  Sum_probs=149.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++...... .......+++..|+|||++.
T Consensus        96 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  174 (285)
T cd07861          96 QYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-VRVYTHEVVTLWYRAPEVLL  174 (285)
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC-cccccCCcccccccChHHhc
Confidence            45788888999999999999999999999999999999999999999999999765432 22234457789999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+...++.+....|...........   ..............
T Consensus       175 ~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  251 (285)
T cd07861         175 GSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN---TFPKWKKGSLRSAV  251 (285)
T ss_pred             CCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh---hccccCcchhHHhc
Confidence            765578999999999999999999999999888888888888788777666654321111000   00000011112234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...++++.+||.+||..||.+|||+.+++.||||
T Consensus       252 ~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         252 KNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            4578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.6e-32  Score=269.07  Aligned_cols=188  Identities=20%  Similarity=0.157  Sum_probs=135.2

Q ss_pred             CCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcCCCC
Q psy2865          84 RRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHY  163 (395)
Q Consensus        84 ~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~~~  163 (395)
                      ..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+.+...........+||..|+|||++.+.. |
T Consensus       267 ~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~  345 (501)
T PHA03210        267 KQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG-Y  345 (501)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCC-C
Confidence            345678999999999999999999999999999999999999999999876543333334568999999999998876 8


Q ss_pred             CccchHHhHHHHHHHHHcCCCCCCC---CChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh--ccccCCccchhhccC
Q psy2865         164 SAAVDVWSVGCIFAELLGRRILFQA---QSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR--QTRKSQSLSSLYSLS  238 (395)
Q Consensus       164 ~~~~DiWSlG~il~ell~g~~~f~~---~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  238 (395)
                      +.++|||||||++|||++|..++.+   .....++..++..++.+..++ +........++..  .......+..+.. .
T Consensus       346 ~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~i~~~~~~~~~~~~~~~~~-~  423 (501)
T PHA03210        346 CEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEF-PDPPCKLFDYIDSAEIDHAGHSVPPLIR-N  423 (501)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhc-CCcHHHHHHHhhhhhcccCccchhhHHH-h
Confidence            9999999999999999998755432   244566666666665443321 1110000000000  0000011111111 1


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.++|.+||.+||.+||||.|+|.||||..
T Consensus       424 ~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~  459 (501)
T PHA03210        424 LGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSA  459 (501)
T ss_pred             cCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence            235678899999999999999999999999999975

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=3.2e-32  Score=256.35  Aligned_cols=164  Identities=23%  Similarity=0.254  Sum_probs=137.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++
T Consensus        90 ~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (323)
T cd05575          90 ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE-HSKTTSTFCGTPEYLAPEVL  168 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc-CCCccccccCChhhcChhhh
Confidence            45678888889999999999999999999999999999999999999999999875322 22334456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|.+||.+.+..+.+..+...                                ...+
T Consensus       169 ~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  215 (323)
T cd05575         169 RKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK--------------------------------PLRL  215 (323)
T ss_pred             cCCC-CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            8875 899999999999999999999999987766655554321                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH----HHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV----NSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta----~e~L~Hp~f~~~  275 (395)
                      ++..+..+.+||.+||..||.+|+++    .+++.||||...
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         216 KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence            45668899999999999999999987    699999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=2.7e-32  Score=256.90  Aligned_cols=164  Identities=21%  Similarity=0.238  Sum_probs=139.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... .......+||+.|+|||++
T Consensus        95 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~  173 (323)
T cd05616          95 VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-GVTTKTFCGTPDYIAPEII  173 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC-CCccccCCCChhhcCHHHh
Confidence            356888889999999999999999999999999999999999999999999999753321 1233456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|..||.+.+....+..|...                                ...+
T Consensus       174 ~~~~-~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  220 (323)
T cd05616         174 AYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--------------------------------NVAY  220 (323)
T ss_pred             cCCC-CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            8876 899999999999999999999999988877766665431                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~  275 (395)
                      +...+..+.+|+.+||..||.+|++     ..+++.||||...
T Consensus       221 p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         221 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            4567889999999999999999997     4899999999764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=2.9e-32  Score=256.66  Aligned_cols=163  Identities=27%  Similarity=0.345  Sum_probs=137.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... .......+||+.|+|||++
T Consensus        94 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~  172 (323)
T cd05584          94 EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE-GTVTHTFCGTIEYMAPEIL  172 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-CCcccccCCCccccChhhc
Confidence            455777888889999999999999999999999999999999999999999998753321 2223445799999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|.+||.+.+....+..+..                                ....+
T Consensus       173 ~~~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~--------------------------------~~~~~  219 (323)
T cd05584         173 MRSG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK--------------------------------GKLNL  219 (323)
T ss_pred             cCCC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc--------------------------------CCCCC
Confidence            8875 89999999999999999999999998876665555432                                11234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~  274 (395)
                      +...++.+.+||.+||..||++|+     ++++++.||||..
T Consensus       220 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         220 PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence            566788999999999999999999     8999999999975

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=5.3e-32  Score=258.96  Aligned_cols=170  Identities=18%  Similarity=0.268  Sum_probs=135.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-------------------
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-------------------  138 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-------------------  138 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+......                   
T Consensus        95 ~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (363)
T cd05628          95 KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQ  174 (363)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccccccc
Confidence            3568899999999999999999999999999999999999999999999999987542110                   


Q ss_pred             ---------------CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcC
Q psy2865         139 ---------------NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLG  203 (395)
Q Consensus       139 ---------------~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g  203 (395)
                                     .......+||+.|+|||++.+.. |+.++|||||||++|||++|.+||.+.+..+.+..|.....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~  253 (363)
T cd05628         175 NMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKE  253 (363)
T ss_pred             ccccccccchhhhccccccccccCCccccCHHHHcCCC-CCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcC
Confidence                           00113458999999999998876 89999999999999999999999998887777666653211


Q ss_pred             CCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCC---CcCHHHHHcCCccccCcc
Q psy2865         204 TPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTK---RISVNSALCHPYLDEGRL  277 (395)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~---R~ta~e~L~Hp~f~~~~~  277 (395)
                      ..                            .+.-....++.+.+||.+|+. +|..   ||+++++++||||.+..+
T Consensus       254 ~~----------------------------~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~  301 (363)
T cd05628         254 TL----------------------------IFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDW  301 (363)
T ss_pred             cc----------------------------cCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCH
Confidence            10                            001112467899999999876 5554   579999999999987543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=4.7e-32  Score=254.40  Aligned_cols=163  Identities=25%  Similarity=0.308  Sum_probs=136.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|...... .......+||+.|+|||++.
T Consensus        91 ~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~  169 (316)
T cd05592          91 GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG-EGKASTFCGTPDYIAPEILK  169 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC-CCccccccCCccccCHHHHc
Confidence            46888889999999999999999999999999999999999999999999999754321 23344568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|..||.+.+....+..+...                                ...++
T Consensus       170 ~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~~  216 (316)
T cd05592         170 GQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--------------------------------RPHFP  216 (316)
T ss_pred             CCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------------------------CCCCC
Confidence            876 899999999999999999999999988776655554321                                11233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCH-HHHHcCCccccC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISV-NSALCHPYLDEG  275 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta-~e~L~Hp~f~~~  275 (395)
                      ...+..+.+||.+||..||.+|+++ .+++.||||...
T Consensus       217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         217 RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence            4567889999999999999999986 588899999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG4279|consensus

Probab=99.97  E-value=2.8e-32  Score=260.42  Aligned_cols=164  Identities=23%  Similarity=0.312  Sum_probs=133.2

Q ss_pred             cCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh-c
Q psy2865          82 SSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM-G  159 (395)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~-~  159 (395)
                      .|.++.+|..||++||.|||...|||||||-+||||+ -.|.+||.|||-++.+.. .+....++.||..|||||+|- |
T Consensus       673 NEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TETFTGTLQYMAPEvIDqG  751 (1226)
T KOG4279|consen  673 NESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTETFTGTLQYMAPEVIDQG  751 (1226)
T ss_pred             chhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc-CCccccccccchhhhChHhhccC
Confidence            5788999999999999999999999999999999998 589999999998876542 334556789999999999994 5


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .+.|+.++|||||||++.||+||+|||...-...  +.|.++ |.                          +....++|.
T Consensus       752 ~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--AAMFkV-Gm--------------------------yKvHP~iPe  802 (1226)
T KOG4279|consen  752 PRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--AAMFKV-GM--------------------------YKVHPPIPE  802 (1226)
T ss_pred             CcCCCchhhhhhccceeEeeccCCCCeeecCChh--Hhhhhh-cc--------------------------eecCCCCcH
Confidence            5569999999999999999999999996432211  111110 10                          111224566


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..+..+..||.+|+..||.+||+|.++|+.||+..+
T Consensus       803 elsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            778899999999999999999999999999999765

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.97  E-value=6.5e-32  Score=258.76  Aligned_cols=169  Identities=21%  Similarity=0.273  Sum_probs=138.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..............+||+.|+|||++.+
T Consensus       138 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  217 (370)
T cd05596         138 DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhcc
Confidence            57788888999999999999999999999999999999999999999999998754332223345689999999999875


Q ss_pred             CC---CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         160 AR---HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       160 ~~---~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      ..   .++.++|||||||++|+|++|.+||.+.+....+..|.......                            .+.
T Consensus       218 ~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~----------------------------~~~  269 (370)
T cd05596         218 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSL----------------------------TFP  269 (370)
T ss_pred             CCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcC----------------------------CCC
Confidence            42   37889999999999999999999999988776666654311100                            011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCC--CcCHHHHHcCCccccCc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTK--RISVNSALCHPYLDEGR  276 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~--R~ta~e~L~Hp~f~~~~  276 (395)
                      .....+..+.+||.+||..+|.+  |+|+.++++||||....
T Consensus       270 ~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~  311 (370)
T cd05596         270 DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQ  311 (370)
T ss_pred             CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCC
Confidence            12346889999999999999988  99999999999998643

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=1.3e-31  Score=256.53  Aligned_cols=168  Identities=21%  Similarity=0.252  Sum_probs=135.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|..............+||+.|+|||++.+
T Consensus       138 ~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  217 (370)
T cd05621         138 DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhc
Confidence            47788889999999999999999999999999999999999999999999998754322223345689999999999976


Q ss_pred             CC---CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         160 AR---HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       160 ~~---~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+   .++.++||||+||++|+|++|.+||.+.+....+..|........                            ..
T Consensus       218 ~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------~p  269 (370)
T cd05621         218 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN----------------------------FP  269 (370)
T ss_pred             cCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC----------------------------CC
Confidence            42   378899999999999999999999998887776666653211100                            01


Q ss_pred             cCCCCCHHHHHHHHHccccCCCC--CcCHHHHHcCCccccC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTK--RISVNSALCHPYLDEG  275 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~--R~ta~e~L~Hp~f~~~  275 (395)
                      .....+..+.+||..||..++.+  |+|+.++++||||...
T Consensus       270 ~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         270 EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            11246788999999999855544  8899999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=1.8e-31  Score=252.21  Aligned_cols=196  Identities=36%  Similarity=0.526  Sum_probs=155.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||..||+||||||+||+++.++.++|+|||++........   ......++|..|+||
T Consensus        99 ~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aP  178 (332)
T cd07857          99 GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAP  178 (332)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCc
Confidence            35678888999999999999999999999999999999999999999999999986543211   123345789999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+...++.++||||+||++|+|++|.+||.+.+....+..+...+|.++.+.+.................. ....+
T Consensus       179 E~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  257 (332)
T cd07857         179 EIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNI-PKKPF  257 (332)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhcccc-CCcch
Confidence            99876545899999999999999999999999999999999999999999988776655332211111111000 01112


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+..+..+.+||.+||..||.+|||+.+++.||||..
T Consensus       258 ~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~  297 (332)
T cd07857         258 ESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI  297 (332)
T ss_pred             HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence            2234556889999999999999999999999999999975

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0611|consensus

Probab=99.97  E-value=2.6e-32  Score=246.51  Aligned_cols=162  Identities=20%  Similarity=0.301  Sum_probs=143.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .++|+|+.++++++||+.|+.|+|.++++|||||.+|||+|.++.+||+|||++..+..  ...++++||++.|.+||++
T Consensus       147 r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~--~kfLqTFCGSPLYASPEIv  224 (668)
T KOG0611|consen  147 RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD--KKFLQTFCGSPLYASPEIV  224 (668)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc--ccHHHHhcCCcccCCcccc
Confidence            46799999999999999999999999999999999999999999999999999988753  4567889999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .|.++-++.+|.||||+++|.|+.|..||.|.+....+.+|...                                -| .
T Consensus       225 NG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G--------------------------------aY-r  271 (668)
T KOG0611|consen  225 NGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG--------------------------------AY-R  271 (668)
T ss_pred             CCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc--------------------------------cc-c
Confidence            99986688999999999999999999999999987777766431                                11 1


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .+..+.++.-||+.||..||++|.|..++-.|=|+..
T Consensus       272 EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw  308 (668)
T KOG0611|consen  272 EPETPSDASGLIRWMLMVNPERRATIEDIASHWWVNW  308 (668)
T ss_pred             CCCCCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence            2445567889999999999999999999999988764

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.4e-32  Score=258.85  Aligned_cols=195  Identities=18%  Similarity=0.181  Sum_probs=135.9

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +...+++..+..++.||+.||.|||..||+||||||+|||++.++.++|+|||+++....  ........||..|+|||+
T Consensus       150 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~--~~~~~~~~gt~~y~aPE~  227 (357)
T PHA03209        150 RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV--APAFLGLAGTVETNAPEV  227 (357)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc--CcccccccccccccCCee
Confidence            345678888999999999999999999999999999999999999999999999975332  123345678999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCC---------hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc-c
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGR-RILFQAQS---------PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ-T  225 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~---------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~  225 (395)
                      +.+.. |+.++|||||||++|||+++ .++|....         ...++..+...+|..+..+............... .
T Consensus       228 ~~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (357)
T PHA03209        228 LARDK-YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYAS  306 (357)
T ss_pred             cCCCC-CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcc
Confidence            98876 89999999999999999974 55554422         1234444555555443322110000000000000 0


Q ss_pred             ccCCccchh-hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         226 RKSQSLSSL-YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       226 ~~~~~~~~~-~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......... .......+..+.+||.+||.+||.+||||.|+|+||||..
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        307 LERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             cCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            000000000 0011245677889999999999999999999999999964

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=1.3e-31  Score=257.81  Aligned_cols=169  Identities=22%  Similarity=0.252  Sum_probs=132.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-------------------
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-------------------  138 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-------------------  138 (395)
                      ...+++..++.++.||+.||.|||..||+||||||+|||++.++.+||+|||++.......                   
T Consensus        95 ~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (381)
T cd05626          95 MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPS  174 (381)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcc
Confidence            3468888899999999999999999999999999999999999999999999976421100                   


Q ss_pred             ---------------------------CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh
Q psy2865         139 ---------------------------NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP  191 (395)
Q Consensus       139 ---------------------------~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~  191 (395)
                                                 .......+||+.|+|||++.+.. |+.++|||||||++|||++|.+||.+.+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~Pf~~~~~  253 (381)
T cd05626         175 DLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG-YTQLCDWWSVGVILFEMLVGQPPFLAPTP  253 (381)
T ss_pred             cccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC-CCCccceeehhhHHHHHHhCCCCCcCCCH
Confidence                                       00112458999999999998876 89999999999999999999999998776


Q ss_pred             HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCC--CCCcCHHHHHcC
Q psy2865         192 VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDP--TKRISVNSALCH  269 (395)
Q Consensus       192 ~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP--~~R~ta~e~L~H  269 (395)
                      ......+....+..                            ........++++.+||.+||..++  ..|+|+.+++.|
T Consensus       254 ~~~~~~i~~~~~~~----------------------------~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         254 TETQLKVINWENTL----------------------------HIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             HHHHHHHHcccccc----------------------------CCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            65555443211100                            011123468899999999776544  459999999999


Q ss_pred             CccccC
Q psy2865         270 PYLDEG  275 (395)
Q Consensus       270 p~f~~~  275 (395)
                      |||...
T Consensus       306 p~f~~~  311 (381)
T cd05626         306 PFFSEV  311 (381)
T ss_pred             cccCCC
Confidence            999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=5.8e-32  Score=254.00  Aligned_cols=164  Identities=24%  Similarity=0.274  Sum_probs=137.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||+++.... ........+||+.|+|||++
T Consensus        90 ~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~g~~~y~aPE~~  168 (318)
T cd05570          90 SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL-GGVTTSTFCGTPDYIAPEIL  168 (318)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCc-CCCcccceecCccccCHHHh
Confidence            34688889999999999999999999999999999999999999999999999875322 12223445789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|..||.+.+....+..+...                                ...+
T Consensus       169 ~~~~-~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  215 (318)
T cd05570         169 SYQP-YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED--------------------------------EVRY  215 (318)
T ss_pred             cCCC-CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            8876 899999999999999999999999988766555544321                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH-----HHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV-----NSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta-----~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|||+     .+++.||||...
T Consensus       216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            34567899999999999999999999     999999999763

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.3e-32  Score=258.05  Aligned_cols=166  Identities=23%  Similarity=0.326  Sum_probs=136.9

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++..... ........+||..|+|||+
T Consensus        89 ~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~gt~~y~aPE~  167 (330)
T cd05586          89 KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLT-DNKTTNTFCGTTEYLAPEV  167 (330)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCC-CCCCccCccCCccccCHHH
Confidence            345688999999999999999999999999999999999999999999999999875322 1223445689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...++.++||||+||++|+|++|..||.+.+....+..|...  .                              ..
T Consensus       168 ~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~--~------------------------------~~  215 (330)
T cd05586         168 LLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG--K------------------------------VR  215 (330)
T ss_pred             HcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC--C------------------------------CC
Confidence            987655899999999999999999999999887765555444210  0                              01


Q ss_pred             cC-CCCCHHHHHHHHHccccCCCCCc----CHHHHHcCCccccC
Q psy2865         237 LS-SQATGEAVHLLVQMLYFDPTKRI----SVNSALCHPYLDEG  275 (395)
Q Consensus       237 ~~-~~~~~~~~dll~~mL~~dP~~R~----ta~e~L~Hp~f~~~  275 (395)
                      ++ ...+..+.+||.+||..||.+|+    ++.+++.||||...
T Consensus       216 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         216 FPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence            11 23578899999999999999998    79999999999763

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.8e-32  Score=256.50  Aligned_cols=167  Identities=22%  Similarity=0.337  Sum_probs=137.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC--------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP--------------------  138 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~--------------------  138 (395)
                      ..+++..+..++.||+.||.|||..||+||||||+|||++.++.+||+|||++.......                    
T Consensus        96 ~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (350)
T cd05573          96 DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLV  175 (350)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccc
Confidence            568888999999999999999999999999999999999999999999999998654322                    


Q ss_pred             --------CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHH
Q psy2865         139 --------NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEM  210 (395)
Q Consensus       139 --------~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~  210 (395)
                              .......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+.......+.......     
T Consensus       176 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-----  249 (350)
T cd05573         176 RRRDHKQRRVRANSTVGTPDYIAPEVLRGTP-YGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESL-----  249 (350)
T ss_pred             cccccccccccccccccCccccCHHHHcCCC-CCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcc-----
Confidence                    11234467999999999998875 8999999999999999999999999888666665554311100     


Q ss_pred             HhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcC-HHHHHcCCccccC
Q psy2865         211 RHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRIS-VNSALCHPYLDEG  275 (395)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t-a~e~L~Hp~f~~~  275 (395)
                                             ........++.+.+||.+||. ||.+|++ +.++|+||||...
T Consensus       250 -----------------------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         250 -----------------------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             -----------------------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence                                   011112368899999999998 9999999 9999999999763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.5e-32  Score=255.33  Aligned_cols=168  Identities=23%  Similarity=0.279  Sum_probs=137.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|.....    .....+||+.|+|||++
T Consensus        95 ~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~  170 (333)
T cd05600          95 LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YANSVVGSPDYMAPEVL  170 (333)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----ccCCcccCccccChhHh
Confidence            34678888899999999999999999999999999999999999999999999986432    34456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|.+||.+.+..+.+..+.........                    +    .....
T Consensus       171 ~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--------------------~----~~~~~  225 (333)
T cd05600         171 RGKG-YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR--------------------P----VYDDP  225 (333)
T ss_pred             cCCC-CCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC--------------------C----CCCcc
Confidence            8875 899999999999999999999999988877666655431110000                    0    00000


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+..+.+||.+||..+|.+|+|+.+++.||||..
T Consensus       226 ~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~  262 (333)
T cd05600         226 RFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE  262 (333)
T ss_pred             ccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence            1346789999999999999999999999999999986

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=8.6e-32  Score=252.56  Aligned_cols=163  Identities=25%  Similarity=0.323  Sum_probs=135.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++.
T Consensus        91 ~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~~  169 (316)
T cd05619          91 HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML-GDAKTCTFCGTPDYIAPEILL  169 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCC-CCCceeeecCCccccCHHHHc
Confidence            4577888889999999999999999999999999999999999999999999875322 122334567899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. |+.++||||+||++|+|++|..||.+.+....+..+...                                ....+
T Consensus       170 ~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--------------------------------~~~~~  216 (316)
T cd05619         170 GQK-YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--------------------------------NPCYP  216 (316)
T ss_pred             CCC-CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------------------------CCCCC
Confidence            875 899999999999999999999999987765555444210                                01123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHH-HHHcCCccccC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVN-SALCHPYLDEG  275 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~-e~L~Hp~f~~~  275 (395)
                      ...+..+.+||.+||..||.+|+++. ++++||||...
T Consensus       217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         217 RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence            44678899999999999999999996 89999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=1.3e-31  Score=258.09  Aligned_cols=167  Identities=22%  Similarity=0.301  Sum_probs=133.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC--------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP--------------------  138 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~--------------------  138 (395)
                      +.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|.......                    
T Consensus        96 ~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (382)
T cd05625          96 GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSN  175 (382)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccc
Confidence            467888899999999999999999999999999999999999999999999975321000                    


Q ss_pred             --------------------------CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH
Q psy2865         139 --------------------------NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV  192 (395)
Q Consensus       139 --------------------------~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~  192 (395)
                                                .......+||+.|+|||++.+.. |+.++||||+||++|||++|.+||.+.+..
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~  254 (382)
T cd05625         176 EWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQPPFLAQTPL  254 (382)
T ss_pred             cccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC-CCCeeeEEechHHHHHHHhCCCCCCCCCHH
Confidence                                      00112357999999999998876 899999999999999999999999988776


Q ss_pred             hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcC---HHHHHcC
Q psy2865         193 QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRIS---VNSALCH  269 (395)
Q Consensus       193 ~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t---a~e~L~H  269 (395)
                      .....+.......                            ........++.+.+||.+|+. +|.+|++   ++++++|
T Consensus       255 ~~~~~i~~~~~~~----------------------------~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         255 ETQMKVINWQTSL----------------------------HIPPQAKLSPEASDLIIKLCR-GPEDRLGKNGADEIKAH  305 (382)
T ss_pred             HHHHHHHccCCCc----------------------------CCCCcccCCHHHHHHHHHHcc-CHhHcCCCCCHHHHhcC
Confidence            6555543211100                            011124568899999999875 9999997   9999999


Q ss_pred             CccccC
Q psy2865         270 PYLDEG  275 (395)
Q Consensus       270 p~f~~~  275 (395)
                      |||...
T Consensus       306 p~f~~~  311 (382)
T cd05625         306 PFFKTI  311 (382)
T ss_pred             CCcCCc
Confidence            999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=1.3e-31  Score=252.79  Aligned_cols=168  Identities=22%  Similarity=0.340  Sum_probs=132.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++.... ........+||+.|+|||++
T Consensus        90 ~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (329)
T cd05618          90 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIAPEIL  168 (329)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC-CCCccccccCCccccCHHHH
Confidence            35688889999999999999999999999999999999999999999999999975322 12233456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH-----hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV-----QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~-----~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      .+.. ++.++|||||||++|+|++|..||......     .....+....                            ..
T Consensus       169 ~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i----------------------------~~  219 (329)
T cd05618         169 RGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI----------------------------LE  219 (329)
T ss_pred             cCCC-CCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH----------------------------hc
Confidence            8875 899999999999999999999999532110     0000010000                            00


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcC------HHHHHcCCccccC
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRIS------VNSALCHPYLDEG  275 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~t------a~e~L~Hp~f~~~  275 (395)
                      ....++...+..+.+||.+||..||.+|+|      +.++++||||...
T Consensus       220 ~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         220 KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             CCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            112345667889999999999999999998      5899999999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=9.3e-32  Score=253.80  Aligned_cols=168  Identities=23%  Similarity=0.331  Sum_probs=133.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++
T Consensus        90 ~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (329)
T cd05588          90 QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR-PGDTTSTFCGTPNYIAPEIL  168 (329)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc-CCCccccccCCccccCHHHH
Confidence            35689999999999999999999999999999999999999999999999999875322 12234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh-----HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ-----QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~-----~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      .+.. ++.++||||+||++|+|++|..||.......     ....+.+.+                            ..
T Consensus       169 ~~~~-~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~----------------------------~~  219 (329)
T cd05588         169 RGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI----------------------------LE  219 (329)
T ss_pred             cCCC-CCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH----------------------------Hc
Confidence            8875 8999999999999999999999996422110     000000000                            00


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcC------HHHHHcCCccccC
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRIS------VNSALCHPYLDEG  275 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~t------a~e~L~Hp~f~~~  275 (395)
                      ....++...+..+.+||.+||..||.+|+|      +++++.||||...
T Consensus       220 ~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         220 KQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            112345567889999999999999999987      7899999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0696|consensus

Probab=99.97  E-value=4e-31  Score=239.38  Aligned_cols=169  Identities=22%  Similarity=0.242  Sum_probs=148.9

Q ss_pred             HHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          75 KEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        75 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      -++-+.|-|..+.+|+++|+.||-+||+.|||+||||.+||+++.+|+|||+|||++..-.- ......++|||+-|+||
T Consensus       441 iQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~-~~~TTkTFCGTPdYiAP  519 (683)
T KOG0696|consen  441 IQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF-DGVTTKTFCGTPDYIAP  519 (683)
T ss_pred             HHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc-CCcceeeecCCCccccc
Confidence            46778999999999999999999999999999999999999999999999999999874322 33455678999999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.-.+ |+.++|+||+|+++|||+.|.+||.|.++.+.+..|++.-                                
T Consensus       520 EIi~YqP-YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn--------------------------------  566 (683)
T KOG0696|consen  520 EIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN--------------------------------  566 (683)
T ss_pred             ceEEecc-cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc--------------------------------
Confidence            9998877 9999999999999999999999999999999999987632                                


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCH-----HHHHcCCccccCcc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISV-----NSALCHPYLDEGRL  277 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta-----~e~L~Hp~f~~~~~  277 (395)
                      ...+...+.++.++...+|...|.+|..+     .++-.||||....+
T Consensus       567 vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  567 VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             CcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence            24556788899999999999999999853     57899999986543

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=1.1e-31  Score=247.52  Aligned_cols=167  Identities=19%  Similarity=0.247  Sum_probs=134.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++...... ........||+.|+|||++
T Consensus        91 ~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~-~~~~~~~~g~~~y~aPE~~  169 (280)
T cd05608          91 NPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG-QSKTKGYAGTPGFMAPELL  169 (280)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC-CccccccCCCcCccCHHHh
Confidence            346888889999999999999999999999999999999999999999999999765432 2233446789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|..||.+.........+....                            .......
T Consensus       170 ~~~~-~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~----------------------------~~~~~~~  220 (280)
T cd05608         170 QGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI----------------------------LNDSVTY  220 (280)
T ss_pred             cCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh----------------------------cccCCCC
Confidence            8875 8999999999999999999999998754322211111100                            0011123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~  274 (395)
                      +...+..+.+|+.+||..||++|+     |++++++||||..
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         221 PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence            456788999999999999999999     8999999999976

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=2e-31  Score=249.15  Aligned_cols=194  Identities=26%  Similarity=0.369  Sum_probs=148.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++........   ......+++..|+|||
T Consensus       114 ~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  193 (310)
T cd07865         114 VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPE  193 (310)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcH
Confidence            4688899999999999999999999999999999999999999999999999986543211   1223456788999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+...++.++||||+||++|+|++|.++|.+.+...++..+..+.|..+++.++.............+..........
T Consensus       194 ~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
T cd07865         194 LLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKER  273 (310)
T ss_pred             HhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHh
Confidence            98776557889999999999999999999999998888888888888888777655442111111010000000000000


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      -.....+..+.+||.+||..||.+|||++++|+||||
T Consensus       274 l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         274 LKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             cccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            0112346788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=7.1e-31  Score=249.40  Aligned_cols=191  Identities=33%  Similarity=0.487  Sum_probs=152.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||+.||+||||+|+||+++.++.++|+|||+++...    .......+|..|+|||++.
T Consensus       115 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~----~~~~~~~~~~~y~aPE~~~  190 (345)
T cd07877         115 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIML  190 (345)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc----ccccccccCCCccCHHHHh
Confidence            357888889999999999999999999999999999999999999999999998642    2334567899999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+....+..+....+.+++..+................... ...+....
T Consensus       191 ~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  269 (345)
T cd07877         191 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP-KMNFANVF  269 (345)
T ss_pred             CccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccC-Ccchhhhc
Confidence            75458899999999999999999999999988888888888888888887766553322111111100000 00111222


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+|+|+.++|.||||..
T Consensus       270 ~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         270 IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             CCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence            356788999999999999999999999999999975

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=6.9e-31  Score=249.33  Aligned_cols=191  Identities=33%  Similarity=0.496  Sum_probs=153.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||+.||+||||+|+||+++.++.++|+|||++.....    ......+++.|+|||++.
T Consensus       113 ~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~  188 (343)
T cd07880         113 EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS----EMTGYVVTRWYRAPEVIL  188 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc----CccccccCCcccCHHHHh
Confidence            4688889999999999999999999999999999999999999999999999986432    233457789999999997


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|+||+||++|+|++|.+||.+.+....+..+....+.++.+++.................. ....+..+.
T Consensus       189 ~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  267 (343)
T cd07880         189 NWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRF-RKKDFRSLL  267 (343)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhcccc-CcchHHHhc
Confidence            6445789999999999999999999999998888888888888777777655554322221111111111 011233445


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+|||+.+++.||||..
T Consensus       268 ~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~  303 (343)
T cd07880         268 PNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE  303 (343)
T ss_pred             cCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence            678889999999999999999999999999999975

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.9e-31  Score=249.64  Aligned_cols=195  Identities=37%  Similarity=0.624  Sum_probs=157.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|.||+++.++.++|+|||++........  .......+|..|+|||+
T Consensus        98 ~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  177 (330)
T cd07834          98 QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPEL  177 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCcee
Confidence            3678888899999999999999999999999999999999999999999999987654321  23455678999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...++.++|+||+||++|+|++|.+||.+.+..+++..+...+|.+++..+............... .......+..
T Consensus       178 ~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  256 (330)
T cd07834         178 LLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSL-PKKPKKPLSK  256 (330)
T ss_pred             eecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhc-ccCCcchhHH
Confidence            988745899999999999999999999999999999999999999999988776543211111111100 0111112333


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..+..+.+||.+||..+|++|||++++|.||||..
T Consensus       257 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  294 (330)
T cd07834         257 LFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ  294 (330)
T ss_pred             hcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence            45567899999999999999999999999999999976

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.2e-31  Score=261.93  Aligned_cols=191  Identities=19%  Similarity=0.159  Sum_probs=134.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||..|||||||||+|||++.++.++|+|||+|+........ .....+||+.|+|||++
T Consensus       255 ~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~  334 (461)
T PHA03211        255 RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVL  334 (461)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHH
Confidence            36888889999999999999999999999999999999999999999999999865432111 12345799999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCC-CCCCCC------hHhHHHHHHHhcCCCCHHHHHh----hhhhhhhhh---hh
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRI-LFQAQS------PVQQLGLITDLLGTPTPEEMRH----ACDGAKCHM---LR  223 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~-~f~~~~------~~~~l~~i~~~~g~~~~~~~~~----~~~~~~~~~---~~  223 (395)
                      .+.. ++.++|||||||++|||++|.. +|....      ...++..|+...+....++...    .........   .+
T Consensus       335 ~~~~-~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  413 (461)
T PHA03211        335 AGDP-YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRR  413 (461)
T ss_pred             cCCC-CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccC
Confidence            8876 8999999999999999998764 444321      1344555554433322111000    000000000   00


Q ss_pred             ccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .......+.    .....+..+.+||.+||.+||.+||||.|+|+||||..
T Consensus       414 ~~~~~~~~~----~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        414 PAYTRPAWT----RYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             CccCCcchh----hhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            000000111    11245668999999999999999999999999999964

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=4.8e-32  Score=255.93  Aligned_cols=168  Identities=21%  Similarity=0.314  Sum_probs=137.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|..............+||+.|+|||++.
T Consensus        97 ~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (330)
T cd05601          97 DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLT  176 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhc
Confidence            46888889999999999999999999999999999999999999999999999876433222233457899999999986


Q ss_pred             c-----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         159 G-----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       159 ~-----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      +     ...++.++|||||||++|+|++|..||.+.+....+..|......                            .
T Consensus       177 ~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~----------------------------~  228 (330)
T cd05601         177 TMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF----------------------------L  228 (330)
T ss_pred             cccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc----------------------------c
Confidence            3     234788999999999999999999999988776666655432100                            0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      .+......+..+.+||..||. ||.+|||+.+++.||||...
T Consensus       229 ~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         229 KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            011223568899999999998 99999999999999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=3.6e-31  Score=243.97  Aligned_cols=188  Identities=28%  Similarity=0.464  Sum_probs=148.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||..|++||||+|.||+++. +.++|+|||++......  .......++..|+|||++.
T Consensus        95 ~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~  171 (282)
T cd07831          95 RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK--PPYTEYISTRWYRAPECLL  171 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC--CCcCCCCCCcccCChhHhh
Confidence            46788999999999999999999999999999999999999 99999999999865432  2234457899999999886


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+...+|.+.................   .............
T Consensus       172 ~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  248 (282)
T cd07831         172 TDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYN---FPSKKGTGLRKLL  248 (282)
T ss_pred             cCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccccc---CcccccccHHHHc
Confidence            6555788999999999999999999999999998989999888888877553222111100000   0000011112233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...+..+.+||.+||..||++|||+.++|+||||
T Consensus       249 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         249 PNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            4668899999999999999999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=1.8e-31  Score=250.96  Aligned_cols=164  Identities=22%  Similarity=0.250  Sum_probs=136.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++.... ........+||+.|+|||++
T Consensus        90 ~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (321)
T cd05603          90 ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE-PEETTSTFCGTPEYLAPEVL  168 (321)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC-CCCccccccCCcccCCHHHh
Confidence            45678888889999999999999999999999999999999999999999999875322 12234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|.+||.+.+....+..+..                                ....+
T Consensus       169 ~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~--------------------------------~~~~~  215 (321)
T cd05603         169 RKEP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH--------------------------------KPLQL  215 (321)
T ss_pred             cCCC-CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc--------------------------------CCCCC
Confidence            8765 89999999999999999999999998776555444421                                11234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH----HHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV----NSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta----~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|+++    .++++|+||...
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         216 PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence            45678889999999999999999875    599999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=9.6e-32  Score=253.34  Aligned_cols=163  Identities=23%  Similarity=0.270  Sum_probs=137.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.... ........+||+.|+|||++
T Consensus        90 ~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (325)
T cd05602          90 ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-HNGTTSTFCGTPEYLAPEVL  168 (325)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccccc-CCCCcccccCCccccCHHHH
Confidence            35677888888999999999999999999999999999999999999999999975432 12234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|.+||.+.+....+..+...                                ....
T Consensus       169 ~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  215 (325)
T cd05602         169 HKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--------------------------------PLQL  215 (325)
T ss_pred             cCCC-CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC--------------------------------CcCC
Confidence            8875 899999999999999999999999988776665554321                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHH----HHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVN----SALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~----e~L~Hp~f~~  274 (395)
                      .+..+..+.+||.+||..||.+|+++.    ++++|+||..
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence            456788999999999999999999876    8999999965

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.97  E-value=2.2e-31  Score=250.62  Aligned_cols=164  Identities=23%  Similarity=0.253  Sum_probs=137.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||+++..... .......+||+.|+|||++
T Consensus        95 ~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~  173 (323)
T cd05615          95 VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD-GVTTRTFCGTPDYIAPEII  173 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC-CccccCccCCccccCHHHH
Confidence            356888899999999999999999999999999999999999999999999998754321 1223345789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|.+||.+.+....+..|...                                ....
T Consensus       174 ~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  220 (323)
T cd05615         174 AYQP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH--------------------------------NVSY  220 (323)
T ss_pred             cCCC-CCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            8765 899999999999999999999999988776665555431                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~  275 (395)
                      +...+..+.+|+.+||..||.+|++     +.++++||||...
T Consensus       221 p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         221 PKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            4556788999999999999999997     5789999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=7.6e-32  Score=254.01  Aligned_cols=163  Identities=21%  Similarity=0.257  Sum_probs=136.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++
T Consensus        90 ~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (325)
T cd05604          90 ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA-QSDTTTTFCGTPEYLAPEVI  168 (325)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC-CCCCcccccCChhhCCHHHH
Confidence            45688889999999999999999999999999999999999999999999999875322 12234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|.+||.+.+....+..+...                                ...+
T Consensus       169 ~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~--------------------------------~~~~  215 (325)
T cd05604         169 RKQP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK--------------------------------PLVL  215 (325)
T ss_pred             cCCC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC--------------------------------CccC
Confidence            8876 899999999999999999999999988766555544320                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH----HHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV----NSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta----~e~L~Hp~f~~  274 (395)
                      .+..+..+.++|.+||..||.+||++    .+++.||||..
T Consensus       216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         216 RPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence            35678889999999999999999976    59999999976

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.5e-31  Score=256.04  Aligned_cols=168  Identities=22%  Similarity=0.308  Sum_probs=135.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-----------------
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-----------------  140 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-----------------  140 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||++..+......                 
T Consensus        95 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (364)
T cd05599          95 KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDF  174 (364)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccccccccc
Confidence            346899999999999999999999999999999999999999999999999998754221000                 


Q ss_pred             --------------------CcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHH
Q psy2865         141 --------------------AMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITD  200 (395)
Q Consensus       141 --------------------~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~  200 (395)
                                          .....+||+.|+|||++.+.. |+.++|||||||++|+|++|.+||.+.+....+..+..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~  253 (364)
T cd05599         175 ISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG-YNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIIN  253 (364)
T ss_pred             ccccccccccccchhhcccccccccccCccccCHHHHcCCC-CCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHc
Confidence                                112347999999999998776 89999999999999999999999998887666555532


Q ss_pred             hcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcC---HHHHHcCCccccC
Q psy2865         201 LLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRIS---VNSALCHPYLDEG  275 (395)
Q Consensus       201 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t---a~e~L~Hp~f~~~  275 (395)
                      .....                            ........++.+.+||.+||. +|.+|++   +.++|.||||...
T Consensus       254 ~~~~~----------------------------~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         254 WKETL----------------------------QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             CCCcc----------------------------CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            11000                            001112467899999999997 9999998   9999999999764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=8.2e-31  Score=247.21  Aligned_cols=224  Identities=34%  Similarity=0.533  Sum_probs=173.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++....    ......+++..|+|||++.
T Consensus       103 ~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~----~~~~~~~~~~~y~aPE~~~  178 (328)
T cd07856         103 RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD----PQMTGYVSTRYYRAPEIML  178 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC----CCcCCCcccccccCceeee
Confidence            356777778899999999999999999999999999999999999999999987542    2334457788999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+......+..+.+.+|.++.+.+.................... .......
T Consensus       179 ~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  257 (328)
T cd07856         179 TWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREP-VPFSEKF  257 (328)
T ss_pred             ccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCC-CcHHHHc
Confidence            644589999999999999999999999999998888888999999998877665432221111111111000 1111233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSA  318 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (395)
                      +..+..+.+||.+||..+|++|||+++++.||||....                                  .+..+|++
T Consensus       258 ~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~----------------------------------~~~~~~~~  303 (328)
T cd07856         258 KNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH----------------------------------DPTDEPVA  303 (328)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc----------------------------------CCccccCc
Confidence            46778999999999999999999999999999997521                                  11233555


Q ss_pred             CCCCCchhHHhhhhhhHHhhHHH
Q psy2865         319 PQPFDDTWERKLTSVQQVKEEMH  341 (395)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~i~  341 (395)
                      ...|+|++....+.+..|+-.|+
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~  326 (328)
T cd07856         304 EEKFDWSFNDADLPVDTWKVMMY  326 (328)
T ss_pred             hhhcCCchhcccCCHHHHHHHhc
Confidence            56788888888888888876664

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.97  E-value=6.5e-31  Score=251.85  Aligned_cols=169  Identities=20%  Similarity=0.240  Sum_probs=135.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.............+||+.|+|||++.
T Consensus       137 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~  216 (371)
T cd05622         137 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK  216 (371)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHh
Confidence            34778888899999999999999999999999999999999999999999999876433222334568999999999997


Q ss_pred             cCC---CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         159 GAR---HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       159 ~~~---~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +..   .++.++||||+||++|+|++|.+||.+.+....+..|.......                            .+
T Consensus       217 ~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----------------------------~~  268 (371)
T cd05622         217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL----------------------------TF  268 (371)
T ss_pred             ccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc----------------------------cC
Confidence            542   37889999999999999999999999888776666664321110                            01


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCC--CcCHHHHHcCCccccC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTK--RISVNSALCHPYLDEG  275 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~--R~ta~e~L~Hp~f~~~  275 (395)
                      ......+..+.+||..||..++.+  |++++++++||||.+.
T Consensus       269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            122457889999999999843333  7899999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=5e-31  Score=244.81  Aligned_cols=190  Identities=35%  Similarity=0.522  Sum_probs=149.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||..||+||||+|+||+++. ++.++|+|||++....... ...+..++++.|+|||++
T Consensus       105 ~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~  183 (295)
T cd07837         105 RPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV-KSYTHEIVTLWYRAPEVL  183 (295)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc-cccCCcccccCCCChHHh
Confidence            45788999999999999999999999999999999999998 8999999999998653321 223344678899999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|.+||.+.+....+..+...++.++...|.............    ..........
T Consensus       184 ~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  259 (295)
T cd07837         184 LGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFP----QWKPQDLSRA  259 (295)
T ss_pred             hCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcC----cccchhHHHh
Confidence            775557999999999999999999999999998888888888888877766554332111110000    0000111223


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      .+..+..+.+||.+||..||.+|||+.++|.||||.
T Consensus       260 ~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         260 VPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             ccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            356788999999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.97  E-value=6.1e-31  Score=244.10  Aligned_cols=190  Identities=35%  Similarity=0.498  Sum_probs=151.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.+
T Consensus       102 ~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~  180 (293)
T cd07843         102 PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL-KPYTQLVVTLWYRAPELLLG  180 (293)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-cccccccccccccCchhhcC
Confidence            58888999999999999999999999999999999999999999999999998754321 23344567889999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      ...++.++||||+||++|+|++|.+||.+.+....+..+...++.|....|+............ +.. .....+....+
T Consensus       181 ~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~  258 (293)
T cd07843         181 AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKT-FTK-YPYNQLRKKFP  258 (293)
T ss_pred             CccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccc-ccc-ccchhhhcccc
Confidence            6557889999999999999999999999999988899999999988888777553222111100 000 00111111122


Q ss_pred             C--CCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         240 Q--ATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       240 ~--~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .  .+..+.+||.+||..||++|||+.|+|.||||
T Consensus       259 ~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         259 ALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             ccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            2  48889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.97  E-value=5.4e-31  Score=243.22  Aligned_cols=190  Identities=33%  Similarity=0.446  Sum_probs=150.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|++|||..|++|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus        95 ~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  173 (284)
T cd07860          95 SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILL  173 (284)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC-ccccccccccccccCCeEEe
Confidence            45677888899999999999999999999999999999999999999999998865422 22334456788999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|||||||++|+|++|..||.+.+..+.+..+.+.++.+....|+............   ............
T Consensus       174 ~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  250 (284)
T cd07860         174 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF---PKWARQDFSKVV  250 (284)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc---ccccccCHHHHc
Confidence            76556889999999999999999999999998888888888888888776665432211110000   001111222334


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..++.+.+||.+||..||.+|||++++|.||||
T Consensus       251 ~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         251 PPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             ccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            5678889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=8.8e-31  Score=243.58  Aligned_cols=190  Identities=34%  Similarity=0.482  Sum_probs=151.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||..||+|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.+
T Consensus        98 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~  176 (298)
T cd07841          98 VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP-NRKMTHQVVTRWYRAPELLFG  176 (298)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC-CccccccccceeeeCHHHHhC
Confidence            5788888999999999999999999999999999999999999999999999875432 123344467889999999876


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      ...++.++|+||+||++|+|++|.++|.+.+..+.+..+...++.+....+.......... ......   .........
T Consensus       177 ~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~  252 (298)
T cd07841         177 ARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV-EFKPFP---PTPLKQIFP  252 (298)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc-cccccC---Ccchhhhcc
Confidence            5558899999999999999999999999988888888888888888776665432211110 000000   011122345


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..+.+||.+||..||.+|||+.++|.||||.+
T Consensus       253 ~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~  287 (298)
T cd07841         253 AASDDALDLLQRLLTLNPNKRITARQALEHPYFSN  287 (298)
T ss_pred             cccHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence            56788999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-31  Score=256.92  Aligned_cols=167  Identities=21%  Similarity=0.251  Sum_probs=132.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-------------C----
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-------------K----  140 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-------------~----  140 (395)
                      .+.+++..++.++.|++.||.|||+.||+||||||+|||++.++.++|+|||+|+.+.....             .    
T Consensus        95 ~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (377)
T cd05629          95 YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRID  174 (377)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccc
Confidence            35678888999999999999999999999999999999999999999999999963211000             0    


Q ss_pred             -----------------------------CcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh
Q psy2865         141 -----------------------------AMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP  191 (395)
Q Consensus       141 -----------------------------~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~  191 (395)
                                                   .....+||+.|+|||++.+.. |+.++||||+||++|||++|.+||.+.+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~  253 (377)
T cd05629         175 NRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG-YGQECDWWSLGAIMFECLIGWPPFCSENS  253 (377)
T ss_pred             cccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCC-CCCceeeEecchhhhhhhcCCCCCCCCCH
Confidence                                         001357999999999998875 89999999999999999999999998887


Q ss_pred             HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCC---cCHHHHHc
Q psy2865         192 VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKR---ISVNSALC  268 (395)
Q Consensus       192 ~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R---~ta~e~L~  268 (395)
                      .+.+..|.......                            .+......+..+.+||.+||. +|.+|   +|+.+++.
T Consensus       254 ~~~~~~i~~~~~~~----------------------------~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~  304 (377)
T cd05629         254 HETYRKIINWRETL----------------------------YFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS  304 (377)
T ss_pred             HHHHHHHHccCCcc----------------------------CCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence            66666654311000                            001112467899999999998 77765   59999999


Q ss_pred             CCcccc
Q psy2865         269 HPYLDE  274 (395)
Q Consensus       269 Hp~f~~  274 (395)
                      ||||.+
T Consensus       305 hp~~~~  310 (377)
T cd05629         305 HPFFRG  310 (377)
T ss_pred             CCCcCC
Confidence            999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=1.2e-31  Score=256.26  Aligned_cols=168  Identities=22%  Similarity=0.319  Sum_probs=134.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-------------------
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-------------------  138 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-------------------  138 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||++.......                   
T Consensus        95 ~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (360)
T cd05627          95 KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQ  174 (360)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccccccc
Confidence            3568889999999999999999999999999999999999999999999999987542110                   


Q ss_pred             ---------------CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcC
Q psy2865         139 ---------------NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLG  203 (395)
Q Consensus       139 ---------------~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g  203 (395)
                                     .......+||+.|+|||++.+.. |+.++|||||||++|+|++|.+||.+.+....+..+.....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~  253 (360)
T cd05627         175 NMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKE  253 (360)
T ss_pred             ccccccccccccccccccccccCCCccccCHHHHcCCC-CCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCC
Confidence                           00112458999999999998876 89999999999999999999999998887666655542110


Q ss_pred             CCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCc---CHHHHHcCCccccC
Q psy2865         204 TPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRI---SVNSALCHPYLDEG  275 (395)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~---ta~e~L~Hp~f~~~  275 (395)
                      ..                            .+......+..+.+||.+|+. ||.+|+   +++++++||||.+.
T Consensus       254 ~~----------------------------~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         254 TL----------------------------VFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             ce----------------------------ecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence            00                            011112367899999999875 999998   58999999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0589|consensus

Probab=99.97  E-value=1.4e-31  Score=250.23  Aligned_cols=166  Identities=25%  Similarity=0.290  Sum_probs=149.6

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      +++..|+|+.+..|+-|++.|+.|||...|+|||||+.||+++.++.|+|+|||+|+.+..+. ....+++||+.|++||
T Consensus        98 ~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-~~a~tvvGTp~YmcPE  176 (426)
T KOG0589|consen   98 QKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-SLASTVVGTPYYMCPE  176 (426)
T ss_pred             HhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-hhhheecCCCcccCHH
Confidence            347899999999999999999999999999999999999999999999999999999886532 3566789999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.+ |+.++|||||||++|||++-++.|.+.+.......|......                               
T Consensus       177 il~d~p-Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~-------------------------------  224 (426)
T KOG0589|consen  177 ILSDIP-YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS-------------------------------  224 (426)
T ss_pred             HhCCCC-CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-------------------------------
Confidence            999987 999999999999999999999999999988888888765432                               


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .++...+.++..|+..||..+|+.||+|.++|.+|.+..
T Consensus       225 Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  225 PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence            355677889999999999999999999999999998853

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=2.6e-31  Score=250.59  Aligned_cols=166  Identities=22%  Similarity=0.299  Sum_probs=133.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..... ........+||+.|+|||++
T Consensus        90 ~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~  168 (327)
T cd05617          90 QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG-PGDTTSTFCGTPNYIAPEIL  168 (327)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccC-CCCceecccCCcccCCHHHH
Confidence            35689999999999999999999999999999999999999999999999999875322 12234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH------hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV------QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~------~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      .+.. ++.++|||||||++|+|++|..||......      +.+..+..                               
T Consensus       169 ~~~~-~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------------------  216 (327)
T cd05617         169 RGEE-YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL-------------------------------  216 (327)
T ss_pred             CCCC-CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH-------------------------------
Confidence            8875 899999999999999999999999643211      11111110                               


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcC------HHHHHcCCccccCc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRIS------VNSALCHPYLDEGR  276 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t------a~e~L~Hp~f~~~~  276 (395)
                      .....++...+..+.+||.+||..||.+|++      +++++.||||....
T Consensus       217 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~  267 (327)
T cd05617         217 EKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID  267 (327)
T ss_pred             hCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence            0112345567889999999999999999998      57999999998743

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.97  E-value=5.5e-31  Score=251.00  Aligned_cols=163  Identities=21%  Similarity=0.202  Sum_probs=125.7

Q ss_pred             CCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc---
Q psy2865          83 SRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG---  159 (395)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~---  159 (395)
                      +..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... .......+||..|+|||++..   
T Consensus       167 ~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~  245 (353)
T PLN00034        167 EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT-MDPCNSSVGTIAYMSPERINTDLN  245 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc-cccccccccCccccCccccccccc
Confidence            3445678999999999999999999999999999999999999999999865432 122345689999999998743   


Q ss_pred             -CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 -ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 -~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                       ...++.++|||||||++|+|++|..||......+....+.....                            ......+
T Consensus       246 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  297 (353)
T PLN00034        246 HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM----------------------------SQPPEAP  297 (353)
T ss_pred             cCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc----------------------------cCCCCCC
Confidence             12245689999999999999999999974432222222111100                            0011233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||++|||+.|+|+||||..
T Consensus       298 ~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        298 ATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             CccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence            567789999999999999999999999999999976

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.97  E-value=7e-31  Score=246.18  Aligned_cols=194  Identities=32%  Similarity=0.477  Sum_probs=148.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC----CCCeEEeeCCcccccCCCCC--CCccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA----TYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYR  152 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~----~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~  152 (395)
                      ..+++..+..++.||+.|+.|||+.||+||||+|+||+++.    ++.+||+|||++........  ......++|..|+
T Consensus       103 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~  182 (316)
T cd07842         103 VSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYR  182 (316)
T ss_pred             cCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCcccccccc
Confidence            36788888899999999999999999999999999999999    99999999999987543221  1223457789999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh---------HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh-
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP---------VQQLGLITDLLGTPTPEEMRHACDGAKCHML-  222 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~---------~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~-  222 (395)
                      |||++.+...++.++|||||||++|+|++|.+||.+...         ...+..+...++.+.+..+............ 
T Consensus       183 aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  262 (316)
T cd07842         183 APELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLM  262 (316)
T ss_pred             CHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhh
Confidence            999998765689999999999999999999999987643         2456677788888877766543222111110 


Q ss_pred             ----hccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         223 ----RQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       223 ----~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                          ........+..........+..+.+||.+||.+||.+|||+.+++.||||
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         263 KDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                00001112222222334678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=7.2e-31  Score=248.08  Aligned_cols=170  Identities=19%  Similarity=0.247  Sum_probs=135.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..++.++.||+.|+.|||+.||+||||||+|||++.++.++|+|||++..............+||+.|+|||++.
T Consensus        97 ~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623          97 DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHh
Confidence            45788888999999999999999999999999999999999999999999999764332222233457999999999986


Q ss_pred             c----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         159 G----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       159 ~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +    ...++.++|||||||++|+|++|..||.+.+....+..|.......                           ..
T Consensus       177 ~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---------------------------~~  229 (332)
T cd05623         177 AMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF---------------------------QF  229 (332)
T ss_pred             ccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc---------------------------cC
Confidence            3    2347899999999999999999999999888777666654311000                           01


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCC--CcCHHHHHcCCccccC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTK--RISVNSALCHPYLDEG  275 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~--R~ta~e~L~Hp~f~~~  275 (395)
                      .......+..+.+||.+||..++.+  |+|+.++++||||.+.
T Consensus       230 p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         230 PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence            1122456889999999999776554  6899999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=8e-31  Score=245.14  Aligned_cols=192  Identities=32%  Similarity=0.491  Sum_probs=149.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC----------CCccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN----------KAMTQEVVT  148 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~----------~~~~~~~~t  148 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||+++.......          ...+..+++
T Consensus       110 ~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (311)
T cd07866         110 VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVT  189 (311)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceec
Confidence            4688899999999999999999999999999999999999999999999999986532211          122345678


Q ss_pred             ccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC
Q psy2865         149 QYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS  228 (395)
Q Consensus       149 ~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (395)
                      +.|+|||++.+...++.++||||+||++|+|++|.++|.+.+....+..+....+.+.+..|+............  ...
T Consensus       190 ~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  267 (311)
T cd07866         190 RWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVH--SFT  267 (311)
T ss_pred             cCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccc--cCC
Confidence            899999998775558899999999999999999999999999999999999888887776654331111100000  000


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .....+........+.+.+||.+||..||.+|||+.+++.||||
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         268 NYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             CCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            00011111233455789999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.97  E-value=1.2e-30  Score=241.91  Aligned_cols=191  Identities=29%  Similarity=0.406  Sum_probs=143.1

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||..||+|+||||+||+++.++.++|+|||+++..... .......+++..|+|||++.+
T Consensus        99 ~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~  177 (291)
T cd07870          99 GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP-SQTYSSEVVTLWYRPPDVLLG  177 (291)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC-CCCCCCccccccccCCceeec
Confidence            4566677789999999999999999999999999999999999999999999864322 122344567899999999876


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCC-hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc-cccCCccchhhcc
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQS-PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ-TRKSQSLSSLYSL  237 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  237 (395)
                      ...++..+||||+||++|+|++|.+||.+.+ ..+++..+...+|.|....+.............. ......+......
T Consensus       178 ~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (291)
T cd07870         178 ATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKR  257 (291)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccc
Confidence            5457889999999999999999999998765 4577777888888888776654422111100000 0000001000000


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                       ...++.+.+||.+||..||.+|||+.++|.||||
T Consensus       258 -~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         258 -LSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             -cCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence             1236789999999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=3.2e-31  Score=254.77  Aligned_cols=168  Identities=21%  Similarity=0.276  Sum_probs=133.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC---------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD---------------------  137 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~---------------------  137 (395)
                      ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||+|..+...                     
T Consensus        96 ~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (376)
T cd05598          96 GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSE  175 (376)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccc
Confidence            45788888999999999999999999999999999999999999999999998532100                     


Q ss_pred             ---------------------CCCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHH
Q psy2865         138 ---------------------PNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLG  196 (395)
Q Consensus       138 ---------------------~~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~  196 (395)
                                           ........+||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~  254 (376)
T cd05598         176 EWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQL  254 (376)
T ss_pred             cccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC-CCcceeeeeccceeeehhhCCCCCCCCCHHHHHH
Confidence                                 000112357999999999998876 8999999999999999999999999887766555


Q ss_pred             HHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCc---CHHHHHcCCccc
Q psy2865         197 LITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRI---SVNSALCHPYLD  273 (395)
Q Consensus       197 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~---ta~e~L~Hp~f~  273 (395)
                      .+......                            .........++.+.+||.+|+. +|.+|+   |+.++++||||.
T Consensus       255 ~i~~~~~~----------------------------~~~~~~~~~s~~~~~li~~l~~-~p~~R~~~~t~~ell~h~~~~  305 (376)
T cd05598         255 KVINWETT----------------------------LHIPSQAKLSREASDLILRLCC-GAEDRLGKNGADEIKAHPFFK  305 (376)
T ss_pred             HHhccCcc----------------------------ccCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhCCCCcC
Confidence            44321100                            0011223578899999999774 999999   999999999998


Q ss_pred             cCc
Q psy2865         274 EGR  276 (395)
Q Consensus       274 ~~~  276 (395)
                      ...
T Consensus       306 ~~~  308 (376)
T cd05598         306 GID  308 (376)
T ss_pred             CCC
Confidence            643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=1.2e-31  Score=251.91  Aligned_cols=164  Identities=21%  Similarity=0.291  Sum_probs=139.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++...... .......+||+.|+|||++
T Consensus        92 ~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~g~~~y~aPE~~  170 (318)
T cd05582          92 EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFCGTVEYMAPEVV  170 (318)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCceecccCChhhcCHHHH
Confidence            456889999999999999999999999999999999999999999999999999865332 1233456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|..||.+.+....+..+...                                ...+
T Consensus       171 ~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~--------------------------------~~~~  217 (318)
T cd05582         171 NRRG-HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA--------------------------------KLGM  217 (318)
T ss_pred             cCCC-CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            8765 899999999999999999999999988776666555321                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~  275 (395)
                      +...++.+.+||.+||..||.+|||     +.+++.||||...
T Consensus       218 p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         218 PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            4567889999999999999999999     7789999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.97  E-value=1.7e-30  Score=239.99  Aligned_cols=193  Identities=28%  Similarity=0.428  Sum_probs=144.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.|++|+||+|.||+++.++.++|+|||++....... .......++..|+|||++
T Consensus        94 ~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~  172 (286)
T cd07847          94 PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG-DDYTDYVATRWYRAPELL  172 (286)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc-ccccCcccccccCCHHHH
Confidence            3457888899999999999999999999999999999999999999999999998654321 123345788999999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|.+||.+.+..+.+..+...++...+................ .............
T Consensus       173 ~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  251 (286)
T cd07847         173 VGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS-IPEPETREPLESK  251 (286)
T ss_pred             hCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc-CCCcccccCHHHH
Confidence            875558899999999999999999999999988877777776655544332111110000000000 0001111112223


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .+..+..+.+||.+||..||++|||+.+++.||||
T Consensus       252 ~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         252 FPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             hccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            34568899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0579|consensus

Probab=99.97  E-value=3.4e-31  Score=250.77  Aligned_cols=172  Identities=17%  Similarity=0.239  Sum_probs=142.7

Q ss_pred             HHHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccc
Q psy2865          74 KKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRA  153 (395)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a  153 (395)
                      .-+-+..|++..+..+..|++.||.|||+.+|||||||..|||++-+|.|+|+|||.+..... ......+++||++|||
T Consensus       120 mlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkRDsFIGTPYWMA  198 (1187)
T KOG0579|consen  120 MLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKRDSFIGTPYWMA  198 (1187)
T ss_pred             HHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh-HHhhhccccCCccccc
Confidence            345677899999999999999999999999999999999999999999999999998764322 2234567899999999


Q ss_pred             hhhhhcC----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         154 PEILMGA----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       154 PEvl~~~----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      |||+++.    ..|++.+||||||+++.||+.+.||-..-+++..+-.|.+.  .|| .                     
T Consensus       199 PEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS--ePP-T---------------------  254 (1187)
T KOG0579|consen  199 PEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPP-T---------------------  254 (1187)
T ss_pred             chheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc--CCC-c---------------------
Confidence            9998642    24999999999999999999999999888887777766541  111 0                     


Q ss_pred             ccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                           .--|..-+..|.|||.+||..||..||+|+|+|.||||.+.
T Consensus       255 -----LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  255 -----LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             -----ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence                 11234456689999999999999999999999999999753

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-30  Score=241.75  Aligned_cols=191  Identities=29%  Similarity=0.435  Sum_probs=146.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||+++...... ......+++..|+|||++.
T Consensus        98 ~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~  176 (291)
T cd07844          98 GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-KTYSNEVVTLWYRPPDVLL  176 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC-ccccccccccccCCcHHhh
Confidence            356788889999999999999999999999999999999999999999999987643211 1223345688899999988


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCC-hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQS-PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +...++.++||||+||++|+|++|.+||.+.. ..+++..+.+.++.+.+..|+................  ........
T Consensus       177 ~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  254 (291)
T cd07844         177 GSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFY--PPRPLINH  254 (291)
T ss_pred             cCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccccccc--CChhHHHh
Confidence            75558899999999999999999999998766 5677888888899888877765532211111100000  00111112


Q ss_pred             CCCCC--HHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQAT--GEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~--~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ....+  ..+.+||.+||..||.+|||+.++|.||||
T Consensus       255 ~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         255 APRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             CcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            22333  788999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.97  E-value=5.1e-31  Score=249.02  Aligned_cols=189  Identities=17%  Similarity=0.209  Sum_probs=133.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||+. +|+||||||+|||++.++.++|+|||++.....   ......+||+.|+|||++
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~~~~~~~g~~~y~aPE~~  174 (331)
T cd06649          98 KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERL  174 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc---cccccCCCCcCcCCHhHh
Confidence            4578888889999999999999985 699999999999999999999999999976532   223456789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHH----HHHhhhhhhhh---hhhhccccCCc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPE----EMRHACDGAKC---HMLRQTRKSQS  230 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~----~~~~~~~~~~~---~~~~~~~~~~~  230 (395)
                      .+.. ++.++|||||||++|+|++|..||.+.+..+....+    +.+...    ...........   ...........
T Consensus       175 ~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (331)
T cd06649         175 QGTH-YSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF----GRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRP  249 (331)
T ss_pred             cCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh----cccccccccCCccccCccccccccccccccccccc
Confidence            8875 899999999999999999999999876654432222    211100    00000000000   00000000000


Q ss_pred             ---c----c------hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         231 ---L----S------SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       231 ---~----~------~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                         .    .      .........++++.+||.+||.+||++|||+.++|.||||...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         250 AMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             chhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence               0    0      0000112467889999999999999999999999999999764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.97  E-value=5.7e-31  Score=260.62  Aligned_cols=165  Identities=18%  Similarity=0.217  Sum_probs=138.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++...... .......+||+.|+|||+
T Consensus       137 ~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~  216 (496)
T PTZ00283        137 NRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEI  216 (496)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHH
Confidence            3567888899999999999999999999999999999999999999999999998654321 122345689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++|||||||++|+|++|..||.+.+....+..+...                               ....
T Consensus       217 ~~~~~-~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~-------------------------------~~~~  264 (496)
T PTZ00283        217 WRRKP-YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAG-------------------------------RYDP  264 (496)
T ss_pred             hCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-------------------------------CCCC
Confidence            98876 899999999999999999999999987766555544321                               0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ++...++.+.+||.+||..||.+|||+.++|.|||+..
T Consensus       265 ~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        265 LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            44667889999999999999999999999999999854

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-30  Score=241.27  Aligned_cols=195  Identities=28%  Similarity=0.444  Sum_probs=150.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.|+.|||..|++|+||+|.||+++.++.++|+|||++.............++++..|+|||++
T Consensus        94 ~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~  173 (288)
T cd07833          94 PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELL  173 (288)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchh
Confidence            34578889999999999999999999999999999999999999999999999987654332244567889999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|.+||.+.+..+.+..+...+|..++..............................
T Consensus       174 ~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (288)
T cd07833         174 VGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRY  253 (288)
T ss_pred             cCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhc
Confidence            88744899999999999999999999999998888888888877777666544332211110000000000000001122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +...+..+.+||.+||..+|++|||+++++.||||
T Consensus       254 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         254 PGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            33458899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.2e-30  Score=244.65  Aligned_cols=171  Identities=23%  Similarity=0.274  Sum_probs=134.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..............+||+.|+|||++
T Consensus        96 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~  175 (331)
T cd05597          96 EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEIL  175 (331)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHH
Confidence            34688888999999999999999999999999999999999999999999999876543222223335789999999999


Q ss_pred             hc----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MG----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .+    ...++.++||||+||++|+|++|..||.+.+..+.+..|.......                           .
T Consensus       176 ~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~---------------------------~  228 (331)
T cd05597         176 QAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHF---------------------------Q  228 (331)
T ss_pred             hhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcc---------------------------c
Confidence            73    2347889999999999999999999999887766666554311100                           0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCC--CcCHHHHHcCCccccC
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTK--RISVNSALCHPYLDEG  275 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~--R~ta~e~L~Hp~f~~~  275 (395)
                      +.......+..+.+||.+||..++.+  |+++.++|.||||...
T Consensus       229 ~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         229 FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            11122347889999999999765544  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=1.7e-30  Score=239.59  Aligned_cols=191  Identities=37%  Similarity=0.525  Sum_probs=154.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||..||+|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~  171 (283)
T cd05118          93 RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTHYVVTRWYRAPELLL  171 (283)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccCccCcccccCcHHHh
Confidence            568888999999999999999999999999999999999999999999999998764322 2334457888999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|+||+||++|+|++|.++|.+.+..+++..+...++.+.+..+.................  .........
T Consensus       172 ~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  249 (283)
T cd05118         172 GDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKK--AGMPLPKLF  249 (283)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccc--cccCHHHhh
Confidence            764589999999999999999999999999999999999999999888877766533211111111100  011112334


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+..+.+||.+||..||.+||++.+++.||||
T Consensus       250 ~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         250 PNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            5678899999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0596|consensus

Probab=99.96  E-value=4.3e-31  Score=247.03  Aligned_cols=167  Identities=22%  Similarity=0.331  Sum_probs=126.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEv  156 (395)
                      ......-..++|..|++.|+.++|+.||||.||||.|+|+- .|.+||+|||+|..+..+... ...+.|||..||+||.
T Consensus       454 ~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEA  532 (677)
T KOG0596|consen  454 KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEA  532 (677)
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHH
Confidence            34444448899999999999999999999999999999994 577999999999987654332 2345799999999999


Q ss_pred             hhcCC----------CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc
Q psy2865         157 LMGAR----------HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR  226 (395)
Q Consensus       157 l~~~~----------~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  226 (395)
                      +....          ..+.++||||+|||+|+|+.|++||..-  ..+++++..+.. |.-                   
T Consensus       533 l~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~--~n~~aKl~aI~~-P~~-------------------  590 (677)
T KOG0596|consen  533 LTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI--INQIAKLHAITD-PNH-------------------  590 (677)
T ss_pred             HhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH--HHHHHHHHhhcC-CCc-------------------
Confidence            86322          1467899999999999999999999642  223333332221 110                   


Q ss_pred             cCCccchhhccCCCCCH-HHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         227 KSQSLSSLYSLSSQATG-EAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       227 ~~~~~~~~~~~~~~~~~-~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                             ..+++.-... ++.+++..||.+||.+|||+.++|+|||+..
T Consensus       591 -------~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  591 -------EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             -------cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence                   0112222222 2899999999999999999999999999974

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.96  E-value=3.8e-30  Score=243.71  Aligned_cols=194  Identities=30%  Similarity=0.507  Sum_probs=154.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC----CCcccccccccccchh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN----KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~----~~~~~~~~t~~y~aPE  155 (395)
                      .+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++........    .....+++|..|+|||
T Consensus       103 ~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  182 (337)
T cd07852         103 ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPE  182 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCce
Confidence            566777778999999999999999999999999999999999999999999986543221    2334567899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+...++.++||||+||++|+|++|.+||.+.+..+.+..+....+.+..+.+...........+...... ......
T Consensus       183 ~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  261 (337)
T cd07852         183 ILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSR-PRKPLD  261 (337)
T ss_pred             eeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccc-cccchh
Confidence            9876555889999999999999999999999999989999999998888887776655332222222111110 111122


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+..+.+||.+||..||++|||+.++++||||..
T Consensus       262 ~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         262 ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             hhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence            333457889999999999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.96  E-value=1.7e-30  Score=259.68  Aligned_cols=178  Identities=22%  Similarity=0.262  Sum_probs=128.5

Q ss_pred             CCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcCC--
Q psy2865          85 RKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGAR--  161 (395)
Q Consensus        85 ~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~--  161 (395)
                      .+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+|+.+..........+++|+.|+|||++....  
T Consensus       256 ~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~  335 (566)
T PLN03225        256 IIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQT  335 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCC
Confidence            45678999999999999999999999999999985 688999999999865433334455678999999999765322  


Q ss_pred             -------------------CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         162 -------------------HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       162 -------------------~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                                         .++.++||||+||++|||+++..  ...+...++..+....+.... .|......      
T Consensus       336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~--~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~------  406 (566)
T PLN03225        336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNL--RSDSNLIQFNRQLKRNDYDLV-AWRKLVEP------  406 (566)
T ss_pred             CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcC--CCchHHHHHHHHHHhcCCcHH-HHHHhhcc------
Confidence                               13445699999999999998654  444555555555544443322 22111000      


Q ss_pred             hccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         223 RQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                         .....+...+.........+.|||.+||.+||.+|||+.++|+||||..
T Consensus       407 ---~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~  455 (566)
T PLN03225        407 ---RASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDR  455 (566)
T ss_pred             ---ccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCC
Confidence               0111112233444555667889999999999999999999999999976

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-30  Score=241.01  Aligned_cols=165  Identities=21%  Similarity=0.297  Sum_probs=135.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.||+||||+|+||+++.++.++|+|||++.....  .......+||..|+|||++.
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~  174 (285)
T cd05605          97 PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE--GETIRGRVGTVGYMAPEVVK  174 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC--CCccccccCCCCccCcHHhc
Confidence            4578888999999999999999999999999999999999999999999999986532  12234458899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|..||.+.........+...+..                            .....+
T Consensus       175 ~~~-~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  225 (285)
T cd05605         175 NER-YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE----------------------------DQEEYS  225 (285)
T ss_pred             CCC-CCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh----------------------------cccccC
Confidence            765 899999999999999999999999887654443333221100                            011233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+||     ++.++++||||..
T Consensus       226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         226 EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            45788899999999999999999     9999999999976

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0695|consensus

Probab=99.96  E-value=4.4e-30  Score=227.15  Aligned_cols=173  Identities=23%  Similarity=0.312  Sum_probs=141.5

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +.+.++++.+++|.++|..||.|||.+|||+||||.+|+|+++.|++||+|+|++..-.. .....+++|||+.|.|||+
T Consensus       344 rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~-~gd~tstfcgtpnyiapei  422 (593)
T KOG0695|consen  344 RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG-PGDTTSTFCGTPNYIAPEI  422 (593)
T ss_pred             hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC-CCcccccccCCCcccchhh
Confidence            456799999999999999999999999999999999999999999999999999875322 3455677899999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCC--C-----ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQA--Q-----SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~--~-----~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      +.|.. |+.++|+|++|++||||+.|+.||.-  .     +..+.+-+++                              
T Consensus       423 lrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi------------------------------  471 (593)
T KOG0695|consen  423 LRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI------------------------------  471 (593)
T ss_pred             hcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH------------------------------
Confidence            99986 99999999999999999999999952  1     2222222221                              


Q ss_pred             ccchhhccCCCCCHHHHHHHHHccccCCCCCc------CHHHHHcCCccccCccccccc
Q psy2865         230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRI------SVNSALCHPYLDEGRLRFHSC  282 (395)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~------ta~e~L~Hp~f~~~~~~~~~~  282 (395)
                       ++.-..++...+..+...|...|..||.+|.      ..+++..|+||....+.....
T Consensus       472 -lekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leq  529 (593)
T KOG0695|consen  472 -LEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQ  529 (593)
T ss_pred             -hhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhh
Confidence             1122345566777888999999999999997      478999999998766655443

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=1.4e-30  Score=240.90  Aligned_cols=165  Identities=22%  Similarity=0.313  Sum_probs=132.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.||+||||||+||+++.++.++|+|||++.....  .......+||..|+|||++.
T Consensus        97 ~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~--~~~~~~~~g~~~y~aPE~~~  174 (285)
T cd05630          97 AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRVGTVGYMAPEVVK  174 (285)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC--CccccCCCCCccccChHHHc
Confidence            4588888999999999999999999999999999999999999999999999976432  12234457899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|.+||.+.........+...+..                            .....+
T Consensus       175 ~~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  225 (285)
T cd05630         175 NER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----------------------------VQEEYS  225 (285)
T ss_pred             CCC-CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh----------------------------hhhhcC
Confidence            876 899999999999999999999999875432111111110000                            001233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||+.||.+|+|     +.++++||||..
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         226 EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            456788999999999999999999     999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.96  E-value=3.8e-30  Score=237.42  Aligned_cols=190  Identities=34%  Similarity=0.489  Sum_probs=150.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++...... ....+..+++..|+|||++.
T Consensus        94 ~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~  172 (283)
T cd07835          94 TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEILL  172 (283)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC-ccccCccccccCCCCCceee
Confidence            35788888999999999999999999999999999999999999999999999765322 12234446788999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+....+..+.+.++.|....|............ ...  ..........
T Consensus       173 ~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~  249 (283)
T cd07835         173 GSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT-FPK--WARQDLSKVV  249 (283)
T ss_pred             cCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhh-ccc--ccccchhhhc
Confidence            7555788999999999999999999999999888888888888888887776554222111000 000  0011112234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+..+.+||.+||..||.+|||+.+++.||||
T Consensus       250 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         250 PNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            5677899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=1.6e-30  Score=256.98  Aligned_cols=165  Identities=20%  Similarity=0.231  Sum_probs=137.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....... ......+||+.|+|||+
T Consensus       163 ~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~  242 (478)
T PTZ00267        163 HLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPEL  242 (478)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhH
Confidence            34578888889999999999999999999999999999999999999999999987543211 22345679999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++||||+||++|+|++|..||.+.+..+.+..+...  .                             ...
T Consensus       243 ~~~~~-~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~--~-----------------------------~~~  290 (478)
T PTZ00267        243 WERKR-YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG--K-----------------------------YDP  290 (478)
T ss_pred             hCCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--C-----------------------------CCC
Confidence            98765 899999999999999999999999887766655554321  0                             012


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .+...+..+.+||.+||..||+.|||+.++|.|+|+..
T Consensus       291 ~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        291 FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            23456788999999999999999999999999999854

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.96  E-value=2.9e-30  Score=238.22  Aligned_cols=190  Identities=29%  Similarity=0.410  Sum_probs=151.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++...... .......++|..|++||++.
T Consensus        95 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~y~~PE~~~  173 (284)
T cd07836          95 GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP-VNTFSNEVVTLWYRAPDVLL  173 (284)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC-ccccccccccccccChHHhc
Confidence            35788888999999999999999999999999999999999999999999999765432 12234457788999999988


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+....+.|....|........... .  ...........+.
T Consensus       174 ~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~  250 (284)
T cd07836         174 GSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP-T--FPRYPPQDLQQLF  250 (284)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc-c--ccCCChHHHHHHh
Confidence            765578999999999999999999999999998888888888888888776655431111100 0  0000001112233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+..+.+||.+||+.||.+|||+.++++||||
T Consensus       251 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         251 PHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             hhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            4567889999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0983|consensus

Probab=99.96  E-value=2.2e-30  Score=223.26  Aligned_cols=165  Identities=21%  Similarity=0.247  Sum_probs=136.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..++|+.+-.+.-.++.||.||-. +||||||+||+|||+|..|.|||||||++..+.+.  ...+...|.+.|||||.+
T Consensus       186 ~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS--kAhtrsAGC~~YMaPERi  263 (391)
T KOG0983|consen  186 GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS--KAHTRSAGCAAYMAPERI  263 (391)
T ss_pred             CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc--cccccccCCccccCcccc
Confidence            458888888899999999999985 59999999999999999999999999999776542  233445788999999988


Q ss_pred             hc--CCCCCccchHHhHHHHHHHHHcCCCCCCCC-ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         158 MG--ARHYSAAVDVWSVGCIFAELLGRRILFQAQ-SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       158 ~~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~-~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      --  .+.|+..+||||||++++||+||..||.+. .+.+.+..|..  ..|+                           .
T Consensus       264 dp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln--~ePP---------------------------~  314 (391)
T KOG0983|consen  264 DPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN--EEPP---------------------------L  314 (391)
T ss_pred             CCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh--cCCC---------------------------C
Confidence            42  345999999999999999999999999985 46777777765  1121                           0


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......++++|.+|+..||+.|+.+||...++|+|||+..
T Consensus       315 L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  315 LPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR  354 (391)
T ss_pred             CCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence            1112348999999999999999999999999999999853

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.96  E-value=5.7e-30  Score=236.55  Aligned_cols=192  Identities=27%  Similarity=0.396  Sum_probs=147.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||+.|++|+||+|+||+++.++.++|+|||++...... ....+..+++..|+|||++.
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07846          95 NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-GEVYTDYVATRWYRAPELLV  173 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC-ccccCcccceeeccCcHHhc
Confidence            45788888999999999999999999999999999999999999999999999865432 23344567899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|||||||++|+|++|.++|.+.+..+.+..+....+..................... .............
T Consensus       174 ~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  252 (286)
T cd07846         174 GDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL-PEVKEIEPLEKRF  252 (286)
T ss_pred             cccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccc-ccccCcchHHHhC
Confidence            755578899999999999999999999998888888888877666544322111110000000000 0011111222345


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+..+.+|+.+||..+|++|||+.++|+||||
T Consensus       253 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         253 PKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            6778999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.96  E-value=2.7e-30  Score=238.52  Aligned_cols=192  Identities=31%  Similarity=0.453  Sum_probs=150.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||..|++|+||+|+||+++.++.++|+|||++...........+...++..|+|||++.
T Consensus        95 ~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  174 (287)
T cd07840          95 VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLL  174 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeE
Confidence            46788888999999999999999999999999999999999999999999999876543222234456788999999887


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|||||||++|+|++|..||.+.+....+..+....+.+....|+.............  .......+....
T Consensus       175 ~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  252 (287)
T cd07840         175 GATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP--KKPYKRRLREFF  252 (287)
T ss_pred             ccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc--cccchhHHHHHh
Confidence            655588999999999999999999999999998888888888888887776654322210000000  000001111222


Q ss_pred             CC-CCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQ-ATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~-~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .. .+..+.+||.+||..||.+|||+.+++.||||
T Consensus       253 ~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         253 KHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            23 48899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.96  E-value=4.5e-30  Score=239.19  Aligned_cols=192  Identities=29%  Similarity=0.473  Sum_probs=149.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++...............++..|+|||++.
T Consensus       111 ~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  190 (302)
T cd07864         111 VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLL  190 (302)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhc
Confidence            45788889999999999999999999999999999999999999999999999865432222223345678899999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++++|++|.++|...+....+..+....+.+.+..++...............  ..........
T Consensus       191 ~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  268 (302)
T cd07864         191 GEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKK--QYRRRLREEF  268 (302)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccccccc--ccccchhhhc
Confidence            65557899999999999999999999999988888899998888888876665442211110000000  0001111223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...+..+.+||.+||..||.+|||+.+++.||||
T Consensus       269 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         269 SFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            3467889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.96  E-value=4.9e-30  Score=238.14  Aligned_cols=190  Identities=35%  Similarity=0.509  Sum_probs=147.2

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      +++..+..++.||+.||.|||..|++|+||+|+||+++. ++.+||+|||++...... ....+..+++..|+|||++.+
T Consensus        99 ~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~  177 (294)
T PLN00009         99 KNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-VRTFTHEVVTLWYRAPEILLG  177 (294)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC-ccccccCceeecccCHHHHhC
Confidence            456667788999999999999999999999999999985 567999999999765332 223344577899999999877


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      ...++.++||||+||++|+|++|.+||.+.+..+.+..+...++.|....|............. .  ...........+
T Consensus       178 ~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~  254 (294)
T PLN00009        178 SRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF-P--KWPPKDLATVVP  254 (294)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc-c--cCCCCCHHHhCc
Confidence            5557899999999999999999999999988888888888888888776665331111100000 0  000111222345


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++.+.+|+.+||..||++||++.++|.||||..
T Consensus       255 ~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~  289 (294)
T PLN00009        255 TLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD  289 (294)
T ss_pred             CCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence            67888999999999999999999999999999976

>KOG0192|consensus

Probab=99.96  E-value=4.3e-30  Score=241.02  Aligned_cols=161  Identities=24%  Similarity=0.300  Sum_probs=134.7

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccC-ccccCCCCCceeecCCC-CeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDG-YQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      +...++...+..++-||+.|+.|||+.+ ||||||||+|||++.++ .+||||||+++...... ..++...||..||||
T Consensus       135 ~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~~~~~~GT~~wMAP  213 (362)
T KOG0192|consen  135 RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TSMTSVAGTYRWMAP  213 (362)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-ccccCCCCCccccCh
Confidence            5678899999999999999999999999 99999999999999997 99999999999865321 445667999999999


Q ss_pred             hhhhcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         155 EILMGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       155 Evl~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      |++.+. ..|+.++||||||+++|||+||..||.+.........+... +                             .
T Consensus       214 Ev~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~-~-----------------------------~  263 (362)
T KOG0192|consen  214 EVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG-G-----------------------------L  263 (362)
T ss_pred             hhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-C-----------------------------C
Confidence            999842 34999999999999999999999999998874444443321 1                             1


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...++...++.+..|+..||.-||..||+..+++.
T Consensus       264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            11344558889999999999999999999998864

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.96  E-value=1.3e-29  Score=240.53  Aligned_cols=193  Identities=26%  Similarity=0.434  Sum_probs=143.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCCCC--CCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.|+.|||+.||+||||+|+||+++ .++.++|+|||+++.......  ......+++..|+|||
T Consensus       109 ~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  188 (342)
T cd07854         109 GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPR  188 (342)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHH
Confidence            4588899999999999999999999999999999999998 456789999999986532111  1122346788999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh-hccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML-RQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  234 (395)
                      ++.+...++.++|||||||++|+|++|..||.+.+....+..+......+................. .....   ....
T Consensus       189 ~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  265 (342)
T cd07854         189 LLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEP---RRPL  265 (342)
T ss_pred             HHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhccccc---CCCH
Confidence            8876555889999999999999999999999988887777776665544444333222111110000 00011   1112


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+..+..+.+||.+||..||.+|||+.++|.||||..
T Consensus       266 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         266 RDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             HHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            2334567889999999999999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.96  E-value=5.4e-30  Score=242.45  Aligned_cols=193  Identities=34%  Similarity=0.486  Sum_probs=152.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-------------CCCCccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-------------PNKAMTQ  144 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-------------~~~~~~~  144 (395)
                      ...+++..+..++.|++.||.|||..||+|+||+|+||+++.++.++|+|||++......             .....+.
T Consensus       113 ~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (335)
T PTZ00024        113 KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTS  192 (335)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccc
Confidence            345788889999999999999999999999999999999999999999999999865411             1112233


Q ss_pred             ccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc
Q psy2865         145 EVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ  224 (395)
Q Consensus       145 ~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  224 (395)
                      ..++..|+|||++.+...++.++|+||+||++|+|++|.+||.+.+..+++..+...++.|....|+..........   
T Consensus       193 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---  269 (335)
T PTZ00024        193 KVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTE---  269 (335)
T ss_pred             cccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccc---
Confidence            46788999999998765579999999999999999999999999999999999999888887765543311110000   


Q ss_pred             cccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         225 TRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ................+..+.+||.+||..+|++|||++++|.||||..
T Consensus       270 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~  318 (335)
T PTZ00024        270 -FTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS  318 (335)
T ss_pred             -cCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCC
Confidence             0000011122334566888999999999999999999999999999976

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-29  Score=233.40  Aligned_cols=190  Identities=35%  Similarity=0.490  Sum_probs=152.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||..||+|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~~~aPE~~~  171 (282)
T cd07829          93 GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP-LRTYTHEVVTLWYRAPEILL  171 (282)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCC-ccccCccccCcCcCChHHhc
Confidence            46888888999999999999999999999999999999999999999999999865432 22334456788899999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++++|++|.++|.+.+....+..+...++.+....|.............. .  ..........
T Consensus       172 ~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~  248 (282)
T cd07829         172 GSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP-K--FPPKDLEKVL  248 (282)
T ss_pred             CCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc-c--cCccchHHhc
Confidence            764589999999999999999999999999999999999999999998887766533321000000 0  0001111223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+..+.+||.+||..||++|||+.+++.||||
T Consensus       249 ~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         249 PRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             ccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            4457889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.2e-30  Score=232.87  Aligned_cols=163  Identities=20%  Similarity=0.245  Sum_probs=132.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC--cccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~--~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.|+.|||..||+|+||+|+||+++.++.++|+|||++..........  .....++..|+|||+
T Consensus        99 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  178 (263)
T cd06625          99 GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEV  178 (263)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcce
Confidence            457778888999999999999999999999999999999999999999999987643211111  134567889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++||||+||++|+|++|..||...+.......+....                              ....
T Consensus       179 ~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~------------------------------~~~~  227 (263)
T cd06625         179 ISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP------------------------------TNPQ  227 (263)
T ss_pred             eccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccC------------------------------CCCC
Confidence            98876 8999999999999999999999998765544433322110                              1123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ++...+..+.+||.+||..+|.+|||+.++|.||||
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            445678889999999999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=7.1e-30  Score=241.19  Aligned_cols=170  Identities=20%  Similarity=0.242  Sum_probs=134.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+|..............+||+.|+|||++.
T Consensus        97 ~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05624          97 DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQ  176 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHh
Confidence            46788888999999999999999999999999999999999999999999999865433222233457999999999987


Q ss_pred             cC----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         159 GA----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       159 ~~----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +.    ..++.++||||+||++|+|++|..||.+.+..+.+..|.......                           .+
T Consensus       177 ~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---------------------------~~  229 (331)
T cd05624         177 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF---------------------------QF  229 (331)
T ss_pred             ccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc---------------------------cC
Confidence            52    237889999999999999999999999887766666554211100                           00


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCC--CcCHHHHHcCCccccC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTK--RISVNSALCHPYLDEG  275 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~--R~ta~e~L~Hp~f~~~  275 (395)
                      .......+..+.+||.+||..++.+  |+++++++.||||...
T Consensus       230 p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         230 PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            1112346789999999999976654  4699999999999764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0603|consensus

Probab=99.96  E-value=8.2e-31  Score=250.06  Aligned_cols=158  Identities=24%  Similarity=0.311  Sum_probs=134.3

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      .+...+.+...+++...++.|++.+|..||+|||+|++||+++.+|++++.|||+++.....     ...|||..|||||
T Consensus        89 ~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~-----~~~cgt~eymApE  163 (612)
T KOG0603|consen   89 SKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE-----KIACGTYEYRAPE  163 (612)
T ss_pred             ccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhh-----hhcccchhhhhhH
Confidence            45677888899999999999999999999999999999999999999999999999875321     1229999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.|   +..++|+||+|+++|+|++|..+|.+    +.+..|..                                ...
T Consensus       164 I~~g---h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~--------------------------------~~~  204 (612)
T KOG0603|consen  164 IING---HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILK--------------------------------AEL  204 (612)
T ss_pred             hhhc---cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhh--------------------------------hcc
Confidence            9983   57899999999999999999999988    55555543                                123


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCcc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGRL  277 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~~  277 (395)
                      .++...++.+.+++..|+..+|..|..     +.++++|+||....+
T Consensus       205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~  251 (612)
T KOG0603|consen  205 EMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW  251 (612)
T ss_pred             CCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence            455677888999999999999999985     579999999976543

>KOG0607|consensus

Probab=99.96  E-value=1.1e-29  Score=223.13  Aligned_cols=173  Identities=20%  Similarity=0.300  Sum_probs=134.2

Q ss_pred             HHHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC---CCeEEeeCCcccccCCC------CCCCccc
Q psy2865          74 KKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT---YSSKICDFGLARVEEPD------PNKAMTQ  144 (395)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~---~~vKl~DFGla~~~~~~------~~~~~~~  144 (395)
                      .-++.+.|+|..++.++.+|+.||.+||..||.||||||+|||-...   .-||||||.++......      ....+.+
T Consensus       166 hI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~t  245 (463)
T KOG0607|consen  166 HIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLT  245 (463)
T ss_pred             HHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccC
Confidence            34667899999999999999999999999999999999999999754   45899999887643211      1123455


Q ss_pred             ccccccccchhhhh---c-CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh---------------HHHHHHHhcCCC
Q psy2865         145 EVVTQYYRAPEILM---G-ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ---------------QLGLITDLLGTP  205 (395)
Q Consensus       145 ~~~t~~y~aPEvl~---~-~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~---------------~l~~i~~~~g~~  205 (395)
                      .||+..||||||+.   + ...|+..+|.||||+|+|-|++|.+||.|....+               .+..|.+..-..
T Consensus       246 PvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeF  325 (463)
T KOG0607|consen  246 PVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEF  325 (463)
T ss_pred             cccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcC
Confidence            68999999999873   2 2348999999999999999999999998864321               122222211111


Q ss_pred             CHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         206 TPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      |..                            -|..++.++.||++.+|..|+..|.+|.++|+|||+..
T Consensus       326 Pdk----------------------------dWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~  366 (463)
T KOG0607|consen  326 PDK----------------------------DWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQR  366 (463)
T ss_pred             Chh----------------------------hhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence            111                            22456889999999999999999999999999999975

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.96  E-value=1.2e-29  Score=230.61  Aligned_cols=161  Identities=26%  Similarity=0.315  Sum_probs=133.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++...... ........+++.|+|||++.
T Consensus        97 ~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  175 (257)
T cd08223          97 KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ-CDMASTLIGTPYYMSPELFS  175 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc-CCccccccCCcCccChhHhc
Confidence            45788888999999999999999999999999999999999999999999999865332 22334457889999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+||+||++++|++|..||.+.+.......+...  .                             ....+
T Consensus       176 ~~~-~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~--~-----------------------------~~~~~  223 (257)
T cd08223         176 NKP-YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG--K-----------------------------LPPMP  223 (257)
T ss_pred             CCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--C-----------------------------CCCCc
Confidence            765 889999999999999999999999877654443333221  0                             01223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...++.+.+||.+||..||..|||+.+++.||||
T Consensus       224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         224 KDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             cccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            4567889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.96  E-value=1.4e-29  Score=233.87  Aligned_cols=185  Identities=36%  Similarity=0.509  Sum_probs=145.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......  ......+++..|+|||++.+
T Consensus       103 ~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~PE~~~~  180 (287)
T cd07838         103 GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE--MALTSVVVTLWYRAPEVLLQ  180 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC--cccccccccccccChHHhcc
Confidence            5788889999999999999999999999999999999999999999999999875432  22334467889999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|+||+||++|+|++|.++|.+.+..+.+..+.+..+.+....+..........     .............+
T Consensus       181 ~~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  254 (287)
T cd07838         181 SS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSS-----FPSYTPRSFKSFVP  254 (287)
T ss_pred             CC-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhh-----cccccccchhhhhh
Confidence            76 8999999999999999999999999999888888888776665543332111000000     00000011122234


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ..++.+.+||.+||..||.+|||+.++|.||||
T Consensus       255 ~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         255 EICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             hhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            557888999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=6.9e-30  Score=235.22  Aligned_cols=166  Identities=20%  Similarity=0.222  Sum_probs=130.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||+.||+||||||+||+++.++.++|+|||++......  .......+|..|+|||++.
T Consensus        90 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~  167 (277)
T cd05607          90 RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQRAGTNGYMAPEILK  167 (277)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeeccCCCCCccCHHHHc
Confidence            34677777889999999999999999999999999999999999999999999765421  2233457899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHH-hcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITD-LLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++|..||.+.........+.. .+..                            .....
T Consensus       168 ~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  218 (277)
T cd05607         168 EEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED----------------------------EVKFE  218 (277)
T ss_pred             cCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc----------------------------ccccc
Confidence            876 89999999999999999999999976543211111111 0000                            00001


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH----HHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV----NSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta----~e~L~Hp~f~~~  275 (395)
                      ....+..+.+||.+||..||.+|||+    ++++.||||...
T Consensus       219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence            13567889999999999999999999    678899999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=2.3e-29  Score=232.08  Aligned_cols=190  Identities=35%  Similarity=0.484  Sum_probs=151.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++......  ...+..+++..|+|||++.
T Consensus        94 ~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~  171 (283)
T cd07830          94 KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--PPYTDYVSTRWYRAPEILL  171 (283)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC--CCcCCCCCcccccCceeee
Confidence            46788888999999999999999999999999999999999999999999999865422  2234567899999999986


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|+|||||++++|++|.++|.+.+..+.+..+...++.+....|..............  .......+....
T Consensus       172 ~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  249 (283)
T cd07830         172 RSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF--PQFAPTSLHQLI  249 (283)
T ss_pred             cCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc--cccccccHHHHc
Confidence            655578999999999999999999999999999999999999999988776654322111100000  000011122333


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+..+.+||.+||..||++|||+.|++.||||
T Consensus       250 ~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         250 PNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            4457889999999999999999999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.96  E-value=1e-29  Score=233.19  Aligned_cols=163  Identities=18%  Similarity=0.206  Sum_probs=129.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|++|||+.||+|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus       106 ~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~g~~~y~aPE~~~  184 (272)
T cd06637         106 NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-VGRRNTFIGTPYWMAPEVIA  184 (272)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccc-cccCCcccccccccCHhHhc
Confidence            45777888889999999999999999999999999999999999999999999865322 12334567899999999986


Q ss_pred             cC----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         159 GA----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       159 ~~----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +.    ..|+.++||||+||++|+|++|..||...........+....                              ..
T Consensus       185 ~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~------------------------------~~  234 (272)
T cd06637         185 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP------------------------------AP  234 (272)
T ss_pred             cccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC------------------------------CC
Confidence            32    237889999999999999999999997655433322221100                              00


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .......+..+.+||.+||..||.+|||+.+++.||||
T Consensus       235 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         235 RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            01123456789999999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=9.4e-30  Score=235.30  Aligned_cols=165  Identities=21%  Similarity=0.292  Sum_probs=135.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++.....  ........|+..|+|||++.+
T Consensus        98 ~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~--~~~~~~~~g~~~~~aPE~~~~  175 (285)
T cd05632          98 GFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE--GESIRGRVGTVGYMAPEVLNN  175 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC--CCcccCCCCCcCccChHHhcC
Confidence            588999999999999999999999999999999999999999999999999976432  122344578999999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|+||+||++|+|++|.+||.+.........+......                            .....+.
T Consensus       176 ~~-~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  226 (285)
T cd05632         176 QR-YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLE----------------------------TEEVYSA  226 (285)
T ss_pred             CC-CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhc----------------------------cccccCc
Confidence            65 899999999999999999999999887654444433221100                            0112335


Q ss_pred             CCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccC
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEG  275 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~  275 (395)
                      ..+..+.+|+..||..||.+|||     +.+++.|+||...
T Consensus       227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         227 KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            56788999999999999999999     8999999999763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.96  E-value=8.8e-30  Score=234.78  Aligned_cols=166  Identities=21%  Similarity=0.210  Sum_probs=132.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++......   ......+|..|+|||++
T Consensus        91 ~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~  167 (279)
T cd05633          91 HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAPEVL  167 (279)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc---CccCcCCCcCccCHHHh
Confidence            346888999999999999999999999999999999999999999999999999754321   22335789999999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|..||.+....... .+.....                            .....+
T Consensus       168 ~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~----------------------------~~~~~~  218 (279)
T cd05633         168 QKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL----------------------------TVNVEL  218 (279)
T ss_pred             cCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhh----------------------------cCCcCC
Confidence            74344889999999999999999999999764322111 1111000                            001123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+|+     |+.++++||||...
T Consensus       219 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         219 PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence            456788999999999999999999     69999999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0608|consensus

Probab=99.96  E-value=3.4e-30  Score=244.02  Aligned_cols=172  Identities=20%  Similarity=0.288  Sum_probs=139.0

Q ss_pred             HHHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCccccc---CCC-----CCC-----
Q psy2865          74 KKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVE---EPD-----PNK-----  140 (395)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~---~~~-----~~~-----  140 (395)
                      -.-|.+-|.|.-++||++++.+|+.+.|.+|+|||||||+|||||.+|+|||+||||+..+   .+.     +++     
T Consensus       719 LLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDS  798 (1034)
T KOG0608|consen  719 LLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDS  798 (1034)
T ss_pred             HHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCcccccc
Confidence            4466889999999999999999999999999999999999999999999999999998532   110     000     


Q ss_pred             ----------------------------CcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH
Q psy2865         141 ----------------------------AMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV  192 (395)
Q Consensus       141 ----------------------------~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~  192 (395)
                                                  .....+||+.|+|||||...+ |+..+|+||+|||||||+.|.+||...+..
T Consensus       799 mep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g-~~q~cdwws~gvil~em~~g~~pf~~~tp~  877 (1034)
T KOG0608|consen  799 MEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG-YTQLCDWWSVGVILYEMLVGQPPFLADTPG  877 (1034)
T ss_pred             CCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC-ccccchhhHhhHHHHHHhhCCCCccCCCCC
Confidence                                        011238999999999999876 999999999999999999999999988776


Q ss_pred             hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc--cCCCCCHHHHHHHHHccccCCCCCc---CHHHHH
Q psy2865         193 QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS--LSSQATGEAVHLLVQMLYFDPTKRI---SVNSAL  267 (395)
Q Consensus       193 ~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dll~~mL~~dP~~R~---ta~e~L  267 (395)
                      +...+|..                              |+.+..  .-.+++.++.+||.++.. +++.|+   .++|+.
T Consensus       878 ~tq~kv~n------------------------------w~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vK  926 (1034)
T KOG0608|consen  878 ETQYKVIN------------------------------WRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVK  926 (1034)
T ss_pred             cceeeeee------------------------------hhhccccccccccCHHHHHHHHHHhc-Chhhhhcccchhhhh
Confidence            65555432                              112222  234688999999998765 689998   478899


Q ss_pred             cCCccccCcc
Q psy2865         268 CHPYLDEGRL  277 (395)
Q Consensus       268 ~Hp~f~~~~~  277 (395)
                      .||||.+.++
T Consensus       927 aHpfFkgIDf  936 (1034)
T KOG0608|consen  927 AHPFFKGIDF  936 (1034)
T ss_pred             cCccccccch
Confidence            9999987654

>KOG0577|consensus

Probab=99.96  E-value=3.6e-30  Score=242.22  Aligned_cols=161  Identities=21%  Similarity=0.219  Sum_probs=137.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .+.+.+..++.+..+.+.||+|||+.+.||||||..|||++..|.|||+|||.|....     ...++||||+|||||||
T Consensus       120 kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~-----PAnsFvGTPywMAPEVI  194 (948)
T KOG0577|consen  120 KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA-----PANSFVGTPYWMAPEVI  194 (948)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-----chhcccCCccccchhHh
Confidence            4567788889999999999999999999999999999999999999999999998754     35678999999999999


Q ss_pred             hc--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MG--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.  .+.|+-++||||||+++.||+-++||+.+.+.+..|..|..--. |.                        +    
T Consensus       195 LAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNes-Pt------------------------L----  245 (948)
T KOG0577|consen  195 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PT------------------------L----  245 (948)
T ss_pred             eeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCC-CC------------------------C----
Confidence            63  34699999999999999999999999888888888887754211 00                        0    


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                       -...-+..|+.|+..||..-|.+|||++++|.|+|+.
T Consensus       246 -qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~  282 (948)
T KOG0577|consen  246 -QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVL  282 (948)
T ss_pred             -CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence             0233466899999999999999999999999999974

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.2e-29  Score=236.30  Aligned_cols=167  Identities=22%  Similarity=0.287  Sum_probs=135.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-------------------  139 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-------------------  139 (395)
                      ..+++..+..++.||+.||.|||..|++|+||||+||+++.++.++|+|||++........                   
T Consensus        98 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (316)
T cd05574          98 KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIP  177 (316)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccc
Confidence            5678888889999999999999999999999999999999999999999999875432110                   


Q ss_pred             ---------CCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHH
Q psy2865         140 ---------KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEM  210 (395)
Q Consensus       140 ---------~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~  210 (395)
                               ......+||..|+|||++.+.. ++.++|||||||++|+|++|..||.+.+....+..+...-.       
T Consensus       178 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-------  249 (316)
T cd05574         178 SETFSEEPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEV-------  249 (316)
T ss_pred             hhhhcccccCCCCCCcCccCCcCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCc-------
Confidence                     0112347889999999998876 89999999999999999999999998877665554432100       


Q ss_pred             HhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcC----HHHHHcCCccccCc
Q psy2865         211 RHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRIS----VNSALCHPYLDEGR  276 (395)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t----a~e~L~Hp~f~~~~  276 (395)
                                             .+......+..+.+||.+||..||++|||    ++++|.||||.+..
T Consensus       250 -----------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         250 -----------------------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             -----------------------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence                                   01111226789999999999999999999    99999999998743

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=9.2e-30  Score=240.58  Aligned_cols=193  Identities=17%  Similarity=0.181  Sum_probs=132.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      +.+++..+..++.|++.|+.|||+. +|+||||||+|||++.++.+||+|||++.....   ......++|..|+|||++
T Consensus        98 ~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---~~~~~~~~~~~y~aPE~~  174 (333)
T cd06650          98 GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERL  174 (333)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh---hccccCCCCccccCHHHh
Confidence            4577788889999999999999974 799999999999999999999999999976432   123345789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHH-HhcCCCCHHHHHhhhhhhhhhhhhccccCCccc---h
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLIT-DLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS---S  233 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  233 (395)
                      .+.. ++.++|||||||++|+|++|..||...........+. ...|.+...........................   .
T Consensus       175 ~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (333)
T cd06650         175 QGTH-YSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFE  253 (333)
T ss_pred             cCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHH
Confidence            8765 8999999999999999999999998765533322211 111111111000000000000000000000000   0


Q ss_pred             ---------hhcc-CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         234 ---------LYSL-SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       234 ---------~~~~-~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                               .... ....+.++.+||.+||.+||++|||+.++|.||||...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         254 LLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             HHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence                     0000 12356789999999999999999999999999999763

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.96  E-value=6.2e-30  Score=232.69  Aligned_cols=169  Identities=27%  Similarity=0.382  Sum_probs=135.8

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +...+++..+..++.||+.||.+||+.||+|+||+|+||+++.++.++|+|||++..... ........++|..|+|||+
T Consensus        91 ~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-~~~~~~~~~~~~~y~aPE~  169 (260)
T PF00069_consen   91 KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-NNENFNPFVGTPEYMAPEV  169 (260)
T ss_dssp             HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-TTSEBSSSSSSGGGSCHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccc
Confidence            567789999999999999999999999999999999999999999999999999975321 2344566788999999999


Q ss_pred             hh-cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LM-GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~-~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +. +.. ++.++||||+||++++|++|..||......+....+...+......                         ..
T Consensus       170 ~~~~~~-~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~  223 (260)
T PF00069_consen  170 LQQGKK-YTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS-------------------------SS  223 (260)
T ss_dssp             HTTTSS-BSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH-------------------------HT
T ss_pred             cccccc-ccccccccccccccccccccccccccccchhhhhhhhhcccccccc-------------------------cc
Confidence            88 544 8999999999999999999999999875555555444322211100                         00


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .........+.+||.+||..||++|||+.++++||||
T Consensus       224 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  224 QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             cccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            0111223789999999999999999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.96  E-value=2.8e-29  Score=231.62  Aligned_cols=166  Identities=18%  Similarity=0.221  Sum_probs=133.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++...... ........+|..|+|||++.
T Consensus        98 ~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  176 (282)
T cd06643          98 RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-ccccccccccccccCHhhcc
Confidence            45788889999999999999999999999999999999999999999999998764321 22234457899999999984


Q ss_pred             c----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         159 G----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       159 ~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +    ...++.++||||+||++|+|++|.+||...+....+..+......                             .
T Consensus       177 ~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~  227 (282)
T cd06643         177 CETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP-----------------------------T  227 (282)
T ss_pred             ccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC-----------------------------C
Confidence            2    223778999999999999999999999887765554444321100                             0


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+...+..+.+||.+||..||.+|||+.++++||||..
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  267 (282)
T cd06643         228 LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV  267 (282)
T ss_pred             CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence            1123345778999999999999999999999999999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.96  E-value=2.2e-29  Score=233.61  Aligned_cols=164  Identities=21%  Similarity=0.304  Sum_probs=134.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.|+.|||+.||+||||+|.||+++.++.++|+|||++...... .......+++..|+|||++.+
T Consensus       114 ~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~  192 (292)
T cd06658         114 RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE-VPKRKSLVGTPYWMAPEVISR  192 (292)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc-cccCceeecCccccCHHHHcc
Confidence            4778888999999999999999999999999999999999999999999998764322 122334578999999999977


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|+||+||++|+|++|..||.+.+....+..+...+..                             ......
T Consensus       193 ~~-~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  242 (292)
T cd06658         193 LP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-----------------------------RVKDSH  242 (292)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-----------------------------cccccc
Confidence            65 899999999999999999999999887765554443321110                             011123


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..+.+||.+||..||.+|||+.++++||||..
T Consensus       243 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~  277 (292)
T cd06658         243 KVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL  277 (292)
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence            46778999999999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.96  E-value=1.7e-29  Score=233.03  Aligned_cols=163  Identities=20%  Similarity=0.226  Sum_probs=128.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||+.||+|+||+|+||+++.++.++|+|||++....... ......+++..|+|||++.
T Consensus       116 ~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~  194 (282)
T cd06636         116 NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIA  194 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc-cCCCcccccccccCHhhcC
Confidence            346677788899999999999999999999999999999999999999999987643211 2234457899999999986


Q ss_pred             c----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         159 G----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       159 ~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      .    ...++.++|+|||||++|+|++|.+||........+..+...   ..                           .
T Consensus       195 ~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~---------------------------~  244 (282)
T cd06636         195 CDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PP---------------------------P  244 (282)
T ss_pred             cccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---CC---------------------------C
Confidence            3    223788999999999999999999999765543333222110   00                           0


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .......+..+.+||.+||..||.+|||+.++|.||||
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         245 KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            01123467889999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0574|consensus

Probab=99.96  E-value=5.4e-31  Score=229.78  Aligned_cols=168  Identities=18%  Similarity=0.241  Sum_probs=140.3

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      -|.+.|+++.+..+++..+.||.|||...-||||||..|||++.+|..||+|||.|..+.+.- ....+.+||+.|||||
T Consensus       121 ~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPE  199 (502)
T KOG0574|consen  121 ARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPE  199 (502)
T ss_pred             HhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhH-HhhCccccCcccccHH
Confidence            456789999999999999999999999999999999999999999999999999998775432 2345579999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      |+...+ |+..+||||||++..||+.|++||....+...+-.|   -..|++                          .+
T Consensus       200 VI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI---PT~PPP--------------------------TF  249 (502)
T KOG0574|consen  200 VIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI---PTKPPP--------------------------TF  249 (502)
T ss_pred             HHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccceeEec---cCCCCC--------------------------CC
Confidence            999887 999999999999999999999999765544332222   112222                          12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..-+.+|.||+++||..+|++|.||-++++|||+.+
T Consensus       250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fikn  288 (502)
T KOG0574|consen  250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKN  288 (502)
T ss_pred             CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcC
Confidence            334445678999999999999999999999999999865

>KOG4645|consensus

Probab=99.96  E-value=2.4e-30  Score=262.26  Aligned_cols=170  Identities=17%  Similarity=0.203  Sum_probs=140.0

Q ss_pred             HHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC---CCCcccccccccc
Q psy2865          75 KEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP---NKAMTQEVVTQYY  151 (395)
Q Consensus        75 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~---~~~~~~~~~t~~y  151 (395)
                      -+.++..+|...+.|..|++.|++|||..|||||||||.||+++.+|.+|++|||.|.....+.   ........||+.|
T Consensus      1325 l~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~Y 1404 (1509)
T KOG4645|consen 1325 LEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMY 1404 (1509)
T ss_pred             HHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchh
Confidence            4556677888889999999999999999999999999999999999999999999998765432   1224467999999


Q ss_pred             cchhhhhcCC--CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         152 RAPEILMGAR--HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       152 ~aPEvl~~~~--~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      ||||+|.|..  ....++||||+||++.||+||+.||..-+..-++..-+...-.                         
T Consensus      1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~------------------------- 1459 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHK------------------------- 1459 (1509)
T ss_pred             cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCC-------------------------
Confidence            9999998643  2567999999999999999999999876655444333222111                         


Q ss_pred             ccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                           .++|...+++..|||.+||.-||..|++|.|+|.|.|-..
T Consensus      1460 -----Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1460 -----PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             -----CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence                 2345568899999999999999999999999999999764

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.96  E-value=3.5e-29  Score=230.66  Aligned_cols=166  Identities=21%  Similarity=0.211  Sum_probs=133.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.+|+||||+|+||+++.++.++|+|||++......   .....+||..|+|||++.
T Consensus        92 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~  168 (278)
T cd05606          92 GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAPEVLQ  168 (278)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---CCcCcCCCcCCcCcHHhc
Confidence            46888999999999999999999999999999999999999999999999998754321   223457899999999997


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|..||.+..............+                             ....++
T Consensus       169 ~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  219 (278)
T cd05606         169 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-----------------------------MAVELP  219 (278)
T ss_pred             CCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc-----------------------------cCCCCC
Confidence            554489999999999999999999999987632221111100000                             012234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      ...+..+.+||.+||..||.+|+     ++.++++||||....
T Consensus       220 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         220 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            45688999999999999999999     999999999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=3.7e-29  Score=237.03  Aligned_cols=158  Identities=18%  Similarity=0.225  Sum_probs=123.8

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....... .......+|..|+|||++.
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  249 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIF  249 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhh
Confidence            466677788999999999999999999999999999999999999999999986432211 1122334567899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. |+.++|||||||++|||++ |.+||.+......+...... |                             .....
T Consensus       250 ~~~-~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~-----------------------------~~~~~  298 (338)
T cd05102         250 DKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-G-----------------------------TRMRA  298 (338)
T ss_pred             cCC-CCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-C-----------------------------CCCCC
Confidence            765 8999999999999999996 99999876543332222110 0                             00122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...++.+.+||.+||..||.+|||+.++++
T Consensus       299 ~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         299 PENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3456788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=7.7e-29  Score=254.46  Aligned_cols=165  Identities=21%  Similarity=0.219  Sum_probs=130.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc-------CccccCCCCCceeecC-----------------CCCeEEeeCCcccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID-------GYQARQPTRQLVMYQA-----------------TYSSKICDFGLARV  133 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~-------~iiHrDlkp~Nil~~~-----------------~~~vKl~DFGla~~  133 (395)
                      ...+++..+..++.||+.||.|||..       +||||||||+||||+.                 .+.+||+|||++..
T Consensus       112 ~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~  191 (1021)
T PTZ00266        112 FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKN  191 (1021)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccc
Confidence            35688899999999999999999985       4999999999999964                 23489999999986


Q ss_pred             cCCCCCCCcccccccccccchhhhhcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHh
Q psy2865         134 EEPDPNKAMTQEVVTQYYRAPEILMGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRH  212 (395)
Q Consensus       134 ~~~~~~~~~~~~~~t~~y~aPEvl~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~  212 (395)
                      ....  ......+||+.|+|||++.+. ..++.++||||||||+|+|++|.+||...+...++..++..  .+.      
T Consensus       192 l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~--~p~------  261 (1021)
T PTZ00266        192 IGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKR--GPD------  261 (1021)
T ss_pred             cccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhc--CCC------
Confidence            5422  223445799999999999753 24789999999999999999999999876655443332210  000      


Q ss_pred             hhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         213 ACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                                             ......+..+.+||..||.++|.+|||+.|+|.||||...
T Consensus       262 -----------------------lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        262 -----------------------LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             -----------------------CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence                                   0113457889999999999999999999999999999753

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.95  E-value=6.6e-29  Score=230.36  Aligned_cols=167  Identities=19%  Similarity=0.218  Sum_probs=132.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||..|++||||+|+||+++.++.++|+|||++...... ........++..|+|||++
T Consensus       104 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~  182 (292)
T cd06644         104 DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-LQRRDSFIGTPYWMAPEVV  182 (292)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc-ccccceecCCccccCceee
Confidence            345788889999999999999999999999999999999999999999999998754321 2223445788999999998


Q ss_pred             hc----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MG----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .+    ...++.++|+|||||++|+|++|.+||...+....+..+...   ..                          .
T Consensus       183 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~--------------------------~  233 (292)
T cd06644         183 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EP--------------------------P  233 (292)
T ss_pred             ccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CC--------------------------c
Confidence            53    223678999999999999999999999876654443333211   00                          0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+...+..+.+||.+||..||++||++.++++||||..
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  274 (292)
T cd06644         234 TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS  274 (292)
T ss_pred             cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            01123456778999999999999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=5.2e-29  Score=231.63  Aligned_cols=164  Identities=23%  Similarity=0.289  Sum_probs=132.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.||+|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.+
T Consensus       112 ~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~  190 (296)
T cd06654         112 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRSTMVGTPYWMAPEVVTR  190 (296)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccc-ccccCcccCCccccCHHHHcC
Confidence            4677778889999999999999999999999999999999999999999998764322 122334578899999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|||||||++|+|++|.+||...+....+..+.. .+.+                            ....+.
T Consensus       191 ~~-~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~~----------------------------~~~~~~  240 (296)
T cd06654         191 KA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTP----------------------------ELQNPE  240 (296)
T ss_pred             CC-CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCCC----------------------------CCCCcc
Confidence            65 78999999999999999999999987765444333221 1110                            011234


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..+.+||.+||..||..|||+.++++||||..
T Consensus       241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             ccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence            56778999999999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.95  E-value=4.9e-29  Score=231.90  Aligned_cols=165  Identities=21%  Similarity=0.331  Sum_probs=135.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.++|+|||++....... ......+++..|+|||++.
T Consensus       112 ~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  190 (297)
T cd06659         112 TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVIS  190 (297)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccceecCccccCHHHHc
Confidence            457888889999999999999999999999999999999999999999999987543321 2234467899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|..||...+....+..+..   .+.                          ......
T Consensus       191 ~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~--------------------------~~~~~~  240 (297)
T cd06659         191 RTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPP--------------------------PKLKNA  240 (297)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---cCC--------------------------CCcccc
Confidence            765 89999999999999999999999987776555544321   000                          011123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..+|.+|||+.++++||||..
T Consensus       241 ~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~  276 (297)
T cd06659         241 HKISPVLRDFLERMLTREPQERATAQELLDHPFLLQ  276 (297)
T ss_pred             CCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhcc
Confidence            456778999999999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=4.1e-29  Score=231.21  Aligned_cols=169  Identities=18%  Similarity=0.212  Sum_probs=131.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||++......  .......+|..|+|||+
T Consensus       101 ~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~  178 (288)
T cd06616         101 KSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS--IAKTRDAGCRPYMAPER  178 (288)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC--CccccccCccCccCHHH
Confidence            35688888999999999999999975 9999999999999999999999999999765322  12233467889999999


Q ss_pred             hhcC--CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         157 LMGA--RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       157 l~~~--~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +.+.  ..++.++||||+||++|+|++|.+||.....  ....+.......++.                        ..
T Consensus       179 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~------------------------~~  232 (288)
T cd06616         179 IDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPI------------------------LS  232 (288)
T ss_pred             hccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCc------------------------CC
Confidence            9765  2489999999999999999999999976542  222222221111100                        00


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .......+..+.+||.+||..||++|||+.+++.||||..
T Consensus       233 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         233 NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence            1112346788999999999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.95  E-value=6.2e-29  Score=231.12  Aligned_cols=165  Identities=24%  Similarity=0.298  Sum_probs=135.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.
T Consensus       110 ~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  188 (296)
T cd06655         110 TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVT  188 (296)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc-ccCCCcCCCccccCcchhc
Confidence            357888999999999999999999999999999999999999999999999987654321 1223457888999999988


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+|||||++|+|++|..||.+.+....+..+... +.+                            ....+
T Consensus       189 ~~~-~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~----------------------------~~~~~  238 (296)
T cd06655         189 RKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTP----------------------------ELQNP  238 (296)
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCc----------------------------ccCCc
Confidence            765 889999999999999999999999887765554443221 100                            11223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+|||+.+++.||||..
T Consensus       239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             ccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence            456788999999999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.95  E-value=7.4e-29  Score=229.88  Aligned_cols=167  Identities=21%  Similarity=0.230  Sum_probs=131.9

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ....+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||+
T Consensus       121 ~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~  199 (291)
T cd06639         121 CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEV  199 (291)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccccc-ccccCccCCccccChhh
Confidence            34567888899999999999999999999999999999999999999999999988653211 12233578899999999


Q ss_pred             hhcCC----CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         157 LMGAR----HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       157 l~~~~----~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      +....    .++.++||||+||++|+|++|.+||........+..+...   +.                          
T Consensus       200 ~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~--------------------------  250 (291)
T cd06639         200 IACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN---PP--------------------------  250 (291)
T ss_pred             hcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CC--------------------------
Confidence            85432    2578999999999999999999999877655444433211   00                          


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      .....+......+.+||.+||..||++|||+.++++||||.
T Consensus       251 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         251 PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            00111234556799999999999999999999999999994

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.95  E-value=9.2e-29  Score=225.96  Aligned_cols=164  Identities=20%  Similarity=0.203  Sum_probs=132.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-----CCCCcccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-----PNKAMTQEVVTQYYRA  153 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-----~~~~~~~~~~t~~y~a  153 (395)
                      ..+++..+..++.|++.|+.|||..||+|+||+|+||+++.++.++|+|||++......     .........++..|+|
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (265)
T cd06631          97 GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA  176 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccC
Confidence            45788888899999999999999999999999999999999999999999998764211     1112234568899999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+.. ++.++|+||+||++|+|++|..||...+.......+....+.                             
T Consensus       177 pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------  226 (265)
T cd06631         177 PEVINESG-YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL-----------------------------  226 (265)
T ss_pred             hhhhcCCC-CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-----------------------------
Confidence            99998765 899999999999999999999999876544433333221110                             


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ....+...+..+.+||.+||..+|.+|||+.++|.||||
T Consensus       227 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         227 MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            112345578889999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=7.4e-29  Score=226.85  Aligned_cols=165  Identities=20%  Similarity=0.217  Sum_probs=128.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      +.+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++...... .......+||..|+|||++.
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  179 (267)
T cd06645         101 GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-IAKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-ccccccccCcccccChhhhc
Confidence            46888999999999999999999999999999999999999999999999998765322 12234457899999999974


Q ss_pred             --cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 --GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 --~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                        ....++.++|+||+||++|+|++|.+||........+..+....-.+                           ....
T Consensus       180 ~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  232 (267)
T cd06645         180 VERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQP---------------------------PKLK  232 (267)
T ss_pred             cccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCC---------------------------Cccc
Confidence              12237889999999999999999999987655433322221100000                           0001


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      .....+..+.+||.+||..||++|||++++++|||
T Consensus       233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         233 DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            11235678999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=5.8e-29  Score=229.28  Aligned_cols=165  Identities=20%  Similarity=0.207  Sum_probs=128.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.||+|+||+|+||+++.++.++|+|||++.....   ......++|..|+|||++.+
T Consensus        91 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~y~aPE~~~~  167 (279)
T cd06619          91 KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN---SIAKTYVGTNAYMAPERISG  167 (279)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc---ccccCCCCChhhcCceeecC
Confidence            356666778999999999999999999999999999999999999999999986532   22344688999999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHH---HHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQL---GLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .. ++.++|+||+||++|+|++|..||.........   ..+........                          ....
T Consensus       168 ~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~  220 (279)
T cd06619         168 EQ-YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED--------------------------PPVL  220 (279)
T ss_pred             CC-CCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC--------------------------CCCC
Confidence            75 899999999999999999999999753211100   00000000000                          0000


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .....++.+.+||.+||..||++||++.+++.||||..
T Consensus       221 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~  258 (279)
T cd06619         221 PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ  258 (279)
T ss_pred             CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence            12346778999999999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=1.5e-28  Score=223.19  Aligned_cols=161  Identities=20%  Similarity=0.193  Sum_probs=132.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.
T Consensus        96 ~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  174 (256)
T cd08529          96 RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-NFANTIVGTPYYLSPELCE  174 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-chhhccccCccccCHHHhc
Confidence            457777888899999999999999999999999999999999999999999988654321 2233457889999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+|||||++++|++|..||...+.......+....                               ....+
T Consensus       175 ~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~~  222 (256)
T cd08529         175 DKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-------------------------------FPPVS  222 (256)
T ss_pred             CCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCCc
Confidence            876 8999999999999999999999998877555444432210                               01122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...+..+.++|.+||..+|++||++.++++|||+
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            3567789999999999999999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.95  E-value=8.1e-29  Score=226.60  Aligned_cols=163  Identities=19%  Similarity=0.292  Sum_probs=127.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC--CCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP--NKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~--~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++.....++.|++.|+.|||..||+|+||+|+||+++.++.++|+|||++.......  ........++..|+|||+
T Consensus       101 ~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (266)
T cd06651         101 GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEV  180 (266)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHH
Confidence            457777788899999999999999999999999999999999999999999987543211  111233467889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|+||+||++|+|++|.+||........+..+..   .+                           ....
T Consensus       181 ~~~~~-~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~---~~---------------------------~~~~  229 (266)
T cd06651         181 ISGEG-YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT---QP---------------------------TNPQ  229 (266)
T ss_pred             hCCCC-CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc---CC---------------------------CCCC
Confidence            98765 89999999999999999999999986644333322211   00                           0012


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      ++...++.+.+|| +||..+|++|||+.+++.||||.
T Consensus       230 ~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         230 LPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             CchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            2344667788888 67778999999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=7.3e-29  Score=227.15  Aligned_cols=159  Identities=20%  Similarity=0.300  Sum_probs=129.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-CeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.|+.|||+.|++||||+|.||+++.++ .++|+|||++.....     .....++..|+|||++.
T Consensus       105 ~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~  179 (267)
T PHA03390        105 KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT-----PSCYDGTLDYFSPEKIK  179 (267)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-----CccCCCCCcccChhhhc
Confidence            788999999999999999999999999999999999999988 999999999986532     12346788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhH-HHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQ-LGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~-l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++|..||........ ...+.....                             .....
T Consensus       180 ~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~  229 (267)
T PHA03390        180 GHN-YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ-----------------------------KKLPF  229 (267)
T ss_pred             CCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc-----------------------------ccCCc
Confidence            776 89999999999999999999999985543221 111111000                             11123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcC-HHHHHcCCccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRIS-VNSALCHPYLD  273 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~t-a~e~L~Hp~f~  273 (395)
                      +...++.+.+||.+||+.||.+|++ ++++|+||||.
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        230 IKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             ccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            3467889999999999999999996 59999999995

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=1.3e-28  Score=225.16  Aligned_cols=162  Identities=22%  Similarity=0.306  Sum_probs=131.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-----CCcccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-----KAMTQEVVTQYYRA  153 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-----~~~~~~~~t~~y~a  153 (395)
                      ..+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.++|+|||+++.......     .......++..|+|
T Consensus       101 ~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~  180 (267)
T cd06628         101 GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMA  180 (267)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccC
Confidence            4577888889999999999999999999999999999999999999999999886542111     11223467889999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+.. ++..+|+||+||++|+|++|..||.+.+....+..+...                               .
T Consensus       181 pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------------------------~  228 (267)
T cd06628         181 PEVVKQTS-YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN-------------------------------A  228 (267)
T ss_pred             hhHhccCC-CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc-------------------------------C
Confidence            99998765 789999999999999999999999876554433332210                               0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ....+...+..+.+||.+||..||.+|||+.++++||||
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         229 SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            112334567889999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=6.4e-29  Score=234.32  Aligned_cols=193  Identities=20%  Similarity=0.188  Sum_probs=130.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC------Ccccccccccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK------AMTQEVVTQYYRA  153 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~------~~~~~~~t~~y~a  153 (395)
                      .+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||.+.........      .....+++..|+|
T Consensus        97 ~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (327)
T cd08227          97 GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLS  176 (327)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccC
Confidence            4788888999999999999999999999999999999999999999999876543211110      1122356778999


Q ss_pred             hhhhhcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCC---------HHHHHhh-hh-hhhhhh
Q psy2865         154 PEILMGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPT---------PEEMRHA-CD-GAKCHM  221 (395)
Q Consensus       154 PEvl~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~---------~~~~~~~-~~-~~~~~~  221 (395)
                      ||++.+. ..|+.++||||+||++|+|++|..||........+....  .+..+         .+.+... .. ......
T Consensus       177 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
T cd08227         177 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL--NGTVPCLLDTTTIPAEELTMKPSRSGANSGL  254 (327)
T ss_pred             hHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHh--cCCccccccccchhhhhcccCCcccCCcCCC
Confidence            9999763 248999999999999999999999998765433322221  11111         1100000 00 000000


Q ss_pred             hhc-----cccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         222 LRQ-----TRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       222 ~~~-----~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...     .................++.+.+||.+||.+||++|||++++|+||||..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         255 GESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             CcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence            000     00000000111223346789999999999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG4236|consensus

Probab=99.95  E-value=3.8e-30  Score=239.21  Aligned_cols=165  Identities=25%  Similarity=0.362  Sum_probs=137.3

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC---CCeEEeeCCcccccCCCCCCCccccccccccc
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT---YSSKICDFGLARVEEPDPNKAMTQEVVTQYYR  152 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~---~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~  152 (395)
                      ...++|+++...|.+.||+.||.|||-.+|+|.||||+|||+.+.   -.+||||||+||....  .....+.+||+.|.
T Consensus       656 sEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--ksFRrsVVGTPAYL  733 (888)
T KOG4236|consen  656 SEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--KSFRRSVVGTPAYL  733 (888)
T ss_pred             hhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch--hhhhhhhcCCcccc
Confidence            456778999999999999999999999999999999999999754   4699999999998753  23445679999999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      ||||+...+ |+.+.||||+|+|+|--+.|..||....+ .+|++.- ..+-+                           
T Consensus       734 aPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNA-aFMyP---------------------------  784 (888)
T KOG4236|consen  734 APEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNA-AFMYP---------------------------  784 (888)
T ss_pred             CHHHHhhcc-ccccccceeeeEEEEEEecccccCCCccchhHHhhcc-ccccC---------------------------
Confidence            999999887 99999999999999999999999975433 3333321 11111                           


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                         ..-+..+++.+.|||..+|+..=++|.|+...|.|||+++
T Consensus       785 ---p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~  824 (888)
T KOG4236|consen  785 ---PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD  824 (888)
T ss_pred             ---CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence               1223567889999999999999999999999999999986

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.95  E-value=8.9e-29  Score=224.65  Aligned_cols=163  Identities=18%  Similarity=0.256  Sum_probs=131.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||..|++|+||+|.||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus        94 ~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~~PE~~~  172 (256)
T cd06612          94 KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT-MAKRNTVIGTPFWMAPEVIQ  172 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC-ccccccccCCccccCHHHHh
Confidence            56788888899999999999999999999999999999999999999999999865432 11223346788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|.+||...+.......+...   .                          ......+
T Consensus       173 ~~~-~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~---~--------------------------~~~~~~~  222 (256)
T cd06612         173 EIG-YNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK---P--------------------------PPTLSDP  222 (256)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC---C--------------------------CCCCCch
Confidence            775 899999999999999999999999876554332222110   0                          0011123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...+..+.+||.+||..||.+|||+.++|.||||
T Consensus       223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             hhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            3456789999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.1e-28  Score=226.69  Aligned_cols=162  Identities=22%  Similarity=0.272  Sum_probs=134.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... ......+++..|+|||++.+
T Consensus        94 ~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~  172 (274)
T cd06609          94 KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKRNTFVGTPFWMAPEVIKQ  172 (274)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-cccccccCCccccChhhhcc
Confidence            67888999999999999999999999999999999999999999999999998764321 23345578889999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|||||||++|+|++|.+||.+.+....+..+....  +                             .....
T Consensus       173 ~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~-----------------------------~~~~~  220 (274)
T cd06609         173 SG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--P-----------------------------PSLEG  220 (274)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--C-----------------------------CCCcc
Confidence            76 8999999999999999999999998766544433332210  0                             01111


Q ss_pred             C-CCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 Q-ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~-~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      . .+..+.+||.+||..||++|||++++++||||..
T Consensus       221 ~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~  256 (274)
T cd06609         221 NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK  256 (274)
T ss_pred             cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence            2 6778999999999999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=8e-29  Score=227.17  Aligned_cols=165  Identities=19%  Similarity=0.238  Sum_probs=131.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...... ........++..|+|||++
T Consensus       107 ~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~  185 (275)
T cd06608         107 GKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDST-LGRRNTFIGTPYWMAPEVI  185 (275)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccc-hhhhcCccccccccCHhHh
Confidence            457888889999999999999999999999999999999999999999999998764322 2223445789999999998


Q ss_pred             hcC----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MGA----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~~----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .+.    ..++.++||||+||++|+|++|.+||........+..+...   +.                          .
T Consensus       186 ~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~--------------------------~  236 (275)
T cd06608         186 ACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PP--------------------------P  236 (275)
T ss_pred             cccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CC--------------------------C
Confidence            542    23678899999999999999999999866554444433211   00                          0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ....+...+..+.+||.+||..||.+|||+.+++.|||+
T Consensus       237 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         237 TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            011122356789999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PHA02988 hypothetical protein; Provisional

Probab=99.95  E-value=1.8e-28  Score=226.52  Aligned_cols=156  Identities=17%  Similarity=0.158  Sum_probs=128.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      +.++...+..++.|++.|+.|||. .+++||||||+|||++.++.+||+|||+++.....    ....++|..|+|||++
T Consensus       117 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~  192 (283)
T PHA02988        117 KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----PFKNVNFMVYFSYKML  192 (283)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc----cccccCcccccCHHHh
Confidence            467888888999999999999998 49999999999999999999999999999865321    2345788999999999


Q ss_pred             hcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+. ..|+.++|||||||++|||++|..||.+.+..+.+..+.....                              ...
T Consensus       193 ~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~------------------------------~~~  242 (283)
T PHA02988        193 NDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNN------------------------------SLK  242 (283)
T ss_pred             hhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC------------------------------CCC
Confidence            762 2489999999999999999999999998776665555432111                              012


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ++...++.+.+||.+||..||++|||+.+++.
T Consensus       243 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        243 LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            33456788999999999999999999999985

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=1.2e-28  Score=227.76  Aligned_cols=165  Identities=18%  Similarity=0.225  Sum_probs=132.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||. .||+|+||+|+||+++.++.++|+|||++.....   ......+++..|+|||++
T Consensus        97 ~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~y~aPE~~  173 (286)
T cd06622          97 EGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA---SLAKTNIGCQSYMAPERI  173 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC---CccccCCCccCccCcchh
Confidence            368888999999999999999996 5999999999999999999999999999976532   223345788899999998


Q ss_pred             hcCC-----CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         158 MGAR-----HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       158 ~~~~-----~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      .+..     .++.++||||+||++|+|++|..||........+..+......+                           
T Consensus       174 ~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------------------  226 (286)
T cd06622         174 KSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD---------------------------  226 (286)
T ss_pred             cCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC---------------------------
Confidence            5432     25789999999999999999999997765444333332221111                           


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ....+...+..+.+||.+||..+|.+||++.+++.||||..
T Consensus       227 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~  267 (286)
T cd06622         227 -PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK  267 (286)
T ss_pred             -CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence             11234557889999999999999999999999999999965

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.4e-28  Score=226.64  Aligned_cols=167  Identities=19%  Similarity=0.265  Sum_probs=133.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||+.||+|+||+|+||+++.++.++|+|||++...... ........+|..|+|||++
T Consensus        97 ~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~y~~PE~~  175 (280)
T cd06611          97 ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST-LQKRDTFIGTPYWMAPEVV  175 (280)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc-ccccceeecchhhcCHHHH
Confidence            346889999999999999999999999999999999999999999999999998764321 2223445789999999998


Q ss_pred             hcC----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MGA----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~~----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .+.    ..++.++|+||+||++|+|++|.+||.+.+....+..+..  +.+                           .
T Consensus       176 ~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~---------------------------~  226 (280)
T cd06611         176 ACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK--SEP---------------------------P  226 (280)
T ss_pred             hhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc--CCC---------------------------C
Confidence            532    2367789999999999999999999987765544433321  100                           0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+...+..+.+||.+||..+|.+|||+.++|+||||..
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (280)
T cd06611         227 TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD  267 (280)
T ss_pred             CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence            11223456778999999999999999999999999999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=1.5e-28  Score=227.81  Aligned_cols=160  Identities=24%  Similarity=0.303  Sum_probs=135.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||..|++|+||+|.||+++.++.++|+|||++......    ....+++..|+|||.+.
T Consensus        96 ~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~  171 (290)
T cd05580          96 GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----TYTLCGTPEYLAPEIIL  171 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----CCCCCCCccccChhhhc
Confidence            56888889999999999999999999999999999999999999999999999875432    33457889999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|||||||++|+|++|..||.+.+.......+..  +                              ...++
T Consensus       172 ~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~------------------------------~~~~~  218 (290)
T cd05580         172 SKG-YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--G------------------------------KVRFP  218 (290)
T ss_pred             CCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--C------------------------------CccCC
Confidence            765 78999999999999999999999988775544444431  1                              11234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      ...+..+.+||.+||..||.+|+     +++++++||||...
T Consensus       219 ~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  260 (290)
T cd05580         219 SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI  260 (290)
T ss_pred             ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence            45678899999999999999999     99999999999763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.95  E-value=2e-28  Score=226.46  Aligned_cols=165  Identities=21%  Similarity=0.335  Sum_probs=134.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.++|+|||++....... ......+++..|+|||++.
T Consensus       110 ~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  188 (285)
T cd06648         110 TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPEVIS  188 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-cccccccCCccccCHHHhc
Confidence            357777888999999999999999999999999999999999999999999887543221 1223357899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+||+||++|+|++|..||.+.+....+..+....  +                           ......
T Consensus       189 ~~~-~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~--~---------------------------~~~~~~  238 (285)
T cd06648         189 RLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL--P---------------------------PKLKNL  238 (285)
T ss_pred             CCC-CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC--C---------------------------CCCccc
Confidence            765 8999999999999999999999998776655554443210  0                           001112


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..+|.+|||+.++++||||..
T Consensus       239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  274 (285)
T cd06648         239 HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK  274 (285)
T ss_pred             ccCCHHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence            336778999999999999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.95  E-value=1.1e-28  Score=229.50  Aligned_cols=165  Identities=22%  Similarity=0.305  Sum_probs=131.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.++|+|||++....... .......++..|+|||.+.
T Consensus       110 ~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  188 (297)
T cd06656         110 TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVT  188 (297)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-cCcCcccCCccccCHHHHc
Confidence            346677788899999999999999999999999999999999999999999987654321 2233457889999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+||+||++|+|++|.+||.+.+....+..+.. .+.+.                            ...+
T Consensus       189 ~~~-~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~----------------------------~~~~  238 (297)
T cd06656         189 RKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE----------------------------LQNP  238 (297)
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCC----------------------------CCCc
Confidence            765 88999999999999999999999987654333222211 11111                            1123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+|+.+||..||.+|||+.++|.||||..
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  274 (297)
T cd06656         239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL  274 (297)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence            456778899999999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=2e-28  Score=228.98  Aligned_cols=190  Identities=16%  Similarity=0.176  Sum_probs=132.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+ .+++|+||+|.|||++.++.++|+|||++.....   ......+++..|+|||++
T Consensus        94 ~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~~~aPE~~  170 (308)
T cd06615          94 GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERL  170 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc---cccccCCCCcCccChhHh
Confidence            557888889999999999999997 6999999999999999999999999999876432   123446789999999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHh-hh--------hhhhhhhhhccccC
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRH-AC--------DGAKCHMLRQTRKS  228 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~-~~--------~~~~~~~~~~~~~~  228 (395)
                      .+.. ++.++|+|||||++|+|++|..||.+.+.......+.............. ..        ..............
T Consensus       171 ~~~~-~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (308)
T cd06615         171 QGTH-YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNE  249 (308)
T ss_pred             cCCC-CCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcC
Confidence            7765 89999999999999999999999987664332222211000000000000 00        00000000000000


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..   ........+..+.+|+.+||..||++|||+.++++||||...
T Consensus       250 ~~---~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         250 PP---PKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             CC---ccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence            00   000011367789999999999999999999999999999763

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.95  E-value=2.2e-28  Score=223.03  Aligned_cols=163  Identities=21%  Similarity=0.270  Sum_probs=132.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.|++|+||+|.||+++.++.++|+|||++.......  .....+++..|++||++.
T Consensus        88 ~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~  165 (262)
T cd05572          88 GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIIL  165 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCcCccChhHhc
Confidence            347888888999999999999999999999999999999999999999999998754321  233457889999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCC--hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQS--PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~--~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.. ++.++|+||+||++|+|++|..||....  ....+..+....                              ....
T Consensus       166 ~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~  214 (262)
T cd05572         166 NKG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN------------------------------GKLE  214 (262)
T ss_pred             CCC-CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC------------------------------CCCC
Confidence            765 8999999999999999999999998766  333333332100                              0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~  274 (395)
                      .+...+..+.+||.+||..||++|+|     +.|+++||||.+
T Consensus       215 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         215 FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence            33445788999999999999999999     999999999975

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.95  E-value=2.4e-28  Score=223.15  Aligned_cols=168  Identities=21%  Similarity=0.231  Sum_probs=132.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC---Ccccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK---AMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~---~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++.........   .....+++..|+|||
T Consensus        97 ~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe  176 (267)
T cd06610          97 GGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPE  176 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChH
Confidence            45788888899999999999999999999999999999999999999999998765432211   123346889999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.....++.++|+||+||++++|++|..||...+....+..+...   .++                      .+.. .
T Consensus       177 ~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~----------------------~~~~-~  230 (267)
T cd06610         177 VMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPP----------------------SLET-G  230 (267)
T ss_pred             HHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCC----------------------CcCC-c
Confidence            9877644899999999999999999999999876655433333211   100                      0000 0


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ......++.+.+||.+||..||++|||+.+++.||||
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         231 ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             cccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            0123567889999999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.3e-28  Score=222.69  Aligned_cols=162  Identities=25%  Similarity=0.314  Sum_probs=132.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.|++|+||+|.||+++.++.++|+|||++.....     .....++..|+|||++.
T Consensus        92 ~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~y~~pe~~~  166 (260)
T cd05611          92 GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFVGTPDYLAPETIL  166 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCCCCcCccChhhhc
Confidence            4678888899999999999999999999999999999999999999999999875422     23346788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|.+||.+.+....+..+......                            ......
T Consensus       167 ~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  217 (260)
T cd05611         167 GVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN----------------------------WPEEVK  217 (260)
T ss_pred             CCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC----------------------------CCCccc
Confidence            876 899999999999999999999999887765544443221000                            001122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcC---HHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRIS---VNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~t---a~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||+.|||   ++|+|.||||..
T Consensus       218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~  256 (260)
T cd05611         218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS  256 (260)
T ss_pred             ccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence            356788999999999999999995   479999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.95  E-value=9.3e-29  Score=258.64  Aligned_cols=162  Identities=16%  Similarity=0.190  Sum_probs=119.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-------------------CCCeEEeeCCcccccCCCC-
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-------------------TYSSKICDFGLARVEEPDP-  138 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-------------------~~~vKl~DFGla~~~~~~~-  138 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||||+.                   ++.+||+|||+++...... 
T Consensus        75 ~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~  154 (793)
T PLN00181         75 RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSE  154 (793)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccc
Confidence            45888899999999999999999999999999999999954                   4456677777776421100 


Q ss_pred             --------------CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCC
Q psy2865         139 --------------NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGT  204 (395)
Q Consensus       139 --------------~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~  204 (395)
                                    .......++|++|||||++.+.. |+.++|||||||++|||++|.++|....  ..+..+.... .
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~  230 (793)
T PLN00181        155 RRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-L  230 (793)
T ss_pred             cchhhhhccccCCCcccccccCCCcceEChhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-c
Confidence                          00112247899999999998876 8999999999999999999888765321  1111111000 0


Q ss_pred             CCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         205 PTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      | +                             ......+...+++.+||..||.+|||+.|+|+||||..
T Consensus       231 ~-~-----------------------------~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        231 P-P-----------------------------QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             C-h-----------------------------hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            0 0                             00112345678999999999999999999999999965

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.95  E-value=2.1e-28  Score=225.32  Aligned_cols=167  Identities=23%  Similarity=0.277  Sum_probs=133.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++.....  ........++..|+|||++.
T Consensus        90 ~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~y~~PE~~~  167 (277)
T cd05577          90 PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGRAGTPGYMAPEVLQ  167 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCccccccCCCCcCCHHHhc
Confidence            3678888999999999999999999999999999999999999999999999876532  22233456788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|..||.+.........+....                            .......+
T Consensus       168 ~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~  218 (277)
T cd05577         168 GEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT----------------------------LEMAVEYP  218 (277)
T ss_pred             CCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc----------------------------ccccccCC
Confidence            776 8999999999999999999999997765422112221100                            00112334


Q ss_pred             CCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      ...++.+.+||.+||..||.+||     ++.+++.||||....
T Consensus       219 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~  261 (277)
T cd05577         219 DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN  261 (277)
T ss_pred             ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence            55688999999999999999999     999999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=3.7e-28  Score=229.91  Aligned_cols=161  Identities=17%  Similarity=0.207  Sum_probs=127.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||..||+||||||.|||++.++.++|+|||+|+.+...... ..+...++..|+|||+
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  246 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES  246 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence            346788888999999999999999999999999999999999999999999999865332211 1223355678999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++||||+||++|+|++ |.+||.+....+.+...... +                             ...
T Consensus       247 ~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-~-----------------------------~~~  295 (337)
T cd05054         247 IFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE-G-----------------------------TRM  295 (337)
T ss_pred             hcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc-c-----------------------------CCC
Confidence            98876 8999999999999999997 99999875443333222110 0                             001


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...++.+.+++.+||..+|++|||+.++++|
T Consensus       296 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         296 RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            1234567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.95  E-value=3.4e-28  Score=227.95  Aligned_cols=194  Identities=15%  Similarity=0.132  Sum_probs=131.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC------CCccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN------KAMTQEVVTQYYR  152 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~------~~~~~~~~t~~y~  152 (395)
                      ..+++..+..++.|++.||.|||..||+||||+|+||+++.++.++|+|||.+........      .......++..|+
T Consensus        96 ~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  175 (314)
T cd08216          96 EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWL  175 (314)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccccccc
Confidence            3467778888999999999999999999999999999999999999999999875432111      1123345778899


Q ss_pred             chhhhhcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh---cccc-
Q psy2865         153 APEILMGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR---QTRK-  227 (395)
Q Consensus       153 aPEvl~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~-  227 (395)
                      |||++.+. ..|+.++||||+||++|+|++|..||........+..  ...|..+...-.............   .... 
T Consensus       176 aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (314)
T cd08216         176 SPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLE--KVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHP  253 (314)
T ss_pred             CHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhccCccccccCchhhhcCCcCccccccccc
Confidence            99998753 2388999999999999999999999987654433221  112211110000000000000000   0000 


Q ss_pred             CCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         228 SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..............+..+.+|+..||.+||++|||+.++|.||||..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~  300 (314)
T cd08216         254 NNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ  300 (314)
T ss_pred             chhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence            00000001122234578899999999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.95  E-value=3.3e-28  Score=224.81  Aligned_cols=165  Identities=20%  Similarity=0.240  Sum_probs=129.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||+.+++||||+|+||+++.++.++|+|||++...... ........++..|+|||++
T Consensus       118 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~  196 (286)
T cd06638         118 GERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST-RLRRNTSVGTPFWMAPEVI  196 (286)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccC-CCccccccCCCcccChhhh
Confidence            345777788889999999999999999999999999999999999999999999865432 1223345789999999998


Q ss_pred             hcC----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MGA----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~~----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .+.    ..++.++||||+||++|+|++|..||........+..+...  .+                           .
T Consensus       197 ~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~--~~---------------------------~  247 (286)
T cd06638         197 ACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PP---------------------------P  247 (286)
T ss_pred             chhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--CC---------------------------C
Confidence            531    23788999999999999999999999876544333222110  00                           0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ....+...+..+.+||.+||..||++|||+.+++.|+||
T Consensus       248 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         248 TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            011223356789999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.95  E-value=4e-28  Score=221.97  Aligned_cols=167  Identities=20%  Similarity=0.262  Sum_probs=131.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-CeEEeeCCcccccCCCCC---CCcccccccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~---~~~~~~~~t~~y~aP  154 (395)
                      +.+++..+..++.||+.|+.|||+.|++|+||+|.||+++.++ .++|+|||++........   ......++|..|+||
T Consensus        98 ~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~P  177 (268)
T cd06630          98 GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAP  177 (268)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCH
Confidence            4678888899999999999999999999999999999998776 599999999876543211   112234678899999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. ++.++|+||+||++++|++|..||...........+......                           ...
T Consensus       178 E~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~  229 (268)
T cd06630         178 EVLRGEQ-YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA---------------------------TTA  229 (268)
T ss_pred             hHhccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc---------------------------CCC
Confidence            9998765 899999999999999999999999765543333333221100                           001


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      ...+...++.+.+|+.+||..+|..|||+.+++.||||.
T Consensus       230 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         230 PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            123445678899999999999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=3e-28  Score=226.27  Aligned_cols=163  Identities=11%  Similarity=0.051  Sum_probs=123.2

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC------CCcccccccccccch
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN------KAMTQEVVTQYYRAP  154 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~------~~~~~~~~t~~y~aP  154 (395)
                      +++..+..++.|++.|+.|||+.||+||||||+|||++.++.++|+|||+|+.......      .......||+.|+||
T Consensus       123 ~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ap  202 (294)
T PHA02882        123 KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGL  202 (294)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCH
Confidence            45556778999999999999999999999999999999999999999999986532211      112234799999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. ++.++||||+||++|+|++|.+||.+......+......      +.+..+.                  ..
T Consensus       203 e~~~~~~-~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~------~~~~~~~------------------~~  257 (294)
T PHA02882        203 DAHNGAC-VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC------DFIKRLH------------------EG  257 (294)
T ss_pred             HHhCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH------HHHHHhh------------------hh
Confidence            9998876 899999999999999999999999877433222211110      0000000                  00


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .......+..+.+|+..|+..+|++||+++++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        258 KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            0112345688999999999999999999999874

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=3.7e-28  Score=224.14  Aligned_cols=159  Identities=14%  Similarity=0.222  Sum_probs=129.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||..|++|+||||+||+++.++.++|+|||++....... ....+...+|+.|+|||++
T Consensus       119 ~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  198 (283)
T cd05048         119 SSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAI  198 (283)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHh
Confidence            345666778899999999999999999999999999999999999999999997643221 1223345678889999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|||++ |..||.+.+..+....|...                               ....
T Consensus       199 ~~~~-~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~-------------------------------~~~~  246 (283)
T cd05048         199 LYGK-FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-------------------------------QLLP  246 (283)
T ss_pred             ccCc-CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-------------------------------CcCC
Confidence            8765 8999999999999999997 99999887766554444321                               0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.+|+.+||..||.+|||+.+++++
T Consensus       247 ~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         247 CPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            345678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.95  E-value=1.1e-28  Score=221.88  Aligned_cols=153  Identities=22%  Similarity=0.290  Sum_probs=124.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||..||+||||||+||+++.++.++|+|||++.....    ......++..|+|||++.
T Consensus        80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~----~~~~~~~~~~y~aPE~~~  155 (237)
T cd05576          80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED----SCDGEAVENMYCAPEVGG  155 (237)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc----ccccCCcCccccCCcccC
Confidence            3488888999999999999999999999999999999999999999999998876432    233445677899999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+||+||++|+|++|..+|......     +.                               ......++
T Consensus       156 ~~~-~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~-------------------------------~~~~~~~~  198 (237)
T cd05576         156 ISE-ETEACDWWSLGAILFELLTGKTLVECHPSG-----IN-------------------------------THTTLNIP  198 (237)
T ss_pred             CCC-CCchhhHHHHHHHHHHHHHCcchhhcCchh-----cc-------------------------------cccccCCc
Confidence            665 789999999999999999999887532210     00                               00001234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCH-----HHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISV-----NSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta-----~e~L~Hp~f  272 (395)
                      ...++.+.+||.+||..||++|+|+     ++++.||||
T Consensus       199 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         199 EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            5578889999999999999999986     999999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.95  E-value=3.7e-28  Score=224.07  Aligned_cols=163  Identities=21%  Similarity=0.242  Sum_probs=129.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.|+.|||+. +++||||+|+||+++.++.+||+|||++......  ...+...++..|+|||++
T Consensus        98 ~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~  175 (283)
T cd06617          98 LTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS--VAKTIDAGCKPYMAPERI  175 (283)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc--cccccccCCccccChhhc
Confidence            5688999999999999999999997 9999999999999999999999999999865321  122335688899999988


Q ss_pred             hcC---CCCCccchHHhHHHHHHHHHcCCCCCCCC-ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MGA---RHYSAAVDVWSVGCIFAELLGRRILFQAQ-SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~~---~~~~~~~DiWSlG~il~ell~g~~~f~~~-~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .+.   ..++.++|+||+||++|+|++|..||... ...+.+..+...  .+                            
T Consensus       176 ~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~----------------------------  225 (283)
T cd06617         176 NPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE--PS----------------------------  225 (283)
T ss_pred             CCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--CC----------------------------
Confidence            652   23688999999999999999999999643 222333332210  00                            


Q ss_pred             hhcc-CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSL-SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~-~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ... ....+..+.+||.+||..+|.+|||+.+++.||||..
T Consensus       226 -~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  266 (283)
T cd06617         226 -PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL  266 (283)
T ss_pred             -CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence             001 1235778999999999999999999999999999976

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.95  E-value=6.3e-28  Score=219.86  Aligned_cols=162  Identities=25%  Similarity=0.316  Sum_probs=133.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcc-----ccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCccccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDST-----IDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYR  152 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH-----~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~  152 (395)
                      ...+++..+..++.||+.|+.|||     ..+++|+||+|+||+++.++.++|+|||++....... ......+++..|+
T Consensus        99 ~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-~~~~~~~~~~~~~  177 (265)
T cd08217          99 RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS-SFAKTYVGTPYYM  177 (265)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc-ccccccccCCCcc
Confidence            456788888999999999999999     8899999999999999999999999999998764321 2234457899999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      |||++.+.. ++.++|+|||||++++|++|..||.+.+.......+...                               
T Consensus       178 ~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------------------------  225 (265)
T cd08217         178 SPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG-------------------------------  225 (265)
T ss_pred             ChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC-------------------------------
Confidence            999998765 889999999999999999999999887644433333210                               


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ....++...+..+.+|+.+||..+|.+|||+.++|+|||+
T Consensus       226 ~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         226 KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            0112344567889999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.95  E-value=2.7e-28  Score=223.09  Aligned_cols=165  Identities=19%  Similarity=0.194  Sum_probs=126.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.||+||||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus       101 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         101 GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT-IAKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc-ccccCccccCccccCHhHcc
Confidence            45788888899999999999999999999999999999999999999999999865322 12223457889999999985


Q ss_pred             c--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 G--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +  ...++.++|+||+||++|+|++|.+||...........+....-.+                           ....
T Consensus       180 ~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~  232 (267)
T cd06646         180 VEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQP---------------------------PKLK  232 (267)
T ss_pred             cccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCC---------------------------CCCc
Confidence            2  2237789999999999999999999986554332222111100000                           0001


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      .....+..+.+||.+||..||++|||++++|+|+|
T Consensus       233 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            12345678999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.95  E-value=4.5e-28  Score=220.18  Aligned_cols=160  Identities=23%  Similarity=0.297  Sum_probs=131.8

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.+
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~  175 (256)
T cd08218          97 LFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST-VELARTCIGTPYYLSPEICEN  175 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc-hhhhhhccCCccccCHHHhCC
Confidence            4677778889999999999999999999999999999999999999999999765332 112233467889999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|+||+||++++|++|..||...+..+.+..+..  |.                             ....+.
T Consensus       176 ~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~-----------------------------~~~~~~  223 (256)
T cd08218         176 RP-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GS-----------------------------YPPVSS  223 (256)
T ss_pred             CC-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CC-----------------------------CCCCcc
Confidence            65 78999999999999999999999987766555544421  11                             011234


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ..+..+.++|.+||..+|.+||++.++|.||||
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         224 HYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            567889999999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG4721|consensus

Probab=99.95  E-value=1.3e-28  Score=230.90  Aligned_cols=161  Identities=19%  Similarity=0.198  Sum_probs=131.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++..-...|..+|+.|+.|||.+.|||||||..||||..+..|||+|||-++....-  ...-.++||..|||||||.
T Consensus       207 ~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTVaWMAPEvIr  284 (904)
T KOG4721|consen  207 RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTVAWMAPEVIR  284 (904)
T ss_pred             CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhHhhhCHHHhh
Confidence            34455555678899999999999999999999999999999999999999999875432  3445689999999999999


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      ..+ .+.++|||||||+|||||||..||..-   +..+.|..+ |...                          -....+
T Consensus       285 neP-csEKVDIwSfGVVLWEmLT~EiPYkdV---dssAIIwGV-GsNs--------------------------L~LpvP  333 (904)
T KOG4721|consen  285 NEP-CSEKVDIWSFGVVLWEMLTGEIPYKDV---DSSAIIWGV-GSNS--------------------------LHLPVP  333 (904)
T ss_pred             cCC-cccccceehhHHHHHHHHhcCCCcccc---chheeEEec-cCCc--------------------------ccccCc
Confidence            987 899999999999999999999999753   334444322 1111                          112456


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ..++..|.=||++||.-.|..||++.|+|.|-=+
T Consensus       334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            7788889999999999999999999999999443

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.8e-28  Score=220.07  Aligned_cols=165  Identities=20%  Similarity=0.235  Sum_probs=130.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.||+|+||+|+||+++.++.++|+|||++...... .......+++..|+|||++.
T Consensus        96 ~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~y~~Pe~~~  174 (262)
T cd06613          96 GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT-IAKRKSFIGTPYWMAPEVAA  174 (262)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh-hhccccccCCccccCchhhc
Confidence            46788888999999999999999999999999999999999999999999999765432 12234457888999999987


Q ss_pred             cC--CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 GA--RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~--~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.  ..++.++|+||+||++|+|++|.+||.+.+.......+... +..+.                          ...
T Consensus       175 ~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~-~~~~~--------------------------~~~  227 (262)
T cd06613         175 VERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS-NFPPP--------------------------KLK  227 (262)
T ss_pred             ccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-cCCCc--------------------------ccc
Confidence            65  13788999999999999999999999877655444333211 00000                          001


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      .....+..+.+||.+||..+|..|||+.+++.|+|
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            11234567899999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.95  E-value=7.2e-28  Score=220.14  Aligned_cols=163  Identities=18%  Similarity=0.272  Sum_probs=128.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC--CCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP--NKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~--~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||+++......  ........++..|+|||+
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (265)
T cd06652         101 GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEV  180 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhh
Confidence            346777778899999999999999999999999999999999999999999988643211  112334568889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|+|||||++|+|++|..||........+..+.   ..+.                           ...
T Consensus       181 ~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~---------------------------~~~  229 (265)
T cd06652         181 ISGEG-YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA---TQPT---------------------------NPV  229 (265)
T ss_pred             hcCCC-CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh---cCCC---------------------------CCC
Confidence            98765 8999999999999999999999998665443333221   1110                           011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      .+...+..+.++|.+||. +|..|||++++++|||+.
T Consensus       230 ~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         230 LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            234567789999999994 999999999999999983

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0584|consensus

Probab=99.94  E-value=5.3e-28  Score=230.08  Aligned_cols=162  Identities=19%  Similarity=0.224  Sum_probs=132.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc--CccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID--GYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~--~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      -+...-...+.|++||+.||.|||++  .|||||||-+||+|+ ..|.|||+|+|||....   ..+..+.+|||.||||
T Consensus       137 ~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r---~s~aksvIGTPEFMAP  213 (632)
T KOG0584|consen  137 HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR---KSHAKSVIGTPEFMAP  213 (632)
T ss_pred             hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhh---ccccceeccCccccCh
Confidence            34455557889999999999999987  699999999999998 46999999999999864   3345668999999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH-hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV-QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      |++-.  .|+..+||||||.+|.||+|+.+||.--... .++.+++.  |..|.                          
T Consensus       214 EmYEE--~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--GiKP~--------------------------  263 (632)
T KOG0584|consen  214 EMYEE--NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--GIKPA--------------------------  263 (632)
T ss_pred             HHHhh--hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--CCCHH--------------------------
Confidence            99873  5999999999999999999999999865544 44444432  22221                          


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                        .+..-.++++++||.+||.. .+.|+||.|+|.||||+..
T Consensus       264 --sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  264 --ALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             --HhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence              12233478999999999999 9999999999999999874

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.94  E-value=9.6e-28  Score=218.67  Aligned_cols=163  Identities=26%  Similarity=0.395  Sum_probs=133.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-------CCcccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-------KAMTQEVVTQYY  151 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-------~~~~~~~~t~~y  151 (395)
                      ..+++..+..++.||+.||.|||..|++|+||+|+||+++.++.++|+|||++........       ......+++..|
T Consensus        88 ~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (265)
T cd05579          88 GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDY  167 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccc
Confidence            3678888889999999999999999999999999999999999999999999875432211       122345678899


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      +|||++.+.. ++.++|+|||||++|+|++|..||........+..+..  +.                           
T Consensus       168 ~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~---------------------------  217 (265)
T cd05579         168 IAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--GK---------------------------  217 (265)
T ss_pred             cCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CC---------------------------
Confidence            9999998766 78999999999999999999999987776555544432  10                           


Q ss_pred             chhhccCCC--CCHHHHHHHHHccccCCCCCcCH---HHHHcCCcccc
Q psy2865         232 SSLYSLSSQ--ATGEAVHLLVQMLYFDPTKRISV---NSALCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~--~~~~~~dll~~mL~~dP~~R~ta---~e~L~Hp~f~~  274 (395)
                         ..++..  .+..+.+|+.+||..+|.+|||+   .++|+||||..
T Consensus       218 ---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         218 ---IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             ---cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence               011111  47889999999999999999999   99999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.94  E-value=1.3e-27  Score=217.24  Aligned_cols=162  Identities=24%  Similarity=0.377  Sum_probs=134.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.+||+|||++....... ......+++..|+|||++
T Consensus        95 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~~~~~~~~y~ape~~  173 (256)
T cd08221          95 GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY-SMAETVVGTPYYMSPELC  173 (256)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc-ccccccCCCccccCHhhc
Confidence            3457888888999999999999999999999999999999999999999999998654322 123455789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|+||+||++|+|++|..+|.+.+..+....+..  |.+                             ...
T Consensus       174 ~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~-----------------------------~~~  221 (256)
T cd08221         174 QGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNY-----------------------------TPV  221 (256)
T ss_pred             CCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCC-----------------------------CCC
Confidence            8765 78999999999999999999999988776665555432  111                             112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ....+..+.+||.+||..+|.+|||+.++|.|||+
T Consensus       222 ~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         222 VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            24567889999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.94  E-value=5.3e-28  Score=222.52  Aligned_cols=163  Identities=21%  Similarity=0.200  Sum_probs=131.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  174 (277)
T cd06642          96 GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT-QIKRNTFVGTPFWMAPEVIK  174 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCc-chhhhcccCcccccCHHHhC
Confidence            45778888899999999999999999999999999999999999999999999765432 11223346788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+|||||++|+|++|.+||...........+...                               ....+.
T Consensus       175 ~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~~  222 (277)
T cd06642         175 QSA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-------------------------------SPPTLE  222 (277)
T ss_pred             cCC-CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC-------------------------------CCCCCC
Confidence            765 899999999999999999999999765543333222110                               001122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..+|.+|||+.++++||||..
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence            345678999999999999999999999999999964

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.94  E-value=8.5e-28  Score=221.81  Aligned_cols=158  Identities=16%  Similarity=0.191  Sum_probs=127.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.|++.||.|||+.||+||||||.||+++.++.+||+|||+++....... .......+++.|+|||++.
T Consensus       120 ~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05091         120 TLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM  199 (283)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHh
Confidence            466667788999999999999999999999999999999999999999999886532211 1223345678899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|||++ |.+||.+.+..+.+..+....                               ....
T Consensus       200 ~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-------------------------------~~~~  247 (283)
T cd05091         200 YGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ-------------------------------VLPC  247 (283)
T ss_pred             cCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-------------------------------cCCC
Confidence            765 8999999999999999997 889998877766655554311                               0123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+|+.+||+.+|.+|||+.+++..
T Consensus       248 ~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         248 PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            45677889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.94  E-value=4.3e-28  Score=228.76  Aligned_cols=196  Identities=17%  Similarity=0.067  Sum_probs=129.8

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC------cccccccccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA------MTQEVVTQYYRA  153 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~------~~~~~~t~~y~a  153 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||.+..........      .....++..|+|
T Consensus        97 ~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (328)
T cd08226          97 GMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLS  176 (328)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccC
Confidence            47778888999999999999999999999999999999999999999998654332111100      011134567999


Q ss_pred             hhhhhcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHH--HHhhhhhh---hhhhhh----
Q psy2865         154 PEILMGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEE--MRHACDGA---KCHMLR----  223 (395)
Q Consensus       154 PEvl~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~--~~~~~~~~---~~~~~~----  223 (395)
                      ||++.+. ..++.++||||+||++|+|++|.+||.+......+..+.......+...  +.......   ......    
T Consensus       177 PE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (328)
T cd08226         177 PELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGE  256 (328)
T ss_pred             hhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccccc
Confidence            9999763 2378999999999999999999999988765554443332111111000  00000000   000000    


Q ss_pred             cccc-----CCc-cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         224 QTRK-----SQS-LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       224 ~~~~-----~~~-~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ....     ... ...........+..+.+||.+||.+||++||||.++|+||||...
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         257 SVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             chhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence            0000     000 000001123456789999999999999999999999999999763

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1035|consensus

Probab=99.94  E-value=9.2e-28  Score=242.49  Aligned_cols=160  Identities=24%  Similarity=0.285  Sum_probs=124.9

Q ss_pred             CCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccC-----------------CCCCCCcccc
Q psy2865          83 SRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEE-----------------PDPNKAMTQE  145 (395)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~-----------------~~~~~~~~~~  145 (395)
                      ...+...++||++||.|+|+.|||||||||.||++++++.|||+|||+|+...                 .......|+.
T Consensus       696 ~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~  775 (1351)
T KOG1035|consen  696 RDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQ  775 (1351)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccc
Confidence            56677889999999999999999999999999999999999999999998611                 0112356788


Q ss_pred             cccccccchhhhhcCC--CCCccchHHhHHHHHHHHHcCCCCCCCCC-hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         146 VVTQYYRAPEILMGAR--HYSAAVDVWSVGCIFAELLGRRILFQAQS-PVQQLGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       146 ~~t~~y~aPEvl~~~~--~~~~~~DiWSlG~il~ell~g~~~f~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                      +||..|+|||++.+..  .|+.++||||+|+|+|||+.   ||...- ....+..+..  |..                 
T Consensus       776 VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~--g~i-----------------  833 (1351)
T KOG1035|consen  776 VGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRK--GSI-----------------  833 (1351)
T ss_pred             cceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhccc--CCC-----------------
Confidence            9999999999997766  69999999999999999983   465432 2222222211  100                 


Q ss_pred             hccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         223 RQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                           +    ....++...-+....+|+.||..||.+||||.|+|++.||-
T Consensus       834 -----P----~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  834 -----P----EPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             -----C----CCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence                 0    00233444556778999999999999999999999999995

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.1e-28  Score=221.54  Aligned_cols=163  Identities=18%  Similarity=0.284  Sum_probs=131.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... ......+++..|+|||++.+
T Consensus        97 ~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  175 (277)
T cd06917          97 PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS-SKRSTFVGTPYWMAPEVITE  175 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-cccccccCCcceeCHHHhcc
Confidence            67888889999999999999999999999999999999999999999999998764322 22344578999999999876


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      ...++.++|+||+||++|+|++|.+||.+.........+..   ..+                            ..+..
T Consensus       176 ~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~---~~~----------------------------~~~~~  224 (277)
T cd06917         176 GKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK---SKP----------------------------PRLED  224 (277)
T ss_pred             CCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc---CCC----------------------------CCCCc
Confidence            54478999999999999999999999987654332221110   000                            01111


Q ss_pred             -CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 -QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 -~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ..+..+.+||.+||..||.+|||+.+++.|+||..
T Consensus       225 ~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~  260 (277)
T cd06917         225 NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA  260 (277)
T ss_pred             ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence             25678999999999999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.94  E-value=1.1e-27  Score=219.26  Aligned_cols=161  Identities=22%  Similarity=0.276  Sum_probs=124.1

Q ss_pred             cCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          82 SSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      ++..+..++.||+.|+.|||+.||+||||+|.||+++. ++.++|+|||++...... ........++..|+|||++.+.
T Consensus       106 ~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~  184 (268)
T cd06624         106 NEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI-NPCTETFTGTLQYMAPEVIDKG  184 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC-CCccccCCCCccccChhhhccc
Confidence            56667788999999999999999999999999999976 678999999998754321 1223334678899999998653


Q ss_pred             C-CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         161 R-HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       161 ~-~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      . .++.++|+||+||++|+|++|.+||................                             .....++.
T Consensus       185 ~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~  235 (268)
T cd06624         185 PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF-----------------------------KIHPEIPE  235 (268)
T ss_pred             cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh-----------------------------ccCCCCCc
Confidence            2 37889999999999999999999997543211111000000                             01112345


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ..++.+.+|+.+||..+|.+|||+.+++.||||
T Consensus       236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         236 SLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             ccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            677889999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.94  E-value=1.2e-27  Score=217.42  Aligned_cols=162  Identities=19%  Similarity=0.238  Sum_probs=131.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||+.|++|+||+|+||+++.++.+||+|||++.......  ......++..|+|||.+.
T Consensus        97 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~  174 (258)
T cd06632          97 GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIA  174 (258)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--cccccCCCcceeCHHHhc
Confidence            457778888899999999999999999999999999999999999999999987653221  234457889999999986


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      ....++.++|+||+||++|+|++|.+||........+..+....                              .....+
T Consensus       175 ~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------------------------------~~~~~~  224 (258)
T cd06632         175 QQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK------------------------------ELPPIP  224 (258)
T ss_pred             CCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc------------------------------cCCCcC
Confidence            54337889999999999999999999997766444333322100                              111234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...++.+.+|+.+||..+|.+|||+.++|.||||
T Consensus       225 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         225 DHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             CCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            5577899999999999999999999999999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=1.3e-27  Score=223.25  Aligned_cols=166  Identities=19%  Similarity=0.205  Sum_probs=130.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--------------CCccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--------------KAMTQ  144 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--------------~~~~~  144 (395)
                      ..+++..+..++.|++.|+.|||+.|++||||+|.||+++.++.++|+|||+++.......              .....
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (305)
T cd05609          96 GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQ  175 (305)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccC
Confidence            4578888888999999999999999999999999999999999999999999874211000              01112


Q ss_pred             ccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc
Q psy2865         145 EVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ  224 (395)
Q Consensus       145 ~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  224 (395)
                      ..++..|+|||++.+.. ++.++|+|||||++|+|++|..||.+.+..+.+..+.......                   
T Consensus       176 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------  235 (305)
T cd05609         176 VCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW-------------------  235 (305)
T ss_pred             CccCccccCchhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC-------------------
Confidence            35788899999988765 8999999999999999999999998877655554443210000                   


Q ss_pred             cccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcC---HHHHHcCCcccc
Q psy2865         225 TRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRIS---VNSALCHPYLDE  274 (395)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t---a~e~L~Hp~f~~  274 (395)
                                .......+..+.+||.+||..||++|||   +.++|.||||..
T Consensus       236 ----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         236 ----------PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             ----------CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence                      0011246788999999999999999997   789999999965

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=8.7e-28  Score=218.13  Aligned_cols=160  Identities=21%  Similarity=0.317  Sum_probs=130.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-CCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||+.|++|+||+|.||+++.+ +.++|+|||++......  ......+++..|+|||++
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~~~y~aPE~~  173 (256)
T cd08220          96 SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK--SKAYTVVGTPCYISPELC  173 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC--ccccccccCCcccCchhc
Confidence            447788888999999999999999999999999999999855 45899999999875432  122335788899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|+||+||++|+|++|..+|.+.+.......+...                               .....
T Consensus       174 ~~~~-~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~  221 (256)
T cd08220         174 EGKP-YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG-------------------------------TFAPI  221 (256)
T ss_pred             cCCC-CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc-------------------------------CCCCC
Confidence            8765 789999999999999999999999877655444433211                               01123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +...+..+.+|+.+||..||.+|||+.++++||||
T Consensus       222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         222 SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             CCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            34567889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=5.1e-28  Score=220.92  Aligned_cols=161  Identities=22%  Similarity=0.278  Sum_probs=128.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||+ .|++|+||+|+||+++.++.++|+|||++.......   .....++..|+|||++
T Consensus        95 ~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~y~~PE~~  171 (265)
T cd06605          95 GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL---AKTFVGTSSYMAPERI  171 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH---hhcccCChhccCHHHH
Confidence            567777888899999999999999 999999999999999999999999999987643211   1126788899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCC-----hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQS-----PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~-----~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      .+.. ++.++||||+||++|+|++|..||....     ..+.+..+.   ..+.                          
T Consensus       172 ~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~--------------------------  221 (265)
T cd06605         172 QGND-YSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV---NEPP--------------------------  221 (265)
T ss_pred             cCCC-CCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh---cCCC--------------------------
Confidence            8875 8999999999999999999999997652     122222221   1110                          


Q ss_pred             hhhccCCC-CCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         233 SLYSLSSQ-ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       233 ~~~~~~~~-~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        ...+.. .+..+.+||.+||..||.+|||+.+++.||||..
T Consensus       222 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         222 --PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             --CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence              011122 6788999999999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.94  E-value=1.3e-27  Score=218.26  Aligned_cols=158  Identities=17%  Similarity=0.206  Sum_probs=125.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||..|++||||+|+||+++.++.+||+|||++...............++..|+|||++.
T Consensus        99 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  178 (263)
T cd05052          99 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA  178 (263)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhc
Confidence            34677777889999999999999999999999999999999999999999999875432211112223456799999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.+..+....+....                               ....
T Consensus       179 ~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  226 (263)
T cd05052         179 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY-------------------------------RMER  226 (263)
T ss_pred             cCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-------------------------------CCCC
Confidence            765 8999999999999999998 999998876655444432210                               0123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+||.+||..||++|||+.++++
T Consensus       227 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         227 PEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            3456789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0197|consensus

Probab=99.94  E-value=6.8e-28  Score=226.34  Aligned_cols=159  Identities=21%  Similarity=0.232  Sum_probs=132.8

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      .+..+.-.+...++.||++|++||.++++|||||-..||||+.+..|||+|||+|+...++........--...|.|||+
T Consensus       296 ~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa  375 (468)
T KOG0197|consen  296 EGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEA  375 (468)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHH
Confidence            34556667778899999999999999999999999999999999999999999999654443333333333557999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.... ++.++||||||++|+||+ .|+.||.+.+..+.+..+.+....                               
T Consensus       376 ~~~~~-FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl-------------------------------  423 (468)
T KOG0197|consen  376 LNYGK-FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL-------------------------------  423 (468)
T ss_pred             HhhCC-cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC-------------------------------
Confidence            98876 999999999999999999 589999999999888887653322                               


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHH
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSAL  267 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L  267 (395)
                      .-|..+++.+-+++..|+..+|++|||++.+.
T Consensus       424 p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  424 PRPEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            34567899999999999999999999998654

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.94  E-value=1.1e-27  Score=222.20  Aligned_cols=164  Identities=20%  Similarity=0.316  Sum_probs=133.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||..|++|+||+|.||+++.++.++|+|||++....... ......++|..|+|||++.+
T Consensus       112 ~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~  190 (292)
T cd06657         112 RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISR  190 (292)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccccCccccCHHHhcC
Confidence            46777888999999999999999999999999999999999999999999987653321 22334578899999999876


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|+||+||++|+|++|.+||.+.+....+..+...+.                             .......
T Consensus       191 ~~-~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~  240 (292)
T cd06657         191 LP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-----------------------------PKLKNLH  240 (292)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC-----------------------------cccCCcc
Confidence            65 78999999999999999999999988776555444432110                             0111223


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++.+.+||.+||..||.+|||+.++|.||||..
T Consensus       241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~  275 (292)
T cd06657         241 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  275 (292)
T ss_pred             cCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhc
Confidence            46778999999999999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0586|consensus

Probab=99.94  E-value=2.1e-28  Score=232.50  Aligned_cols=164  Identities=18%  Similarity=0.285  Sum_probs=142.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .....+..++.++.|++.|++|||+.+|||||||.+|||++.+..+||+|||++..+.  ......++||++.|.|||++
T Consensus       149 ~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--~~~~lqt~cgsppyAaPEl~  226 (596)
T KOG0586|consen  149 HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD--YGLMLQTFCGSPPYAAPELF  226 (596)
T ss_pred             cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec--ccccccccCCCCCccChHhh
Confidence            3445567888999999999999999999999999999999999999999999998775  44567788999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .|..+.++.+|+||+|+++|.|+.|..||.|.+-...-..                                .+...+.+
T Consensus       227 ~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r--------------------------------vl~gk~rI  274 (596)
T KOG0586|consen  227 NGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR--------------------------------VLRGKYRI  274 (596)
T ss_pred             cCcccCCcceehhhhhhhheeeeecccccCCcccccccch--------------------------------heeeeecc
Confidence            9998778899999999999999999999998764332111                                23455677


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      +-..+.++.++|++||..+|.+|++.++++.|.|...+
T Consensus       275 p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  275 PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             cceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence            77888999999999999999999999999999999753

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=2.2e-27  Score=217.64  Aligned_cols=168  Identities=18%  Similarity=0.296  Sum_probs=129.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.|+.|||+.|++|+||+|+||+++.++.++|+|||+++....... .......++..|+|||++
T Consensus       103 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  182 (272)
T cd06629         103 GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVI  182 (272)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHh
Confidence            4678888888999999999999999999999999999999999999999999976432111 122334678899999998


Q ss_pred             hcCC-CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGAR-HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~-~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. .++.++|+||+||++|+|++|..||........+..+......                          ......
T Consensus       183 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~  236 (272)
T cd06629         183 HSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA--------------------------PPIPPD  236 (272)
T ss_pred             ccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC--------------------------CcCCcc
Confidence            7643 3788999999999999999999999755443322222110000                          000011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      .....+..+.+||.+||..+|..|||+.++|+||||
T Consensus       237 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         237 VSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            223567899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.94  E-value=1.3e-27  Score=219.05  Aligned_cols=159  Identities=14%  Similarity=0.161  Sum_probs=126.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||..||+||||||+|||++.++.++|+|||+++........ ......++..|+|||++
T Consensus       107 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  186 (272)
T cd05075         107 QYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESL  186 (272)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHc
Confidence            45778888899999999999999999999999999999999999999999999875432111 11222456789999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |.+||.+......+..+....                               ...
T Consensus       187 ~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  234 (272)
T cd05075         187 ADRV-YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN-------------------------------RLK  234 (272)
T ss_pred             cCCC-cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-------------------------------CCC
Confidence            8765 8999999999999999998 899998876655444432210                               011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.++|.+||..||++|||+.+++.+
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         235 QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            234567789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.94  E-value=1.1e-27  Score=221.79  Aligned_cols=170  Identities=21%  Similarity=0.250  Sum_probs=132.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.|++||||+|+|||++.++.++|+|||++..............+++..|+|||++.
T Consensus       100 ~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  179 (290)
T cd05613         100 ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVR  179 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhcc
Confidence            45788888899999999999999999999999999999999999999999999865432222333467899999999987


Q ss_pred             cCC-CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GAR-HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~-~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. .++.++|||||||++|+|++|..||...........+...+-.                            .....
T Consensus       180 ~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~  231 (290)
T cd05613         180 GGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK----------------------------SEPPY  231 (290)
T ss_pred             CCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc----------------------------cCCCC
Confidence            532 3678999999999999999999999754332222222211000                            00122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      +...++.+.+|+.+||..||..|+     ++.+++.||||....
T Consensus       232 ~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         232 PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            345678899999999999999997     899999999997643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.94  E-value=1.7e-27  Score=220.48  Aligned_cols=157  Identities=16%  Similarity=0.222  Sum_probs=126.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++....... .......++..|+|||++.
T Consensus       116 ~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  195 (288)
T cd05093         116 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  195 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhc
Confidence            478888899999999999999999999999999999999999999999999986532211 1122334577899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |.+||.+.+....+..+....                               ....
T Consensus       196 ~~~-~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~-------------------------------~~~~  243 (288)
T cd05093         196 YRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-------------------------------VLQR  243 (288)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------cCCC
Confidence            765 8999999999999999998 999998877655555443210                               1112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+|+.+||..||.+|||+.+++.
T Consensus       244 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         244 PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            3456778999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.94  E-value=1.4e-27  Score=219.70  Aligned_cols=161  Identities=24%  Similarity=0.414  Sum_probs=134.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-------------------  139 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-------------------  139 (395)
                      ..+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++........                   
T Consensus        97 ~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (280)
T cd05581          97 GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNR  176 (280)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccc
Confidence            3689999999999999999999999999999999999999999999999999886543211                   


Q ss_pred             CCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhh
Q psy2865         140 KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKC  219 (395)
Q Consensus       140 ~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~  219 (395)
                      ......+++..|+|||++.+.. ++.++|+||+||++++|++|..||...+....+..+...                  
T Consensus       177 ~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------------  237 (280)
T cd05581         177 RRFASFVGTAEYVSPELLNEKP-AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL------------------  237 (280)
T ss_pred             cccccccCCccccCHHHhCCCC-CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc------------------
Confidence            1223346788999999988765 788999999999999999999999987755444444321                  


Q ss_pred             hhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCH----HHHHcCCcc
Q psy2865         220 HMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISV----NSALCHPYL  272 (395)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta----~e~L~Hp~f  272 (395)
                                    ...++...++.+.+||.+||..||.+|||+    +++|+||||
T Consensus       238 --------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         238 --------------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             --------------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence                          123445568889999999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.94  E-value=1.2e-27  Score=220.17  Aligned_cols=163  Identities=20%  Similarity=0.213  Sum_probs=131.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus        96 ~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~apE~~~  174 (277)
T cd06640          96 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT-QIKRNTFVGTPFWMAPEVIQ  174 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCC-ccccccccCcccccCHhHhc
Confidence            34677778889999999999999999999999999999999999999999999765432 12233456788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+|||||++|+|++|.+||.+.+.......+..  +.                             .....
T Consensus       175 ~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~~-----------------------------~~~~~  222 (277)
T cd06640         175 QSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--NN-----------------------------PPTLT  222 (277)
T ss_pred             cCC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc--CC-----------------------------CCCCc
Confidence            765 79999999999999999999999987665443332211  00                             01122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..+|.+|||+.+++.||||..
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06640         223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVK  258 (277)
T ss_pred             hhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhh
Confidence            345678899999999999999999999999999965

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.94  E-value=5e-28  Score=207.39  Aligned_cols=156  Identities=16%  Similarity=0.187  Sum_probs=119.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      +..+++..+..++.||+.||.|||+.+      ||+|||++.++.+++  ||+++....      ....||+.|+|||++
T Consensus        11 ~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~------~~~~g~~~y~aPE~~   76 (176)
T smart00750       11 GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP------EQSRVDPYFMAPEVI   76 (176)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc------ccCCCcccccChHHh
Confidence            456899999999999999999999998      999999999999999  999987532      123689999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh-HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ-QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|||++|.+||....... .+..+........+                  ..       ..
T Consensus        77 ~~~~-~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------------------~~-------~~  130 (176)
T smart00750       77 QGQS-YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP------------------RD-------RS  130 (176)
T ss_pred             cCCC-CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc------------------cc-------cc
Confidence            8876 8999999999999999999999997654322 22222211100000                  00       00


Q ss_pred             cCCCCC--HHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         237 LSSQAT--GEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       237 ~~~~~~--~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      .....+  ..+.+||.+||..||.+|||+.+++.|+|+.
T Consensus       131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            001111  3689999999999999999999999999985

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.94  E-value=1.3e-27  Score=229.21  Aligned_cols=159  Identities=19%  Similarity=0.203  Sum_probs=123.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC-cccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA-MTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~-~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||+++......... .....++..|+|||++
T Consensus       207 ~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  286 (374)
T cd05106         207 WPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI  286 (374)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh
Confidence            346777788999999999999999999999999999999999999999999998653322111 1122345679999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|+|++ |..||.+......+..+... +.                             ...
T Consensus       287 ~~~~-~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~-~~-----------------------------~~~  335 (374)
T cd05106         287 FDCV-YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR-GY-----------------------------QMS  335 (374)
T ss_pred             cCCC-CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHc-cc-----------------------------Ccc
Confidence            8765 8999999999999999996 99999876543333222210 00                             011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...++.+.++|.+||..||.+|||+.++++
T Consensus       336 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         336 RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            22345789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.94  E-value=2.6e-27  Score=219.29  Aligned_cols=160  Identities=19%  Similarity=0.268  Sum_probs=126.6

Q ss_pred             CCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhhcCC
Q psy2865          83 SRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMGAR  161 (395)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~~~~  161 (395)
                      ...+..++.||+.|+.|||+.||+||||||+||+++.++.++|+|||+++....... .......++..|+|||.+.+..
T Consensus       118 ~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~  197 (288)
T cd05061         118 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV  197 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCC
Confidence            345567899999999999999999999999999999999999999999986432111 1122234567899999998765


Q ss_pred             CCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCC
Q psy2865         162 HYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQ  240 (395)
Q Consensus       162 ~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (395)
                       ++.++|+||+||++|+|++ |.+||.+.+..+.+..+...                               .....+..
T Consensus       198 -~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~  245 (288)
T cd05061         198 -FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-------------------------------GYLDQPDN  245 (288)
T ss_pred             -CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------------------------CCCCCCCC
Confidence             8999999999999999998 78899887665555444321                               00112334


Q ss_pred             CCHHHHHHHHHccccCCCCCcCHHHHHc------CCcccc
Q psy2865         241 ATGEAVHLLVQMLYFDPTKRISVNSALC------HPYLDE  274 (395)
Q Consensus       241 ~~~~~~dll~~mL~~dP~~R~ta~e~L~------Hp~f~~  274 (395)
                      .++.+.+++.+||..||.+|||+.++++      ||||.+
T Consensus       246 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         246 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            5678999999999999999999999987      999975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.94  E-value=1.8e-27  Score=218.96  Aligned_cols=157  Identities=18%  Similarity=0.235  Sum_probs=124.1

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl~~  159 (395)
                      ++...+..++.|++.|+.|||+.|++|+||||+||+++.++.++|+|||++......... ......++..|+|||++.+
T Consensus       116 ~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05062         116 PSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  195 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc
Confidence            344566778999999999999999999999999999999999999999998754321111 1122345778999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++..+|||||||++|+|++ |..||.+.+....+..+...                               .....+
T Consensus       196 ~~-~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~~  243 (277)
T cd05062         196 GV-FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-------------------------------GLLDKP  243 (277)
T ss_pred             CC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-------------------------------CcCCCC
Confidence            65 8999999999999999998 78999887765555444321                               011223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+..+.+|+.+||..||++|||+.+++.+
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         244 DNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4567789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.94  E-value=2e-27  Score=215.83  Aligned_cols=160  Identities=24%  Similarity=0.298  Sum_probs=129.4

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC-eEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS-SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~-vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.|++.|+.|||+.+++|+||+|.||+++.++. ++|+|||.+...... ........++..|+|||++.
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~~ape~~~  175 (257)
T cd08225          97 LFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS-MELAYTCVGTPYYLSPEICQ  175 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCC-cccccccCCCccccCHHHHc
Confidence            4677888899999999999999999999999999999998754 699999999875432 12223346888999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+||+||++++|++|..||.+.+.......+...                               ......
T Consensus       176 ~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~~  223 (257)
T cd08225         176 NRP-YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG-------------------------------YFAPIS  223 (257)
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-------------------------------cCCCCC
Confidence            765 889999999999999999999999876654443332210                               011223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +..+..+.++|.+||..+|++|||+.+++.||||
T Consensus       224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         224 PNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             CCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            4567789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.94  E-value=1.8e-27  Score=221.32  Aligned_cols=156  Identities=19%  Similarity=0.182  Sum_probs=124.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.||+||||||+|||++.++.+||+|||++......  ........+..|+|||++.+
T Consensus       115 ~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~  192 (297)
T cd05089         115 TLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNY  192 (297)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce--eccCCCCcCccccCchhhcc
Confidence            4677788889999999999999999999999999999999999999999998753211  11111233557999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |..||.+.+....+..+....                               ....+
T Consensus       193 ~~-~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~-------------------------------~~~~~  240 (297)
T cd05089         193 SV-YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-------------------------------RMEKP  240 (297)
T ss_pred             CC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-------------------------------CCCCC
Confidence            65 8999999999999999997 999998877655554432211                               01223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+..+.+||.+||..+|.+|||++++++.
T Consensus       241 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         241 RNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4567889999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.94  E-value=2.6e-27  Score=221.92  Aligned_cols=161  Identities=20%  Similarity=0.185  Sum_probs=130.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||..|++|+||+|+||+++.++.++|+|||++....     ......++..|+|||++.
T Consensus       116 ~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-----~~~~~~~~~~y~aPE~~~  190 (313)
T cd06633         116 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-----PANSFVGTPYWMAPEVIL  190 (313)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-----CCCCccccccccChhhcc
Confidence            457778888899999999999999999999999999999999999999999986432     233457889999999985


Q ss_pred             c--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 G--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +  ...++.++||||+||++|+|++|.+||.+.+....+..+....  ++                            ..
T Consensus       191 ~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~--~~----------------------------~~  240 (313)
T cd06633         191 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND--SP----------------------------TL  240 (313)
T ss_pred             ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CC----------------------------CC
Confidence            2  2347889999999999999999999998877655554442210  00                            00


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .....+..+.+||.+||..+|.+|||+.+++.||||..
T Consensus       241 ~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~  278 (313)
T cd06633         241 QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR  278 (313)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence            11234567899999999999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.94  E-value=2.1e-27  Score=216.44  Aligned_cols=159  Identities=18%  Similarity=0.189  Sum_probs=126.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...++...+..++.|++.|+.|||+.|++||||+|+||+++.++.++|+|||++...............++..|+|||++
T Consensus        97 ~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  176 (261)
T cd05072          97 GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI  176 (261)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHh
Confidence            34567777788999999999999999999999999999999999999999999987543222222333456789999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+.........+.....                               ..
T Consensus       177 ~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~  224 (261)
T cd05072         177 NFGS-FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-------------------------------MP  224 (261)
T ss_pred             ccCC-CChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-------------------------------CC
Confidence            7765 8999999999999999998 9999988766655554432110                               11


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .....+..+.+|+.+||..+|++|||+++++.
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         225 RMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            22346778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.94  E-value=2.1e-27  Score=221.96  Aligned_cols=161  Identities=20%  Similarity=0.204  Sum_probs=129.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||..||+|+||+|.||+++.++.++|+|||++.....     .....++..|+|||++.
T Consensus       110 ~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~  184 (307)
T cd06607         110 KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-----ANSFVGTPYWMAPEVIL  184 (307)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-----CCCccCCccccCceeee
Confidence            3578888889999999999999999999999999999999999999999999875432     23457788999999885


Q ss_pred             c--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 G--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +  ...++.++|||||||++|+|++|.+||.+.+....+..+...  .++.                            .
T Consensus       185 ~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~~----------------------------~  234 (307)
T cd06607         185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPT----------------------------L  234 (307)
T ss_pred             ccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CCCC----------------------------C
Confidence            2  234788999999999999999999999877655543333210  0000                            0


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .....+..+.+||.+||..||.+|||+.+++.||||..
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  272 (307)
T cd06607         235 SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR  272 (307)
T ss_pred             CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence            01224567899999999999999999999999999964

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.94  E-value=2.5e-27  Score=221.08  Aligned_cols=164  Identities=15%  Similarity=0.148  Sum_probs=123.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .......++..|+|||++.
T Consensus       134 ~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (304)
T cd05096         134 AISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL  213 (304)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh
Confidence            345556678999999999999999999999999999999999999999999986532211 1122335577899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc--CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG--RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~--g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.. ++.++|||||||++|+|++  +..||.+.+....+..+...+....                        ......
T Consensus       214 ~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~  268 (304)
T cd05096         214 MGK-FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQG------------------------RQVYLF  268 (304)
T ss_pred             cCC-CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcc------------------------cccccc
Confidence            765 8999999999999999985  5678877665554444332110000                        000112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .++..+..+.+||.+||..||.+|||+.++.+
T Consensus       269 ~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         269 RPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             CCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            33556788999999999999999999999943

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.94  E-value=2.3e-27  Score=215.10  Aligned_cols=162  Identities=22%  Similarity=0.288  Sum_probs=134.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++....... ......++++.|+|||.+
T Consensus        97 ~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~  175 (258)
T cd08215          97 GKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-DLAKTVVGTPYYLSPELC  175 (258)
T ss_pred             CCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-ceecceeeeecccChhHh
Confidence            4678888899999999999999999999999999999999999999999999998654322 223345788899999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|+||+|+++++|++|..||...+.......+...                               ....+
T Consensus       176 ~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~  223 (258)
T cd08215         176 QNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKG-------------------------------QYPPI  223 (258)
T ss_pred             ccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcC-------------------------------CCCCC
Confidence            8765 899999999999999999999999877654443333211                               01123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +...+..+.+++.+||..+|++|||+.++|.||||
T Consensus       224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            34667889999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=2.4e-27  Score=218.42  Aligned_cols=158  Identities=18%  Similarity=0.169  Sum_probs=125.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........ ......++..|+|||++
T Consensus       104 ~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  183 (279)
T cd05109         104 DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI  183 (279)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHh
Confidence            45788888899999999999999999999999999999999999999999999876432111 11222346789999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|||++ |.+||.+.........+.. ..                              ...
T Consensus       184 ~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~------------------------------~~~  231 (279)
T cd05109         184 LHRR-FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GE------------------------------RLP  231 (279)
T ss_pred             ccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CC------------------------------cCC
Confidence            8775 8999999999999999998 8999977655443333221 10                              011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+++.+||..||+.|||+.+++.
T Consensus       232 ~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         232 QPPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            23456778999999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.94  E-value=1.5e-27  Score=216.66  Aligned_cols=159  Identities=24%  Similarity=0.250  Sum_probs=129.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.|+.|||+.||+|+||+|.||+++.++.++|+|||++...... ........++..|+|||++
T Consensus        94 ~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~~aPE~~  172 (255)
T cd08219          94 GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP-GAYACTYVGTPYYVPPEIW  172 (255)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-ccccccccCCccccCHHHH
Confidence            345788888899999999999999999999999999999999999999999999865432 1223345788999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|+||+||++|+|++|..||.+.+....+..+...  .                             ....
T Consensus       173 ~~~~-~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~--~-----------------------------~~~~  220 (255)
T cd08219         173 ENMP-YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG--S-----------------------------YKPL  220 (255)
T ss_pred             ccCC-cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC--C-----------------------------CCCC
Confidence            8765 899999999999999999999999887655544443211  0                             1112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+||.+||..||++|||+.+++.-
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            34567789999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=2.8e-27  Score=218.89  Aligned_cols=169  Identities=23%  Similarity=0.307  Sum_probs=128.8

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +...+++..+..++.||+.||.|||..|++|+||+|+||+++.++.++|+|||++.....   .......++..|+|||+
T Consensus        98 ~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~y~~pE~  174 (287)
T cd06621          98 RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN---SLAGTFTGTSFYMAPER  174 (287)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc---cccccccCCccccCHHH
Confidence            345577888889999999999999999999999999999999999999999999875432   11223467889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh-----HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP-----VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-----~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      +.+.. ++.++||||+||++|+|++|..||.....     .+....+..   ...+.                      +
T Consensus       175 ~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~----------------------~  228 (287)
T cd06621         175 IQGKP-YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN---MPNPE----------------------L  228 (287)
T ss_pred             hcCCC-CCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc---CCchh----------------------h
Confidence            98765 89999999999999999999999986532     121111111   00000                      0


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..........++.+.+||.+||..||.+|||+.|++.||||..
T Consensus       229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         229 KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence            0000000123567899999999999999999999999999964

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.94  E-value=1e-27  Score=222.60  Aligned_cols=165  Identities=23%  Similarity=0.300  Sum_probs=132.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||++.+
T Consensus       111 ~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~  189 (293)
T cd06647         111 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTR  189 (293)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc-cccccccCChhhcCchhhcc
Confidence            46677788899999999999999999999999999999999999999999987654322 22334578889999999877


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|+|||||++|+|++|.+||.+.+...++..+.. .+.+                            ....+.
T Consensus       190 ~~-~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~----------------------------~~~~~~  239 (293)
T cd06647         190 KA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP----------------------------ELQNPE  239 (293)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCC----------------------------CCCCcc
Confidence            65 89999999999999999999999987765444332211 0000                            011223


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..+..+.+||.+||..+|.+||++.+++.|+||...
T Consensus       240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence            456789999999999999999999999999999763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG2345|consensus

Probab=99.94  E-value=2.8e-28  Score=207.62  Aligned_cols=165  Identities=19%  Similarity=0.220  Sum_probs=124.0

Q ss_pred             HHHHhhhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--------CCccc
Q psy2865          75 KEREKKRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--------KAMTQ  144 (395)
Q Consensus        75 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--------~~~~~  144 (395)
                      ..++..++|.+..+++.+|..||.+||...  ++||||||.|||+...+.++|.|||.++.......        +....
T Consensus       118 k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~  197 (302)
T KOG2345|consen  118 KIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAE  197 (302)
T ss_pred             hhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHH
Confidence            345668899999999999999999999998  99999999999999999999999999986432110        11233


Q ss_pred             ccccccccchhhhhcCC--CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         145 EVVTQYYRAPEILMGAR--HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       145 ~~~t~~y~aPEvl~~~~--~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                      .-+|..|||||++....  ..+.++|||||||++|+|+.|..||...         .+.-|...         .+.    
T Consensus       198 e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~~~GgSla---------LAv----  255 (302)
T KOG2345|consen  198 ERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------YQQGGSLA---------LAV----  255 (302)
T ss_pred             HhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------hhcCCeEE---------Eee----
Confidence            46789999999885322  2688999999999999999999999521         11000000         000    


Q ss_pred             hccccCCccchhh--ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         223 RQTRKSQSLSSLY--SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       223 ~~~~~~~~~~~~~--~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                              ...-+  ......+..+..||..||+.||.+||++.+++.+
T Consensus       256 --------~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  256 --------QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             --------eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence                    00001  1123378899999999999999999999999864

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.94  E-value=3.2e-27  Score=217.48  Aligned_cols=159  Identities=16%  Similarity=0.202  Sum_probs=127.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.++|+|||+++....... .......++..|+|||+
T Consensus       116 ~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~  195 (280)
T cd05049         116 MGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPES  195 (280)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhh
Confidence            34577788888999999999999999999999999999999999999999999975432111 11233355778999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|+|++ |..||.+.+....+..+....                               ..
T Consensus       196 ~~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~  243 (280)
T cd05049         196 IMYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR-------------------------------LL  243 (280)
T ss_pred             hccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------------------------cC
Confidence            98876 8999999999999999998 999998777655554443110                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...+..+.+||.+||..||++|||+.+++.
T Consensus       244 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         244 QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            123456788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.94  E-value=5.4e-27  Score=213.93  Aligned_cols=166  Identities=20%  Similarity=0.251  Sum_probs=128.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC---cccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA---MTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~---~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.|++.|+.|||+.||+|+||+|+||+++.++.++|+|||++..........   .....++..|+|||
T Consensus        94 ~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE  173 (264)
T cd06626          94 RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPE  173 (264)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChh
Confidence            457788888899999999999999999999999999999999999999999988754322211   12346788999999


Q ss_pred             hhhcCC--CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         156 ILMGAR--HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       156 vl~~~~--~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ++.+..  .++.++||||+||++|+|++|..||.+............. +..+                           
T Consensus       174 ~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~---------------------------  225 (264)
T cd06626         174 VITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKP---------------------------  225 (264)
T ss_pred             hccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCC---------------------------
Confidence            987643  2688999999999999999999999765433222222111 1100                           


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ........++.+.+||.+||..+|.+|||+.+++.|||+
T Consensus       226 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         226 PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            011112347889999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.94  E-value=3.6e-27  Score=212.94  Aligned_cols=161  Identities=22%  Similarity=0.317  Sum_probs=130.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.+||..|++|+||+|.||+++.++.++|+|||++........  .....++..|+|||++.
T Consensus        93 ~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~  170 (253)
T cd05122          93 QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RNTMVGTPYWMAPEVIN  170 (253)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--ccceecCCcccCHHHHc
Confidence            5678888899999999999999999999999999999999999999999999986543211  34457888999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+||+||++|+|++|..||...+....+..+.. ...+                            .....
T Consensus       171 ~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~----------------------------~~~~~  220 (253)
T cd05122         171 GKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPP----------------------------GLRNP  220 (253)
T ss_pred             CCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCC----------------------------CcCcc
Confidence            765 78999999999999999999999987755444433321 0000                            00111


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      ...+..+.+||.+||..||.+|||+.++|.|||
T Consensus       221 ~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         221 EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             cccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            223678999999999999999999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=2.8e-27  Score=216.87  Aligned_cols=159  Identities=14%  Similarity=0.115  Sum_probs=126.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||+++........ ......++..|+|||++
T Consensus       108 ~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  187 (273)
T cd05035         108 EKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL  187 (273)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhc
Confidence            35778888899999999999999999999999999999999999999999999865432111 11122346689999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++||||+||++|||++ |.+||.+....+.+..+....                               ...
T Consensus       188 ~~~~-~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  235 (273)
T cd05035         188 ADRV-YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN-------------------------------RLK  235 (273)
T ss_pred             ccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------CCC
Confidence            7665 8999999999999999998 999998877655544442210                               112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.+++.+||..||.+|||+.+++.+
T Consensus       236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            334567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.94  E-value=3.5e-27  Score=214.95  Aligned_cols=158  Identities=20%  Similarity=0.229  Sum_probs=126.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.++|+|||++...............++..|+|||++.
T Consensus        97 ~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  176 (260)
T cd05070          97 RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHh
Confidence            34677778899999999999999999999999999999999999999999999865432222222234566799999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |.+||.+.+..+.+..+....                               ....
T Consensus       177 ~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  224 (260)
T cd05070         177 YGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-------------------------------RMPC  224 (260)
T ss_pred             cCC-CcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCC
Confidence            765 8999999999999999998 899998877666555543211                               0122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+|+.+||..||.+|||+++++.
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         225 PQDCPISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             CCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            3456788999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.94  E-value=4.2e-27  Score=214.38  Aligned_cols=161  Identities=24%  Similarity=0.288  Sum_probs=130.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++. +.++|+|||++...... ........++..|+|||.+
T Consensus       100 ~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~~~~pe~~  177 (260)
T cd08222         100 GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS-CDLATTFTGTPYYMSPEAL  177 (260)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-cccccCCCCCcCccCHHHH
Confidence            456888899999999999999999999999999999999975 56999999998765332 1223345678899999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|+||+||++|+|++|..+|.+.+.......+..  +.                             ....
T Consensus       178 ~~~~-~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~-----------------------------~~~~  225 (260)
T cd08222         178 KHQG-YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE--GP-----------------------------TPSL  225 (260)
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--CC-----------------------------CCCC
Confidence            7765 78899999999999999999999987665444433321  10                             1122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +...+..+.+||.+||..||++||++.++++||||
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             cchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            34567789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0193|consensus

Probab=99.94  E-value=1.2e-27  Score=226.43  Aligned_cols=163  Identities=21%  Similarity=0.236  Sum_probs=126.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCC-CCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEP-DPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~-~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +.+|.-.+...|++||++|+.|||..+|||||||..||++..++.|||+|||+|..... .+........|...|||||+
T Consensus       482 etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEv  561 (678)
T KOG0193|consen  482 ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEV  561 (678)
T ss_pred             hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHH
Confidence            36777778888999999999999999999999999999999999999999999864321 12233444567788999999


Q ss_pred             hhcC--CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHH-HhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         157 LMGA--RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLIT-DLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       157 l~~~--~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      +..+  ..|+..+|||||||++|||++|..||...+ .+|+-.++ ...+.|.                           
T Consensus       562 IRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-~dqIifmVGrG~l~pd---------------------------  613 (678)
T KOG0193|consen  562 IRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-RDQIIFMVGRGYLMPD---------------------------  613 (678)
T ss_pred             HhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-hhheEEEecccccCcc---------------------------
Confidence            9643  248999999999999999999999999444 44433222 2111111                           


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +.......+.++.+|+..||.+++++||++.++|.
T Consensus       614 ~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  614 LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            12233456668999999999999999999999886

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.94  E-value=3.3e-27  Score=218.90  Aligned_cols=158  Identities=16%  Similarity=0.218  Sum_probs=126.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.|+.|||..||+||||||+||+++.++.++|+|||+++....... ...+..+++..|+|||++
T Consensus       118 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  197 (291)
T cd05094         118 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI  197 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHh
Confidence            3477788889999999999999999999999999999999999999999999976433211 122334567889999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||...+....+..+....                               ...
T Consensus       198 ~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  245 (291)
T cd05094         198 MYRK-FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR-------------------------------VLE  245 (291)
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCC-------------------------------CCC
Confidence            8765 8999999999999999998 999998776655444332100                               011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+|+.+||..||.+|||+.++++
T Consensus       246 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         246 RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            22345778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.94  E-value=3.6e-27  Score=220.51  Aligned_cols=161  Identities=20%  Similarity=0.202  Sum_probs=129.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||..|++||||+|+||+++.++.++|+|||++.....     .....++..|+|||++.
T Consensus       110 ~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~  184 (308)
T cd06634         110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANXFVGTPYWMAPEVIL  184 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC-----cccccCCccccCHHHHh
Confidence            3477888889999999999999999999999999999999999999999999876432     23457888999999985


Q ss_pred             c--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 G--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +  ...++.++|||||||++|+|++|..||...+....+..+..... +                             ..
T Consensus       185 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~-----------------------------~~  234 (308)
T cd06634         185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-P-----------------------------AL  234 (308)
T ss_pred             hcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-C-----------------------------Cc
Confidence            3  23378899999999999999999999977655444433321100 0                             01


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .....+..+.+||.+||..+|.+|||+.+++.|||+..
T Consensus       235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence            12346678899999999999999999999999999964

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.94  E-value=3.1e-27  Score=214.90  Aligned_cols=158  Identities=18%  Similarity=0.229  Sum_probs=126.1

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.+||+|||+++..............++..|+|||++.+
T Consensus        96 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~  175 (256)
T cd05059          96 KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY  175 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhcc
Confidence            57788888999999999999999999999999999999999999999999998653221111111223457999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |.+||.+.+..+....+.....                               ...+
T Consensus       176 ~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~~  223 (256)
T cd05059         176 SR-FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR-------------------------------LYRP  223 (256)
T ss_pred             CC-CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc-------------------------------CCCC
Confidence            65 8999999999999999998 8999987766555444422110                               1223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+..+.+++.+||..+|++|||+.+++..
T Consensus       224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            4567889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.94  E-value=3.5e-27  Score=214.47  Aligned_cols=158  Identities=17%  Similarity=0.213  Sum_probs=127.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||+++..............++..|+|||++.
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (256)
T cd05114          95 GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFN  174 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcc
Confidence            35778888899999999999999999999999999999999999999999999865322222222334556799999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |.+||.+.+..+.+..+.....                               ...
T Consensus       175 ~~~-~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~-------------------------------~~~  222 (256)
T cd05114         175 FSK-YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR-------------------------------LYR  222 (256)
T ss_pred             cCc-cchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC-------------------------------CCC
Confidence            765 8999999999999999999 9999988877666665543110                               011


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+|+.+||..||.+|||+.++++
T Consensus       223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            2335678899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.94  E-value=4e-27  Score=214.30  Aligned_cols=158  Identities=18%  Similarity=0.188  Sum_probs=127.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.|+.|||..||+||||||.||+++.++.++|+|||++.........  ......++..|+|||+
T Consensus        90 ~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  169 (257)
T cd05116          90 KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPEC  169 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhH
Confidence            46888899999999999999999999999999999999999999999999999865432211  1122234578999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|||++ |.+||.+.+.......+....                               ..
T Consensus       170 ~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~-------------------------------~~  217 (257)
T cd05116         170 MNYYK-FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE-------------------------------RM  217 (257)
T ss_pred             hccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-------------------------------CC
Confidence            87665 8899999999999999997 999998877666555543211                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+||.+||..||++|||++++..
T Consensus       218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            234567889999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.94  E-value=3.4e-27  Score=219.34  Aligned_cols=165  Identities=20%  Similarity=0.211  Sum_probs=128.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.|+.|||+ .||+||||+|+||+++.++.++|+|||++......  .......++..|+|||++
T Consensus       109 ~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~  186 (296)
T cd06618         109 GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS--KAKTRSAGCAAYMAPERI  186 (296)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC--CcccCCCCCccccCHhhc
Confidence            367778888999999999999997 59999999999999999999999999998765322  122333577889999998


Q ss_pred             hcC---CCCCccchHHhHHHHHHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MGA---RHYSAAVDVWSVGCIFAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~~---~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .+.   ..++.++|||||||++|+|++|..||..... .+.+..+....   .                          .
T Consensus       187 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~--------------------------~  237 (296)
T cd06618         187 DPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE---P--------------------------P  237 (296)
T ss_pred             CCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC---C--------------------------C
Confidence            654   2378899999999999999999999976432 23333322110   0                          0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ........+..+.+||.+||..||.+|||+.+++.||||..
T Consensus       238 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  278 (296)
T cd06618         238 SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR  278 (296)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence            00111245778999999999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.94  E-value=3.4e-27  Score=215.96  Aligned_cols=158  Identities=14%  Similarity=0.143  Sum_probs=126.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|++|||+.|++||||+|+|||++.++.++|+|||.+...............++..|+|||++.
T Consensus       102 ~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (266)
T cd05064         102 GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQ  181 (266)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHh
Confidence            45788889999999999999999999999999999999999999999999987653221111111234567899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|+ +|..||.+.+..+.+..+.+...                               ...
T Consensus       182 ~~~-~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  229 (266)
T cd05064         182 YHH-FSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR-------------------------------LPA  229 (266)
T ss_pred             hCC-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-------------------------------CCC
Confidence            765 899999999999999977 59999988877665555432111                               122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+++..||..+|.+|||+.++++
T Consensus       230 ~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         230 PRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            3556788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=3.5e-27  Score=215.39  Aligned_cols=153  Identities=14%  Similarity=0.159  Sum_probs=119.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC-------eEEeeCCcccccCCCCCCCcccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS-------SKICDFGLARVEEPDPNKAMTQEVVTQYY  151 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~-------vKl~DFGla~~~~~~~~~~~~~~~~t~~y  151 (395)
                      ..+++..+..++.||+.|+.|||+.||+||||||+|||++.++.       ++|+|||++....     .....+++..|
T Consensus       100 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~-----~~~~~~~~~~y  174 (262)
T cd05077         100 DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVL-----SRQECVERIPW  174 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCcccc-----Ccccccccccc
Confidence            45788888899999999999999999999999999999986654       8999999987542     12345678889


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS  230 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (395)
                      +|||++.+...++.++|||||||++|+|+ +|..||.+....+.......                              
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~------------------------------  224 (262)
T cd05077         175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEG------------------------------  224 (262)
T ss_pred             cChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhc------------------------------
Confidence            99999875455899999999999999997 68888876543322111100                              


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                         ........+..+.+||.+||..||.+||++.+++++
T Consensus       225 ---~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         225 ---QCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             ---CccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence               011122345678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.94  E-value=2.6e-27  Score=215.48  Aligned_cols=160  Identities=26%  Similarity=0.321  Sum_probs=131.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||..|++|+||+|+||+++.++.++|+|||++.......  ......++..|+|||++.
T Consensus        95 ~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~  172 (258)
T cd05578          95 VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LTTSTSGTPGYMAPEVLC  172 (258)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--cccccCCChhhcCHHHHc
Confidence            467788888999999999999999999999999999999999999999999988654321  233456788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH--hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV--QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~--~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.. ++.++|+||+||++|+|++|..||...+..  +.+.....  .                             ....
T Consensus       173 ~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~-----------------------------~~~~  220 (258)
T cd05578         173 RQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE--T-----------------------------ADVL  220 (258)
T ss_pred             ccC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc--c-----------------------------cccc
Confidence            765 899999999999999999999999877642  21111110  0                             0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCH--HHHHcCCcc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISV--NSALCHPYL  272 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta--~e~L~Hp~f  272 (395)
                      .+...+..+.+||.+||..||.+|+++  .+++.||||
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         221 YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             CcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            334567899999999999999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.94  E-value=4.4e-27  Score=213.96  Aligned_cols=158  Identities=13%  Similarity=0.201  Sum_probs=126.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.|+.|||+.|++|+||+|.||+++.++.+||+|||+++..............++..|+|||++.+
T Consensus        96 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~  175 (256)
T cd05113          96 RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLY  175 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhc
Confidence            57888889999999999999999999999999999999999999999999988654322111222345667999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |..||...+.......+.....                               ...+
T Consensus       176 ~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~~  223 (256)
T cd05113         176 SK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-------------------------------LYRP  223 (256)
T ss_pred             Cc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-------------------------------CCCC
Confidence            65 8999999999999999998 9999987766555444432111                               0122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+..+.+++.+||..||.+|||+.+++.+
T Consensus       224 ~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         224 HLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            3457889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.94  E-value=7.8e-27  Score=211.76  Aligned_cols=160  Identities=19%  Similarity=0.240  Sum_probs=132.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||+.|++|+||+|.||+++.++.++|+|||++......   ......++..|++||.+
T Consensus        97 ~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~~~~Pe~~  173 (256)
T cd08530          97 RKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN---MAKTQIGTPHYMAPEVW  173 (256)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---CcccccCCccccCHHHH
Confidence            456788888899999999999999999999999999999999999999999999876432   22335678899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|+||+||++++|++|..||...+.......+...                               .....
T Consensus       174 ~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~  221 (256)
T cd08530         174 KGRP-YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-------------------------------KYPPI  221 (256)
T ss_pred             CCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------------------CCCCC
Confidence            8765 889999999999999999999999887655443333210                               01122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      +...+.++.++|.+||..+|.+|||+.++|+||++
T Consensus       222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             chhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            33567789999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.7e-27  Score=214.70  Aligned_cols=162  Identities=19%  Similarity=0.268  Sum_probs=130.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC--CCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP--NKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~--~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.|+.|||+.|++|+||+|+||+++.++.++|+|||+++......  ....+...++..|+|||+
T Consensus       101 ~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (264)
T cd06653         101 GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEV  180 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhh
Confidence            346777788899999999999999999999999999999999999999999998643211  112234578999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|+|||||++|+|++|.+||........+..+   ...+.                           ...
T Consensus       181 ~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~---------------------------~~~  229 (264)
T cd06653         181 ISGEG-YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKI---ATQPT---------------------------KPM  229 (264)
T ss_pred             hcCCC-CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHH---HcCCC---------------------------CCC
Confidence            98865 789999999999999999999999866544333322   11111                           112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ++...+..+.+||.+||. +|..|||+.++|.|||.
T Consensus       230 ~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         230 LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             CCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            456678899999999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.94  E-value=3.3e-27  Score=221.56  Aligned_cols=158  Identities=17%  Similarity=0.159  Sum_probs=124.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........ ......++..|+|||++.
T Consensus       105 ~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~  184 (316)
T cd05108         105 NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESIL  184 (316)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhc
Confidence            4566677788999999999999999999999999999999999999999999876432211 112233466899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|||++ |..||.+....+....+....                               ....
T Consensus       185 ~~~-~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  232 (316)
T cd05108         185 HRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-------------------------------RLPQ  232 (316)
T ss_pred             cCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCC-------------------------------CCCC
Confidence            765 8999999999999999997 999998766544322221100                               0112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+++.+||..||..|||+.+++.+
T Consensus       233 ~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         233 PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            34466789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.94  E-value=6.9e-27  Score=213.43  Aligned_cols=158  Identities=19%  Similarity=0.228  Sum_probs=126.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||+++..............++..|+|||++.
T Consensus        97 ~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  176 (262)
T cd05071          97 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL  176 (262)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhc
Confidence            35677788889999999999999999999999999999999999999999999865432221222334567899999988


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |.+||.+......+..+.....                               ...
T Consensus       177 ~~~-~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  224 (262)
T cd05071         177 YGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-------------------------------MPC  224 (262)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC-------------------------------CCC
Confidence            765 8999999999999999999 8899987766555544422110                               012


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ....+..+.+||.+||..||++|||+.+++.
T Consensus       225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         225 PPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            2456778999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.94  E-value=5.2e-27  Score=216.59  Aligned_cols=158  Identities=15%  Similarity=0.208  Sum_probs=126.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.|++.|+.|||+.||+||||||+|||++.++.+||+|||++....... ........++..|+|||++.
T Consensus       120 ~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05090         120 SLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM  199 (283)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhc
Confidence            45667778899999999999999999999999999999999999999999998653221 11223345567899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|+|||||++|+|++ |.+||.+.+....+..+...                               .....
T Consensus       200 ~~~-~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~  247 (283)
T cd05090         200 YGK-FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR-------------------------------QLLPC  247 (283)
T ss_pred             cCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-------------------------------CcCCC
Confidence            765 8999999999999999998 99999887765554444221                               01123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...++.+.+|+..||..||.+||++.+++++
T Consensus       248 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         248 SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            34567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.94  E-value=5.1e-27  Score=216.03  Aligned_cols=158  Identities=14%  Similarity=0.232  Sum_probs=124.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC---CeEEeeCCcccccCCCCC-CCcccccccccccchh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY---SSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~---~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPE  155 (395)
                      .+++..+..++.||+.|+.|||+.|++||||+|+||+++.++   .+||+|||+++....... ........+..|+|||
T Consensus       112 ~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (277)
T cd05036         112 SLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPE  191 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHH
Confidence            467777788999999999999999999999999999998654   599999999986532111 1112223456799999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. ++.++|||||||++|+|++ |..||.+.+....+..+....                               .
T Consensus       192 ~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-------------------------------~  239 (277)
T cd05036         192 AFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG-------------------------------R  239 (277)
T ss_pred             HHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-------------------------------c
Confidence            998776 8999999999999999996 999998877655444432210                               0


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+...+..+.+|+.+||..+|+.|||+.++++|
T Consensus       240 ~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         240 LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            11234567889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.6e-27  Score=211.58  Aligned_cols=159  Identities=28%  Similarity=0.365  Sum_probs=132.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||..+++|+||+|.||+++.++.++|+|||++....... .......++..|+|||++.+
T Consensus        89 ~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~  167 (250)
T cd05123          89 RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTPEYLAPEVLLG  167 (250)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcCCccccChHHhCC
Confidence            57888889999999999999999999999999999999999999999999998653321 22344577889999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++..+|+|||||++|+|++|..||...+....+..+..                                ....++.
T Consensus       168 ~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--------------------------------~~~~~~~  214 (250)
T cd05123         168 KG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--------------------------------DPLRFPE  214 (250)
T ss_pred             CC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--------------------------------CCCCCCC
Confidence            65 78899999999999999999999987765443333321                                1123444


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCH---HHHHcCCcc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISV---NSALCHPYL  272 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta---~e~L~Hp~f  272 (395)
                      ..+..+.+||.+||..||+.|||+   .+++.||||
T Consensus       215 ~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         215 FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            557889999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1167|consensus

Probab=99.94  E-value=2e-27  Score=216.58  Aligned_cols=197  Identities=25%  Similarity=0.333  Sum_probs=140.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCC---------------C---
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPD---------------P---  138 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~---------------~---  138 (395)
                      -..++-..++.|+..++.||.++|..|||||||||+|+|.+ ..+.-.|+|||+|.+....               .   
T Consensus       126 ~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g  205 (418)
T KOG1167|consen  126 YRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMG  205 (418)
T ss_pred             HhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCcccc
Confidence            45566778889999999999999999999999999999998 4567889999999731100               0   


Q ss_pred             ----------------C---------CCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCC-CCCChH
Q psy2865         139 ----------------N---------KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILF-QAQSPV  192 (395)
Q Consensus       139 ----------------~---------~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f-~~~~~~  192 (395)
                                      .         .......||+.||||||+...+.-++++||||.|+|+..++++..|| ...++.
T Consensus       206 ~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~  285 (418)
T KOG1167|consen  206 KDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDA  285 (418)
T ss_pred             CcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCcccc
Confidence                            0         00012479999999999998887899999999999999999888765 566777


Q ss_pred             hHHHHHHHhcCCCCHHHHHhh------hhh---------hhhhhhh---cccc-CCccchhhccCCCCCHHHHHHHHHcc
Q psy2865         193 QQLGLITDLLGTPTPEEMRHA------CDG---------AKCHMLR---QTRK-SQSLSSLYSLSSQATGEAVHLLVQML  253 (395)
Q Consensus       193 ~~l~~i~~~~g~~~~~~~~~~------~~~---------~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~dll~~mL  253 (395)
                      +.+..|+.++|...-.-....      ++.         ..++...   .... ....-....+....+..+.|||.+||
T Consensus       286 ~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~l  365 (418)
T KOG1167|consen  286 DALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCL  365 (418)
T ss_pred             chHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHc
Confidence            888888777764321110000      000         0000000   0000 00001122344556778999999999


Q ss_pred             ccCCCCCcCHHHHHcCCcccc
Q psy2865         254 YFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       254 ~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..||.+|+||+++|.||||..
T Consensus       366 e~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  366 ELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             cCChhhcccHHHHhcCcCCcc
Confidence            999999999999999999975

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.94  E-value=4.5e-27  Score=214.32  Aligned_cols=166  Identities=23%  Similarity=0.284  Sum_probs=132.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||. .|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++
T Consensus        94 ~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~~pE~~  172 (264)
T cd06623          94 GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-DQCNTFVGTVTYMSPERI  172 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC-CcccceeecccccCHhhh
Confidence            567888888999999999999999 999999999999999999999999999998754322 222345678899999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|+|||||++|+|++|.+||...........+..+....                            ....
T Consensus       173 ~~~~-~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~  223 (264)
T cd06623         173 QGES-YSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGP----------------------------PPSL  223 (264)
T ss_pred             CCCC-CCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCC----------------------------CCCC
Confidence            7764 8999999999999999999999998764211111111111110                            0112


Q ss_pred             CCC-CCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQ-ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~-~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +.. .+..+.+||..||..+|+.|||+.++++||||+.
T Consensus       224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             CcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence            233 6788999999999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.94  E-value=4.1e-27  Score=218.36  Aligned_cols=160  Identities=19%  Similarity=0.194  Sum_probs=126.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.|+.|||..||+||||+|.||+++.++.++|+|||+++....... .......++..|+|||+
T Consensus       126 ~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  205 (293)
T cd05053         126 EETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEA  205 (293)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHH
Confidence            34567777888999999999999999999999999999999999999999999986543211 11122234567999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|+|++ |..||.+....+....+....                               ..
T Consensus       206 ~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~  253 (293)
T cd05053         206 LFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY-------------------------------RM  253 (293)
T ss_pred             hccCC-cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-------------------------------cC
Confidence            87765 8999999999999999997 999998876655444432110                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...+..+.+|+.+||..||.+|||+.+++.+
T Consensus       254 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         254 EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            2334567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=7.7e-27  Score=215.14  Aligned_cols=158  Identities=17%  Similarity=0.196  Sum_probs=125.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.|+.|||+.|++||||||+|||++.++.+||+|||+++....... ...+...++..|+|||++
T Consensus       104 ~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~  183 (279)
T cd05111         104 DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI  183 (279)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHh
Confidence            4578888889999999999999999999999999999999999999999999987543221 122334567789999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|||++ |..||.+.........+..  |.                             ...
T Consensus       184 ~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~--~~-----------------------------~~~  231 (279)
T cd05111         184 LFGR-YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK--GE-----------------------------RLA  231 (279)
T ss_pred             ccCC-cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC--CC-----------------------------cCC
Confidence            8765 8999999999999999998 9999987765443322211  00                             001


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+++.+||..||+.|||+.+++.
T Consensus       232 ~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         232 QPQICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            12235567889999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.94  E-value=4.7e-27  Score=217.44  Aligned_cols=169  Identities=21%  Similarity=0.267  Sum_probs=129.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||..|++|+||+|.||+++.++.++|+|||+++..............++..|+|||++.
T Consensus       100 ~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  179 (288)
T cd05583         100 EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIR  179 (288)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhc
Confidence            45777788889999999999999999999999999999999999999999998865432222223356889999999986


Q ss_pred             cCC-CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GAR-HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~-~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. .++.++|+||+||++|+|++|..||...........+....                            .......
T Consensus       180 ~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  231 (288)
T cd05583         180 GGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI----------------------------LKSKPPF  231 (288)
T ss_pred             CCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH----------------------------HccCCCC
Confidence            543 25789999999999999999999996543222211111100                            0001123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcC---HHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRIS---VNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~t---a~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||+.|||   +.++|+||||...
T Consensus       232 ~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         232 PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence            3456788999999999999999998   5678999999764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.7e-27  Score=211.45  Aligned_cols=161  Identities=23%  Similarity=0.279  Sum_probs=132.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.||+|+||+|.||+++.++.++|+|||++....... .......++..|+|||++.
T Consensus        94 ~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~  172 (254)
T cd06627          94 GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS-KDDASVVGTPYWMAPEVIE  172 (254)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc-ccccccccchhhcCHhhhc
Confidence            567888888999999999999999999999999999999999999999999998654321 2223456788999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+||+|+++|+|++|..||...+....+..+..  +                             ....++
T Consensus       173 ~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~-----------------------------~~~~~~  220 (254)
T cd06627         173 MSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ--D-----------------------------DHPPLP  220 (254)
T ss_pred             CCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--c-----------------------------CCCCCC
Confidence            765 78999999999999999999999987664433333211  0                             112234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...+..+.+||.+||..+|++|||+.+++.||||
T Consensus       221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         221 EGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             CCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            5667899999999999999999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.94  E-value=7.3e-27  Score=212.93  Aligned_cols=157  Identities=19%  Similarity=0.209  Sum_probs=125.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||+++..............++..|+|||++.+
T Consensus        98 ~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~  177 (260)
T cd05069          98 YLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY  177 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc
Confidence            35667778899999999999999999999999999999999999999999998654322222223345678999999887


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |.+||.+......+..+.....                               ...+
T Consensus       178 ~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~~  225 (260)
T cd05069         178 GR-FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR-------------------------------MPCP  225 (260)
T ss_pred             CC-cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCCC
Confidence            65 8999999999999999998 9999988776655554432110                               1123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+..+.+|+.+||..||.+|||++++++
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         226 QGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.94  E-value=6.5e-27  Score=224.62  Aligned_cols=160  Identities=18%  Similarity=0.193  Sum_probs=123.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC-cccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA-MTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~-~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......... .....++..|+|||++
T Consensus       209 ~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  288 (375)
T cd05104         209 LALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI  288 (375)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHh
Confidence            356777788899999999999999999999999999999999999999999998654322111 1122345679999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |.+||.+......+..+... +                             ....
T Consensus       289 ~~~~-~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~-----------------------------~~~~  337 (375)
T cd05104         289 FNCV-YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE-G-----------------------------YRML  337 (375)
T ss_pred             cCCC-CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh-C-----------------------------ccCC
Confidence            8876 8999999999999999997 89999776543332222110 0                             0011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.+||..||..||++|||+.++++.
T Consensus       338 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         338 SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            223456789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=6.1e-27  Score=215.49  Aligned_cols=163  Identities=20%  Similarity=0.207  Sum_probs=132.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus        96 ~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~~PE~~~  174 (277)
T cd06641          96 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNTFVGTPFWMAPEVIK  174 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc-hhhhccccCCccccChhhhc
Confidence            35778888899999999999999999999999999999999999999999998765321 11233456788999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++..+|+||+||++|+|++|..||...........+... +                              ...+.
T Consensus       175 ~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~------------------------------~~~~~  222 (277)
T cd06641         175 QSA-YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN-N------------------------------PPTLE  222 (277)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-C------------------------------CCCCC
Confidence            765 788999999999999999999999876554433332110 0                              01123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..+|.+||++.++++||||..
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~  258 (277)
T cd06641         223 GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVR  258 (277)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence            456788999999999999999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.94  E-value=8.8e-27  Score=211.81  Aligned_cols=160  Identities=19%  Similarity=0.225  Sum_probs=131.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||.+........ .......++..|+|||+
T Consensus        99 ~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  178 (262)
T cd00192          99 KSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPES  178 (262)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHH
Confidence            36688899999999999999999999999999999999999999999999999987543211 12334567889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++||||+||++|+|++ |..||.+.+....+..+..  +                             ...
T Consensus       179 ~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~-----------------------------~~~  226 (262)
T cd00192         179 LKDGI-FTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--G-----------------------------YRL  226 (262)
T ss_pred             hccCC-cchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--C-----------------------------CCC
Confidence            98765 8999999999999999998 6999988866555554432  0                             011


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...+..+.+++.+||..||.+|||+.+++.|
T Consensus       227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         227 PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            2345568899999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.94  E-value=6.3e-27  Score=212.77  Aligned_cols=153  Identities=15%  Similarity=0.172  Sum_probs=123.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.|++||||+|+||+++.++.+||+|||++.....    ......++..|+|||++.+
T Consensus        98 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~  173 (256)
T cd05082          98 VLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEALRE  173 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc----cCCCCccceeecCHHHHcc
Confidence            366777788999999999999999999999999999999999999999999886432    1223344668999999877


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++||||+||++|+|++ |.+||...+.......+....                               ....+
T Consensus       174 ~~-~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~~  221 (256)
T cd05082         174 KK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-------------------------------KMDAP  221 (256)
T ss_pred             CC-CCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-------------------------------CCCCC
Confidence            65 8999999999999999997 999998766544444332110                               01233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...++.+.+|+.+||..+|++|||+.+++.
T Consensus       222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         222 DGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            566789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=6.8e-27  Score=215.57  Aligned_cols=157  Identities=14%  Similarity=0.180  Sum_probs=125.4

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.|+.|||+.|++||||||+|||++.++.++|+|||+++....... .......++..|+|||++.
T Consensus       118 ~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (280)
T cd05092         118 QLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL  197 (280)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhc
Confidence            467788889999999999999999999999999999999999999999999976432111 1112234567899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |.+||......+.+..+....                               ....
T Consensus       198 ~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  245 (280)
T cd05092         198 YRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR-------------------------------ELER  245 (280)
T ss_pred             cCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc-------------------------------cCCC
Confidence            876 8999999999999999998 999998766655544442210                               0122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...++.+.+||.+||..||.+|||+.+++.
T Consensus       246 ~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         246 PRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            3456788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=8.6e-27  Score=214.27  Aligned_cols=157  Identities=18%  Similarity=0.260  Sum_probs=126.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.|+.|||+.||+||||+|+||+++.++.+||+|||+++....... .......+|..|+|||++.
T Consensus       115 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05032         115 PPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK  194 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHh
Confidence            356667788999999999999999999999999999999999999999999986533211 1223345678899999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |.+||.+.+....+..+..  +                             .....
T Consensus       195 ~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~--~-----------------------------~~~~~  242 (277)
T cd05032         195 DGV-FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID--G-----------------------------GHLDL  242 (277)
T ss_pred             cCC-CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc--C-----------------------------CCCCC
Confidence            765 8999999999999999998 9999988776555444431  1                             01123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+||.+||..+|++|||+.+++.
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         243 PENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            4456788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=6.7e-27  Score=216.05  Aligned_cols=164  Identities=20%  Similarity=0.216  Sum_probs=127.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      +.+++..+..++.|++.|+.|||+ .|++||||+|+||+++.++.++|+|||++.....   ......++|..|+|||++
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~---~~~~~~~~~~~~~aPE~~  174 (284)
T cd06620          98 GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN---SIADTFVGTSTYMSPERI  174 (284)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhh---hccCccccCcccCCHHHH
Confidence            457888888999999999999997 6999999999999999999999999999875422   122345789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhH--------HHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQ--------LGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~--------l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      .+.. ++.++||||+||++|+|++|..||........        ...+.......                        
T Consensus       175 ~~~~-~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------  229 (284)
T cd06620         175 QGGK-YTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------------------------  229 (284)
T ss_pred             ccCC-CCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------------------------
Confidence            8765 89999999999999999999999986554211        11110000000                        


Q ss_pred             ccchhhccC-CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         230 SLSSLYSLS-SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       230 ~~~~~~~~~-~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                          ...++ ...+..+.+||.+||..||++|||+.++++|+||..
T Consensus       230 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         230 ----PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             ----CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence                00111 125678999999999999999999999999999965

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=7.6e-27  Score=212.86  Aligned_cols=158  Identities=19%  Similarity=0.257  Sum_probs=126.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++...+..++.|++.|+.|||..||+|+||+|+||+++.++.++|+|||++................+..|+|||++.
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  177 (261)
T cd05068          98 RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAAL  177 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccc
Confidence            45778888899999999999999999999999999999999999999999999876422111111222345799999988


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|+|||||++|+|++ |..||.+......+..+.....                               ...
T Consensus       178 ~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  225 (261)
T cd05068         178 YNR-FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR-------------------------------MPC  225 (261)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCC
Confidence            765 8999999999999999998 9999988776655555432111                               112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+|+.+||..+|.+||++.+++.
T Consensus       226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             CCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            2456778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.94  E-value=1.1e-26  Score=218.09  Aligned_cols=161  Identities=20%  Similarity=0.202  Sum_probs=130.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||..||+|+||+|+||+++.++.++|+|||++.....     .....++..|+|||++.
T Consensus       120 ~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~  194 (317)
T cd06635         120 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-----ANSFVGTPYWMAPEVIL  194 (317)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----cccccCCccccChhhhh
Confidence            4477788888999999999999999999999999999999999999999999875321     23457888999999985


Q ss_pred             c--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 G--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +  ...++.++||||+||++|+|++|.+||.+.+....+..+......                              ..
T Consensus       195 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~  244 (317)
T cd06635         195 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP------------------------------TL  244 (317)
T ss_pred             cCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC------------------------------CC
Confidence            3  234788999999999999999999999876655555444321100                              01


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .....+..+.+||.+||..+|.+|||+.+++.|+|+..
T Consensus       245 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         245 QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            12345677899999999999999999999999999954

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.94  E-value=7.9e-27  Score=212.62  Aligned_cols=159  Identities=19%  Similarity=0.217  Sum_probs=127.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...............++..|+|||++
T Consensus        96 ~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~  175 (260)
T cd05067          96 GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI  175 (260)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHh
Confidence            34567778888999999999999999999999999999999999999999999986542222222233456789999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |.+||.+.+....+..+.....                               ..
T Consensus       176 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~  223 (260)
T cd05067         176 NYGT-FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR-------------------------------MP  223 (260)
T ss_pred             ccCC-cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC-------------------------------CC
Confidence            7765 8999999999999999998 9999988776555544432111                               11


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+||.+||..+|++|||+++++.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         224 RPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            22445678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.93  E-value=4.9e-27  Score=219.09  Aligned_cols=156  Identities=19%  Similarity=0.203  Sum_probs=123.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.|+.|||+.||+||||||+|||++.++.++|+|||++.....  ........++..|+|||++.+
T Consensus       120 ~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~  197 (303)
T cd05088         120 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNY  197 (303)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccch--hhhcccCCCcccccCHHHHhc
Confidence            567778889999999999999999999999999999999999999999999864321  111111234567999999877


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |.+||.+.+..+....+....                               ....+
T Consensus       198 ~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~~  245 (303)
T cd05088         198 SV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-------------------------------RLEKP  245 (303)
T ss_pred             cC-CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-------------------------------cCCCC
Confidence            65 8999999999999999998 999998776554443331100                               00122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...++.+.+||.+||..+|+.|||++++|.+
T Consensus       246 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         246 LNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3467789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1989|consensus

Probab=99.93  E-value=3.7e-27  Score=232.83  Aligned_cols=155  Identities=21%  Similarity=0.327  Sum_probs=124.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCc--------ccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAM--------TQEVV  147 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~--------~~~~~  147 (395)
                      ...|+|.++..|+.|++.|+++||...  |||||||-+||||+.++..||||||.|+-.........        -....
T Consensus       138 q~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~T  217 (738)
T KOG1989|consen  138 QTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYT  217 (738)
T ss_pred             hccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhC
Confidence            344999999999999999999999987  99999999999999999999999999985332221000        01245


Q ss_pred             cccccchhhhh---cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc
Q psy2865         148 TQYYRAPEILM---GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ  224 (395)
Q Consensus       148 t~~y~aPEvl~---~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  224 (395)
                      |+.|||||+|-   |.+ .+.++|||+|||+||-|+....||.......+                              
T Consensus       218 Tp~YRsPEMIDlysg~p-I~eKsDIWALGclLYkLCy~t~PFe~sg~laI------------------------------  266 (738)
T KOG1989|consen  218 TPQYRSPEMIDLYSGLP-IGEKSDIWALGCLLYKLCYFTTPFEESGKLAI------------------------------  266 (738)
T ss_pred             CccccChHHHhhhcCCC-CcchhHHHHHHHHHHHHHHhCCCcCcCcceeE------------------------------
Confidence            89999999883   444 79999999999999999999999976532211                              


Q ss_pred             cccCCccchhhccC--CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         225 TRKSQSLSSLYSLS--SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       225 ~~~~~~~~~~~~~~--~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                            +..-|.+|  +..+..+.+||..||+.||++||++-|++.+
T Consensus       267 ------lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  267 ------LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             ------EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence                  12233444  4678899999999999999999999998774

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.93  E-value=1.4e-26  Score=217.01  Aligned_cols=158  Identities=20%  Similarity=0.178  Sum_probs=125.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..++...+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||+++....... .......++..|+|||++
T Consensus       129 ~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  208 (314)
T cd05099         129 EQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEAL  208 (314)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHH
Confidence            3466667778899999999999999999999999999999999999999999986532111 111222344679999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+.+..+.+..+....                               ...
T Consensus       209 ~~~~-~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  256 (314)
T cd05099         209 FDRV-YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGH-------------------------------RMD  256 (314)
T ss_pred             ccCC-cCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------CCC
Confidence            8765 8999999999999999998 899998877666555443210                               012


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+|+.+||..||..|||+.+++.
T Consensus       257 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         257 KPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            33456778999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.93  E-value=9.6e-27  Score=213.37  Aligned_cols=155  Identities=19%  Similarity=0.202  Sum_probs=122.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||+.|++||||||+||+++.++.+||+|||++......  ........+..|+|||++.+
T Consensus       108 ~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--~~~~~~~~~~~y~apE~~~~  185 (270)
T cd05047         108 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNY  185 (270)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh--hhccCCCCccccCChHHHcc
Confidence            4677788899999999999999999999999999999999999999999998643211  11111233567999999877


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |..||.+.+..+.+..+....                               ....+
T Consensus       186 ~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-------------------------------~~~~~  233 (270)
T cd05047         186 SV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-------------------------------RLEKP  233 (270)
T ss_pred             CC-CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-------------------------------CCCCC
Confidence            65 8999999999999999996 999998766554444332100                               01123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+..+.+|+.+||..||.+|||+.+++.
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         234 LNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            346778999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.8e-26  Score=209.93  Aligned_cols=157  Identities=13%  Similarity=0.169  Sum_probs=125.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcc--cccccccccchhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMT--QEVVTQYYRAPEIL  157 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~--~~~~t~~y~aPEvl  157 (395)
                      .+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||+++...........  ...++..|+|||.+
T Consensus        91 ~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  170 (257)
T cd05060          91 EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECI  170 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHh
Confidence            6788888999999999999999999999999999999999999999999999876432211111  11224579999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |.+||...+..+....+....                               ...
T Consensus       171 ~~~~-~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  218 (257)
T cd05060         171 NYGK-FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE-------------------------------RLP  218 (257)
T ss_pred             cCCC-CCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-------------------------------cCC
Confidence            8765 8999999999999999997 999998776655444432210                               012


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.++|.+||..||.+|||+.++++
T Consensus       219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         219 RPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            33456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.93  E-value=1.2e-26  Score=215.52  Aligned_cols=164  Identities=14%  Similarity=0.175  Sum_probs=126.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++....... .......+|..|+|||++.
T Consensus       126 ~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (296)
T cd05051         126 SLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL  205 (296)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh
Confidence            577888889999999999999999999999999999999999999999999986432211 1223345677899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc--CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG--RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~--g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.. ++.++|||||||++|+|++  |..||...+..+.+..+........                        ......
T Consensus       206 ~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~  260 (296)
T cd05051         206 LGK-FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDG------------------------RQIYLP  260 (296)
T ss_pred             cCC-CCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccccc------------------------ccccCC
Confidence            765 8999999999999999997  7788877665555544433211000                        001112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+|+.+||..||.+|||+.++++
T Consensus       261 ~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         261 RPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             CccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            23456788999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.93  E-value=1.5e-26  Score=210.75  Aligned_cols=157  Identities=16%  Similarity=0.208  Sum_probs=127.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++...+..++.||+.|+.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.
T Consensus        99 ~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-~~~~~~~~~~~~~~PE~~~  177 (261)
T cd05148          99 QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-YLSSDKKIPYKWTAPEAAS  177 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc-ccccCCCCceEecCHHHHc
Confidence            456777788899999999999999999999999999999999999999999998654322 1122334567899999997


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.+..+.+..+.....                               ...
T Consensus       178 ~~~-~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  225 (261)
T cd05148         178 HGT-FSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR-------------------------------MPC  225 (261)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc-------------------------------CCC
Confidence            765 8999999999999999998 8999988776666555542111                               123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...++.+.+++.+||..||.+|||+.++++
T Consensus       226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         226 PAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            3566788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.93  E-value=1.2e-26  Score=214.64  Aligned_cols=165  Identities=24%  Similarity=0.344  Sum_probs=132.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++...+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.
T Consensus       111 ~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~  189 (286)
T cd06614         111 VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-SKRNSVVGTPYWMAPEVIK  189 (286)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-hhhccccCCcccCCHhHhc
Confidence            378888889999999999999999999999999999999999999999999987543221 1223345788999999988


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+|||||++|+|++|..||...+.......+... +.+                            .....
T Consensus       190 ~~~-~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~----------------------------~~~~~  239 (286)
T cd06614         190 RKD-YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIP----------------------------PLKNP  239 (286)
T ss_pred             CCC-CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCC----------------------------CCcch
Confidence            765 899999999999999999999999877655444433210 000                            00112


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..+|..|||+.++|.|+||..
T Consensus       240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             hhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence            235678999999999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.93  E-value=1.3e-26  Score=210.92  Aligned_cols=159  Identities=16%  Similarity=0.158  Sum_probs=126.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.|+.|||..|++||||||+|||++.++.+||+|||++.........  ..+...++..|+|||
T Consensus        89 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  168 (257)
T cd05115          89 KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPE  168 (257)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHH
Confidence            346788889999999999999999999999999999999999999999999999865432211  112223356899999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. ++.++|||||||++|+|++ |..||.+....+.+..+....                               .
T Consensus       169 ~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~  216 (257)
T cd05115         169 CINFRK-FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK-------------------------------R  216 (257)
T ss_pred             HHccCC-CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-------------------------------C
Confidence            988765 8999999999999999996 999998877665544442210                               0


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+...++.+.++|.+||..||++||++.++++
T Consensus       217 ~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         217 LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            1234566889999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.93  E-value=1.3e-26  Score=214.73  Aligned_cols=158  Identities=18%  Similarity=0.175  Sum_probs=125.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||+.||+||||+|+|||++.++.++|+|||+++........ ......++..|+|||++
T Consensus       122 ~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~  201 (290)
T cd05045         122 RALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL  201 (290)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHH
Confidence            34677778899999999999999999999999999999999999999999999864322111 11223456789999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++++|++ |..||.+.........+.....                               ..
T Consensus       202 ~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~  249 (290)
T cd05045         202 FDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR-------------------------------ME  249 (290)
T ss_pred             ccCC-cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC-------------------------------CC
Confidence            8765 8999999999999999998 9999988765554443321110                               11


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+|+..||..||.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         250 RPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            23456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.93  E-value=1.8e-26  Score=209.33  Aligned_cols=163  Identities=21%  Similarity=0.296  Sum_probs=131.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||.+......... ......++..|+|||++.
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  176 (260)
T cd06606          97 KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR  176 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhc
Confidence            7888888999999999999999999999999999999999999999999999875432110 133457888999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|+|||||++|+|++|..||....  .....+..+..                           .......+
T Consensus       177 ~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~---------------------------~~~~~~~~  226 (260)
T cd06606         177 GEE-YGRAADIWSLGCTVIEMATGKPPWSELG--NPMAALYKIGS---------------------------SGEPPEIP  226 (260)
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHhccc---------------------------cCCCcCCC
Confidence            765 7999999999999999999999998766  22222211110                           00112344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ...+..+.+||.+||..||.+|||+.+++.||||
T Consensus       227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             cccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            5568899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.93  E-value=1.7e-26  Score=215.56  Aligned_cols=158  Identities=17%  Similarity=0.167  Sum_probs=125.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||+++........ ......+++.|+|||++.
T Consensus       133 ~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  212 (304)
T cd05101         133 QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALF  212 (304)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhc
Confidence            4555666778999999999999999999999999999999999999999999865432111 122334567899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..+|.+.+..+....+....                               ....
T Consensus       213 ~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  260 (304)
T cd05101         213 DRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-------------------------------RMDK  260 (304)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-------------------------------cCCC
Confidence            765 8999999999999999997 888998877655555442210                               0112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+||.+||..+|.+|||+.++++.
T Consensus       261 ~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         261 PANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             CCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            34567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.5e-26  Score=210.75  Aligned_cols=158  Identities=22%  Similarity=0.260  Sum_probs=126.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++...+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++................+..|+|||++.
T Consensus        98 ~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  177 (261)
T cd05034          98 KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAAN  177 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhc
Confidence            35777788899999999999999999999999999999999999999999999865422111111223456799999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |..||.+.+....+..+......                               ..
T Consensus       178 ~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------~~  225 (261)
T cd05034         178 YGR-FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM-------------------------------PR  225 (261)
T ss_pred             cCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------------------------CC
Confidence            765 8999999999999999998 99999887766666655332111                               12


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+++.+||..+|.+|||+.++++
T Consensus       226 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         226 PPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            2345678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.93  E-value=1.6e-26  Score=216.08  Aligned_cols=158  Identities=19%  Similarity=0.184  Sum_probs=124.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++....... .......++..|+|||++.
T Consensus       136 ~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  215 (307)
T cd05098         136 QLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  215 (307)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhc
Confidence            466677788999999999999999999999999999999999999999999976532111 1112223456899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |.+||.+.+..+....+...                               .....
T Consensus       216 ~~~-~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~  263 (307)
T cd05098         216 DRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-------------------------------HRMDK  263 (307)
T ss_pred             cCC-CCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcC-------------------------------CCCCC
Confidence            765 8999999999999999998 88999776654433333210                               01123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+||.+||..+|..|||+.+++.+
T Consensus       264 ~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         264 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            44567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.9e-26  Score=225.41  Aligned_cols=175  Identities=16%  Similarity=0.125  Sum_probs=120.7

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      ++...++.++.|++.||.|||..+|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++...
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~  385 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMP  385 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCC
Confidence            45556778999999999999999999999999999999999999999999976433221122223457899999988532


Q ss_pred             CC-------------------C--CccchHHhHHHHHHHHHcCCC-CCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhh
Q psy2865         161 RH-------------------Y--SAAVDVWSVGCIFAELLGRRI-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAK  218 (395)
Q Consensus       161 ~~-------------------~--~~~~DiWSlG~il~ell~g~~-~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~  218 (395)
                      ..                   |  ...+||||+|||+|+|++|.. +|.+..........   ..               
T Consensus       386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~---~~---------------  447 (507)
T PLN03224        386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ---YD---------------  447 (507)
T ss_pred             CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh---cc---------------
Confidence            10                   1  224799999999999999875 66543221110000   00               


Q ss_pred             hhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCC---CCCcCHHHHHcCCcccc
Q psy2865         219 CHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDP---TKRISVNSALCHPYLDE  274 (395)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP---~~R~ta~e~L~Hp~f~~  274 (395)
                       ..+..|.........+......++.+.||+.+||..+|   .+|+||.|+|+||||..
T Consensus       448 -~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        448 -NDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             -chHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence             00000000000011123456678999999999999876   68999999999999953

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.93  E-value=2.3e-26  Score=210.72  Aligned_cols=158  Identities=19%  Similarity=0.217  Sum_probs=126.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||+++..........+...++..|+|||++.
T Consensus       102 ~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (270)
T cd05056         102 YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESIN  181 (270)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhc
Confidence            35788888899999999999999999999999999999999999999999999865432111122223456799999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.+..+.+..+....                               ....
T Consensus       182 ~~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-------------------------------~~~~  229 (270)
T cd05056         182 FRR-FTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-------------------------------RLPM  229 (270)
T ss_pred             cCC-CCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-------------------------------cCCC
Confidence            765 8999999999999999985 999998887665554442210                               0123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+||.+||..+|++|||+.+++.
T Consensus       230 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         230 PPNCPPTLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            4566789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.93  E-value=2.5e-26  Score=209.42  Aligned_cols=156  Identities=15%  Similarity=0.167  Sum_probs=119.5

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccccccccchhhh
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~t~~y~aPEvl  157 (395)
                      ++...+..++.||+.|+.|||+.|++||||+|+|||++.++.+||+|||+++.......   .......++..|+|||++
T Consensus        95 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  174 (262)
T cd05058          95 PTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESL  174 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHh
Confidence            34455667889999999999999999999999999999999999999999986432111   111233456789999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|||++ |.++|...+..+....+..  +.                             ...
T Consensus       175 ~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~--~~-----------------------------~~~  222 (262)
T cd05058         175 QTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ--GR-----------------------------RLL  222 (262)
T ss_pred             ccCc-cchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--CC-----------------------------CCC
Confidence            8765 8999999999999999998 5777876655443333221  00                             011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+++.+||..+|++|||+.+++.
T Consensus       223 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         223 QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            12345678999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.93  E-value=2.3e-26  Score=208.90  Aligned_cols=159  Identities=18%  Similarity=0.195  Sum_probs=126.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...............++..|+|||++.
T Consensus        95 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~  174 (256)
T cd05112          95 GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFS  174 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhc
Confidence            35677888899999999999999999999999999999999999999999998764322111122234567899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |.+||........+..+.....                               ...
T Consensus       175 ~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  222 (256)
T cd05112         175 FSK-YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR-------------------------------LYK  222 (256)
T ss_pred             cCC-cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC-------------------------------CCC
Confidence            765 8999999999999999998 9999987776555544422110                               011


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+|+.+||..+|.+|||+.+++++
T Consensus       223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         223 PRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             CCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            23356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.93  E-value=2.9e-26  Score=209.62  Aligned_cols=159  Identities=17%  Similarity=0.220  Sum_probs=126.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.|+.|||+.||+|+||+|+||+++.++.++|+|||+++........ ......++..|+|||.+
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~  180 (266)
T cd05033         101 GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI  180 (266)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhh
Confidence            36788888899999999999999999999999999999999999999999999876421111 11122345689999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||...........+.....                               ..
T Consensus       181 ~~~~-~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~  228 (266)
T cd05033         181 AYRK-FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR-------------------------------LP  228 (266)
T ss_pred             ccCC-CccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-------------------------------CC
Confidence            7765 8999999999999999997 9999977665554444432110                               01


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.+|+.+||..+|++|||+.+++++
T Consensus       229 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         229 PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            224567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG1027|consensus

Probab=99.93  E-value=5.8e-27  Score=228.91  Aligned_cols=159  Identities=26%  Similarity=0.313  Sum_probs=123.6

Q ss_pred             CCCchhhHHhhcCCCCccccCccccCCCCCceeecC---C--CCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          84 RRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---T--YSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        84 ~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~--~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ......+.|++.||++||+.+||||||||+||||..   +  ..++|+|||++..+..+..  .+.....||-.|+|||+
T Consensus       606 i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~  685 (903)
T KOG1027|consen  606 IDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQ  685 (903)
T ss_pred             ccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHH
Confidence            445678999999999999999999999999999986   3  4689999999998765432  23556689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.... -+.++||+|+||++|+.++| ..||...-  +.-..|..  |..                           .+.
T Consensus       686 L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~--~~~---------------------------~L~  733 (903)
T KOG1027|consen  686 LREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILT--GNY---------------------------TLV  733 (903)
T ss_pred             Hhccc-cCcccchhhcCceEEEEecCCccCCCchH--Hhhhhhhc--Ccc---------------------------cee
Confidence            98876 57899999999999988865 89995432  22222321  100                           112


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .+.+....++.|||.+||.++|..||+|.++|.||+|-.
T Consensus       734 ~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~  772 (903)
T KOG1027|consen  734 HLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD  772 (903)
T ss_pred             eeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence            222333338999999999999999999999999999955

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=2.1e-26  Score=209.65  Aligned_cols=152  Identities=17%  Similarity=0.153  Sum_probs=119.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC--------eEEeeCCcccccCCCCCCCcccccccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS--------SKICDFGLARVEEPDPNKAMTQEVVTQYY  151 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~--------vKl~DFGla~~~~~~~~~~~~~~~~t~~y  151 (395)
                      .+++..+..++.||+.|+.|||+.||+||||||+||+++.++.        ++|+|||++.....     .....++..|
T Consensus        96 ~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-----~~~~~~~~~y  170 (258)
T cd05078          96 LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-----KEILLERIPW  170 (258)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC-----chhccccCCc
Confidence            5677778889999999999999999999999999999987654        69999999875432     2234678899


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS  230 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (395)
                      +|||++.+...++.++||||+||++|+|++| .+||...+..........                              
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~------------------------------  220 (258)
T cd05078         171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED------------------------------  220 (258)
T ss_pred             cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc------------------------------
Confidence            9999998755589999999999999999998 466665544332221110                              


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                         ...++...+..+.+||.+||+.||++|||++++++.
T Consensus       221 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         221 ---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ---cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence               012334455788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.93  E-value=2.1e-26  Score=235.73  Aligned_cols=99  Identities=27%  Similarity=0.337  Sum_probs=80.9

Q ss_pred             cccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcc
Q psy2865         146 VVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQT  225 (395)
Q Consensus       146 ~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  225 (395)
                      +||+.|||||++++.. |+.++|||||||++|||++|.+||.+......+..|......+                    
T Consensus       541 vGT~~Y~APE~l~~~~-~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~--------------------  599 (669)
T cd05610         541 LGTPDYLAPELLLGKP-HGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPW--------------------  599 (669)
T ss_pred             eeCccccCHHHcCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC--------------------
Confidence            5699999999999876 8999999999999999999999999888776666553211000                    


Q ss_pred             ccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         226 RKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                               .......+..+.+++..||.+||.+||||.++|+||||..
T Consensus       600 ---------p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~  639 (669)
T cd05610         600 ---------PEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHG  639 (669)
T ss_pred             ---------CcccccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcC
Confidence                     0111245778999999999999999999999999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.93  E-value=3.4e-26  Score=207.23  Aligned_cols=157  Identities=20%  Similarity=0.221  Sum_probs=123.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCc-ccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAM-TQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~-~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.|++.|+.|||..|++||||+|+||+++.++.++|+|||++........... .....+..|+|||++.
T Consensus        89 ~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  168 (251)
T cd05041          89 RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALN  168 (251)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhc
Confidence            467777788999999999999999999999999999999999999999999986432111111 1123356799999988


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++..+||||+||++|+|++ |..||.+.........+....+                               ...
T Consensus       169 ~~~-~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  216 (251)
T cd05041         169 YGR-YTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYR-------------------------------MPA  216 (251)
T ss_pred             cCC-CCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCC-------------------------------CCC
Confidence            765 8999999999999999998 8899987765444433321110                               112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+|+.+||..+|.+|||+.++|+
T Consensus       217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             CccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            3456778999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.93  E-value=2.1e-26  Score=212.20  Aligned_cols=158  Identities=19%  Similarity=0.199  Sum_probs=126.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.||.|||+.+++||||+|+||+++.++.+||+|||+++.+...... ......++..|+|||++
T Consensus       112 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~  191 (280)
T cd05043         112 QALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESL  191 (280)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHH
Confidence            46788888999999999999999999999999999999999999999999999865332111 11223456779999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++||||+||++|+|++ |.+||...+..+....+....                               ...
T Consensus       192 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  239 (280)
T cd05043         192 VNKE-YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-------------------------------RLA  239 (280)
T ss_pred             hcCC-CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-------------------------------CCC
Confidence            8775 8999999999999999998 999998776655433332110                               011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...++.+.+++.+||..||+.|||+.+++.
T Consensus       240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         240 QPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            22345678999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.93  E-value=3.6e-26  Score=208.37  Aligned_cols=158  Identities=20%  Similarity=0.239  Sum_probs=124.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++...+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++...............++..|+|||++.
T Consensus        97 ~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  176 (260)
T cd05073          97 SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhc
Confidence            34566677889999999999999999999999999999999999999999999765432222222234567799999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|+|||||++|+|++ |.+||.+.+.......+.....                               ...
T Consensus       177 ~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  224 (260)
T cd05073         177 FGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-------------------------------MPR  224 (260)
T ss_pred             cCC-cCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC-------------------------------CCC
Confidence            765 8999999999999999998 9999988766555444322110                               112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+++.+||..+|++||++.+++.
T Consensus       225 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         225 PENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             cccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            2456778999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.93  E-value=3.6e-26  Score=211.51  Aligned_cols=157  Identities=18%  Similarity=0.209  Sum_probs=124.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.||.|||..|++||||+|+||+++.++.++|+|||++........ ........+..|+|||++.
T Consensus       126 ~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (288)
T cd05050         126 PLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF  205 (288)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHh
Confidence            356677788999999999999999999999999999999999999999999876432211 1122234566799999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.+..+.+..+...                               .....
T Consensus       206 ~~~-~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~  253 (288)
T cd05050         206 YNR-YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDG-------------------------------NVLSC  253 (288)
T ss_pred             cCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-------------------------------CCCCC
Confidence            765 8999999999999999997 88888877665544443210                               01122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+||.+||..||.+|||+.|+++
T Consensus       254 ~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         254 PDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            3456788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.93  E-value=3.4e-26  Score=207.42  Aligned_cols=158  Identities=20%  Similarity=0.215  Sum_probs=122.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC-cccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA-MTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~-~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......... ......+..|+|||++
T Consensus        89 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  168 (252)
T cd05084          89 PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEAL  168 (252)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhh
Confidence            346777888999999999999999999999999999999999999999999987543211110 1111224569999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++||||+||++|+|++ |.+||...+.......+....                               ...
T Consensus       169 ~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  216 (252)
T cd05084         169 NYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV-------------------------------RLP  216 (252)
T ss_pred             cCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC-------------------------------CCC
Confidence            8765 8999999999999999997 889997665544333332110                               012


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+|+.+||..+|++|||+.++++
T Consensus       217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            23455778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.93  E-value=4.8e-26  Score=206.98  Aligned_cols=159  Identities=18%  Similarity=0.145  Sum_probs=127.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.||.|||..|++|+||+|+||+++.++.+||+|||++.........  ......++..|+|||+
T Consensus        92 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~  171 (257)
T cd05040          92 GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPES  171 (257)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHH
Confidence            45778888889999999999999999999999999999999999999999999875432111  1122456778999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|+|++ |..||...+..+.+..+....                              ...
T Consensus       172 ~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------------------------------~~~  220 (257)
T cd05040         172 LRTRT-FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG------------------------------ERL  220 (257)
T ss_pred             hcccC-cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC------------------------------CcC
Confidence            88765 8999999999999999998 999998777666555543210                              001


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...+..+.+++.+||..+|.+|||+.++++
T Consensus       221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            122345678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.93  E-value=3.2e-26  Score=213.50  Aligned_cols=157  Identities=19%  Similarity=0.204  Sum_probs=123.9

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl~~  159 (395)
                      +++..+..++.|++.|+.|||+.||+|+||+|+|||++.++.++|+|||++......... ......++..|+|||++.+
T Consensus       138 l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  217 (302)
T cd05055         138 LTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN  217 (302)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc
Confidence            788888899999999999999999999999999999999999999999999865322111 1122345678999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++||||+||++|+|++ |.+||.+......+..+... +.                             ....+
T Consensus       218 ~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~-~~-----------------------------~~~~~  266 (302)
T cd05055         218 CV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE-GY-----------------------------RMAQP  266 (302)
T ss_pred             CC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc-CC-----------------------------cCCCC
Confidence            76 8999999999999999998 99999876654433332210 00                             00122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+..+.+|+.+||..+|++|||+.+++.
T Consensus       267 ~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         267 EHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            345788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG1006|consensus

Probab=99.93  E-value=2.9e-27  Score=203.30  Aligned_cols=169  Identities=17%  Similarity=0.189  Sum_probs=135.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...++|.....+.-..+.||.||-.. .|||||+||+|||++..|.|||||||++..+...  -..+...|.+.|||||.
T Consensus       161 ~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S--iAkT~daGCrpYmAPER  238 (361)
T KOG1006|consen  161 KSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS--IAKTVDAGCRPYMAPER  238 (361)
T ss_pred             hccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH--HHhhhccCCccccChhc
Confidence            45678888888888889999999865 8999999999999999999999999998765432  23455688999999999


Q ss_pred             hhcCCC-CCccchHHhHHHHHHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         157 LMGARH-YSAAVDVWSVGCIFAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       157 l~~~~~-~~~~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +..... |+..+|+||||++|||++||..|+.+.+. .+|+..++  .|.|+.-..                        
T Consensus       239 i~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv--~gdpp~l~~------------------------  292 (361)
T KOG1006|consen  239 IDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV--IGDPPILLF------------------------  292 (361)
T ss_pred             cCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH--cCCCCeecC------------------------
Confidence            864333 89999999999999999999999998765 46666554  344442110                        


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..-....+..++.||.-||..|-+.||...+++.+||+..
T Consensus       293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  293 DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             cccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence            0011346788999999999999999999999999999965

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.93  E-value=5.1e-26  Score=205.92  Aligned_cols=158  Identities=16%  Similarity=0.188  Sum_probs=124.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|+|..|++|+||+|+||+++.++.++|+|||++...............++..|+|||++.
T Consensus        88 ~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  167 (250)
T cd05085          88 DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALN  167 (250)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhc
Confidence            34677888889999999999999999999999999999999999999999999764322111112223456799999997


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.........+....                               ....
T Consensus       168 ~~~-~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  215 (250)
T cd05085         168 YGR-YSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY-------------------------------RMSC  215 (250)
T ss_pred             cCC-CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCC
Confidence            765 8899999999999999998 999998776554433332110                               0122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+|+.+||..+|++|||+.++++
T Consensus       216 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         216 PQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            3456789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.93  E-value=3.3e-26  Score=216.42  Aligned_cols=159  Identities=18%  Similarity=0.172  Sum_probs=125.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.|++.||.|||..||+||||+|+|||++.++.+||+|||+++....... .......++..|+|||++.
T Consensus       130 ~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  209 (334)
T cd05100         130 QLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALF  209 (334)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhc
Confidence            345555667899999999999999999999999999999999999999999986532111 1122233456799999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.+..+.+..+....                               ....
T Consensus       210 ~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  257 (334)
T cd05100         210 DRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH-------------------------------RMDK  257 (334)
T ss_pred             cCC-cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCC
Confidence            765 8999999999999999998 889998877666555443210                               0122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHP  270 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp  270 (395)
                      +...+..+.+|+.+||..+|.+|||+.+++.+-
T Consensus       258 ~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l  290 (334)
T cd05100         258 PANCTHELYMIMRECWHAVPSQRPTFKQLVEDL  290 (334)
T ss_pred             CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence            345677899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.93  E-value=4.1e-26  Score=208.79  Aligned_cols=158  Identities=22%  Similarity=0.276  Sum_probs=126.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcc--cccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMT--QEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~--~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||++...........+  ....+..|+|||+
T Consensus       102 ~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  181 (268)
T cd05063         102 GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA  181 (268)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHH
Confidence            45778888899999999999999999999999999999999999999999999865432221111  1223457999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++||||+||++|+|++ |..||...+.......|......                               
T Consensus       182 ~~~~~-~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~-------------------------------  229 (268)
T cd05063         182 IAYRK-FTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRL-------------------------------  229 (268)
T ss_pred             hhcCC-cChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCC-------------------------------
Confidence            98765 8999999999999999997 99999887766655555432111                               


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...+..+.+|+.+||..+|..||++.++++
T Consensus       230 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         230 PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            112345678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.93  E-value=4.8e-26  Score=208.15  Aligned_cols=159  Identities=20%  Similarity=0.249  Sum_probs=124.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~aPE~~~  179 (267)
T cd08228         101 RLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERIH  179 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-HHHhcCCCCccccChhhhc
Confidence            456778888999999999999999999999999999999999999999999988654321 1223456888999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|+||+||++|+|++|..||..... ...+.......+.++                             ..
T Consensus       180 ~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~  229 (267)
T cd08228         180 ENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP-----------------------------LP  229 (267)
T ss_pred             cCC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC-----------------------------CC
Confidence            765 88999999999999999999999865432 111211111111111                             01


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ....+..+.+||.+||..+|++|||+.++++
T Consensus       230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             hhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence            1245678999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.93  E-value=8.6e-26  Score=205.04  Aligned_cols=156  Identities=19%  Similarity=0.192  Sum_probs=125.9

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      +++..+..++.|++.|++|||+.|++|+||+|+||+++.++.++|+|||++...............++..|+|||.+.+.
T Consensus       100 ~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  179 (258)
T smart00219      100 LSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDG  179 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccC
Confidence            88889999999999999999999999999999999999999999999999986543211111122367889999998665


Q ss_pred             CCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         161 RHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       161 ~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      . ++.++||||+||++|+|++ |.+||.+.+....+..+....                               ....+.
T Consensus       180 ~-~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~~~  227 (258)
T smart00219      180 K-FTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-------------------------------RLPKPE  227 (258)
T ss_pred             C-CCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-------------------------------CCCCCC
Confidence            4 8999999999999999998 889998866655555443211                               012233


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+..+.+++.+||..||++|||+.++++
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      228 NCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             cCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            46788999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.93  E-value=5.4e-26  Score=206.40  Aligned_cols=153  Identities=18%  Similarity=0.191  Sum_probs=122.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||..|++||||+|+||+++.++.++|+|||++.....    .......+..|+|||++.+
T Consensus        96 ~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~~y~~pe~~~~  171 (254)
T cd05083          96 LVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSM----GVDNSKLPVKWTAPEALKH  171 (254)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccc----cCCCCCCCceecCHHHhcc
Confidence            456777788999999999999999999999999999999999999999999976432    1222344567999999877


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++..+|+||+||++|+|++ |.+||.+.+.......+....                               ....+
T Consensus       172 ~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~~  219 (254)
T cd05083         172 KK-FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY-------------------------------RMEPP  219 (254)
T ss_pred             CC-cCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC-------------------------------CCCCC
Confidence            65 8999999999999999997 999998876554443332110                               01122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+..+.+|+.+||..+|..|||+.+++.
T Consensus       220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         220 EGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             CcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.93  E-value=5.6e-26  Score=211.93  Aligned_cols=158  Identities=18%  Similarity=0.154  Sum_probs=123.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||+++........ ......++..|+|||++.
T Consensus       105 ~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (303)
T cd05110         105 NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH  184 (303)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhc
Confidence            5677778889999999999999999999999999999999999999999999865432111 122334577899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.........+.. ..                              ....
T Consensus       185 ~~~-~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~------------------------------~~~~  232 (303)
T cd05110         185 YRK-FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK-GE------------------------------RLPQ  232 (303)
T ss_pred             cCC-CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-CC------------------------------CCCC
Confidence            765 8999999999999999997 8899987654333222211 00                              0112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+++..||..+|++|||+.+++..
T Consensus       233 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         233 PPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            24456789999999999999999999998874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.92  E-value=5.2e-26  Score=208.61  Aligned_cols=158  Identities=13%  Similarity=0.138  Sum_probs=125.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.||+.|+.|||+.||+||||||+||+++.++.++|+|||+++....... .......++..|++||.+.
T Consensus       109 ~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  188 (273)
T cd05074         109 TLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLA  188 (273)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHh
Confidence            466777888999999999999999999999999999999999999999999986532211 1122334567899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |.+||.+.+.......+....                               ....
T Consensus       189 ~~~-~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  236 (273)
T cd05074         189 DNV-YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-------------------------------RLKQ  236 (273)
T ss_pred             cCc-cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-------------------------------cCCC
Confidence            765 8899999999999999998 899998776655444443210                               0112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+++.+||..+|+.|||+.+++.+
T Consensus       237 ~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         237 PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            24566789999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.92  E-value=7.5e-26  Score=210.31  Aligned_cols=164  Identities=16%  Similarity=0.204  Sum_probs=122.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.|++.|+.|||+.|++|+||||+|||++.++.++|+|||++........ .......++..|+|||++.
T Consensus       126 ~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  205 (296)
T cd05095         126 TISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL  205 (296)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHh
Confidence            355667888999999999999999999999999999999999999999999986532211 1122234467899999988


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc--CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG--RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~--g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.. ++.++|||||||++|||++  |..||...+..+.+..+.....        .                ........
T Consensus       206 ~~~-~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~--------~----------------~~~~~~~~  260 (296)
T cd05095         206 LGK-FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFR--------D----------------QGRQVYLP  260 (296)
T ss_pred             cCC-ccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHh--------h----------------ccccccCC
Confidence            765 8999999999999999997  7788877665444332211000        0                00000112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...++.+.+|+..||..||.+|||+.++++
T Consensus       261 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         261 KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            23456688999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.92  E-value=5.2e-26  Score=207.90  Aligned_cols=159  Identities=21%  Similarity=0.229  Sum_probs=123.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... ......+++..|+|||++
T Consensus       100 ~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~ape~~  178 (267)
T cd08229         100 KRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERI  178 (267)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-cccccccCCcCccCHHHh
Confidence            3457888888999999999999999999999999999999999999999999988654321 222345788999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH--hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV--QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~--~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+.. ++.++|+||+||++|+|++|..||.+....  .....+... ..+                             .
T Consensus       179 ~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~-----------------------------~  227 (267)
T cd08229         179 HENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYP-----------------------------P  227 (267)
T ss_pred             cCCC-ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-CCC-----------------------------C
Confidence            8765 789999999999999999999999765321  111111110 000                             0


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...+..+.+||.+||..||.+|||+.++++
T Consensus       228 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         228 LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence            011346778999999999999999999997764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.92  E-value=9.3e-26  Score=207.24  Aligned_cols=159  Identities=14%  Similarity=0.191  Sum_probs=126.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...............++..|+|||.+.+
T Consensus       113 ~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  192 (275)
T cd05046         113 PLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE  192 (275)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhcc
Confidence            57888899999999999999999999999999999999999999999999987543222222334466778999999887


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |..||.+......+..+...  .                            .....+
T Consensus       193 ~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~--~----------------------------~~~~~~  241 (275)
T cd05046         193 DD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG--K----------------------------LELPVP  241 (275)
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC--C----------------------------cCCCCC
Confidence            65 7899999999999999998 88899766554444433210  0                            001123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+..+.+++.+||..+|.+|||+.+++.+
T Consensus       242 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         242 EGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            4567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=8e-26  Score=210.03  Aligned_cols=163  Identities=16%  Similarity=0.192  Sum_probs=123.3

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~~  159 (395)
                      +++..+..++.|++.|+.|||+.|++|+||||+||+++.++.+||+|||++........ .......++..|+|||++.+
T Consensus       126 ~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  205 (295)
T cd05097         126 VSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL  205 (295)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc
Confidence            45566677899999999999999999999999999999999999999999976432211 11223345678999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHc--CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG--RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~--g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .. ++.++|||||||++|+|++  |..||...+....+..+........                        .......
T Consensus       206 ~~-~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~  260 (295)
T cd05097         206 GK-FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQG------------------------RQIYLSQ  260 (295)
T ss_pred             CC-cCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhcc------------------------ccccCCC
Confidence            65 8999999999999999987  6778887665554444332110000                        0001122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ++..++.+.+|+.+||..||.+|||+.++++
T Consensus       261 ~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         261 TPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            3456789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.92  E-value=8.9e-26  Score=214.28  Aligned_cols=160  Identities=18%  Similarity=0.222  Sum_probs=123.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..++...+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++........ .......++..|+|||++
T Consensus       174 ~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  253 (343)
T cd05103         174 KVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  253 (343)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHh
Confidence            4577788888999999999999999999999999999999999999999999986532211 111223456679999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+......+...... +                             ....
T Consensus       254 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~-----------------------------~~~~  302 (343)
T cd05103         254 FDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-G-----------------------------TRMR  302 (343)
T ss_pred             cCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhc-c-----------------------------CCCC
Confidence            8765 8999999999999999996 99999765433222221110 0                             0011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...++.+.+++..||..||.+|||+.++++|
T Consensus       303 ~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         303 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            223456789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.92  E-value=7.8e-26  Score=207.13  Aligned_cols=161  Identities=16%  Similarity=0.136  Sum_probs=119.6

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~~  159 (395)
                      +++..+..++.||+.|+.|||+.||+||||||+|||++.++.+||+|||++........ .......++..|+|||++..
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05042          97 AQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEI  176 (269)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhh
Confidence            34566778999999999999999999999999999999999999999999875432111 11122345677999999743


Q ss_pred             ------CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         160 ------ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       160 ------~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                            ...++.++||||+||++|+|++ |.+||......+.+..+........                          
T Consensus       177 ~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------------------------  230 (269)
T cd05042         177 RGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKL--------------------------  230 (269)
T ss_pred             ccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccC--------------------------
Confidence                  1236889999999999999998 7889987766665555432111100                          


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .........+..+.+++..|+ .||++|||+.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         231 PKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             CCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            001223456778888988888 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.92  E-value=1.2e-25  Score=205.73  Aligned_cols=158  Identities=17%  Similarity=0.186  Sum_probs=124.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-----CeEEeeCCcccccCCCCC-CCccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-----SSKICDFGLARVEEPDPN-KAMTQEVVTQYYR  152 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-----~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~  152 (395)
                      ..++...+..++.|++.|+.|||+.+++|+||+|+||+++.++     .++|+|||++........ .......++..|+
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~  180 (269)
T cd05044         101 PLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWM  180 (269)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCcccc
Confidence            4467778888999999999999999999999999999999877     899999999976432111 1112234567899


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      |||++.+.. ++.++|||||||++|+|++ |..||...+....+..+...                              
T Consensus       181 aPE~~~~~~-~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~------------------------------  229 (269)
T cd05044         181 APESLLDGK-FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG------------------------------  229 (269)
T ss_pred             CHHHHccCC-cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC------------------------------
Confidence            999998765 8999999999999999997 99999877665544443210                              


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                       .....+...+..+.+||.+||..+|.+|||+.++++
T Consensus       230 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         230 -GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             -CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence             011233456778999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=9.6e-26  Score=204.94  Aligned_cols=153  Identities=16%  Similarity=0.211  Sum_probs=124.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||+++.....    ......+..|+|||++.+
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~----~~~~~~~~~~~ape~~~~  173 (256)
T cd05039          98 VITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG----QDSGKLPVKWTAPEALRE  173 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc----cccCCCcccccCchhhcC
Confidence            5788888999999999999999999999999999999999999999999999875321    122344567999999877


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++||||+||++|+|++ |..||...+..+....+....                               ....+
T Consensus       174 ~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~~  221 (256)
T cd05039         174 KK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-------------------------------RMEAP  221 (256)
T ss_pred             Cc-CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-------------------------------CCCCc
Confidence            65 8899999999999999997 999998776554433332100                               01223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...++.+.+||.+||..+|++|||+.+++.
T Consensus       222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         222 EGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             cCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            456788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.92  E-value=9.3e-26  Score=207.40  Aligned_cols=153  Identities=18%  Similarity=0.210  Sum_probs=119.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-------CeEEeeCCcccccCCCCCCCcccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-------SSKICDFGLARVEEPDPNKAMTQEVVTQYY  151 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-------~vKl~DFGla~~~~~~~~~~~~~~~~t~~y  151 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++..+       .++|+|||++.....     .....++..|
T Consensus       112 ~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~-----~~~~~~~~~~  186 (274)
T cd05076         112 GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS-----REERVERIPW  186 (274)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc-----ccccccCCcc
Confidence            4567777888999999999999999999999999999997543       389999999865321     2234677889


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS  230 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (395)
                      +|||++.+...++.++|||||||++|||+ +|.+||.+.........+..                              
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~------------------------------  236 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK------------------------------  236 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh------------------------------
Confidence            99999876555899999999999999985 79999987654332221110                              


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                         ....+...++.+.+||.+||..+|++|||+.++|++
T Consensus       237 ---~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         237 ---KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ---ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence               011223345678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.92  E-value=1.1e-25  Score=217.27  Aligned_cols=159  Identities=20%  Similarity=0.195  Sum_probs=123.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.|+.|||..||+||||||+|||++.++.+||+|||+++....... .......++..|+|||++
T Consensus       232 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  311 (400)
T cd05105         232 EGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI  311 (400)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhh
Confidence            4577788889999999999999999999999999999999999999999999986532211 112233567789999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+......+...... +                             ....
T Consensus       312 ~~~~-~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~-~-----------------------------~~~~  360 (400)
T cd05105         312 FDNL-YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS-G-----------------------------YRMA  360 (400)
T ss_pred             cCCC-CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhc-C-----------------------------CCCC
Confidence            8765 8999999999999999996 88998765433222221110 0                             0011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+|+.+||..||++|||+.++.+
T Consensus       361 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         361 KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            23456788999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.92  E-value=1.2e-25  Score=205.61  Aligned_cols=158  Identities=20%  Similarity=0.262  Sum_probs=126.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCc--ccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAM--TQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~--~~~~~t~~y~aPEv  156 (395)
                      ..++...+..++.|++.|+.|||+.|++||||+|+|||++.++.++|+|||++...........  ....++..|+|||+
T Consensus       101 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~  180 (267)
T cd05066         101 GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA  180 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhH
Confidence            4577888889999999999999999999999999999999999999999999987543222111  12233567999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|+|||||++|+|++ |..||.+.+..+.+..+.+...                               .
T Consensus       181 ~~~~~-~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~  228 (267)
T cd05066         181 IAYRK-FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-------------------------------L  228 (267)
T ss_pred             hccCc-cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc-------------------------------C
Confidence            98765 8999999999999999886 9999987766555554432211                               1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+|+.+||..+|..|||+.++++
T Consensus       229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         229 PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            122446778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.92  E-value=1.3e-25  Score=207.22  Aligned_cols=172  Identities=19%  Similarity=0.166  Sum_probs=123.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.|+.|||+.||+||||||+||+++.++.++|+|||++.........  ......++..|+|||+
T Consensus       102 ~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  181 (283)
T cd05080         102 HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVEC  181 (283)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhH
Confidence            35888999999999999999999999999999999999999999999999999865432111  1122345667999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHH-hcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITD-LLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|+|++|..||......  +..+.. ..+......+..        ...   .    ....
T Consensus       182 ~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~---~----~~~~  243 (283)
T cd05080         182 LKENK-FSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIE--------LLE---R----GMRL  243 (283)
T ss_pred             hcccC-CCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhh--------hhh---c----CCCC
Confidence            87765 899999999999999999999988654321  111110 000000000000        000   0    0001


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...+..+.+|+.+||..||+.|||+.+++.
T Consensus       244 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         244 PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            223456789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.92  E-value=1.4e-25  Score=229.56  Aligned_cols=158  Identities=20%  Similarity=0.175  Sum_probs=119.8

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-----------------CCCcc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-----------------NKAMT  143 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-----------------~~~~~  143 (395)
                      ++...+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||+|+......                 .....
T Consensus       110 lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g  189 (932)
T PRK13184        110 TSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPG  189 (932)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCC
Confidence            3444566789999999999999999999999999999999999999999998652100                 01112


Q ss_pred             cccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh
Q psy2865         144 QEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR  223 (395)
Q Consensus       144 ~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  223 (395)
                      ..+||+.|+|||++.+.. ++.++||||+||++|+|++|.+||.+.........  ..+..|.                 
T Consensus       190 ~~vGT~~YmAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~--~~i~~P~-----------------  249 (932)
T PRK13184        190 KIVGTPDYMAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR--DVILSPI-----------------  249 (932)
T ss_pred             CCCCCCCCCCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh--hhccChh-----------------
Confidence            357999999999998876 89999999999999999999999987543322111  1111000                 


Q ss_pred             ccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                                ........++.+.+++.+||..||.+|++..++|.
T Consensus       250 ----------~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        250 ----------EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             ----------hccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                      00112356788999999999999999988766554

>KOG1151|consensus

Probab=99.92  E-value=1.1e-25  Score=205.91  Aligned_cols=171  Identities=24%  Similarity=0.290  Sum_probs=136.4

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCcccc--CccccCCCCCceeec---CCCCeEEeeCCcccccCCCCC------CCccc
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTID--GYQARQPTRQLVMYQ---ATYSSKICDFGLARVEEPDPN------KAMTQ  144 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~iiHrDlkp~Nil~~---~~~~vKl~DFGla~~~~~~~~------~~~~~  144 (395)
                      .+.+.++|..++.++-||+.||.||...  .|||-||||.|||+-   ..|.+||+|||++.++.++..      ...+.
T Consensus       560 KQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQ  639 (775)
T KOG1151|consen  560 KQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQ  639 (775)
T ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecc
Confidence            4567889999999999999999999965  799999999999994   467899999999998876432      33456


Q ss_pred             ccccccccchhhhhcC---CCCCccchHHhHHHHHHHHHcCCCCCCCCCh-HhHHH--HHHHhcCCCCHHHHHhhhhhhh
Q psy2865         145 EVVTQYYRAPEILMGA---RHYSAAVDVWSVGCIFAELLGRRILFQAQSP-VQQLG--LITDLLGTPTPEEMRHACDGAK  218 (395)
Q Consensus       145 ~~~t~~y~aPEvl~~~---~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~--~i~~~~g~~~~~~~~~~~~~~~  218 (395)
                      ..||.||.+||.+.-.   +..+.++||||+|||+|..+.|+-||...-. .++|.  .|+..                 
T Consensus       640 gAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA-----------------  702 (775)
T KOG1151|consen  640 GAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA-----------------  702 (775)
T ss_pred             cCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc-----------------
Confidence            7899999999988533   4478999999999999999999999965432 22222  22211                 


Q ss_pred             hhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         219 CHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                                  .+.-+..-+.++.++.+||++||.+.-++|+.+.++-.||||..+
T Consensus       703 ------------tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  703 ------------TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             ------------eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence                        011123345688999999999999999999999999999999754

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=1.5e-25  Score=206.92  Aligned_cols=174  Identities=20%  Similarity=0.255  Sum_probs=123.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||+++.......  .......++..|+|||+
T Consensus       104 ~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~  183 (284)
T cd05079         104 NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC  183 (284)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHH
Confidence            3577888889999999999999999999999999999999999999999999986543211  11223456778999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|||||||++|+|+++..++....     .......+....+.....    ........       ....
T Consensus       184 ~~~~~-~~~~~Di~slG~il~ellt~~~~~~~~~-----~~~~~~~~~~~~~~~~~~----~~~~~~~~-------~~~~  246 (284)
T cd05079         184 LIQSK-FYIASDVWSFGVTLYELLTYCDSESSPM-----TLFLKMIGPTHGQMTVTR----LVRVLEEG-------KRLP  246 (284)
T ss_pred             hccCC-CCccccchhhhhhhhhhhcCCCCCcccc-----chhhhhcccccccccHHH----HHHHHHcC-------ccCC
Confidence            98765 8999999999999999999876543211     111112221111100000    00000000       0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.+||.+||..||.+|||+.+++.+
T Consensus       247 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         247 RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            334578899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.92  E-value=1.7e-25  Score=204.84  Aligned_cols=158  Identities=18%  Similarity=0.237  Sum_probs=124.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Cccccc---ccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEV---VTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~---~t~~y~aP  154 (395)
                      ..++...+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++......... ......   .+..|+||
T Consensus       101 ~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (269)
T cd05065         101 GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAP  180 (269)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCH
Confidence            45777888899999999999999999999999999999999999999999998765432111 111111   24579999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      |++.+.. ++.++||||+||++|||++ |..||.+.+.......+.....                              
T Consensus       181 E~~~~~~-~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~------------------------------  229 (269)
T cd05065         181 EAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR------------------------------  229 (269)
T ss_pred             hHhccCc-ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc------------------------------
Confidence            9998765 8999999999999999886 9999987776555554432111                              


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                       ...+...+..+.+++.+||..+|.+|||+.+++.
T Consensus       230 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         230 -LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             -CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             1122456778999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.4e-25  Score=205.04  Aligned_cols=158  Identities=19%  Similarity=0.178  Sum_probs=125.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC-cccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA-MTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~-~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.|+.|||+.|++||||+|+||+++.++.++|+|||+++......... .....++..|+|||.+
T Consensus       104 ~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  183 (279)
T cd05057         104 DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESI  183 (279)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHh
Confidence            347888889999999999999999999999999999999999999999999998754321111 1112235679999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|+||+||++|+|++ |..||.+....+....+....                               ...
T Consensus       184 ~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  231 (279)
T cd05057         184 LHRI-YTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-------------------------------RLP  231 (279)
T ss_pred             hcCC-cCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-------------------------------CCC
Confidence            7665 8999999999999999998 999998876655444433210                               112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+++.+||..||..|||+.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         232 QPPICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            23446678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.92  E-value=3.1e-25  Score=203.15  Aligned_cols=161  Identities=14%  Similarity=0.136  Sum_probs=118.7

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      ++...+..++.||+.||.|||+.+++||||||+|||++.++.++|+|||++....... .......+++..|+|||++.+
T Consensus        96 ~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (268)
T cd05086          96 SQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGE  175 (268)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhccc
Confidence            4455567789999999999999999999999999999999999999999986432111 112234567889999998743


Q ss_pred             C------CCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         160 A------RHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       160 ~------~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      .      ..++.++|||||||++|||++ |.+||...+..+.+..+..--...                         + 
T Consensus       176 ~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~-------------------------~-  229 (268)
T cd05086         176 FHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK-------------------------L-  229 (268)
T ss_pred             ccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc-------------------------c-
Confidence            1      125778999999999999995 677888777665555543210000                         0 


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ....+....++.+.+++..|| .+|.+|||+.++++
T Consensus       230 ~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         230 FKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            001223346778899999999 68999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.92  E-value=2.8e-25  Score=202.88  Aligned_cols=157  Identities=22%  Similarity=0.249  Sum_probs=123.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.|+.|||+.||+|+||+|+||+++.++.++|+|||++...... ........++..|+|||++.
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~y~apE~~~  179 (267)
T cd08224         101 RLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-TTAAHSLVGTPYYMSPERIH  179 (267)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC-CcccceecCCccccCHHHhc
Confidence            45677888899999999999999999999999999999999999999999998865322 11223457888999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh--HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSP--VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~--~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.. ++.++|+||+||++|+|++|..||.+...  ......+....                               ...
T Consensus       180 ~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------~~~  227 (267)
T cd08224         180 ENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD-------------------------------YPP  227 (267)
T ss_pred             cCC-CCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC-------------------------------CCC
Confidence            765 89999999999999999999999965431  11111111100                               001


Q ss_pred             cC-CCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LS-SQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~-~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+ ...+..+.++|.+||..+|+.|||+.++++
T Consensus       228 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         228 LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            11 245678999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=4e-25  Score=202.38  Aligned_cols=159  Identities=19%  Similarity=0.270  Sum_probs=127.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.|++.|+.|||+ .|++|+||+|.||+++.++.++|+|||++.......  ......++..|+|||+
T Consensus       107 ~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~  184 (269)
T cd08528         107 KQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES--KLTSVVGTILYSCPEI  184 (269)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc--ccccccCcccCcChhh
Confidence            3457888888999999999999996 789999999999999999999999999998654321  3445678899999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++..+|+|||||++|+|++|.+||...+.......+......+.                              
T Consensus       185 ~~~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------  233 (269)
T cd08528         185 VKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL------------------------------  233 (269)
T ss_pred             hcCCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC------------------------------
Confidence            98765 89999999999999999999999987665544444332111000                              


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .....++.+.+||.+||..||++|||+.++..+
T Consensus       234 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         234 PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            112456789999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=3e-25  Score=201.79  Aligned_cols=151  Identities=19%  Similarity=0.150  Sum_probs=117.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-------CeEEeeCCcccccCCCCCCCccccccccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-------SSKICDFGLARVEEPDPNKAMTQEVVTQYYR  152 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-------~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~  152 (395)
                      .++...+..++.||+.||.|||..||+||||||+||+++.++       .++|+|||++.....     .....++..|+
T Consensus        97 ~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~y~  171 (259)
T cd05037          97 NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-----REERVERIPWI  171 (259)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-----ccccccCCCcc
Confidence            577778888999999999999999999999999999999877       799999999986432     22345677899


Q ss_pred             chhhhhcC-CCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc
Q psy2865         153 APEILMGA-RHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS  230 (395)
Q Consensus       153 aPEvl~~~-~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (395)
                      |||++.+. ..++.++||||+||++|+|++ |..||...+..........                              
T Consensus       172 aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~------------------------------  221 (259)
T cd05037         172 APECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD------------------------------  221 (259)
T ss_pred             ChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc------------------------------
Confidence            99998775 348999999999999999998 5777766543222111110                              


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                         ....+......+.+||.+||..+|.+|||+.++++
T Consensus       222 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         222 ---QHRLPMPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             ---CCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence               00111222378899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.92  E-value=4.7e-25  Score=202.00  Aligned_cols=161  Identities=17%  Similarity=0.145  Sum_probs=118.0

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .++..+..++.|++.|+.|||+.|++||||||+||+++.++.++|+|||+++....... .......++..|+|||++.+
T Consensus        97 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05087          97 PDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDE  176 (269)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhcc
Confidence            44556677899999999999999999999999999999999999999999975432211 11223456788999999864


Q ss_pred             CC------CCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         160 AR------HYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       160 ~~------~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ..      .++.++|||||||++|+|++ |..||......+.+..........                         . 
T Consensus       177 ~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~-  230 (269)
T cd05087         177 VHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLK-------------------------L-  230 (269)
T ss_pred             ccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCC-------------------------C-
Confidence            21      25789999999999999996 999998766554433322110000                         0 


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .........+..+.+++..|+ .+|++|||+++++.
T Consensus       231 ~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         231 PKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             CCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            000112345677899999998 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.91  E-value=7.5e-25  Score=211.33  Aligned_cols=159  Identities=18%  Similarity=0.150  Sum_probs=123.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.||+.||.|||+.|++||||||+|||++.++.++|+|||+++....... ......+++..|+|||++.
T Consensus       235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  314 (401)
T cd05107         235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF  314 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc
Confidence            455666777889999999999999999999999999999999999999999986432111 1122335678899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|||++ |..||......+.+...... |.                             ....
T Consensus       315 ~~~-~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~-~~-----------------------------~~~~  363 (401)
T cd05107         315 NNL-YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKR-GY-----------------------------RMAK  363 (401)
T ss_pred             CCC-CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHc-CC-----------------------------CCCC
Confidence            765 8999999999999999997 88999776544443332210 00                             0112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+||.+||..+|..||++.+++..
T Consensus       364 p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         364 PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            34567899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.91  E-value=6e-25  Score=202.90  Aligned_cols=172  Identities=20%  Similarity=0.283  Sum_probs=120.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.|++.||.|||..||+||||||+||+++.++.++|+|||+++........  ......++..|+|||+
T Consensus       103 ~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  182 (284)
T cd05081         103 ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPES  182 (284)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHH
Confidence            35788888899999999999999999999999999999999999999999999865432111  1112233456999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCH--HHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTP--EEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +.+.. ++.++|||||||++|||++|..++..... ..+.    .++....  ........     ....       ...
T Consensus       183 ~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~-----~~~~-------~~~  244 (284)
T cd05081         183 LTESK-FSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMR----MMGNDKQGQMIVYHLIE-----LLKN-------NGR  244 (284)
T ss_pred             hccCC-cChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhh----hcccccccccchHHHHH-----HHhc-------CCc
Confidence            98765 89999999999999999998776543321 1111    1111100  00000000     0000       001


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+...+..+.+||.+||..+|+.|||+.+++.
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         245 LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            1233456788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.91  E-value=1.1e-24  Score=195.34  Aligned_cols=160  Identities=30%  Similarity=0.420  Sum_probs=127.5

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      ++...+..++.+++.++.+||..|++|+||+|.||+++.++.++|+|||++......  .......++..|++||++.+.
T Consensus        84 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~~~~~~pE~~~~~  161 (244)
T smart00220       84 LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG--GLLTTFVGTPEYMAPEVLLGK  161 (244)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccc--cccccccCCcCCCCHHHHccC
Confidence            677778889999999999999999999999999999999999999999999875432  134456788899999999866


Q ss_pred             CCCCccchHHhHHHHHHHHHcCCCCCCCCChHh-HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         161 RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ-QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       161 ~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      . ++.++||||+|+++++|++|..||....... .+..+......                             ......
T Consensus       162 ~-~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  211 (244)
T smart00220      162 G-YGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP-----------------------------FPPPEW  211 (244)
T ss_pred             C-CCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC-----------------------------Cccccc
Confidence            5 7889999999999999999999997733322 22222110000                             000011


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                      ..+..+.+++.+||..+|++||++.++++||||
T Consensus       212 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      212 KISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             cCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            166789999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.91  E-value=3.8e-25  Score=201.62  Aligned_cols=159  Identities=19%  Similarity=0.254  Sum_probs=124.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...++......++.||+.||.|||+.+++|++|++.||+++.++.+||+|||++........ ...........|+|||+
T Consensus        97 ~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~  176 (259)
T PF07714_consen   97 KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEV  176 (259)
T ss_dssp             TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            35677788888999999999999999999999999999999999999999999987522111 12233456778999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++||||||+++|||++ |..||...+..+....+.+..                               ..
T Consensus       177 ~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~-------------------------------~~  224 (259)
T PF07714_consen  177 LKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ-------------------------------RL  224 (259)
T ss_dssp             HHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE-------------------------------ET
T ss_pred             ccccc-ccccccccccccccccccccccccccccccccccccccccc-------------------------------cc
Confidence            98876 8999999999999999999 789998877666555553211                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...+..+.++|..||..||.+|||+.++++
T Consensus       225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  225 PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             eeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            234567888999999999999999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0984|consensus

Probab=99.91  E-value=3.9e-25  Score=183.64  Aligned_cols=128  Identities=20%  Similarity=0.243  Sum_probs=108.2

Q ss_pred             HHHHHHHHhhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccc
Q psy2865          71 RRRKKEREKKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ  149 (395)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~  149 (395)
                      .++.-.++...+|...-.++-.++.||.|||+. .+||||+||+|||||..|.|||||||.+-.+.+...  .+-..|..
T Consensus       135 y~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA--kt~daGCk  212 (282)
T KOG0984|consen  135 YRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA--KTMDAGCK  212 (282)
T ss_pred             HHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhH--HHHhcCCC
Confidence            355667888999999999999999999999976 899999999999999999999999999987653321  23356778


Q ss_pred             cccchhhhhc---CCCCCccchHHhHHHHHHHHHcCCCCCCC-CChHhHHHHHHH
Q psy2865         150 YYRAPEILMG---ARHYSAAVDVWSVGCIFAELLGRRILFQA-QSPVQQLGLITD  200 (395)
Q Consensus       150 ~y~aPEvl~~---~~~~~~~~DiWSlG~il~ell~g~~~f~~-~~~~~~l~~i~~  200 (395)
                      .|||||.+..   ...|+.++||||||++++||++++.||.. .++.+||..+++
T Consensus       213 pYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  213 PYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             ccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            8999999853   22499999999999999999999999975 477888888765

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.90  E-value=3.4e-24  Score=197.55  Aligned_cols=171  Identities=20%  Similarity=0.249  Sum_probs=121.4

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPEvl  157 (395)
                      .+++..+..++.|++.||.|||..|++|+||+|+||+++.++.++|+|||++.........  ......++..|+|||.+
T Consensus       105 ~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~  184 (284)
T cd05038         105 QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECL  184 (284)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHH
Confidence            5788888999999999999999999999999999999999999999999999875422111  11122445679999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHH-HHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPE-EMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++++|++|..||.......     ....|..... ......     ..+.   ..    ....
T Consensus       185 ~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~-----~~~~---~~----~~~~  246 (284)
T cd05038         185 RTSK-FSSASDVWSFGVTLYELFTYGDPSQSPPAEF-----LRMIGIAQGQMIVTRLL-----ELLK---EG----ERLP  246 (284)
T ss_pred             ccCC-CCcccchHHHhhhhheeeccCCCcccccchh-----ccccccccccccHHHHH-----HHHH---cC----CcCC
Confidence            8765 8999999999999999999998886543211     1111110000 000000     0000   00    0011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+|+.+||..+|..|||+.+++.
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         247 RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            22345678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0587|consensus

Probab=99.90  E-value=1e-24  Score=214.26  Aligned_cols=168  Identities=21%  Similarity=0.281  Sum_probs=138.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      +.++.|..++.+++.++.|+.+||...++|||||-.|||++.++.|||+|||.+..++.+.. ...+.+||++||||||+
T Consensus       117 g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~g-rRnT~iGtP~WMAPEVi  195 (953)
T KOG0587|consen  117 GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVG-RRNTFIGTPYWMAPEVI  195 (953)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccc-cccCcCCCcccccceee
Confidence            77888999999999999999999999999999999999999999999999999998766443 34556999999999999


Q ss_pred             hcCC----CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MGAR----HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~~~----~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ....    .|+..+|+||||++..||.-|.|||-..-+...|-.|.   ..|++.                         
T Consensus       196 ac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip---RNPPPk-------------------------  247 (953)
T KOG0587|consen  196 ACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP---RNPPPK-------------------------  247 (953)
T ss_pred             ecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC---CCCCcc-------------------------
Confidence            6533    27889999999999999999999997665554444331   222221                         


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                       ...+..-+..|.|||..||..|-.+||+..++|.|||+..+
T Consensus       248 -Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  248 -LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             -ccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence             11234456789999999999999999999999999999754

>KOG1026|consensus

Probab=99.89  E-value=8.1e-24  Score=208.54  Aligned_cols=156  Identities=19%  Similarity=0.248  Sum_probs=132.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCC-CCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEP-DPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~-~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..|+..+...++.||+.|+.||-++.+|||||-..|+||+++..|||+|||+++-.-. +.........-...||+||.|
T Consensus       598 ~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsI  677 (774)
T KOG1026|consen  598 PPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESI  677 (774)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHh
Confidence            3477788899999999999999999999999999999999999999999999985322 222222233446689999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +-.. |++.+||||+||+|||++ .|.-|+.|.++.+.+..|.+.                               .+..
T Consensus       678 ly~k-FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g-------------------------------~lL~  725 (774)
T KOG1026|consen  678 LYGK-FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG-------------------------------QLLS  725 (774)
T ss_pred             hcCc-ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC-------------------------------Cccc
Confidence            8876 999999999999999999 689999999999998888641                               2345


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHH
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSA  266 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~  266 (395)
                      -+.+++..+.+|+..||+.+|.+|||+.|+
T Consensus       726 ~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  726 CPENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             CCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            667899999999999999999999999987

>KOG4250|consensus

Probab=99.88  E-value=4.7e-24  Score=205.78  Aligned_cols=114  Identities=25%  Similarity=0.280  Sum_probs=100.2

Q ss_pred             HHHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC--CCC--eEEeeCCcccccCCCCCCCcccccccc
Q psy2865          74 KKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA--TYS--SKICDFGLARVEEPDPNKAMTQEVVTQ  149 (395)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~--~~~--vKl~DFGla~~~~~~~~~~~~~~~~t~  149 (395)
                      +-+.-..|+|.....++.++..||.|||.+|||||||||.||++..  +|.  -||+|||.|+.+.+  +..+++.+||+
T Consensus       110 ~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d--~s~~~S~vGT~  187 (732)
T KOG4250|consen  110 SPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDD--NSLFTSLVGTE  187 (732)
T ss_pred             CcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCC--CCeeeeecCch
Confidence            3455677899999999999999999999999999999999999953  333  69999999998764  45789999999


Q ss_pred             cccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC
Q psy2865         150 YYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ  189 (395)
Q Consensus       150 ~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~  189 (395)
                      .|.+||++.....|+..+|.|||||++|+.+||..||-..
T Consensus       188 ~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  188 EYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             hhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence            9999999986556999999999999999999999999654

>KOG0196|consensus

Probab=99.88  E-value=7.9e-24  Score=205.49  Aligned_cols=161  Identities=20%  Similarity=0.256  Sum_probs=139.4

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccc--cccccch
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVV--TQYYRAP  154 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~--t~~y~aP  154 (395)
                      ....|+..+.-.+++.|+.|+.||..+|+|||||-..|||+|.+..+|++|||++|.+.++.....++.-|  ...|.||
T Consensus       724 ~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAP  803 (996)
T KOG0196|consen  724 NDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAP  803 (996)
T ss_pred             cCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecCh
Confidence            44679999999999999999999999999999999999999999999999999999876654333332222  4579999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      |.|.... ++.++|+||+|++|||.+ .|..||-..++.+.+.-|.+....|+|                          
T Consensus       804 EAIa~RK-FTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP--------------------------  856 (996)
T KOG0196|consen  804 EAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP--------------------------  856 (996)
T ss_pred             hHhhhcc-cCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC--------------------------
Confidence            9998765 899999999999999977 799999999999999999876666554                          


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                           .+++..+..|+..||+.|-..||++.|++.+
T Consensus       857 -----mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  857 -----MDCPAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             -----CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence                 5678889999999999999999999999863

>KOG4257|consensus

Probab=99.88  E-value=9.5e-24  Score=200.29  Aligned_cols=161  Identities=19%  Similarity=0.245  Sum_probs=135.1

Q ss_pred             HHHHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccc
Q psy2865          74 KKEREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRA  153 (395)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a  153 (395)
                      -|+...+++-.+...|..||..||+|||+...|||||-..|||+.+...|||+|||++|++.++.....+..--..-|||
T Consensus       481 Lq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWma  560 (974)
T KOG4257|consen  481 LQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMA  560 (974)
T ss_pred             HHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecC
Confidence            34556778888889999999999999999999999999999999999999999999999987665544444344567999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ||-+.-.. ++.++|||-|||++||++ .|.-||.|-...+.+..|...                               
T Consensus       561 PESINfRr-FTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG-------------------------------  608 (974)
T KOG4257|consen  561 PESINFRR-FTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG-------------------------------  608 (974)
T ss_pred             ccccchhc-ccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC-------------------------------
Confidence            99987655 899999999999999987 899999998776655544321                               


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHH
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSA  266 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~  266 (395)
                      ...+.|+++++.+..|+.+||.++|.+||++.++
T Consensus       609 eRlP~P~nCPp~LYslmskcWayeP~kRPrftei  642 (974)
T KOG4257|consen  609 ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI  642 (974)
T ss_pred             CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence            2235678999999999999999999999987764

>KOG1095|consensus

Probab=99.88  E-value=6.3e-23  Score=209.17  Aligned_cols=159  Identities=19%  Similarity=0.206  Sum_probs=131.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCccccc-CCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVE-EPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~-~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...++-.+...++.||+.|+.||+.+++|||||-..|+|++....|||+|||+|+-. ..+.........-...|||||.
T Consensus       796 ~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEs  875 (1025)
T KOG1095|consen  796 PSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPES  875 (1025)
T ss_pred             CCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHH
Confidence            566777888899999999999999999999999999999999999999999999932 2222221122233457999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.... ++.++|||||||++||++ .|..||.+.+..+.+..+.+.-                               ..
T Consensus       876 l~d~i-FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-------------------------------RL  923 (1025)
T KOG1095|consen  876 LKDGI-FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-------------------------------RL  923 (1025)
T ss_pred             Hhhcc-cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-------------------------------cc
Confidence            98754 999999999999999999 5899999999888877655421                               22


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+..++..+.++|..||.-+|++||++..++.
T Consensus       924 ~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  924 DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             CCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            345778888999999999999999999999886

>KOG1187|consensus

Probab=99.87  E-value=5.5e-23  Score=194.28  Aligned_cols=170  Identities=18%  Similarity=0.230  Sum_probs=117.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccC---ccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccc-cccccccchh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDG---YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE-VVTQYYRAPE  155 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~-~~t~~y~aPE  155 (395)
                      .+++.....|+.+++.||+|||...   |||||||++|||+|.++..||+|||+|+..... ....... .||..|+|||
T Consensus       170 ~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PE  248 (361)
T KOG1187|consen  170 PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPE  248 (361)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc-ccceeeecCCCCccCChh
Confidence            6788888999999999999999864   999999999999999999999999999764321 2222222 7999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh---HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ---QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~---~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ++.... .+.++||||||+++.||++|+.+........   ........+...            .   ...+..+. +.
T Consensus       249 y~~~g~-lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~------------~---~~eiiD~~-l~  311 (361)
T KOG1187|consen  249 YASTGK-LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG------------K---LREIVDPR-LK  311 (361)
T ss_pred             hhccCC-cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc------------c---hhheeCCC-cc
Confidence            997644 8999999999999999999998776432111   111111111100            0   00000000 00


Q ss_pred             hhhccCC-CCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         233 SLYSLSS-QATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       233 ~~~~~~~-~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      . ..... ..-..+..+...|+..+|..||++.|++.
T Consensus       312 ~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  312 E-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             C-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            0 00000 11223677888999999999999999754

>KOG0590|consensus

Probab=99.87  E-value=3.5e-23  Score=206.73  Aligned_cols=173  Identities=22%  Similarity=0.223  Sum_probs=137.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~t~~y~aPE  155 (395)
                      ..++...+..++.|++.|+.|+|..||.|||+||+|+++..+|.+||+|||.+..+..+..   ......+|+..|+|||
T Consensus       415 ~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE  494 (601)
T KOG0590|consen  415 GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPE  494 (601)
T ss_pred             cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcc
Confidence            4678888999999999999999999999999999999999999999999999987654333   3455678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHH-HHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLG-LITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~-~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+...-...+||||.|+++..|++|+.||.-....+... .+..                        ..........
T Consensus       495 ~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~------------------------~~~~~~~~~~  550 (601)
T KOG0590|consen  495 VLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY------------------------SDQRNIFEGP  550 (601)
T ss_pred             cccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc------------------------ccccccccCh
Confidence            99988744568999999999999999999997554333221 1100                        0011112233


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..+...++...+.+|.+||++||.+|+|++++|+.+||+..
T Consensus       551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            34455667788999999999999999999999999999863

>KOG0194|consensus

Probab=99.86  E-value=6.4e-23  Score=195.66  Aligned_cols=156  Identities=18%  Similarity=0.166  Sum_probs=126.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcc-cccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMT-QEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~-~~~~t~~y~aPEvl~  158 (395)
                      .++..+...++.+++.||+|||+.++|||||-..|+|++.++.+||+|||+++.-.  ...... ..--...|+|||.+.
T Consensus       258 ~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~  335 (474)
T KOG0194|consen  258 SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLN  335 (474)
T ss_pred             CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc--ceeeccccccCcceecChhhhc
Confidence            57788888899999999999999999999999999999999999999999998632  111111 112356799999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .. .|+.++|||||||++||+++ |..||.+....+....|....                              -....
T Consensus       336 ~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~------------------------------~r~~~  384 (474)
T KOG0194|consen  336 TG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNG------------------------------YRMPI  384 (474)
T ss_pred             cC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcC------------------------------ccCCC
Confidence            76 49999999999999999996 889999999888877774311                              01123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+.....++.+|+..||+.|+|+.++.+
T Consensus       385 ~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  385 PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence            3456667788899999999999999998865

>KOG0590|consensus

Probab=99.86  E-value=2.6e-22  Score=200.47  Aligned_cols=168  Identities=20%  Similarity=0.253  Sum_probs=133.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCcc-ccCccccCCCCCceeecCCC-CeEEeeCCcccccCC-CC-CCCcccccc-cccccch
Q psy2865          80 KRSSRRKPFKLSEISATRPDST-IDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEP-DP-NKAMTQEVV-TQYYRAP  154 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH-~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~-~~-~~~~~~~~~-t~~y~aP  154 (395)
                      ..+...+.+++.|+..++.|+| ..++.|||++|+|.+++.++ .++++|||+|..+.. .+ .......+| ++.|+||
T Consensus       119 ~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~  198 (601)
T KOG0590|consen  119 GTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAP  198 (601)
T ss_pred             CCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCc
Confidence            5677888999999999999999 99999999999999999999 999999999987654 22 233445688 9999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |+..+.......+|+||.|+++.-|++|..++......+....     +                     +.... ....
T Consensus       199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~-----~---------------------~~~~~-~~~~  251 (601)
T KOG0590|consen  199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS-----S---------------------WKSNK-GRFT  251 (601)
T ss_pred             ccccchhhcCCCcccccccccccccccCCCCccccccccccce-----e---------------------ecccc-cccc
Confidence            9998855568899999999999999999998865443321000     0                     00000 0011


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+...+....+++.++|..+|..|.+.+++-.+||+..
T Consensus       252 ~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  252 QLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            2344567778899999999999999999999999999987

>KOG0606|consensus

Probab=99.85  E-value=5e-22  Score=199.19  Aligned_cols=156  Identities=21%  Similarity=0.218  Sum_probs=127.5

Q ss_pred             HhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC--C------C------CCcccccccccccchhhh
Q psy2865          92 EISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD--P------N------KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        92 qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~--~------~------~~~~~~~~t~~y~aPEvl  157 (395)
                      +.+.++.|||+.||+|||+||+|+||..-|++|+.|||+...-...  .      .      -.-...|||+.|+||||+
T Consensus       151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence            3467899999999999999999999999999999999998742110  0      0      011234999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +..+ |+..+|+|++|+|+||.+.|..||.|.++.+.+..++......+.                             -
T Consensus       231 lrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE-----------------------------~  280 (1205)
T KOG0606|consen  231 LRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE-----------------------------E  280 (1205)
T ss_pred             hhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc-----------------------------c
Confidence            9887 999999999999999999999999999999988887654332221                             1


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc---CHHHHHcCCccccCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI---SVNSALCHPYLDEGRL  277 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~---ta~e~L~Hp~f~~~~~  277 (395)
                      .....+++.++|.++|+-+|..|.   .+-++.+|+||...++
T Consensus       281 dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw  323 (1205)
T KOG0606|consen  281 DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW  323 (1205)
T ss_pred             CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence            345678999999999999999996   5778899999977544

>KOG4278|consensus

Probab=99.85  E-value=1.2e-21  Score=186.04  Aligned_cols=154  Identities=18%  Similarity=0.211  Sum_probs=125.7

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      ++--...+++.||..|+.||...++|||||-..|+|+..+..|||+||||++.+..+........--..-|.|||-+.-.
T Consensus       362 v~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyN  441 (1157)
T KOG4278|consen  362 VPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN  441 (1157)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCccccccc
Confidence            44556678899999999999999999999999999999999999999999999865543333333335679999988654


Q ss_pred             CCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         161 RHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       161 ~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      . ++.++|||+|||+|||++ .|-.||+|.+....+.++.+..                               ....+.
T Consensus       442 t-FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy-------------------------------RM~~Pe  489 (1157)
T KOG4278|consen  442 T-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY-------------------------------RMDGPE  489 (1157)
T ss_pred             c-cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc-------------------------------cccCCC
Confidence            4 899999999999999998 5889999987666555543211                               123467


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHH
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSA  266 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~  266 (395)
                      .+++....|++.||+|+|.+||+++++
T Consensus       490 GCPpkVYeLMraCW~WsPsDRPsFaei  516 (1157)
T KOG4278|consen  490 GCPPKVYELMRACWNWSPSDRPSFAEI  516 (1157)
T ss_pred             CCCHHHHHHHHHHhcCCcccCccHHHH
Confidence            889999999999999999999998876

>KOG3653|consensus

Probab=99.85  E-value=1.4e-21  Score=180.66  Aligned_cols=176  Identities=21%  Similarity=0.227  Sum_probs=128.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc---------CccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID---------GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVV  147 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~---------~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~  147 (395)
                      ..-+++.....++..++.||+|||..         +|+|||||..|||+-+++++.|+|||||..+..... ......+|
T Consensus       301 ~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVG  380 (534)
T KOG3653|consen  301 ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVG  380 (534)
T ss_pred             hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhh
Confidence            34567778888999999999999974         699999999999999999999999999998764321 22334799


Q ss_pred             cccccchhhhhcCCCCC-----ccchHHhHHHHHHHHHcCCCCCC-CCChHhHHHHHHHhcCCCCHHHHHhhh--hhhhh
Q psy2865         148 TQYYRAPEILMGARHYS-----AAVDVWSVGCIFAELLGRRILFQ-AQSPVQQLGLITDLLGTPTPEEMRHAC--DGAKC  219 (395)
Q Consensus       148 t~~y~aPEvl~~~~~~~-----~~~DiWSlG~il~ell~g~~~f~-~~~~~~~l~~i~~~~g~~~~~~~~~~~--~~~~~  219 (395)
                      |+.|||||++-|.-.+.     ..+||||+|.++|||+++...+. +..+.-++..-.++-..|+-+.+....  ...+.
T Consensus       381 T~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP  460 (534)
T KOG3653|consen  381 TRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRP  460 (534)
T ss_pred             hhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCC
Confidence            99999999998765444     25899999999999998877665 444444555555555566666654431  11111


Q ss_pred             hhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHH
Q psy2865         220 HMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVN  264 (395)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~  264 (395)
                      .+...|..           ......+.+.+..|+..||+.|+||.
T Consensus       461 ~~p~~W~~-----------h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  461 KIPDAWRK-----------HAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             CChhhhhc-----------CccHHHHHHHHHHHcCCchhhhhhhH
Confidence            11111111           12334678999999999999999986

>KOG0199|consensus

Probab=99.84  E-value=1.9e-21  Score=186.90  Aligned_cols=159  Identities=18%  Similarity=0.188  Sum_probs=130.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccc-cccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQE-VVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~-~~t~~y~aPE  155 (395)
                      ...|.-.....|+.||+.|+.||...++|||||-..|||+.....||||||||.|.+..... ..++.. -....|.|||
T Consensus       206 ~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPE  285 (1039)
T KOG0199|consen  206 KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPE  285 (1039)
T ss_pred             ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHh
Confidence            34455556677999999999999999999999999999999999999999999998764211 122222 2234699999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      .|.... ++.++|+|+|||++|||+ .|..||.|....++|.+|-+.                               ..
T Consensus       286 sLrh~k-FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~-------------------------------er  333 (1039)
T KOG0199|consen  286 SLRHRK-FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG-------------------------------ER  333 (1039)
T ss_pred             Hhcccc-ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc-------------------------------cc
Confidence            998876 999999999999999999 588999999999988887421                               23


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+..++.++.+++..||..+|.+|||+..+..
T Consensus       334 LpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             CCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence            3456788999999999999999999999988753

>KOG0200|consensus

Probab=99.84  E-value=2.7e-21  Score=195.37  Aligned_cols=157  Identities=17%  Similarity=0.180  Sum_probs=124.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccc--cccccchhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEIL  157 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~--t~~y~aPEvl  157 (395)
                      .++......++.||+.|+.||++..+|||||-..|||+..+..+||+|||+|+..............+  ...|||||.+
T Consensus       414 ~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl  493 (609)
T KOG0200|consen  414 ALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESL  493 (609)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHh
Confidence            47777788999999999999999999999999999999999999999999999643322222121222  3459999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCC-hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELL-GRRILFQAQS-PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .... |+.++||||||+++||++ .|..||++.. ..+.+..+.+.                               ...
T Consensus       494 ~~~~-ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G-------------------------------~r~  541 (609)
T KOG0200|consen  494 FDRV-FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEG-------------------------------NRM  541 (609)
T ss_pred             ccCc-ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcC-------------------------------CCC
Confidence            8854 999999999999999998 6889998844 33333333211                               122


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..|..++.++.+++..|+..+|++||+..++..
T Consensus       542 ~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  542 EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            456778999999999999999999999998865

>KOG1094|consensus

Probab=99.84  E-value=2.1e-21  Score=183.37  Aligned_cols=158  Identities=15%  Similarity=0.184  Sum_probs=125.3

Q ss_pred             CchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-CCCCcccccccccccchhhhhcCCCCC
Q psy2865          86 KPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-PNKAMTQEVVTQYYRAPEILMGARHYS  164 (395)
Q Consensus        86 ~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-~~~~~~~~~~t~~y~aPEvl~~~~~~~  164 (395)
                      ...++.||+.|++||.+.++|||||.+.|+|++.++.+||+|||++|.+-.. ....-...+-...|||+|.|+... ++
T Consensus       639 ~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgk-Ft  717 (807)
T KOG1094|consen  639 GVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGK-FT  717 (807)
T ss_pred             hHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhcc-cc
Confidence            3448999999999999999999999999999999999999999999954322 223334456678899999988766 99


Q ss_pred             ccchHHhHHHHHHHHH--cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCC
Q psy2865         165 AAVDVWSVGCIFAELL--GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT  242 (395)
Q Consensus       165 ~~~DiWSlG~il~ell--~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (395)
                      +++|+|+||+++||++  +..-||...++.+.......++..++.                        ......|+-++
T Consensus       718 taSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~------------------------~~~l~~P~~cp  773 (807)
T KOG1094|consen  718 TASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGR------------------------QVVLSRPPACP  773 (807)
T ss_pred             chhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCc------------------------ceeccCCCcCc
Confidence            9999999999999986  677888777666555554443332221                        12234566778


Q ss_pred             HHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         243 GEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       243 ~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+..||.+|+..+-.+|||++++-.
T Consensus       774 ~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  774 QGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            88899999999999999999999843

>KOG0576|consensus

Probab=99.83  E-value=6.9e-21  Score=182.38  Aligned_cols=169  Identities=19%  Similarity=0.207  Sum_probs=132.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...++|.++++..++.+.|+.|||+.|-+|||||-.|||+++.|.+|++|||.+-...... ....+++||++||||||-
T Consensus       106 TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati-~KrksfiGtpywmapEva  184 (829)
T KOG0576|consen  106 TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI-AKRKSFIGTPYWMAPEVA  184 (829)
T ss_pred             cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh-hhhhcccCCccccchhHH
Confidence            4567899999999999999999999999999999999999999999999999987654322 234568999999999986


Q ss_pred             h--cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 M--GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~--~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .  ..+.|...+|||++|+...|+.--.+|....-+...+..|.+..-.|+.                       +    
T Consensus       185 averkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~-----------------------l----  237 (829)
T KOG0576|consen  185 AVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPT-----------------------L----  237 (829)
T ss_pred             HHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCc-----------------------c----
Confidence            3  2234999999999999999998666665444444445554432211111                       1    


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .-...-++.|-+|++.+|..+|.+||||+-+|+|||...
T Consensus       238 kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence            112334567899999999999999999999999999965

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.81  E-value=1.8e-20  Score=201.13  Aligned_cols=166  Identities=17%  Similarity=0.112  Sum_probs=113.6

Q ss_pred             hcCCCCchhhHHhhcCCCCcc---ccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          81 RSSRRKPFKLSEISATRPDST---IDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      +++..+..++.||+.|++|||   ..+|+||||||+||+++.++..+++ ||.+....     ..+...+|..|+|||++
T Consensus       777 l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~-----~~~~~~~t~~y~aPE~~  850 (968)
T PLN00113        777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC-----TDTKCFISSAYVAPETR  850 (968)
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc-----cCCCccccccccCcccc
Confidence            677777889999999999999   6699999999999999998888776 66654322     12234788999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH-hHHHHHHHh-cCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV-QQLGLITDL-LGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~-~~l~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+.. |+.++|||||||++|||++|..||...... ..+...... .....               ...+..+ ......
T Consensus       851 ~~~~-~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~-~~~~~~  913 (968)
T PLN00113        851 ETKD-ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCH---------------LDMWIDP-SIRGDV  913 (968)
T ss_pred             cCCC-CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccc---------------hhheeCc-cccCCC
Confidence            8765 899999999999999999999998543211 111111100 00000               0000000 000000


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .........+.+++.+||..||++|||+.|+++.
T Consensus       914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            0111122357789999999999999999999874

>KOG1024|consensus

Probab=99.80  E-value=1.2e-19  Score=164.28  Aligned_cols=156  Identities=16%  Similarity=0.199  Sum_probs=127.1

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccc-cccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE-VVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~-~~t~~y~aPEvl~~  159 (395)
                      ++..+.-.++.|++.|++|||.+||||.||-..|++|++...|||+|=.++|-+-+...+..+.. -....||+||.+..
T Consensus       393 vtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n  472 (563)
T KOG1024|consen  393 VTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN  472 (563)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh
Confidence            34445567899999999999999999999999999999999999999999986654333333221 23457999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. |+.++|+||||+++|||+ .|..|+...++.+....+.+..                               ....|
T Consensus       473 ~~-yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy-------------------------------RlaQP  520 (563)
T KOG1024|consen  473 SH-YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY-------------------------------RLAQP  520 (563)
T ss_pred             hh-hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc-------------------------------eecCC
Confidence            75 999999999999999998 6889998888888777765421                               12345


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      -+++.++...+.=||..+|++||+.+|+..
T Consensus       521 ~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  521 FNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            678889999999999999999999999753

>KOG1152|consensus

Probab=99.79  E-value=2.1e-20  Score=176.40  Aligned_cols=110  Identities=19%  Similarity=0.266  Sum_probs=99.4

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      +...+++|..+..++.||+.|+..||+.||||||||-+|++++.+|.+||+|||.|....   ...+..++||..|.|||
T Consensus       662 E~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~k---sgpfd~f~gtv~~aape  738 (772)
T KOG1152|consen  662 EFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTK---SGPFDVFVGTVDYAAPE  738 (772)
T ss_pred             hccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhc---CCCcceeeeeccccchh
Confidence            345678999999999999999999999999999999999999999999999999998753   44577889999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCC
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQA  188 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~  188 (395)
                      ++-|..+.+...|||++|+++|.++...-||..
T Consensus       739 vl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  739 VLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            999988778999999999999999888877753

>KOG1345|consensus

Probab=99.79  E-value=6.8e-20  Score=158.48  Aligned_cols=162  Identities=17%  Similarity=0.182  Sum_probs=114.8

Q ss_pred             CCCchhhHHhhcCCCCccccCccccCCCCCceeec--CCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcCC
Q psy2865          84 RRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ--ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGAR  161 (395)
Q Consensus        84 ~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~--~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~  161 (395)
                      .....++.|++.|+.|+|+.++||||||.+||||-  +...|||||||+.+..+...    .-.--+..|-+||++....
T Consensus       121 ~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV----~~~~~~~~y~~pe~~~~~~  196 (378)
T KOG1345|consen  121 ANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV----KYLEYVNNYHAPELCDTVV  196 (378)
T ss_pred             HHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee----hhhhhhcccCCcHHHhhcc
Confidence            33446899999999999999999999999999994  34579999999988653221    1112355689999875322


Q ss_pred             ----CCCccchHHhHHHHHHHHHcCCCCCCCCChHhH-HHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         162 ----HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQ-LGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       162 ----~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~-l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                          ...+..|+|.||+|+|..+||.+||+.....+. +...+..++.-.                         ..+..
T Consensus       197 ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~-------------------------~~~P~  251 (378)
T KOG1345|consen  197 NEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN-------------------------PALPK  251 (378)
T ss_pred             ccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC-------------------------ccCch
Confidence                246789999999999999999999985543332 111222111100                         01223


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCC---cCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKR---ISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R---~ta~e~L~Hp~f~~  274 (395)
                      .+..+++.+..+.++-|..+|.+|   .++......-|...
T Consensus       252 ~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~  292 (378)
T KOG1345|consen  252 KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK  292 (378)
T ss_pred             hhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence            345678889999999999999999   56666666777643

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.76  E-value=6.9e-19  Score=153.71  Aligned_cols=128  Identities=31%  Similarity=0.399  Sum_probs=108.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..++...+..++.+++.++.+||..|++|+||+|.||+++. ++.++|+|||.+........ ......++..|++||.+
T Consensus        87 ~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~  165 (215)
T cd00180          87 GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGTPAYMAPEVL  165 (215)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCCCCccChhHh
Confidence            35677778889999999999999999999999999999999 89999999999986543211 23445678889999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .....++...|+|++|+++++|                                                          
T Consensus       166 ~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------------------  187 (215)
T cd00180         166 LGKGYYSEKSDIWSLGVILYEL----------------------------------------------------------  187 (215)
T ss_pred             cccCCCCchhhhHHHHHHHHHH----------------------------------------------------------
Confidence            7652478999999999999998                                                          


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHP  270 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp  270 (395)
                           ..+.+++..||..||..||++.+++.|+
T Consensus       188 -----~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -----PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                 1356899999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1025|consensus

Probab=99.75  E-value=1.3e-18  Score=170.33  Aligned_cols=160  Identities=19%  Similarity=0.184  Sum_probs=127.8

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccc-cccccccch
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE-VVTQYYRAP  154 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~-~~t~~y~aP  154 (395)
                      .....+-.+....|..||++|+.|||...+|||||-..|||+..-..|||.|||+|+.+..+...-.... -...-|||-
T Consensus       790 ~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmal  869 (1177)
T KOG1025|consen  790 EHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMAL  869 (1177)
T ss_pred             HhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHH
Confidence            3455666777788999999999999999999999999999999999999999999998776543322222 224569999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      |.+.... |+..+|||||||++||++ .|..|+.+.+..++-..+...                               .
T Consensus       870 e~i~~~~-~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g-------------------------------e  917 (1177)
T KOG1025|consen  870 ESIRIRK-YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG-------------------------------E  917 (1177)
T ss_pred             HHhhccC-CCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc-------------------------------c
Confidence            9988765 999999999999999998 588888887765543333210                               1


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHH
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSAL  267 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L  267 (395)
                      ...-++..+-+..-++.+||..|+..||++.++-
T Consensus       918 RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  918 RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             cCCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence            1345677888999999999999999999988764

>KOG1033|consensus

Probab=99.73  E-value=8.2e-19  Score=165.23  Aligned_cols=156  Identities=31%  Similarity=0.390  Sum_probs=116.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-----CCCcccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-----NKAMTQEVVTQYYRA  153 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-----~~~~~~~~~t~~y~a  153 (395)
                      ...+......++.|++.|+.|   .|.+|||+||.||....++.+||+|||+........     ....+..+||.+||+
T Consensus       354 e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~Yms  430 (516)
T KOG1033|consen  354 EERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMS  430 (516)
T ss_pred             cccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCC
Confidence            344556677889999999999   999999999999999999999999999987665433     235677899999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCC-hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS-PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ||.|.|.. |+.++||||||+|+|||+.   .|.... ....+..|..  |..++.+                       
T Consensus       431 PEQi~g~~-y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~d~r~--g~ip~~~-----------------------  481 (516)
T KOG1033|consen  431 PEQIRGQQ-YSEKVDIYALGLILAELLI---QFSTQFERIATLTDIRD--GIIPPEF-----------------------  481 (516)
T ss_pred             HHHHhhhh-hhhhcchhhHHHHHHHHHH---HhccHHHHHHhhhhhhc--CCCChHH-----------------------
Confidence            99999976 9999999999999999985   222111 1111111111  2222211                       


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                            ...-+.-.+||.+||...|.+||++.+.--|+|.
T Consensus       482 ------~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  482 ------LQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             ------hhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence                  1233456799999999999999988887777775

>KOG2052|consensus

Probab=99.72  E-value=1.9e-18  Score=158.92  Aligned_cols=167  Identities=19%  Similarity=0.302  Sum_probs=111.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc--------CccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID--------GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~--------~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~  147 (395)
                      ..++.+.+...+..++.||++||..        .|.|||||..|||+-.++.+-|+|||||.....+.+   -.....||
T Consensus       303 ~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVG  382 (513)
T KOG2052|consen  303 NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVG  382 (513)
T ss_pred             ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccc
Confidence            4556666777888999999999964        599999999999999999999999999987544322   23456799


Q ss_pred             cccccchhhhhcCC---CCC--ccchHHhHHHHHHHHHcCC----------CCCCCCChHhHHHHHHHhcCCCCHHHHHh
Q psy2865         148 TQYYRAPEILMGAR---HYS--AAVDVWSVGCIFAELLGRR----------ILFQAQSPVQQLGLITDLLGTPTPEEMRH  212 (395)
Q Consensus       148 t~~y~aPEvl~~~~---~~~--~~~DiWSlG~il~ell~g~----------~~f~~~~~~~~l~~i~~~~g~~~~~~~~~  212 (395)
                      |..|||||+|-..-   ++.  ..+||||||.++||++.+.          +||.+..+           ..|+.+.|+.
T Consensus       383 TKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp-----------~DPs~eeMrk  451 (513)
T KOG2052|consen  383 TKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP-----------SDPSFEEMRK  451 (513)
T ss_pred             eeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC-----------CCCCHHHHhc
Confidence            99999999985421   111  2689999999999997432          44443221           2233333332


Q ss_pred             h-h-hhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHH
Q psy2865         213 A-C-DGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSAL  267 (395)
Q Consensus       213 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L  267 (395)
                      + + ...+......|..           ...-..+..+++.||.-||.-|.||--+-
T Consensus       452 VVCv~~~RP~ipnrW~s-----------~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  452 VVCVQKLRPNIPNRWKS-----------DPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             ceeecccCCCCCccccc-----------CHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            2 1 0000000000000           11123456789999999999999986553

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.70  E-value=1.2e-17  Score=148.11  Aligned_cols=118  Identities=28%  Similarity=0.352  Sum_probs=96.1

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      +++.....++.+++.++.+||..+++|+||+|.||+++.++.++|+|||++...............++..|++||++.+.
T Consensus        95 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  174 (225)
T smart00221       95 LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGG  174 (225)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCC
Confidence            66777888999999999999999999999999999999999999999999987543221123445778889999998333


Q ss_pred             CCCCccchHHhHHHHHHHHHcCCCCCCC-CChH-hHHHHH
Q psy2865         161 RHYSAAVDVWSVGCIFAELLGRRILFQA-QSPV-QQLGLI  198 (395)
Q Consensus       161 ~~~~~~~DiWSlG~il~ell~g~~~f~~-~~~~-~~l~~i  198 (395)
                      ..++..+|+||+||++++|++|..||.+ .+.. .....|
T Consensus       175 ~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~  214 (225)
T smart00221      175 KGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVW  214 (225)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHH
Confidence            3478899999999999999999999977 4443 444444

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.69  E-value=4.7e-17  Score=151.85  Aligned_cols=168  Identities=29%  Similarity=0.328  Sum_probs=130.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-CeEEeeCCcccccCCCCCC-----Ccccccccccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPNK-----AMTQEVVTQYYRA  153 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~~-----~~~~~~~t~~y~a  153 (395)
                      .+++.....++.|++.++.|+|..|++|||+||+||+++..+ .++++|||+++........     .....++|..|+|
T Consensus        97 ~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~  176 (384)
T COG0515          97 PLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA  176 (384)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCC
Confidence            678888899999999999999999999999999999999988 7999999999865432211     3466799999999


Q ss_pred             hhhhhcC--CCCCccchHHhHHHHHHHHHcCCCCCCCCCh---HhHHHHHHHhcCCC-CHHHHHhhhhhhhhhhhhcccc
Q psy2865         154 PEILMGA--RHYSAAVDVWSVGCIFAELLGRRILFQAQSP---VQQLGLITDLLGTP-TPEEMRHACDGAKCHMLRQTRK  227 (395)
Q Consensus       154 PEvl~~~--~~~~~~~DiWSlG~il~ell~g~~~f~~~~~---~~~l~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~  227 (395)
                      ||++.+.  ..++...|+||+|++++++++|..||.....   ......+....+.+ ..                    
T Consensus       177 pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  236 (384)
T COG0515         177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA--------------------  236 (384)
T ss_pred             HHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc--------------------
Confidence            9999873  3488999999999999999999999887764   22322222222211 00                    


Q ss_pred             CCccchhhccC----CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         228 SQSLSSLYSLS----SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       228 ~~~~~~~~~~~----~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                             ....    ......+.+++..++..+|..|.++.+...++|...
T Consensus       237 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         237 -------SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             -------cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence                   0000    122357889999999999999999999998877654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.64  E-value=6.7e-17  Score=145.92  Aligned_cols=134  Identities=16%  Similarity=0.150  Sum_probs=91.9

Q ss_pred             chhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC------
Q psy2865          87 PFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA------  160 (395)
Q Consensus        87 ~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~------  160 (395)
                      ..+..|++..+++||..|++|+||+|+|++++.+|.+.|+||+.....+    ........+..|.+||+....      
T Consensus       148 l~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g----~~~~~~~~~~~~~PPe~~~~~~~~~~~  223 (288)
T PF14531_consen  148 LSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAG----TRYRCSEFPVAFTPPELESCAGQFGQN  223 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETT----EEEEGGGS-TTTS-HHHHHHHTSCHHS
T ss_pred             HHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecC----ceeeccCCCcccCChhhhhhhcccCcc
Confidence            4555899999999999999999999999999999999999999887642    222223456789999977442      


Q ss_pred             -CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         161 -RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       161 -~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                       -.++.+.|.|++|+++|.|++|..||...........                                    .+..-.
T Consensus       224 ~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------------------------------------~f~~C~  267 (288)
T PF14531_consen  224 NAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------------------------------------DFSRCR  267 (288)
T ss_dssp             EEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------------------------------------GGTTSS
T ss_pred             cceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------------------------------------cchhcC
Confidence             1278899999999999999999999976532110000                                    111223


Q ss_pred             CCCHHHHHHHHHccccCCCCC
Q psy2865         240 QATGEAVHLLVQMLYFDPTKR  260 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R  260 (395)
                      +.+....+||..||.+||.+|
T Consensus       268 ~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  268 DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             ---HHHHHHHHHHT-SSGGGS
T ss_pred             CcCHHHHHHHHHHccCCcccC
Confidence            677789999999999999987

>KOG1240|consensus

Probab=99.62  E-value=2e-16  Score=159.69  Aligned_cols=158  Identities=22%  Similarity=0.239  Sum_probs=108.8

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCccccc--CCCCCCCcccc----cccccccch
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVE--EPDPNKAMTQE----VVTQYYRAP  154 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~--~~~~~~~~~~~----~~t~~y~aP  154 (395)
                      +..-+.++++=||+.|+..+|..||+|+|||.+||||++=+-+.|+||..-+-.  ..+....++-+    -.-..|.||
T Consensus       117 L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAP  196 (1431)
T KOG1240|consen  117 LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAP  196 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecCh
Confidence            455667899999999999999999999999999999999888999999865432  11111111111    122359999


Q ss_pred             hhhhcCC----------CCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh
Q psy2865         155 EILMGAR----------HYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR  223 (395)
Q Consensus       155 Evl~~~~----------~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  223 (395)
                      |.+....          ..+++.||+|+||+++||+ -|.|||.-    .||-.... .+...++               
T Consensus       197 ERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~-~~~~~~e---------------  256 (1431)
T KOG1240|consen  197 ERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRS-GNADDPE---------------  256 (1431)
T ss_pred             HhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhc-cCccCHH---------------
Confidence            9885411          1567899999999999998 67999951    11111100 0000110               


Q ss_pred             ccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                               .+.+  .-.+...+.||..|++.||++|.+|++.|+-
T Consensus       257 ---------~~Le--~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  257 ---------QLLE--KIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ---------HHHH--hCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence                     0000  1123367899999999999999999999974

>KOG4158|consensus

Probab=99.62  E-value=5.5e-16  Score=141.14  Aligned_cols=155  Identities=22%  Similarity=0.275  Sum_probs=112.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec--CCC--CeEEeeCCcccccCCCCC-----CCcccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ--ATY--SSKICDFGLARVEEPDPN-----KAMTQEVVTQ  149 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~--~~~--~vKl~DFGla~~~~~~~~-----~~~~~~~~t~  149 (395)
                      ...+....+-++.|+++|+.|||.+||.|||+|.+|||+.  +++  .+.|+|||.+-.....+-     ......-|.-
T Consensus       336 ~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa  415 (598)
T KOG4158|consen  336 RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNA  415 (598)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcc
Confidence            3455667778999999999999999999999999999995  333  368999997653222111     1112234667


Q ss_pred             cccchhhhhcCCC------CCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh
Q psy2865         150 YYRAPEILMGARH------YSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR  223 (395)
Q Consensus       150 ~y~aPEvl~~~~~------~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  223 (395)
                      ..||||+....+.      | .++|.|+.|.+.||+++..-||.+.-....-..                          
T Consensus       416 ~lmAPEi~ta~PGp~avvny-~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r--------------------------  468 (598)
T KOG4158|consen  416 KLMAPEIATAVPGPNAVVNY-EKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR--------------------------  468 (598)
T ss_pred             eecchhhhhcCCCCceeecc-chhhhhhhhhhHHHHhccCCcccccchheechh--------------------------
Confidence            7899999864331      3 378999999999999999999987432110000                          


Q ss_pred             ccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHH
Q psy2865         224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVN  264 (395)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~  264 (395)
                          ......+..++..+++.+.+|+..+|+.||++|+++.
T Consensus       469 ----~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  469 ----TYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             ----hhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence                0001234567788999999999999999999999854

>KOG1164|consensus

Probab=99.58  E-value=3.7e-15  Score=140.03  Aligned_cols=162  Identities=15%  Similarity=0.054  Sum_probs=119.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-----CCeEEeeCCccc--ccCCCCCC------C-cc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-----YSSKICDFGLAR--VEEPDPNK------A-MT  143 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-----~~vKl~DFGla~--~~~~~~~~------~-~~  143 (395)
                      .+.|+..++..++.|++.+|.++|+.|++||||||+|++++..     ..+.|.|||+|+  ........      . ..
T Consensus       116 ~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~  195 (322)
T KOG1164|consen  116 PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKG  195 (322)
T ss_pred             CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCcc
Confidence            5789999999999999999999999999999999999999865     458999999999  32211111      1 23


Q ss_pred             cccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh
Q psy2865         144 QEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR  223 (395)
Q Consensus       144 ~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  223 (395)
                      .+.||..|.++.+..+.. .+..-|+||++.++.+|+.|..||.+.........+......                   
T Consensus       196 ~~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~-------------------  255 (322)
T KOG1164|consen  196 LFRGTLRYASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK-------------------  255 (322)
T ss_pred             CCCCccccccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh-------------------
Confidence            456999999999999887 799999999999999999999999776543333332211000                   


Q ss_pred             ccccCCccchhhc-cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         224 QTRKSQSLSSLYS-LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       224 ~~~~~~~~~~~~~-~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                               .... .....+..+..++.-+-..+...+|....+..
T Consensus       256 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  256 ---------LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             ---------hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence                     0000 22334456677777666678888888776654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.39  E-value=1.5e-13  Score=118.27  Aligned_cols=103  Identities=14%  Similarity=0.047  Sum_probs=76.1

Q ss_pred             hhhHHhhcCCCCccccCccccCC-CCCceeecCCCCeEEeeCCcccccCCCCCC--Ccc----------cccccccccch
Q psy2865          88 FKLSEISATRPDSTIDGYQARQP-TRQLVMYQATYSSKICDFGLARVEEPDPNK--AMT----------QEVVTQYYRAP  154 (395)
Q Consensus        88 ~~~~qi~~~l~~lH~~~iiHrDl-kp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~----------~~~~t~~y~aP  154 (395)
                      .++.|++.++.++|..||+|||| ||.|||++.++.++|+|||+|........-  .+.          -...++.|++|
T Consensus        95 ~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~  174 (218)
T PRK12274         95 AYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTP  174 (218)
T ss_pred             HHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCH
Confidence            46789999999999999999999 799999999999999999999854422100  000          01246778888


Q ss_pred             hhhhcCCCCC-ccchHHhHHHHHHHHHcCCCCCCCCC
Q psy2865         155 EILMGARHYS-AAVDVWSVGCIFAELLGRRILFQAQS  190 (395)
Q Consensus       155 Evl~~~~~~~-~~~DiWSlG~il~ell~g~~~f~~~~  190 (395)
                      +--......+ ...++.+.|+.+|.++||..++.+..
T Consensus       175 ~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        175 VERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            7543221133 45667789999999999998876554

>KOG1023|consensus

Probab=99.35  E-value=9.7e-13  Score=126.55  Aligned_cols=160  Identities=19%  Similarity=0.158  Sum_probs=111.2

Q ss_pred             CCCCchhhHHhhcCCCCccccCc-cccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhhcC
Q psy2865          83 SRRKPFKLSEISATRPDSTIDGY-QARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lH~~~i-iHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      .--....+++|+.|+.|+|...| .|+.++..|++++....+||.|||+......... .......-...|.|||++.+.
T Consensus        47 ~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~  126 (484)
T KOG1023|consen   47 YFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGA  126 (484)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccc
Confidence            33445678999999999999876 9999999999999999999999999876532100 111112234579999999763


Q ss_pred             C--C----CCccchHHhHHHHHHHHHcCCCCCCCCCh----HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc
Q psy2865         161 R--H----YSAAVDVWSVGCIFAELLGRRILFQAQSP----VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS  230 (395)
Q Consensus       161 ~--~----~~~~~DiWSlG~il~ell~g~~~f~~~~~----~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (395)
                      .  .    .+...||||+|+|++|+++...||.....    .+.+..+.+ .|..+                        
T Consensus       127 ~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~~------------------------  181 (484)
T KOG1023|consen  127 LSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-GGSNP------------------------  181 (484)
T ss_pred             ccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-cCCCC------------------------
Confidence            1  1    36679999999999999999999976432    122222222 11100                        


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHH
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSAL  267 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L  267 (395)
                      ++..........+....++..|+.-+|..||++.++-
T Consensus       182 ~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  182 FRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             cCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence            0111111113445788999999999999999998864

>KOG0606|consensus

Probab=99.35  E-value=1.4e-12  Score=132.23  Aligned_cols=167  Identities=22%  Similarity=0.228  Sum_probs=133.6

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC----C------------------
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD----P------------------  138 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~----~------------------  138 (395)
                      ++.+-++.++..+.+++.|||...++|||++|.|+|+..+++.++.|||.......-    .                  
T Consensus       901 ~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~  980 (1205)
T KOG0606|consen  901 LSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSER  980 (1205)
T ss_pred             cccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccc
Confidence            677789999999999999999999999999999999999999999999843322100    0                  


Q ss_pred             ------C--CCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHH
Q psy2865         139 ------N--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEM  210 (395)
Q Consensus       139 ------~--~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~  210 (395)
                            .  ..-...++|+.|.+||.++|.. .+..+|+|++|++++|.++|.++|........+..|....-       
T Consensus       981 ~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~------- 1052 (1205)
T KOG0606|consen  981 RPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDI------- 1052 (1205)
T ss_pred             ccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCC-------
Confidence                  0  0122347899999999999987 68899999999999999999999999888777766542110       


Q ss_pred             HhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHH---HHHcCCccccCcc
Q psy2865         211 RHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVN---SALCHPYLDEGRL  277 (395)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~---e~L~Hp~f~~~~~  277 (395)
                                            .+...+...+..+.+++..+|..+|.+|.+|.   ++-.||||+...+
T Consensus      1053 ----------------------~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1053 ----------------------PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDW 1100 (1205)
T ss_pred             ----------------------CCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCc
Confidence                                  11223345678899999999999999999877   8899999987543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.33  E-value=4.2e-13  Score=126.50  Aligned_cols=72  Identities=17%  Similarity=0.128  Sum_probs=59.4

Q ss_pred             chhhHHhhcCCCCccccCccccCC-CCCceeecCCCCeEEeeCCcccccCCCCC-------CCcccccccccccchhhhh
Q psy2865          87 PFKLSEISATRPDSTIDGYQARQP-TRQLVMYQATYSSKICDFGLARVEEPDPN-------KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        87 ~~~~~qi~~~l~~lH~~~iiHrDl-kp~Nil~~~~~~vKl~DFGla~~~~~~~~-------~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++.|++.||.|||+.||+|||| ||+|||++.++.++|+|||+|+.+.....       ...+..++++.|+|||++.
T Consensus       114 ~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        114 PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            357899999999999999999999 99999999999999999999997543221       1124557788899999884

>KOG1163|consensus

Probab=99.32  E-value=4.1e-13  Score=114.96  Aligned_cols=115  Identities=13%  Similarity=0.106  Sum_probs=93.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC---CCeEEeeCCcccccCCCC------CCCccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT---YSSKICDFGLARVEEPDP------NKAMTQEVVT  148 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~---~~vKl~DFGla~~~~~~~------~~~~~~~~~t  148 (395)
                      .+.|+-.++.-.+.|++.-+.|+|..++|||||||+|+|++-+   ..+-|+|||+|..+.+..      ...-....||
T Consensus       105 ~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGT  184 (341)
T KOG1163|consen  105 SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGT  184 (341)
T ss_pred             hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCcccee
Confidence            3567777888999999999999999999999999999999743   457899999998764321      1223345789


Q ss_pred             ccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh
Q psy2865         149 QYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ  193 (395)
Q Consensus       149 ~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~  193 (395)
                      ..|.+--...|.. -+..-|+=|+|.++..+..|..||+|.....
T Consensus       185 aRYASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~t  228 (341)
T KOG1163|consen  185 ARYASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAAT  228 (341)
T ss_pred             eeehhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhh
Confidence            9999988887765 5788999999999988899999999875443

>KOG1165|consensus

Probab=99.30  E-value=7.9e-13  Score=118.16  Aligned_cols=121  Identities=15%  Similarity=0.127  Sum_probs=99.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-----CCeEEeeCCcccccCCCCCC------Cccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-----YSSKICDFGLARVEEPDPNK------AMTQEV  146 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-----~~vKl~DFGla~~~~~~~~~------~~~~~~  146 (395)
                      ++.||-.++.-++.|++.-+.|+|.+.+|+|||||+|+||+..     ..|.|+|||+|....++...      ...+..
T Consensus       118 gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLs  197 (449)
T KOG1165|consen  118 GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLS  197 (449)
T ss_pred             cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccc
Confidence            4568888999999999999999999999999999999999743     34899999999987654322      123457


Q ss_pred             ccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC---ChHhHHHHHH
Q psy2865         147 VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ---SPVQQLGLIT  199 (395)
Q Consensus       147 ~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~---~~~~~l~~i~  199 (395)
                      ||..||+--..+|.. -+..-|+=|+|-+++..|-|..||+|.   +..+-+.+|-
T Consensus       198 GTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIG  252 (449)
T KOG1165|consen  198 GTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIG  252 (449)
T ss_pred             cceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhc
Confidence            999999999888876 688999999999999999999999985   3344455553

>KOG0601|consensus

Probab=99.28  E-value=4.7e-12  Score=122.03  Aligned_cols=109  Identities=17%  Similarity=0.098  Sum_probs=88.0

Q ss_pred             hhhcCCCCchhhHHhhc----CCCCccccCccccCCCCCceeecCC-CCeEEeeCCcccccCCCCCC----Ccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISA----TRPDSTIDGYQARQPTRQLVMYQAT-YSSKICDFGLARVEEPDPNK----AMTQEVVTQ  149 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~----~l~~lH~~~iiHrDlkp~Nil~~~~-~~vKl~DFGla~~~~~~~~~----~~~~~~~t~  149 (395)
                      ..+++.....++.+...    |+..+|..+++|-|++|.||++..+ ..++++|||+...+....-.    .....-+..
T Consensus       213 ~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~  292 (524)
T KOG0601|consen  213 NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDC  292 (524)
T ss_pred             ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCc
Confidence            34667777788888888    9999999999999999999999999 89999999998876542211    011124567


Q ss_pred             cccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC
Q psy2865         150 YYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ  189 (395)
Q Consensus       150 ~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~  189 (395)
                      .|++||++.+.  ++...||+|+|-++.+..+|..++...
T Consensus       293 ~Y~~ke~~~~l--~~~~~di~sl~ev~l~~~l~~~~~~~g  330 (524)
T KOG0601|consen  293 IYAAKELLNGL--ATFASDIFSLGEVILEAILGSHLPSVG  330 (524)
T ss_pred             eEeChhhhccc--cchHhhhcchhhhhHhhHhhcccccCC
Confidence            89999999874  789999999999999998888776544

>KOG0195|consensus

Probab=99.20  E-value=2.6e-11  Score=105.76  Aligned_cols=146  Identities=18%  Similarity=0.153  Sum_probs=108.1

Q ss_pred             CCCCchhhHHhhcCCCCccccC-cccc-CCCCCceeecCCCCeEE--eeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          83 SRRKPFKLSEISATRPDSTIDG-YQAR-QPTRQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lH~~~-iiHr-Dlkp~Nil~~~~~~vKl--~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++..++-+++.|++|||+.. ++-| -|....++||.+...+|  +|--++..        .......+.||+||.+.
T Consensus       288 ~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq--------e~gr~y~pawmspealq  359 (448)
T KOG0195|consen  288 HSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ--------EVGRAYSPAWMSPEALQ  359 (448)
T ss_pred             cchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee--------ccccccCcccCCHHHHh
Confidence            4456667889999999999873 4433 47788899998877665  44333322        12234578899999997


Q ss_pred             cCCCC--CccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         159 GARHY--SAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       159 ~~~~~--~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      ..+..  -.++|||||++++|||.|+..||...++.+.-.+|. +-|                             -...
T Consensus       360 rkped~n~raadmwsfaillwel~trevpfadlspmecgmkia-leg-----------------------------lrv~  409 (448)
T KOG0195|consen  360 RKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA-LEG-----------------------------LRVH  409 (448)
T ss_pred             cCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-hcc-----------------------------cccc
Confidence            65532  247999999999999999999999888776544442 111                             1235


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHH
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSA  266 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~  266 (395)
                      +++..++....|+.-|+.-||.+||.+..+
T Consensus       410 ippgis~hm~klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  410 IPPGISRHMNKLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             CCCCccHHHHHHHHHHhcCCCCcCCCccee
Confidence            788999999999999999999999987765

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.19  E-value=2e-12  Score=113.55  Aligned_cols=76  Identities=14%  Similarity=0.171  Sum_probs=59.0

Q ss_pred             hhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcCCCCCccch
Q psy2865          89 KLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD  168 (395)
Q Consensus        89 ~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~~~~~~~D  168 (395)
                      .+.+++.++..+|..|++|||++|+||+++.++ ++|+|||.......+.   ..          ..+++.. .|+.++|
T Consensus       140 ~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~---a~----------d~~vler-~y~~~~d  204 (232)
T PRK10359        140 VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK---AK----------DRIDLER-HYGIKNE  204 (232)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh---hH----------HHHHHHh-Hhccccc
Confidence            466899999999999999999999999999988 9999999886532110   00          1133443 4788999


Q ss_pred             HHhHHHHHHHH
Q psy2865         169 VWSVGCIFAEL  179 (395)
Q Consensus       169 iWSlG~il~el  179 (395)
                      +||||+++.-+
T Consensus       205 i~~lg~~~~~~  215 (232)
T PRK10359        205 IKDLGYYLLIY  215 (232)
T ss_pred             ccceeEeehHH
Confidence            99999987644

>KOG2137|consensus

Probab=99.17  E-value=1.6e-11  Score=120.11  Aligned_cols=165  Identities=16%  Similarity=0.219  Sum_probs=121.7

Q ss_pred             cCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcc-------c-cccccccc
Q psy2865          82 SSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMT-------Q-EVVTQYYR  152 (395)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~-------~-~~~t~~y~  152 (395)
                      +.+..-.-+.+++.|+.|+|.. ++||+.|.|++|.++.++..||+.|+++..........+.       . ......|.
T Consensus        97 aTe~~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~  176 (700)
T KOG2137|consen   97 ATEDGFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFL  176 (700)
T ss_pred             cccHhhhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccc
Confidence            3444445566777899999976 8999999999999999999999999987654331111111       1 12345799


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHH-cCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell-~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      |||++.+.. .+.++|++|+||.+|.+. .|..+|.+.........-...++.                           
T Consensus       177 apE~~~~~~-~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~---------------------------  228 (700)
T KOG2137|consen  177 APEYLLGTT-NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA---------------------------  228 (700)
T ss_pred             cchhhcccc-ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc---------------------------
Confidence            999998854 789999999999999998 888888766433222221111110                           


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                       ..+.....++.++++-|.++|..++..||++.+++.-|||++.
T Consensus       229 -~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~  271 (700)
T KOG2137|consen  229 -GAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDP  271 (700)
T ss_pred             -ccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence             1123346788899999999999999999999999999999874

>KOG1035|consensus

Probab=99.10  E-value=1.1e-10  Score=119.95  Aligned_cols=153  Identities=15%  Similarity=0.130  Sum_probs=100.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCC---ceeecCCCCeEEe--eCCcccccCCCCCCCccccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQ---LVMYQATYSSKIC--DFGLARVEEPDPNKAMTQEVVTQYYR  152 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~---Nil~~~~~~vKl~--DFGla~~~~~~~~~~~~~~~~t~~y~  152 (395)
                      -...+-.+.+.+..+++.|++|+|.....|.=+..+   +-..+..+.+.+.  ||+........  ........+..|-
T Consensus       280 v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~--~~~~~~~~~~~~~  357 (1351)
T KOG1035|consen  280 VGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDN--EKSFSDLLAEIRN  357 (1351)
T ss_pred             ccccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCc--ccchhhcCccccc
Confidence            344456677788999999999999986666555444   4444556667766  88877655432  2233345666788


Q ss_pred             chhhhhcCCCCCcc--chHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc
Q psy2865         153 APEILMGARHYSAA--VDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS  230 (395)
Q Consensus       153 aPEvl~~~~~~~~~--~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (395)
                      ++|...... +..+  .|+|.+|.....+..|..+-.      ....+..++                            
T Consensus       358 ~~e~~~~~~-~~~~r~~dL~~lgll~~~~~~~~~i~~------~~~~~~~~l----------------------------  402 (1351)
T KOG1035|consen  358 ADEDLKENT-AKKSRLTDLWCLGLLLLQLSQGEDISE------KSAVPVSLL----------------------------  402 (1351)
T ss_pred             ccccccccc-chhhhhhHHHHHHHHHhhhhhcCcccc------cccchhhhh----------------------------
Confidence            888775543 4443  699999999888876644311      001111100                            


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                             .........+++.+|+.-++++|+++.+++.|+|...
T Consensus       403 -------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  403 -------DVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRF  439 (1351)
T ss_pred             -------ccccchhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence                   0111115668899999999999999999999999864

>KOG1166|consensus

Probab=99.06  E-value=5.8e-11  Score=122.35  Aligned_cols=106  Identities=10%  Similarity=0.059  Sum_probs=90.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-------CCCeEEeeCCcccccCC-CCCCCcccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-------TYSSKICDFGLARVEEP-DPNKAMTQEVVTQ  149 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-------~~~vKl~DFGla~~~~~-~~~~~~~~~~~t~  149 (395)
                      .+.+.+.-+-++..|++.-+..||..+|||+||||+|+||..       +..++|+|||-|.-+.. .....+...++|-
T Consensus       788 ~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td  867 (974)
T KOG1166|consen  788 NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTD  867 (974)
T ss_pred             CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccc
Confidence            345677788899999999999999999999999999999963       34589999998864332 1234677788999


Q ss_pred             cccchhhhhcCCCCCccchHHhHHHHHHHHHcCCC
Q psy2865         150 YYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRI  184 (395)
Q Consensus       150 ~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~  184 (395)
                      .+-++|+..|.+ |++.+|.|.|+.+++.||.|++
T Consensus       868 ~f~C~EM~~grp-WtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  868 LFDCIEMREGRP-WTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             cchhHHHhcCCC-CchhhhhHHHHHHHHHHHHHHH
Confidence            999999999987 9999999999999999999865

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.04  E-value=3e-11  Score=104.43  Aligned_cols=55  Identities=7%  Similarity=-0.115  Sum_probs=49.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCc-cccCccccCCCCCceeecCCCCeEEeeCCccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDS-TIDGYQARQPTRQLVMYQATYSSKICDFGLARVE  134 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~l-H~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~  134 (395)
                      ..++...+..++.|++.+|.++ |..||+||||||+|||++ ++.++|+|||+|...
T Consensus       112 ~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         112 APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            4677888899999999999999 799999999999999998 578999999999753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.01  E-value=6e-11  Score=102.73  Aligned_cols=55  Identities=9%  Similarity=-0.026  Sum_probs=49.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVE  134 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~  134 (395)
                      ..++...+..++.|++.++.++|+ .||+||||||.|||++ ++.++|+|||+|...
T Consensus       112 ~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~  167 (190)
T cd05145         112 VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceec
Confidence            345667788899999999999999 9999999999999999 889999999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0594|consensus

Probab=98.84  E-value=5.4e-10  Score=101.34  Aligned_cols=41  Identities=44%  Similarity=0.667  Sum_probs=37.8

Q ss_pred             cccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         355 LCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       355 ~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++..++.|++.|+.|||+++|+||||||+||||+..|.+|+
T Consensus       121 ~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKl  161 (323)
T KOG0594|consen  121 LIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKL  161 (323)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEee
Confidence            46667788999999999999999999999999999999985

>KOG0600|consensus

Probab=98.79  E-value=1.1e-09  Score=103.25  Aligned_cols=59  Identities=32%  Similarity=0.421  Sum_probs=46.9

Q ss_pred             hhHHHHHHHhhhcC----CCCCcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         337 KEEMHKFIAEQLNT----SRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       337 ~~~i~~~I~~~~~~----~~~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++|...+...+..    ..++.+..++.|++.||.|||++||+|||||.+|||||++|+|||
T Consensus       197 FeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKi  259 (560)
T KOG0600|consen  197 FEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKI  259 (560)
T ss_pred             EecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEe
Confidence            34555555544433    234557778889999999999999999999999999999999986

>KOG0592|consensus

Probab=98.78  E-value=1.4e-09  Score=103.34  Aligned_cols=38  Identities=37%  Similarity=0.643  Sum_probs=35.0

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++++|+.++.|||+.|||||||||+||||+.+|.+||
T Consensus       178 ~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikI  215 (604)
T KOG0592|consen  178 FYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKI  215 (604)
T ss_pred             HHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEE
Confidence            36778899999999999999999999999999998875

>KOG0658|consensus

Probab=98.74  E-value=3.4e-09  Score=96.37  Aligned_cols=58  Identities=41%  Similarity=0.599  Sum_probs=44.1

Q ss_pred             hHHHHHHHhhhc-CCCCCc--ccCcchhhhhcccccccCceEecCCCCCCeeecCC-CcccC
Q psy2865         338 EEMHKFIAEQLN-TSRVPL--CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN-CILKW  395 (395)
Q Consensus       338 ~~i~~~I~~~~~-~~~~p~--~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~-~~~k~  395 (395)
                      +.++..+..+.. ...+|+  +.-++.|+++|+.|||+.||+||||||.|+|||.. |.+||
T Consensus       106 ~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKi  167 (364)
T KOG0658|consen  106 ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKI  167 (364)
T ss_pred             HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEe
Confidence            344444444322 233443  66789999999999999999999999999999987 88886

>KOG0661|consensus

Probab=98.72  E-value=3.1e-09  Score=99.58  Aligned_cols=46  Identities=26%  Similarity=0.367  Sum_probs=39.9

Q ss_pred             CCCCCcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         350 TSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       350 ~~~~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ....+.+.|+++||+.||.|||.+|++|||+||+|||+..+-++||
T Consensus       106 ~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKi  151 (538)
T KOG0661|consen  106 LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKI  151 (538)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEe
Confidence            3445558899999999999999999999999999999997666665

>smart00090 RIO RIO-like kinase

Probab=98.71  E-value=2.6e-09  Score=95.61  Aligned_cols=52  Identities=8%  Similarity=-0.052  Sum_probs=46.3

Q ss_pred             cCCCCchhhHHhhcCCCCccccC-ccccCCCCCceeecCCCCeEEeeCCccccc
Q psy2865          82 SSRRKPFKLSEISATRPDSTIDG-YQARQPTRQLVMYQATYSSKICDFGLARVE  134 (395)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lH~~~-iiHrDlkp~Nil~~~~~~vKl~DFGla~~~  134 (395)
                      ....+..++.||+.++.+||..| |+||||||+||+++ ++.++|+|||+|...
T Consensus       146 ~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      146 EEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            33445678999999999999999 99999999999999 889999999998753

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.70  E-value=5.2e-09  Score=93.78  Aligned_cols=45  Identities=9%  Similarity=0.034  Sum_probs=42.0

Q ss_pred             hhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865          89 KLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus        89 ~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      .+.+|+.++.+||+.||+||||||.|||++.++.++|+|||.+..
T Consensus       147 ~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        147 QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            367899999999999999999999999999989999999999875

>KOG0593|consensus

Probab=98.69  E-value=4.1e-09  Score=93.53  Aligned_cols=41  Identities=32%  Similarity=0.560  Sum_probs=37.5

Q ss_pred             cccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         355 LCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       355 ~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .+..+.+|++.++.|||++++|||||||+||||+.+|++|+
T Consensus       102 ~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKL  142 (396)
T KOG0593|consen  102 LVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKL  142 (396)
T ss_pred             HHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEe
Confidence            35667789999999999999999999999999999999885

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.66  E-value=9e-09  Score=89.72  Aligned_cols=51  Identities=12%  Similarity=-0.015  Sum_probs=46.2

Q ss_pred             CCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCccccc
Q psy2865          84 RRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVE  134 (395)
Q Consensus        84 ~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~  134 (395)
                      .....++.+++.++.++|..||+||||+|.||+++.++.++|+|||+|...
T Consensus       125 ~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         125 EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            345568899999999999999999999999999999999999999999654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0664|consensus

Probab=98.64  E-value=1.4e-08  Score=88.98  Aligned_cols=40  Identities=65%  Similarity=0.937  Sum_probs=37.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +.-+.+||++|+.|||+.||+||||||.|+||+.|+++||
T Consensus       158 vKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKI  197 (449)
T KOG0664|consen  158 VKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKI  197 (449)
T ss_pred             hhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEe
Confidence            4558889999999999999999999999999999999986

>KOG0660|consensus

Probab=98.64  E-value=1.4e-08  Score=92.25  Aligned_cols=37  Identities=49%  Similarity=0.852  Sum_probs=33.6

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +.+|+++|+.|+||.||+||||||+|+|++.++.+||
T Consensus       130 f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI  166 (359)
T KOG0660|consen  130 FLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKI  166 (359)
T ss_pred             HHHHHHHhcchhhcccccccccchhheeeccCCCEEe
Confidence            4456699999999999999999999999999998886

>KOG1266|consensus

Probab=98.63  E-value=2.8e-08  Score=89.38  Aligned_cols=160  Identities=18%  Similarity=0.097  Sum_probs=103.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc--CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC----Ccccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID--GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK----AMTQEVVTQYY  151 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~--~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~----~~~~~~~t~~y  151 (395)
                      .+.+....-..|..||+.||.|||+-  .|+|+++.-+-|++..+|-|||.---... .......    ......+-++|
T Consensus       170 ~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~  248 (458)
T KOG1266|consen  170 QKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGF  248 (458)
T ss_pred             hhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCcc
Confidence            34455555667899999999999986  69999999999999999999875322111 1100000    01112345678


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCC-CCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCc
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELLGRRILF-QAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS  230 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f-~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (395)
                      -+||.=.... .+.++|||+||....+|..|..-- .+.+....-..|..+.                            
T Consensus       249 ~a~~sg~~tn-~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i----------------------------  299 (458)
T KOG1266|consen  249 SAPESGTTTN-TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVI----------------------------  299 (458)
T ss_pred             ccCCcCcccc-cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhe----------------------------
Confidence            8888644333 577899999998888998776432 2222221111111100                            


Q ss_pred             cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       231 ~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                          +   .-..+.-++++.+||.-.|..||+|..+|.||.+-.
T Consensus       300 ----~---~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe  336 (458)
T KOG1266|consen  300 ----I---GLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE  336 (458)
T ss_pred             ----e---eccCccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence                0   001122357899999999999999999999998643

>KOG0585|consensus

Probab=98.61  E-value=9.2e-09  Score=96.49  Aligned_cols=33  Identities=48%  Similarity=0.761  Sum_probs=31.3

Q ss_pred             hhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       363 i~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.||.|||++|||||||||+|+||+.+|.+||
T Consensus       219 vv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKI  251 (576)
T KOG0585|consen  219 VVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKI  251 (576)
T ss_pred             HHHHHHHHHhcCeeccccchhheEEcCCCcEEe
Confidence            379999999999999999999999999999986

>KOG0659|consensus

Probab=98.60  E-value=1.1e-08  Score=89.32  Aligned_cols=40  Identities=45%  Similarity=0.602  Sum_probs=36.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +.+++.++++|+.|||++.|+||||||.|+||+.+|.+||
T Consensus       103 iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKi  142 (318)
T KOG0659|consen  103 IKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKI  142 (318)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEe
Confidence            3456668899999999999999999999999999999986

>PRK10345 hypothetical protein; Provisional

Probab=98.59  E-value=9.5e-09  Score=89.90  Aligned_cols=49  Identities=10%  Similarity=-0.030  Sum_probs=39.3

Q ss_pred             hcCCCCchhhHHhhcCC-CCccccCccccCCCCCceeecC----CCCeEEeeCCcc
Q psy2865          81 RSSRRKPFKLSEISATR-PDSTIDGYQARQPTRQLVMYQA----TYSSKICDFGLA  131 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l-~~lH~~~iiHrDlkp~Nil~~~----~~~vKl~DFGla  131 (395)
                      +++.  ..++.|++.++ .|||+.+|+||||||+|||++.    ++.++|+||+.+
T Consensus       103 ~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        103 YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            4444  35678888777 9999999999999999999974    347999995444

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.55  E-value=2.4e-08  Score=86.04  Aligned_cols=50  Identities=10%  Similarity=-0.096  Sum_probs=46.1

Q ss_pred             CCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCccccc
Q psy2865          84 RRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVE  134 (395)
Q Consensus        84 ~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~  134 (395)
                      ..+..++.+++.++.++|. .||+|+||+|+||+++ ++.++|+|||+|...
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~  164 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence            5667889999999999999 9999999999999999 899999999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601|consensus

Probab=98.55  E-value=4.2e-08  Score=95.00  Aligned_cols=159  Identities=14%  Similarity=0.006  Sum_probs=115.3

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-CCeEEeeCCcccccCCCCCCCccccccccccc-ch
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-YSSKICDFGLARVEEPDPNKAMTQEVVTQYYR-AP  154 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~-aP  154 (395)
                      -..++.++..+....|++.++.++|+..++|+|++|+||++..+ +..++.|||.+..+..    ......++-+|. ..
T Consensus       359 ~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~----~~~~~~~~~r~~p~~  434 (524)
T KOG0601|consen  359 TSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF----SSGVFHHIDRLYPIA  434 (524)
T ss_pred             HHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce----ecccccccccccccc
Confidence            34567888899999999999999999999999999999999876 7789999998754211    111223333444 35


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |+++....+...+|++|||..+.+.++|.++-...+.   ...|..                                ..
T Consensus       435 ~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~--------------------------------~~  479 (524)
T KOG0601|consen  435 EILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRS--------------------------------GD  479 (524)
T ss_pred             hhhccccccccccccccccccccccccCcccCccccc---ceeeec--------------------------------cc
Confidence            6665554588899999999999999999776543221   111110                                11


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+.....+..+...|+..++..|+.+.++..|.-|..
T Consensus       480 ~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  480 TPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             ccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence            2222333467788889999999999999999999887753

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.55  E-value=3.5e-08  Score=85.96  Aligned_cols=46  Identities=20%  Similarity=0.162  Sum_probs=43.2

Q ss_pred             hhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCccccc
Q psy2865          88 FKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVE  134 (395)
Q Consensus        88 ~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~  134 (395)
                      .++.+++.++.++|..|++|+|++|.||+++ ++.++|+|||++...
T Consensus        94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            6799999999999999999999999999999 889999999998763

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0663|consensus

Probab=98.54  E-value=2.4e-08  Score=89.83  Aligned_cols=37  Identities=43%  Similarity=0.580  Sum_probs=34.6

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .+.|++.|+.|||..+|+||||||+|+|+++.|.+||
T Consensus       182 L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKi  218 (419)
T KOG0663|consen  182 LMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKI  218 (419)
T ss_pred             HHHHHHHHHHHHhhceeEecccchhheeeccCCcEEe
Confidence            4568899999999999999999999999999999986

>KOG0198|consensus

Probab=98.52  E-value=2.4e-08  Score=91.82  Aligned_cols=45  Identities=38%  Similarity=0.541  Sum_probs=39.6

Q ss_pred             CCCCcccCcchhhhhcccccccCceEecCCCCCCeeecC-CCcccC
Q psy2865         351 SRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNS-NCILKW  395 (395)
Q Consensus       351 ~~~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~-~~~~k~  395 (395)
                      ...+.+..++.|++.|+.|||++|||||||||.||||+. +|.+||
T Consensus       114 l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~Kl  159 (313)
T KOG0198|consen  114 LPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKL  159 (313)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEe
Confidence            355567778889999999999999999999999999999 688775

>KOG0598|consensus

Probab=98.52  E-value=1.6e-08  Score=92.11  Aligned_cols=40  Identities=33%  Similarity=0.456  Sum_probs=34.9

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ...+++.|+.+|.|||+.|||||||||+||||+..|.+++
T Consensus       127 arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~L  166 (357)
T KOG0598|consen  127 ARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKL  166 (357)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEE
Confidence            3345667799999999999999999999999999998764

>KOG0581|consensus

Probab=98.52  E-value=2.1e-08  Score=91.46  Aligned_cols=40  Identities=48%  Similarity=0.679  Sum_probs=34.7

Q ss_pred             ccCcchhhhhccccccc-CceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHS-ARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~-~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .-.++.++++||.|||. ++||||||||+||||+..|-+||
T Consensus       180 L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKi  220 (364)
T KOG0581|consen  180 LGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKI  220 (364)
T ss_pred             HHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEe
Confidence            33455566999999995 99999999999999999999986

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.51  E-value=4.3e-08  Score=86.22  Aligned_cols=48  Identities=19%  Similarity=0.086  Sum_probs=44.5

Q ss_pred             CCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865          85 RKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus        85 ~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      ....++.+++.++.++|+.|++|+|++|.|||++ ++.++|+|||++..
T Consensus        96 ~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         96 EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            5567899999999999999999999999999999 78899999999876

>KOG0616|consensus

Probab=98.49  E-value=3.4e-08  Score=87.54  Aligned_cols=44  Identities=36%  Similarity=0.493  Sum_probs=39.5

Q ss_pred             CCCcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       352 ~~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..+....++++|+.++.|||+.+|++|||||+|||||.+|-+||
T Consensus       142 ~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKi  185 (355)
T KOG0616|consen  142 SEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKI  185 (355)
T ss_pred             CchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEE
Confidence            34556678889999999999999999999999999999999986

>KOG0662|consensus

Probab=98.47  E-value=3.4e-08  Score=81.34  Aligned_cols=42  Identities=38%  Similarity=0.564  Sum_probs=37.9

Q ss_pred             CcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         354 PLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       354 p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.+++.|+++|+.|||+++++||||||.|+||+.+|.+|+
T Consensus       101 ~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkl  142 (292)
T KOG0662|consen  101 EIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKL  142 (292)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEe
Confidence            345667889999999999999999999999999999999875

>KOG0615|consensus

Probab=98.47  E-value=5.5e-08  Score=89.85  Aligned_cols=39  Identities=44%  Similarity=0.752  Sum_probs=31.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCC---CcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN---CILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~---~~~k~  395 (395)
                      ..+..|++.++.|||++||+||||||+||||..+   ..+||
T Consensus       279 K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKI  320 (475)
T KOG0615|consen  279 KLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKI  320 (475)
T ss_pred             HHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEe
Confidence            3344556999999999999999999999999876   44553

>KOG0583|consensus

Probab=98.38  E-value=6.8e-08  Score=92.01  Aligned_cols=37  Identities=38%  Similarity=0.574  Sum_probs=33.2

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCC-CcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSN-CILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~-~~~k~  395 (395)
                      +..|++.|+.|||++||+||||||+||||+.+ +.+||
T Consensus       125 ~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl  162 (370)
T KOG0583|consen  125 YFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKL  162 (370)
T ss_pred             HHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEE
Confidence            44566999999999999999999999999999 88875

>KOG0599|consensus

Probab=98.36  E-value=1.1e-07  Score=83.42  Aligned_cols=36  Identities=39%  Similarity=0.750  Sum_probs=31.4

Q ss_pred             chhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         360 QSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       360 ~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +.|++.|+.|||+.+||||||||+|||++.+..++|
T Consensus       129 MrqlfegVeylHa~~IVHRDLKpENILlddn~~i~i  164 (411)
T KOG0599|consen  129 MRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKI  164 (411)
T ss_pred             HHHHHHHHHHHHHhhhhhcccChhheeeccccceEE
Confidence            334499999999999999999999999999877664

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.34  E-value=1.2e-07  Score=95.39  Aligned_cols=46  Identities=15%  Similarity=0.160  Sum_probs=42.7

Q ss_pred             chhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865          87 PFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus        87 ~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      ..++.+++.++.+||+.|++||||||.|||+ .++.++|+|||+|+.
T Consensus       431 ~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        431 PELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             HHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            4578999999999999999999999999999 678899999999986

>KOG0665|consensus

Probab=98.34  E-value=1.7e-07  Score=84.05  Aligned_cols=43  Identities=42%  Similarity=0.577  Sum_probs=38.2

Q ss_pred             CCcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         353 VPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       353 ~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +-.+..+..|.++|+.|+|+.||+||||||+||+|...+.+||
T Consensus       117 H~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi  159 (369)
T KOG0665|consen  117 HETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKI  159 (369)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheee
Confidence            3445667788999999999999999999999999999999886

>KOG0610|consensus

Probab=98.31  E-value=1e-07  Score=88.14  Aligned_cols=38  Identities=32%  Similarity=0.478  Sum_probs=33.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCIL  393 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~  393 (395)
                      +..+++.++.+|.|||..|||.|||||+||||-++|.+
T Consensus       181 aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHI  218 (459)
T KOG0610|consen  181 ARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHI  218 (459)
T ss_pred             HHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcE
Confidence            44466777999999999999999999999999999875

>KOG0575|consensus

Probab=98.28  E-value=1.7e-07  Score=90.73  Aligned_cols=44  Identities=41%  Similarity=0.538  Sum_probs=38.3

Q ss_pred             CCCcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       352 ~~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .+|-+..++.||+.|+.|||+++|||||||..|+||+++..+||
T Consensus       116 tEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKI  159 (592)
T KOG0575|consen  116 TEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKI  159 (592)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEe
Confidence            34445557789999999999999999999999999999988886

>KOG0666|consensus

Probab=98.24  E-value=2.6e-07  Score=82.58  Aligned_cols=40  Identities=35%  Similarity=0.530  Sum_probs=34.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCC----CcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN----CILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~----~~~k~  395 (395)
                      ..++..||+.|+.|||+..|+||||||.||||..+    |.+||
T Consensus       134 vKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKI  177 (438)
T KOG0666|consen  134 VKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKI  177 (438)
T ss_pred             HHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEe
Confidence            34455567999999999999999999999999988    77775

>KOG0580|consensus

Probab=98.22  E-value=3.5e-07  Score=78.86  Aligned_cols=45  Identities=36%  Similarity=0.404  Sum_probs=39.0

Q ss_pred             CCCCcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         351 SRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       351 ~~~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ...+....++.|++.++.|||..+|||||+||+|+|++.+|.+|+
T Consensus       121 f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lki  165 (281)
T KOG0580|consen  121 FDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKI  165 (281)
T ss_pred             ccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeec
Confidence            344455667788899999999999999999999999999999885

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.22  E-value=1.1e-06  Score=81.96  Aligned_cols=106  Identities=10%  Similarity=0.046  Sum_probs=83.8

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh--
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM--  158 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~--  158 (395)
                      +.+.-....++.++.+.+.||..|.+-+|+.++|+|+++++.|.|+|-..-... . ........+|...|.+||.-.  
T Consensus       114 ~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~-~-ng~~~~cpVg~~eftPPElQ~~~  191 (637)
T COG4248         114 CAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN-A-NGTLHLCPVGVSEFTPPELQTLP  191 (637)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeec-c-CCceEecccCccccCCHHHhccc
Confidence            345666778899999999999999999999999999999999999875432221 1 223445568999999999753  


Q ss_pred             ---cCCCCCccchHHhHHHHHHHHHcC-CCCCCCC
Q psy2865         159 ---GARHYSAAVDVWSVGCIFAELLGR-RILFQAQ  189 (395)
Q Consensus       159 ---~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~  189 (395)
                         |.. -+...|.|.||+++|+|+.| +.||.|.
T Consensus       192 sf~g~~-r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         192 SFVGFE-RTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             cccccC-CCccccchhHHHHHHHHHhcCCCCCCcc
Confidence               332 46678999999999999855 9999874

>KOG0614|consensus

Probab=98.18  E-value=6.4e-07  Score=84.98  Aligned_cols=44  Identities=30%  Similarity=0.424  Sum_probs=38.9

Q ss_pred             CCCcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         352 RVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       352 ~~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++...++.+++.++.|||++|||.|||||+|++|+++|-+|+
T Consensus       518 dd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KL  561 (732)
T KOG0614|consen  518 DDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKL  561 (732)
T ss_pred             ccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEE
Confidence            34456678889999999999999999999999999999998875

>KOG0192|consensus

Probab=98.18  E-value=4.1e-07  Score=86.06  Aligned_cols=41  Identities=34%  Similarity=0.545  Sum_probs=36.7

Q ss_pred             cccCcchhhhhcccccccCc-eEecCCCCCCeeecCCC-cccC
Q psy2865         355 LCINPQSAAFKSLKYLHSAR-ILHRDIKPGNLLVNSNC-ILKW  395 (395)
Q Consensus       355 ~~~~~~~qi~~gl~y~h~~~-~~hr~~~~~n~~~~~~~-~~k~  395 (395)
                      .++.++.+|+.||.|||+.+ ||||||||+|+||+..+ .+||
T Consensus       143 ~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI  185 (362)
T KOG0192|consen  143 VRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKI  185 (362)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEE
Confidence            45677888999999999999 99999999999999997 7775

>KOG0193|consensus

Probab=98.17  E-value=3.1e-07  Score=88.87  Aligned_cols=40  Identities=28%  Similarity=0.554  Sum_probs=36.2

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.++.||+.|+.|||+++|||||||.-||+|++++.+||
T Consensus       490 ~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkI  529 (678)
T KOG0193|consen  490 TIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKI  529 (678)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEE
Confidence            4557779999999999999999999999999999888875

>KOG0582|consensus

Probab=98.16  E-value=3.9e-07  Score=85.14  Aligned_cols=43  Identities=33%  Similarity=0.538  Sum_probs=36.7

Q ss_pred             CCcccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         353 VPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       353 ~p~~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .+.+..+..+++.||.|||.+|.||||+|+.||||+.+|.+|+
T Consensus       125 E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkL  167 (516)
T KOG0582|consen  125 EASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKL  167 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEE
Confidence            3344455566799999999999999999999999999999885

>KOG0591|consensus

Probab=98.16  E-value=6.9e-07  Score=78.88  Aligned_cols=54  Identities=28%  Similarity=0.378  Sum_probs=44.4

Q ss_pred             HHHHhhhcCCCCCcccCcchhhhhccccccc--Cc--eEecCCCCCCeeecCCCcccC
Q psy2865         342 KFIAEQLNTSRVPLCINPQSAAFKSLKYLHS--AR--ILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       342 ~~I~~~~~~~~~p~~~~~~~qi~~gl~y~h~--~~--~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +.+..+......+++..+..|++.+|.+||+  .+  |+||||||.||+|+.+|++|+
T Consensus       112 k~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL  169 (375)
T KOG0591|consen  112 KHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL  169 (375)
T ss_pred             HHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence            3344445555666777888899999999999  55  999999999999999999985

>KOG0668|consensus

Probab=98.13  E-value=5.7e-07  Score=77.14  Aligned_cols=31  Identities=39%  Similarity=0.728  Sum_probs=28.5

Q ss_pred             chhhhhcccccccCceEecCCCCCCeeecCC
Q psy2865         360 QSAAFKSLKYLHSARILHRDIKPGNLLVNSN  390 (395)
Q Consensus       360 ~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~  390 (395)
                      ..+++.+|.||||+||+|||+||.|++|++.
T Consensus       138 ~~elLkALdyCHS~GImHRDVKPhNvmIdh~  168 (338)
T KOG0668|consen  138 IYELLKALDYCHSMGIMHRDVKPHNVMIDHE  168 (338)
T ss_pred             HHHHHHHHhHHHhcCcccccCCcceeeechh
Confidence            3667899999999999999999999999986

>KOG0605|consensus

Probab=98.11  E-value=1.2e-06  Score=83.66  Aligned_cols=36  Identities=31%  Similarity=0.559  Sum_probs=32.4

Q ss_pred             chhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         360 QSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       360 ~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +++.+.++..+|..|+|||||||+|+|||..|.+|+
T Consensus       247 iaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKL  282 (550)
T KOG0605|consen  247 IAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKL  282 (550)
T ss_pred             HHHHHHHHHHHHHcCcccccCChhheeecCCCCEee
Confidence            344488999999999999999999999999999885

>KOG0595|consensus

Probab=98.11  E-value=7.7e-07  Score=82.34  Aligned_cols=35  Identities=31%  Similarity=0.601  Sum_probs=30.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN  390 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~  390 (395)
                      +..++.|++.|+.+||+++||||||||+||||+..
T Consensus       111 ~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~  145 (429)
T KOG0595|consen  111 ARHFMQQLASALQFLHENNIIHRDLKPQNILLSTT  145 (429)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence            44456677999999999999999999999999875

>KOG0986|consensus

Probab=98.09  E-value=8.4e-07  Score=83.13  Aligned_cols=40  Identities=28%  Similarity=0.402  Sum_probs=36.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .+.++++|++||.+||..+||.|||||+|||||+.|.+.|
T Consensus       289 a~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRI  328 (591)
T KOG0986|consen  289 ARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRI  328 (591)
T ss_pred             HHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEe
Confidence            4558889999999999999999999999999999998765

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.09  E-value=6.4e-07  Score=73.64  Aligned_cols=47  Identities=6%  Similarity=-0.137  Sum_probs=41.3

Q ss_pred             chhhHHhhcCCCCcccc---CccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865          87 PFKLSEISATRPDSTID---GYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus        87 ~~~~~qi~~~l~~lH~~---~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      ..++.+++.++.++|..   +++|+|++|.||+++..+.++++|||+++.
T Consensus        89 ~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          89 EDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            44677888888888884   799999999999999989999999999875

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.09  E-value=7e-07  Score=76.88  Aligned_cols=49  Identities=2%  Similarity=-0.122  Sum_probs=42.1

Q ss_pred             CCchhhHHhhcCCCCc-cccCccccCCCCCceeecCCCCeEEeeCCccccc
Q psy2865          85 RKPFKLSEISATRPDS-TIDGYQARQPTRQLVMYQATYSSKICDFGLARVE  134 (395)
Q Consensus        85 ~~~~~~~qi~~~l~~l-H~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~  134 (395)
                      ....++.+++.++..+ |..||||+||++.|||+. ++.+.|+|||.|...
T Consensus       125 ~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         125 EMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            3445678999999988 899999999999999997 467999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0588|consensus

Probab=98.08  E-value=5.7e-07  Score=87.94  Aligned_cols=40  Identities=30%  Similarity=0.463  Sum_probs=35.2

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++..||+.|+.|||+.+|+||||||+|+||++.+-+||
T Consensus       114 aa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKI  153 (786)
T KOG0588|consen  114 AAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKI  153 (786)
T ss_pred             HHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEee
Confidence            3445578899999999999999999999999999877876

>KOG0033|consensus

Probab=98.08  E-value=8.1e-07  Score=76.94  Aligned_cols=35  Identities=40%  Similarity=0.624  Sum_probs=31.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN  390 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~  390 (395)
                      ..+++.||+.++.|||.+||||||+||+|+||...
T Consensus       112 aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK  146 (355)
T KOG0033|consen  112 ASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK  146 (355)
T ss_pred             HHHHHHHHHHHHHHHHhcCceeccCChhheeeeec
Confidence            45678899999999999999999999999999753

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.07  E-value=7.4e-07  Score=82.63  Aligned_cols=40  Identities=33%  Similarity=0.436  Sum_probs=34.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.+|+||||||+||||+.++.++|
T Consensus       128 ~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l  167 (294)
T PHA02882        128 IKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYI  167 (294)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEE
Confidence            4456778899999999999999999999999998776653

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.07  E-value=1e-06  Score=83.35  Aligned_cols=37  Identities=24%  Similarity=0.471  Sum_probs=33.0

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.++.+||
T Consensus       179 ~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl  215 (338)
T cd05102         179 YSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKI  215 (338)
T ss_pred             HHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEE
Confidence            4467799999999999999999999999998887764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.06  E-value=8.3e-07  Score=84.96  Aligned_cols=39  Identities=31%  Similarity=0.445  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       104 ~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL  142 (363)
T cd05628         104 QFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKL  142 (363)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEE
Confidence            345567799999999999999999999999999988764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.06  E-value=6.8e-07  Score=82.59  Aligned_cols=39  Identities=41%  Similarity=0.576  Sum_probs=34.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||++||+||||||+|||++.+|.+||
T Consensus       106 ~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl  144 (288)
T cd07871         106 KIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKL  144 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEE
Confidence            445678899999999999999999999999999887764

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0611|consensus

Probab=98.05  E-value=9.5e-07  Score=81.68  Aligned_cols=38  Identities=29%  Similarity=0.488  Sum_probs=34.3

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++..||+.++.|||.++++|||||.+|||||.+|.+||
T Consensus       157 hfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKI  194 (668)
T KOG0611|consen  157 HFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKI  194 (668)
T ss_pred             HHHHHHHHHHHHHhhccceecccchhheeecCCCCeee
Confidence            34567799999999999999999999999999998876

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.05  E-value=9.3e-07  Score=83.15  Aligned_cols=37  Identities=30%  Similarity=0.474  Sum_probs=33.3

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       100 ~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl  136 (323)
T cd05571         100 YGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKI  136 (323)
T ss_pred             HHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEE
Confidence            4567799999999999999999999999999988764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.04  E-value=1e-06  Score=85.18  Aligned_cols=39  Identities=31%  Similarity=0.606  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       185 ~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL  223 (391)
T PHA03212        185 LAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCL  223 (391)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEE
Confidence            445678899999999999999999999999999887764

>KOG0608|consensus

Probab=98.03  E-value=3.3e-06  Score=82.33  Aligned_cols=39  Identities=26%  Similarity=0.402  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..+.+.+.+++.+.|..|+|||||||.|||||.+|.+|+
T Consensus       732 RFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKL  770 (1034)
T KOG0608|consen  732 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKL  770 (1034)
T ss_pred             HHHHHHHHHHHHHHHhccceecccCccceEEccCCceee
Confidence            334556689999999999999999999999999999885

>KOG0984|consensus

Probab=98.03  E-value=1.5e-06  Score=73.57  Aligned_cols=43  Identities=30%  Similarity=0.526  Sum_probs=35.8

Q ss_pred             CCcccCcchhhhhcccccccC-ceEecCCCCCCeeecCCCcccC
Q psy2865         353 VPLCINPQSAAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       353 ~p~~~~~~~qi~~gl~y~h~~-~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +.++=.++-.+..++.|||++ .+||||+||+||||+..|.+|+
T Consensus       147 E~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKi  190 (282)
T KOG0984|consen  147 EDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKI  190 (282)
T ss_pred             hHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEE
Confidence            334445666778999999974 9999999999999999998875

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.03  E-value=1e-06  Score=83.04  Aligned_cols=39  Identities=26%  Similarity=0.334  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.++|
T Consensus        99 ~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl  137 (330)
T cd05586          99 KFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIAL  137 (330)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEE
Confidence            345567899999999999999999999999999887764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.02  E-value=9.4e-07  Score=82.24  Aligned_cols=39  Identities=38%  Similarity=0.543  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       106 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl  144 (303)
T cd07869         106 KLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKL  144 (303)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEE
Confidence            345567899999999999999999999999999888764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.01  E-value=1.2e-06  Score=82.69  Aligned_cols=37  Identities=32%  Similarity=0.523  Sum_probs=33.2

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       100 ~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL  136 (328)
T cd05593         100 YGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKI  136 (328)
T ss_pred             HHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEE
Confidence            4567799999999999999999999999999887764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.00  E-value=1.2e-06  Score=82.40  Aligned_cols=37  Identities=35%  Similarity=0.518  Sum_probs=33.4

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       101 ~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl  137 (325)
T cd05602         101 YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVL  137 (325)
T ss_pred             HHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEE
Confidence            4567899999999999999999999999999887764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.00  E-value=1.2e-06  Score=84.01  Aligned_cols=38  Identities=32%  Similarity=0.517  Sum_probs=33.9

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       146 ~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL  183 (370)
T cd05621         146 FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKL  183 (370)
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEE
Confidence            34567799999999999999999999999999988774

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=97.99  E-value=1.4e-06  Score=81.88  Aligned_cols=38  Identities=32%  Similarity=0.455  Sum_probs=33.9

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus        99 ~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL  136 (323)
T cd05595          99 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI  136 (323)
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEe
Confidence            34567799999999999999999999999999988764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=97.99  E-value=1.4e-06  Score=81.71  Aligned_cols=37  Identities=27%  Similarity=0.436  Sum_probs=33.4

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||++||+||||||+||||+.+|.++|
T Consensus       101 ~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl  137 (316)
T cd05620         101 YAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKI  137 (316)
T ss_pred             HHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEe
Confidence            4567899999999999999999999999999887764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=97.98  E-value=1.7e-06  Score=81.12  Aligned_cols=39  Identities=31%  Similarity=0.457  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.++.+||
T Consensus       112 ~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl  150 (316)
T cd05108         112 LNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKI  150 (316)
T ss_pred             HHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEE
Confidence            345568899999999999999999999999999887664

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=97.98  E-value=2.3e-06  Score=80.48  Aligned_cols=38  Identities=29%  Similarity=0.446  Sum_probs=33.3

Q ss_pred             Ccchhhhhccccccc-CceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHS-ARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~-~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+ .||+||||||+||||+.+|.+||
T Consensus        99 ~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL  137 (325)
T cd05594          99 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKI  137 (325)
T ss_pred             HHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEE
Confidence            345677999999997 79999999999999999988764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.98  E-value=1.5e-06  Score=83.61  Aligned_cols=37  Identities=27%  Similarity=0.500  Sum_probs=33.2

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.||.|||+.||+||||||+||||+.+|.+|+
T Consensus       106 ~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl  142 (377)
T cd05629         106 YMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKL  142 (377)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEE
Confidence            4567799999999999999999999999999887764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.98  E-value=1.8e-06  Score=91.14  Aligned_cols=37  Identities=16%  Similarity=0.306  Sum_probs=32.2

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      +..++.||+.||.|||++||+||||||+||||+..|.
T Consensus        82 ~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~  118 (793)
T PLN00181         82 CFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNH  118 (793)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCc
Confidence            4567788999999999999999999999999965443

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=97.97  E-value=1.4e-06  Score=84.01  Aligned_cols=38  Identities=26%  Similarity=0.425  Sum_probs=33.8

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       105 ~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL  142 (382)
T cd05625         105 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKL  142 (382)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence            34567799999999999999999999999999988764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PHA03210 serine/threonine kinase US3; Provisional

Probab=97.97  E-value=1.4e-06  Score=87.00  Aligned_cols=38  Identities=24%  Similarity=0.487  Sum_probs=34.1

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       271 ~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL  308 (501)
T PHA03210        271 AIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVL  308 (501)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence            35668899999999999999999999999999988764

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=97.97  E-value=1.5e-06  Score=81.76  Aligned_cols=39  Identities=26%  Similarity=0.359  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       104 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL  142 (324)
T cd05587         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKI  142 (324)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEE
Confidence            335567899999999999999999999999999887764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	395
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		9e-28
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-04
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-27
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-04
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-27
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-04
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-27
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-04
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-27
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-27
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-27
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-05
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		5e-27
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-05
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		5e-27
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		1e-05
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		5e-27
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		1e-05
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		5e-27
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		1e-05
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		5e-27
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		1e-05
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		5e-27
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-05
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		5e-27
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		5e-27
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-05
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		5e-27
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		5e-27
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-05
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		5e-27
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-05
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		6e-27
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		4e-06
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		8e-27
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		1e-05
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-27
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-05
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-26
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-04
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-26
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-26
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-05
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-24
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-24
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		6e-24
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		7e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-24
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		8e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		9e-24
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		8e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-23
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		8e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-23
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-23
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		8e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-23
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		8e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-23
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		8e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-23
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		8e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-23
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-23
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		7e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-23
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-23
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		8e-04
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-23
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		7e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-23
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		7e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-23
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-23
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-23
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		4e-23
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		8e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		4e-23
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		8e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		4e-23
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		8e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		4e-23
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		8e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-23
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		4e-23
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		4e-23
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		8e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-23
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-23
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-23
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-23
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-23
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		8e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-23
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		4e-23
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		4e-23
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		9e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		4e-23
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		8e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-23
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		4e-23
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		8e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		4e-23
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		8e-04
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		5e-23
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-05
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-22
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		4e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-22
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-22
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-04
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		3e-22
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		3e-04
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-22
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-04
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		3e-22
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		3e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		3e-22
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-04
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-22
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		3e-22
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		3e-04
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-22
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-22
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-22
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		3e-22
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-04
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-22
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-22
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-22
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-22
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-22
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-22
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-22
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-22
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-22
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-22
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-22
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-22
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-22
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-22
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-22
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-22
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		3e-22
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		4e-22
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		4e-22
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		4e-22
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		4e-22
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		4e-22
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		4e-22
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		4e-22
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		4e-22
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		4e-22
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		4e-22
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		3e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		4e-22
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		4e-22
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		4e-22
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		4e-22
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		3e-05
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		5e-22
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		7e-22
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		8e-22
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		8e-22
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-22
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-21
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		1e-21
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-21
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		1e-21
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		1e-21
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-21
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-04
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-21
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-21
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-21
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-21
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-21
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-21
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-21
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-05
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-21
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-21
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-21
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-21
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		3e-21
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		4e-21
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-21
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		4e-21
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		8e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		4e-21
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		8e-05
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		4e-21
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		4e-21
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-05
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		4e-21
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-21
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-05
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-21
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		2e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-21
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-05
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		6e-21
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-04
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		6e-21
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-04
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		6e-21
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-04
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		6e-21
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-04
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		6e-21
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-04
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		6e-21
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-04
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		6e-21
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-04
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		7e-21
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-04
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		7e-21
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		7e-21
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		7e-21
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-20
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-20
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-04
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-20
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-20
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-20
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-20
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-20
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-20
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-04
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-20
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-20
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-20
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-20
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-20
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-20
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		5e-20
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		5e-20
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		5e-20
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-04
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		7e-20
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-19
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-19
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-19
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-19
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-19
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-19
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		3e-19
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		9e-04
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		4e-19
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		4e-19
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		5e-19
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		8e-19
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-18
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-18
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-18
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-18
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-18
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		3e-18
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		3e-18
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-18
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-18
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-18
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		4e-18
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-18
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		4e-18
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		4e-18
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-18
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		4e-18
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		4e-18
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-18
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		5e-18
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		5e-18
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		5e-18
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		5e-18
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		5e-18
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		5e-18
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		6e-18
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		1e-17
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		4e-17
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		4e-17
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		5e-17
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		5e-17
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		6e-17
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		3e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		6e-17
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		4e-04
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		7e-17
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		8e-17
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		8e-17
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-13
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		1e-11
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		1e-11
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		1e-11
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		1e-11
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		1e-11
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		1e-11
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-11
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-11
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		2e-11
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		2e-11
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		3e-11
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		3e-11
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		3e-11
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		3e-11
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		3e-11
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		3e-11
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		3e-11
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		3e-11
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		3e-11
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		3e-11
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		3e-11
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		3e-11
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		3e-11
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		4e-11
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		4e-11
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		4e-11
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		4e-11
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-10
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-10
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-10
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		1e-09
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-09
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-09
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		3e-09
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		3e-09
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		3e-09
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		4e-09
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		4e-09
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		4e-09
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		2e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		3e-06
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		6e-06
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-06
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		7e-06
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-06
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-05
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-05
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-05
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-05
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		5e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		5e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		5e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		5e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		5e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		5e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		5e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		6e-05
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		7e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-05
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		7e-05
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		8e-05
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-04
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-04
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-04
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		1e-04
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-04
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-04
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-04
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		2e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-04
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-04
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-04
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-04
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		3e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		3e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		3e-04
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		4e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		4e-04
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		4e-04
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		4e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-04
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		4e-04
2oza_A	356	Structure Of P38alpha Complex Length = 356		4e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-04
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		4e-04
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		4e-04
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		4e-04
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		4e-04
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		4e-04
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-04
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		4e-04
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		5e-04
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		5e-04
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		5e-04
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		6e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		6e-04
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		6e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		6e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		6e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		6e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		6e-04
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		7e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		7e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		7e-04
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		7e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		7e-04
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		8e-04
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		8e-04
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		8e-04
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		8e-04
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		9e-04

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score =  121 bits (303), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+   LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 164

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+   LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 164

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+   LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 168

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+   LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 168

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 175 LLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 235 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 292
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 293 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+   LK
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 184

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 157 LLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 217 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHK--NK 274
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                    A  +A+ LL +ML F+P KRI V  AL HPYL
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+   LK
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTSDLK 166

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 157 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 217 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 274
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 166

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 160 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 219
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 220 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 277
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 278 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 169

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 161 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 220
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 221 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 278
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 279 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 170

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 152 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 211
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 212 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 269
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 270 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 161

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 153 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 212
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 213 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 270
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 271 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 162

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 164

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 163 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 222
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 223 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 280
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 281 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 172

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 164

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 175 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 235 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 292
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 293 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 184

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Query: 115 VMYQATYSSKICDFGLARVEEP--DPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLAR+ +P  D    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 175 LLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXX 232
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++ +     K     Q+       
Sbjct: 235 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIINMKARNYLQSLPSKTKV 293
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                   +  +A+ LL +ML F+P KRI+V  AL HPYL++
Sbjct: 294 AWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLINTTCDLK 184

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 153 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 212
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P  E++    +  A+ ++L    K    
Sbjct: 213 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHK--NK 270
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 271 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 162

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 157 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 217 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 274
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                    A  +A+ LL +ML F+P KRI V  AL HPYL
Sbjct: 275 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 166

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KI DFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 155 LLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 215 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHK--NK 272
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 273 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+   LK
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLK 164

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    + + V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 159 LLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 219 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 276
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    + + V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 160 LLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSV 219
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXX 231
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +  A+ ++L    K    
Sbjct: 220 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK--NK 277
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    A  +A+ LL +ML F+P KRI V  AL HPYL++
Sbjct: 278 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 169

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           Q ++  +  + K+ DFGLAR     P ++ T EVVT +YRAP++LMG++ YS +VD+WS+
Sbjct: 148 QNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ-TRKXXXX 231
           GCIFAE++  + LF   +   QL  I  +LGTP P E        +  + +Q T +    
Sbjct: 207 GCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV---QELPLWKQRTFQVFEK 263
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                       E + LL  ML FDP KRIS   A+ HPY  +
Sbjct: 264 KPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           Q ++  +  + K+ DFGLAR     P ++ T EVVT +YRAP++LMG++ YS +VD+WS+
Sbjct: 148 QNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ-TRKXXXX 231
           GCIFAE++  + LF   +   QL  I  +LGTP P E        +  + +Q T +    
Sbjct: 207 GCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV---QELPLWKQRTFQVFEK 263
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                       E + LL  ML FDP KRIS   A+ HPY  +
Sbjct: 264 KPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 150 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 209 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 267
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 268 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 296

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 81  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 141 LLINTEGAIK 150

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 73  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 133 LLINTEGAIK 142

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 75  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 135 LLINTEGAIK 144

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 147 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 206 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 264
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 265 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 293

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 78  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 138 LLINTEGAIK 147

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 73  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 133 LLINTEGAIK 142

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 73  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 133 LLINTEGAIK 142

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 150 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 209 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 267
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 268 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 296

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 81  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 141 LLINTEGAIK 150

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 327 ERKLTSV-QQVKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + V +++  F+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 73  ENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 133 LLINTEGAIK 142

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 124 KICDFGLARVEEPDPNKA---MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFG+AR     P +    MT+ V T++YRAPE+++    Y+ A+D+WSVGCIF E+L
Sbjct: 199 KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 258
Query: 181 GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXX 240
            RR LF  ++ V QL LI  +LGTP+P  ++ A    +     Q+               
Sbjct: 259 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ-AVGAERVRAYIQSLPPRQPVPWETVYPG 317
Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXX 300
           A  +A+ LL +ML F+P+ RIS  +AL HP+L     ++H                    
Sbjct: 318 ADRQALSLLGRMLRFEPSARISAAAALRHPFL----AKYHDP------------------ 355
Query: 301 XXXXXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEM 340
                       D EP    PFD  ++R+  + +++KE +
Sbjct: 356 ------------DDEPDCAPPFDFAFDREALTRERIKEAI 383

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA+++HRD+KP NLLVN NC LK
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLVNENCELK 199

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 124 KICDFGLARVEEPDPNKA---MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFG+AR     P +    MT+ V T++YRAPE+++    Y+ A+D+WSVGCIF E+L
Sbjct: 198 KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
Query: 181 GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXX 240
            RR LF  ++ V QL LI  +LGTP+P  ++ A    +     Q+               
Sbjct: 258 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ-AVGAERVRAYIQSLPPRQPVPWETVYPG 316
Query: 241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXX 300
           A  +A+ LL +ML F+P+ RIS  +AL HP+L     ++H                    
Sbjct: 317 ADRQALSLLGRMLRFEPSARISAAAALRHPFL----AKYHDP------------------ 354
Query: 301 XXXXXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEM 340
                       D EP    PFD  ++R+  + +++KE +
Sbjct: 355 ------------DDEPDCAPPFDFAFDREALTRERIKEAI 382

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA+++HRD+KP NLLVN NC LK
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLVNENCELK 198

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 145 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 263 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 76  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 135
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 136 LLINTEGAIK 145

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 145 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 263 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 76  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 136 LLINTEGAIK 145

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 77  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 137 LLINTEGAIK 146

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 73  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 133 LLINTEGAIK 142

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 77  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 137 LLINTEGAIK 146

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 145 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 263 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 76  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 136 LLINTEGAIK 145

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 142 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 260 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 73  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 133 LLINTEGAIK 142

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 75  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 134
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 135 LLINTEGAIK 144

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSV-QQVKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + V +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 77  ENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 137 LLINTEGAIK 146

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 75  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 135 LLINTEGAIK 144

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 146 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 263
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 264 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 143 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 261 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 74  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 134 LLINTEGAIK 143

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 145 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 263 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 147 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 206 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 264
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 265 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 293

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 78  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 138 LLINTEGAIK 147

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P +    EVVT +YRAPEIL+G ++YS AVD+WS+GCIFAE++ RR
Sbjct: 144 KLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I   LGTP  E +         +     +                G
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            +  LL QML++DP KRIS  +AL HP+  +
Sbjct: 262 RS--LLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 327 ERKLTSVQQ-VKEEMHKFI-AEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGN 384
           E KL  V + + +++ KF+ A  L    +PL  +      + L + HS R+LHRD+KP N
Sbjct: 75  ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 385 LLVNSNCILK 394
           LL+N+   +K
Sbjct: 135 LLINTEGAIK 144

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++ A HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 124 KICDFGLARV--------EEPDPNKA-MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           K+CDFGLAR+         EP   ++ MT+ V T++YRAPE+++ +  YS A+DVWS GC
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           I AEL  RR +F  +    QL LI  ++GTP  +      +  +     ++         
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                    + + LL +ML FDP KRI+   AL HPYL
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 314 FEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQ-LNTSRVPLCINPQSAAFKSLKYLHS 372
           F    P  F++  E  +   + ++ ++H+ I+ Q L+   +   I       +++K LH 
Sbjct: 75  FNIQRPDSFENFNEVYIIQ-ELMQTDLHRVISTQMLSDDHIQYFI---YQTLRAVKVLHG 130
Query: 373 ARILHRDIKPGNLLVNSNCILK 394
           + ++HRD+KP NLL+NSNC LK
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLK 152

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 170 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 283
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +  LK
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXELK 170

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 170 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 283
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +  LK
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDXELK 170

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +  LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDXELK 165

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 124 KICDFGLARV--------EEPDPNKA-MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           K+CDFGLAR+         EP   ++ MT+ V T++YRAPE+++ +  YS A+DVWS GC
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           I AEL  RR +F  +    QL LI  ++GTP  +      +  +     ++         
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                    + + LL +ML FDP KRI+   AL HPYL
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 314 FEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQ-LNTSRVPLCINPQSAAFKSLKYLHS 372
           F    P  F++  E  +   + ++ ++H+ I+ Q L+   +   I       +++K LH 
Sbjct: 75  FNIQRPDSFENFNEVYIIQ-ELMQTDLHRVISTQMLSDDHIQYFI---YQTLRAVKVLHG 130
Query: 373 ARILHRDIKPGNLLVNSNCILK 394
           + ++HRD+KP NLL+NSNC LK
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLK 152

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 167 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 280
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +  LK
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDSELK 167

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 176 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 232 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 289
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 290 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +  LK
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDXELK 176

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 177 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 290
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 167 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 280
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 177 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 290
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 171 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +  LK
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDSELK 171

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 176 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 232 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 289
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 290 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 176

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 177 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 233 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 290
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 177

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 167 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 280
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 170 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 283
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 170

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 171 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 164 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 220 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 277
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 278 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 307

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 134 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 164

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 170 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 226 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 283
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 170

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 175 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 231 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 288
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 289 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 318

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 175

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 172 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 285
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 161 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 274
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 167 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 223 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 280
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 167

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 162 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 218 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 275
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 276 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 162

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 188 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 244 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 301
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 302 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 188

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 171 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 185 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 298
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 162 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 218 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 275
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 276 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 162

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 184 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 297
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 298 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 163 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 219 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 276
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 277 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 306

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 133 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 163

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 161 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 274
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 185 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 298
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 171 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 227 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 184 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 240 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 297
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 298 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 161 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 274
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Query: 113 QLVMYQATYSSKICDFGLARVEEP-DPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWS 171
            +++ +A  + K+CDFG A+   P +PN A    + ++YYRAPE++ G +HY+ AVD+WS
Sbjct: 161 NVLVNEADGTLKLCDFGSAKKLSPSEPNVAY---ICSRYYRAPELIFGNQHYTTAVDIWS 217
Query: 172 VGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXX 231
           VGCIFAE++    +F+  +   QL  I  +LG P+ E +R          L  ++     
Sbjct: 218 VGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWS 277
Query: 232 XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                       EA  LL  +L + P +R+    ALCHPY DE
Sbjct: 278 NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR         MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 172 KILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 285
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR         MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 172 KILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 285
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR         MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 172 KILDFGLAR----HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 285
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 172

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D+GLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDYGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 124 KICDFGLARV--------EEPDPNKA-MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           K+CDFGLAR+         EP   ++ M + V T++YRAPE+++ +  YS A+DVWS GC
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           I AEL  RR +F  +    QL LI  ++GTP  +      +  +     ++         
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                    + + LL +ML FDP KRI+   AL HPYL
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 314 FEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQ-LNTSRVPLCINPQSAAFKSLKYLHS 372
           F    P  F++  E  +   + ++ ++H+ I+ Q L+   +   I       +++K LH 
Sbjct: 75  FNIQRPDSFENFNEVYIIQ-ELMQTDLHRVISTQMLSDDHIQYFI---YQTLRAVKVLHG 130
Query: 373 ARILHRDIKPGNLLVNSNCILK 394
           + ++HRD+KP NLL+NSNC LK
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLK 152

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRI 184
           ICDF LAR +  D NK  T  V  ++YRAPE++M  + ++  VD+WS GC+ AE+  R+ 
Sbjct: 175 ICDFNLAREDTADANK--THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
Query: 185 LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATGE 244
           LF+  +   QL  I +++GTP  E++      +    LR +               A   
Sbjct: 233 LFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV 292
Query: 245 AVHLLVQMLYFDPTKRISVNSALCHPYLD 273
           A+ L+ +ML F+P +RIS   AL HPY +
Sbjct: 293 ALDLIAKMLEFNPQRRISTEQALRHPYFE 321

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M   V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 185 KILDFGLAR----HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 241 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 298
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M   V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 188 KILDFGLAR----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 244 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 301
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 302 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 188

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRI 184
           ICDF LAR +  D NK  T  V  ++YRAPE++M  + ++  VD+WS GC+ AE+  R+ 
Sbjct: 175 ICDFNLAREDTADANK--THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
Query: 185 LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATGE 244
           LF+  +   QL  I +++GTP  E++      +    LR +               A   
Sbjct: 233 LFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV 292
Query: 245 AVHLLVQMLYFDPTKRISVNSALCHPYLD 273
           A+ L+ +ML F+P +RIS   AL HPY +
Sbjct: 293 ALDLIAKMLEFNPQRRISTEQALRHPYFE 321

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL R      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLCR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +  LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDSELK 165

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           Q ++  ++   K+ DFGLAR+       A+T  VVT +YRAPE+L+ +  Y+  VD+WSV
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSV 205
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXX 232
           GCIFAE+  R+ LF+  S V QLG I D++G P  E+           + RQ        
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-----DVALPRQAFHSKSAQ 260
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                          LL++ L F+P KRIS  SAL HPY  +
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M   V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M   V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           Q ++  ++   K+ DFGLAR+       A+T  VVT +YRAPE+L+ +  Y+  VD+WSV
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSV 205
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXX 232
           GCIFAE+  R+ LF+  S V QLG I D++G P  E+           + RQ        
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-----DVALPRQAFHSKSAQ 260
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                          LL++ L F+P KRIS  SAL HPY  +
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M   V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 161 KILDFGLAR----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLAQMPKMNFANVFIGAN 274
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 113 QLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           Q ++  ++   K+ DFGLAR+       A+T  VVT +YRAPE+L+ +  Y+  VD+WSV
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSV 205
Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXX 232
           GCIFAE+  R+ LF+  S V QLG I D++G P  E+           + RQ        
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-----DVALPRQAFHSKSAQ 260
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                          LL++ L F+P KRIS  SAL HPY 
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI  FGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILGFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++ ++  + KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGC
Sbjct: 157 IVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 213
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           I  E++  +ILF  +  + Q   + + LGTP PE M+      + ++  + +        
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                    ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++ ++  + KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGC
Sbjct: 150 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 206
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           I  E++  +ILF  +  + Q   + + LGTP PE M+      + ++  + +        
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                    ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++ ++  + KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGC
Sbjct: 157 IVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 213
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           I  E++  +ILF  +  + Q   + + LGTP PE M+      + ++  + +        
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                    ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT++YRAPE+++   HY+  VD+WSVGCI AE+L  +
Sbjct: 166 KILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF+ +  + QL  I  + G P  E ++   D  AK ++  Q+               A+
Sbjct: 222 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI--QSLPQTPRKDFTQLFPRAS 279
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXX 302
            +A  LL +ML  D  KR++   AL HP+ +  R                          
Sbjct: 280 PQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR-------------------------- 313
Query: 303 XXXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIA 345
                     + E  A QPFDD+ E +  +V + K+ ++K I 
Sbjct: 314 --------DPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIV 348

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            K LKY+HSA ++HRD+KPGNL VN +C LK
Sbjct: 136 LKGLKYIHSAGVVHRDLKPGNLAVNEDCELK 166

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT++YRAPE+++   HY+  VD+WSVGCI AE+L  +
Sbjct: 184 KILDFGLAR----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF+ +  + QL  I  + G P  E ++   D  AK ++  Q+               A+
Sbjct: 240 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI--QSLPQTPRKDFTQLFPRAS 297
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYXXXXXXXXXXXXXX 302
            +A  LL +ML  D  KR++   AL HP+ +  R                          
Sbjct: 298 PQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR-------------------------- 331
Query: 303 XXXXXRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIA 345
                     + E  A QPFDD+ E +  +V + K+ ++K I 
Sbjct: 332 --------DPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIV 366

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            K LKY+HSA ++HRD+KPGNL VN +C LK
Sbjct: 154 LKGLKYIHSAGVVHRDLKPGNLAVNEDCELK 184

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++ ++  + KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGC
Sbjct: 157 IVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 213
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           I  E++  +ILF  +  + Q   + + LGTP PE M+      + ++  + +        
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                    ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D GLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDAGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I DFGLAR      ++ MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  +
Sbjct: 171 RILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL  I +++GTP+PE + + + + A+ ++  Q+               A 
Sbjct: 227 ALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             A+ LL +ML  D  +R+S   AL H Y  +
Sbjct: 285 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP N+ VN +  L+
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELR 171

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I DFGLAR      ++ MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  +
Sbjct: 163 RILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL  I +++GTP+PE + + + + A+ ++  Q+               A 
Sbjct: 219 ALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGAN 276
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             A+ LL +ML  D  +R+S   AL H Y  +
Sbjct: 277 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP N+ VN +C L+
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVNEDCELR 163

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I DFGLAR      ++ MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  +
Sbjct: 171 RILDFGLAR----QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL  I +++GTP+PE + + + + A+ ++  Q+               A 
Sbjct: 227 ALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGAN 284
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             A+ LL +ML  D  +R+S   AL H Y  +
Sbjct: 285 PLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP N+ VN +  L+
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELR 171

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DF LAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDFYLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++ ++  + KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGC
Sbjct: 157 IVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 213
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           I  E++  +ILF  +  + Q   + + LGTP PE M+      + ++  + +        
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 235 XXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                    ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D GLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDGGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 58/213 (27%)
Query: 122 SSKICDFGLARV---------------EEPDPN-----------KAMTQEVVTQYYRAPE 155
           S K+CDFGLAR                 E D N           + +T  VVT++YRAPE
Sbjct: 194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE 253
Query: 156 ILMGARHYSAAVDVWSVGCIFAELL-------------------------------GRRI 184
           +++   +Y+ A+DVWS+GCIFAELL                               G   
Sbjct: 254 LILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDF 313
Query: 185 LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATGE 244
            F  +    QL +I ++LGTP+ E++  A +        +                ++ +
Sbjct: 314 KFHTRGNRDQLNVIFNILGTPSEEDIE-ALEKEDAKRYIRIFPKREGTDLAERFPASSAD 372
Query: 245 AVHLLVQMLYFDPTKRISVNSALCHPYLDEGRL 277
           A+HLL +ML F+P KRI++N  L HP+  E R+
Sbjct: 373 AIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +KY+HSA ILHRD+KP N LVN +C +K
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVK 196

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D GLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 165 KILDRGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRH-ACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF     + QL LI  L+GTP  E ++  + + A+ ++  Q+               A 
Sbjct: 221 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI--QSLTQMPKMNFANVFIGAN 278
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
             AV LL +ML  D  KRI+   AL H Y 
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 166 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 167 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 223
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 224 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 283
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 284 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 165 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 221
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 222 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 281
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 282 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 165

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 167 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 223
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 224 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 283
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 284 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 160 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 217 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 276
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 98.2 bits (243), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 159 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 215
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 216 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 275
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 276 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 159

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 160 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 217 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 276
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 54/206 (26%)
Query: 122 SSKICDFGLARV----------------EEPDPN-----KAMTQEVVTQYYRAPEILMGA 160
           S K+CDFGLAR                 EEP P+     K +T  VVT++YRAPE+++  
Sbjct: 167 SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ 226
Query: 161 RHYSAAVDVWSVGCIFAELL-----------GRRILF-----------------QAQSPV 192
            +Y+ ++D+WS GCIFAELL            R  LF                   +S  
Sbjct: 227 ENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNR 286
Query: 193 QQLGLITDLLGTPTPEEMRHAC--DGAKCHMLRQTRKXXXXXXXXXXXXXATGEAVHLLV 250
            QL +I +++GTPT +++++    +  K   L   RK              + + ++LL 
Sbjct: 287 DQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRK---PINLKQKYPSISDDGINLLE 343
Query: 251 QMLYFDPTKRISVNSALCHPYLDEGR 276
            ML F+P KRI+++ AL HPYL + R
Sbjct: 344 SMLKFNPNKRITIDQALDHPYLKDVR 369

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 204 KILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHK 260
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 261 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 320
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 321 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 204 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHK 260
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 261 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA 320
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  DP KRISV+ AL HPY++
Sbjct: 321 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  V T++YRAPEI++   HY+  VD+WSVGCI AELL  R
Sbjct: 194 KILDFGLAR----HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF     + QL  I  L GTP P  +       +      +               A  
Sbjct: 250 TLFPGTDHINQLQQIMRLTGTP-PASVISRMPSHEARNYINSLPQMPKRNFADVFIGANP 308
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            AV LL +ML  D  KRI+ + AL HPY  +
Sbjct: 309 LAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + LKY+HSA I+HRD+KP NL VN +C LK
Sbjct: 164 LRGLKYIHSADIIHRDLKPSNLAVNEDCELK 194

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      N  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  EL+   
Sbjct: 164 KILDFGLART--ASTNFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGS 220
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-------RHACDGAKCH---MLRQTRKXXXXXX 233
           ++FQ    + Q   + + LGTP+ E M       R+  +    +      +         
Sbjct: 221 VIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPS 280
Query: 234 XXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                   T +A  LL +ML  DP KRISV+ AL HPY+
Sbjct: 281 ESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 164

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
           +P+  +V   AT   KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
           +WSVGCI  E++   +LF     + Q   + + LGTP+PE M+      + ++  + +  
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                          ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
           +P+  +V   AT   KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
           +WSVGCI  E++   +LF     + Q   + + LGTP+PE M+      + ++  + +  
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                          ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
           +P+  +V   AT   KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
           +WSVGCI  E++   +LF     + Q   + + LGTP+PE M+      + ++  + +  
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                          ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT EVVT+YYRAPE+++G   Y   VD+WSVGCI  E++   
Sbjct: 166 KILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           +LF     + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 283 DSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M   VVT++YRAPE+++    Y+  VD+WSVGCI AE++  +
Sbjct: 168 KILDFGLAR----QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-RHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
            LF+    + QL  I  + GTP  E + R   D AK +M  +                A+
Sbjct: 224 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM--KGLPELEKKDFASILTNAS 281
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLD 273
             AV+LL +ML  D  +R++   AL HPY +
Sbjct: 282 PLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 346 EQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           E+L   R+   +       K L+Y+H+A I+HRD+KPGNL VN +C LK
Sbjct: 123 EKLGEDRIQFLV---YQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK 168

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      N  MT  VVT+YYRAPE+++G   Y+A VD+WSVGCI  EL+   
Sbjct: 166 KILDFGLART--ACTNFMMTPYVVTRYYRAPEVILGM-GYAANVDIWSVGCIMGELVKGC 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHM----------LRQTRKXXXXXX 233
           ++FQ    + Q   + + LGTP+ E M       + ++            +         
Sbjct: 223 VIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPS 282
Query: 234 XXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                   T +A  LL +ML  DP KRISV+ AL HPY+
Sbjct: 283 ESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 124 KICDFGLARVE-EPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           K+ DFG A++    +PN      + ++YYRAPE++ GA +Y+  +D+WS GC+ AEL+  
Sbjct: 182 KLIDFGSAKILIAGEPN---VSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
           + LF  +S + QL  I  +LGTP+ E+++        H   Q R                
Sbjct: 239 QPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRP---HPFSKVFRPRTP 295
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
            +A+ L+ ++L + P+ R++   ALCHP+ DE R
Sbjct: 296 PDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M  EVVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 166 KILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHK 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR     P +  T EVVT +YRAP++LMG++ YS  +D+WSVGCIFAE++   
Sbjct: 140 KIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S   QL  I  +LGTP  +   +  +  K        +             +  
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES-- 256
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             + LL +ML  DP +RI+   AL H Y  E
Sbjct: 257 -GIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++   
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           +LF     + Q   + + LGTP+PE M+      + ++  + +                 
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR     P +  T EVVT +YRAP++LMG++ YS  +D+WSVGCIFAE++   
Sbjct: 140 KIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S   QL  I  +LGTP  +   +  +  K        +             +  
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES-- 256
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             + LL +ML  DP +RI+   AL H Y  E
Sbjct: 257 -GIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++   
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           +LF     + Q   + + LGTP+PE M+      + ++  + +                 
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR     P +  T E+VT +YRAP++LMG++ YS  +D+WSVGCIFAE++   
Sbjct: 140 KIADFGLARAFGI-PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S   QL  I  +LGTP  +   +  +  K        +             +  
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES-- 256
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             + LL +ML  DP +RI+   AL H Y  E
Sbjct: 257 -GIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 160 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHK 216
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 217 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 276
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 277 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 171 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHK 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 228 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 287
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 288 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 327

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 171

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR     P +  T E++T +YR PEIL+G+RHYS +VD+WS+ CI+AE+L + 
Sbjct: 177 KIGDFGLARAFGI-PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   S + QL  I ++LG P  ++       A     +   K                
Sbjct: 236 PLFPGDSEIDQLFKIFEVLGLP--DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDD 293
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           E + LL  ML  DP KRIS  +AL HPY 
Sbjct: 294 EGLDLLTAMLEMDPVKRISAKNALEHPYF 322

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++   
Sbjct: 167 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 223
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           +LF     + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 224 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 283
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 284 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
           +P+  +V   AT   KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
           +WSVG I  E++   +LF     + Q   + + LGTP+PE M+      + ++  + +  
Sbjct: 208 IWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                          ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI  E++   
Sbjct: 166 KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           +LF     + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 223 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
           +P+  +V   AT   KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD
Sbjct: 153 KPSNIVVKSDATL--KILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVD 207
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKX 228
           +WSVG I  E++   +LF     + Q   + + LGTP+PE M+      + ++  + +  
Sbjct: 208 IWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYA 267
Query: 229 XXXXXXXXXXXXATGEAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
                          ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M  EVVT+YYRAPE+++G   Y   VD+WSVGCI  E++  +
Sbjct: 166 KILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVCHK 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           ILF  +  + Q   + + LGTP P  M+      + ++  + +                 
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPA 282
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 283 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  +  + K+ DFGLAR+       A+T  VVT +YRAPE+L+ +  Y+  VD+WSVGC
Sbjct: 151 ILVTSGGTVKLADFGLARIYSY--QMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGC 207
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           IFAE+  R+ LF   S   QLG I DL+G P  ++           + R           
Sbjct: 208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-----DVSLPRGAFPPRGPRPV 262
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL--DEG 275
                        LL++ML F+P KRIS   AL H YL  DEG
Sbjct: 263 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 305

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLA+     PN+A   +VVT++YRAPE+L GAR Y   VD+W+VGCI AELL R 
Sbjct: 152 KLADFGLAK-SFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
                 S + QL  I + LGTPT E+    C          T K             A  
Sbjct: 211 PFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY----VTFKSFPGIPLHHIFSAAGD 266
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           + + L+  +  F+P  RI+   AL   Y 
Sbjct: 267 DLLDLIQGLFLFNPCARITATQALKMKYF 295

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            + L+YLH   ILHRD+KP NLL++ N +LK
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLK 152

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 112 RQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWS 171
           + L++     + K+CDFG A+  +  P++     + +++YRAPE+++GA  Y+ ++D+WS
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAK--KLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWS 227
Query: 172 VGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXX 231
           +GC+F EL+  + LF  ++ + QL  I  ++GTPT E+M         H           
Sbjct: 228 IGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIR----MNPHYTEVRFPTLKA 283
Query: 232 XXXXXXXXXATGE-AVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHS 281
                     T   A+ LL Q+L ++P  RI+   A+ HP+ D  R  + S
Sbjct: 284 KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYES 334

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR     P    + EVVT +YRAP++LMG+R YS ++D+WS GCI AE++  +
Sbjct: 148 KLGDFGLARAFGI-PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR--KXXXXXXXXXXXXXA 241
            LF   +  +QL LI D++GTP            K +   Q R  +              
Sbjct: 207 PLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL 266
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            G  +  L  +L  +P  R+S   AL HP+  E
Sbjct: 267 DGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR      +  M   VVT+YYRAPE+++G   Y   VD+WSVGCI  E++   
Sbjct: 168 KILDFGLART--AGTSFMMVPFVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGG 224
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           +LF     + Q   + + LGTP PE M+      + ++  + +                 
Sbjct: 225 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPA 284
Query: 244 EAVH----------LLVQMLYFDPTKRISVNSALCHPYLD 273
           ++ H          LL +ML  D +KRISV+ AL HPY++
Sbjct: 285 DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 366 SLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +K+LHSA I+HRD+KP N++V S+C LK
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLK 168

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  +  + K+ DFGLAR+       A+   VVT +YRAPE+L+ +  Y+  VD+WSVGC
Sbjct: 143 ILVTSGGTVKLADFGLARIYSY--QMALAPVVVTLWYRAPEVLLQST-YATPVDMWSVGC 199
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           IFAE+  R+ LF   S   QLG I DL+G P  ++           + R           
Sbjct: 200 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-----DVSLPRGAFPPRGPRPV 254
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL--DEG 275
                        LL++ML F+P KRIS   AL H YL  DEG
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  +  + K+ DFGLAR+       A+   VVT +YRAPE+L+ +  Y+  VD+WSVGC
Sbjct: 143 ILVTSGGTVKLADFGLARIYSY--QMALDPVVVTLWYRAPEVLLQST-YATPVDMWSVGC 199
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           IFAE+  R+ LF   S   QLG I DL+G P  ++           + R           
Sbjct: 200 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-----DVSLPRGAFPPRGPRPV 254
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL--DEG 275
                        LL++ML F+P KRIS   AL H YL  DEG
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  +  + K+ DFGLAR+       A+   VVT +YRAPE+L+ +  Y+  VD+WSVGC
Sbjct: 143 ILVTSGGTVKLADFGLARIYSY--QMALFPVVVTLWYRAPEVLLQST-YATPVDMWSVGC 199
Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXX 234
           IFAE+  R+ LF   S   QLG I DL+G P  ++           + R           
Sbjct: 200 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-----DVSLPRGAFPPRGPRPV 254
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL--DEG 275
                        LL++ML F+P KRIS   AL H YL  DEG
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 297

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLAR +   P K    EVVT +YR P+IL+G+  YS  +D+W VGCIF E+   R
Sbjct: 140 KLADFGLARAKSI-PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LF   +  +QL  I  +LGTPT E         +       +              + G
Sbjct: 199 PLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDG 258
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
               LL ++L F+   RIS   A+ HP+ 
Sbjct: 259 --ADLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 170 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 226
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 227 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 283
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 284 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 329

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 241
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 242 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 298
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 299 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 159 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 215
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 216 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 272
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 273 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 318

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 219
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 220 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 276
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 277 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 219
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 220 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 276
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 277 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 152 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 208
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 209 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 265
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 266 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 311

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 179 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 235
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 236 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 292
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 293 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 338

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 241
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 242 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 298
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 299 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 187 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 243
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 244 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 303
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 304 TKVFRPRTPP---EAIALCSRLLEYTPTARLTPLEACAHSFFDELR 346

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 189 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 245
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 246 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 305
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 306 TKVFRPRTPP---EAIALCSRLLEYTPTARLTPLEACAHSFFDELR 348

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN      + ++YYRAPE++ GA  Y++++DVW
Sbjct: 155 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSXICSRYYRAPELIFGATDYTSSIDVW 211
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 212 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 268
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 269 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 314

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 164 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 220
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 221 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 277
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 278 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 323

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 230 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 286
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 287 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 346
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 347 TKVFRPRTPP---EAIALCSRLLEYTPTARLTPLEACAHSFFDELR 389

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 207
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 208 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 264
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 265 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 112 RQLVMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           + L++   T   K+CDFG A+ +   +PN +    + ++YYRAPE++ GA  Y++++DVW
Sbjct: 156 QNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVW 212
Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXX 230
           S GC+ AELL  + +F   S V QL  I  +LGTPT E++R            Q +    
Sbjct: 213 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK---A 269
Query: 231 XXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
                        EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 270 HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 315

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 92/209 (44%), Gaps = 57/209 (27%)
Query: 122 SSKICDFGLARVEEPDPN------------------------KAMTQEVVTQYYRAPEIL 157
           S KICDFGLAR    D +                        K +T  VVT++YRAPE++
Sbjct: 169 SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI 228
Query: 158 MGARHYSAAVDVWSVGCIFAELL-----------GRRILF-----------------QAQ 189
           +   +Y+ ++D+WS GCIFAELL            R  LF                   +
Sbjct: 229 LLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEK 288
Query: 190 SPVQQLGLITDLLGTPTPEEMR--HACDGAKCHMLRQTRKXXXXXXXXXXXXXATGEAVH 247
           S   QL +I +++GTP  E+++     +  K   L  TR               + E + 
Sbjct: 289 SNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRD---GIDLSKKYSSISKEGID 345
Query: 248 LLVQMLYFDPTKRISVNSALCHPYLDEGR 276
           LL  ML F+  KRI+++ AL HPYL + R
Sbjct: 346 LLESMLRFNAQKRITIDKALSHPYLKDVR 374

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
           K+ DFGLAR     P +  + EVVT +YR P++L GA+ YS ++D+WS GCIFAEL    
Sbjct: 141 KLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAA 199
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEE---MRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
           R LF       QL  I  LLGTPT E+   M    D     M   T              
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT----TSLVNVVPKL 255
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            ATG    LL  +L  +P +RIS   AL HPY  +
Sbjct: 256 NATGR--DLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 109 QPTRQLVMYQATYSS--KICDFGLARV-EEP-DPNKAMTQEVVTQYYRAPEILMGARHYS 164
           +P   LVM +       KI D G AR+   P  P   +   VVT +YRAPE+L+GARHY+
Sbjct: 155 KPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYT 214
Query: 165 AAVDVWSVGCIFAELLGRRILF-------QAQSPVQ--QLGLITDLLGTPTP---EEMRH 212
            A+D+W++GCIFAELL    +F       +  +P    QL  I +++G P     E+++ 
Sbjct: 215 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKK 274
Query: 213 ACDGAKCHMLRQTRKXXXX-----XXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSAL 267
             + +   +++  R+                     +A HLL ++L  DP KRI+   A+
Sbjct: 275 MPEHST--LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332
Query: 268 CHPYLDEGRLRFHSCMCKC 286
             PY  E  L        C
Sbjct: 333 QDPYFLEDPLPTSDVFAGC 351

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
           K+ +FGLAR     P +  + EVVT +YR P++L GA+ YS ++D+WS GCIFAEL    
Sbjct: 141 KLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEE---MRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
           R LF       QL  I  LLGTPT E+   M    D     M   T              
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT----TSLVNVVPKL 255
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
            ATG    LL  +L  +P +RIS   AL HPY  +
Sbjct: 256 NATGR--DLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+CDFG AR+    P+     EV T++YR+PE+L+G   Y   VDVW++GC+FAELL   
Sbjct: 142 KLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR--KXXXXXXXXXXXXXA 241
            L+  +S V QL LI   LG   P   RH    +        +                 
Sbjct: 201 PLWPGKSDVDQLYLIRKTLGDLIP---RHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNI 257
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
           +  A+ LL   L+ DPT+R++    L HPY +  R
Sbjct: 258 SYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR 292

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
           K+ DFGLAR     +   PN+   + VVT +YR PE+L+G R Y   +D+W  GCI AE+
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
             R  + Q  +   QL LI+ L G+ TPE   +  +      L   +             
Sbjct: 224 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 283
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                A+ L+ ++L  DP +RI  + AL H + 
Sbjct: 284 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 124 KICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           KI DFGLAR+ +P  +    +++ +VT++YR+P +L+   +Y+ A+D+W+ GCIFAE+L 
Sbjct: 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
            + LF     ++Q+ LI + +     E+ +        ++  +                 
Sbjct: 221 GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYI--RNDMTEPHKPLTQLLPGI 278
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           + EAV  L Q+L F P  R++   AL HPY+
Sbjct: 279 SREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 316 PSAPQPFDDTWE-RKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAF-----KSLKY 369
           PS  Q  DD     +L SV  V+E M   +A  L     PL +   +  F     + LKY
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG--PL-LEEHARLFMYQLLRGLKY 135
Query: 370 LHSARILHRDIKPGNLLVNS-NCILK 394
           +HSA +LHRD+KP NL +N+ + +LK
Sbjct: 136 IHSANVLHRDLKPANLFINTEDLVLK 161

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 115 VMYQATYSSKICDFGLAR---------------VEE-----PDPNKAMTQEVVTQYYRAP 154
           ++  A    K+ DFGL+R               + E      D    +T  V T++YRAP
Sbjct: 140 ILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP 199
Query: 155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEM---- 210
           EIL+G+  Y+  +D+WS+GCI  E+L  + +F   S + QL  I  ++  P+ E++    
Sbjct: 200 EILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQ 259
Query: 211 ----RHACDGAKCHM-LRQTRKXXXXXXXXXXXXXA------TGEAVHLLVQMLYFDPTK 259
               +   +  K  + +RQ+ K                      EA+ LL ++L F+P K
Sbjct: 260 SPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319
Query: 260 RISVNSALCHPYL 272
           RIS N AL HP++
Sbjct: 320 RISANDALKHPFV 332

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            K +KYLHS  +LHRD+KP N+L+N+ C +K
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILLNAECHVK 149

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
           K+ DFGLAR     +   PN+   + VVT +YR PE+L+G R Y   +D+W  GCI AE+
Sbjct: 164 KLADFGLARAFSLAKNSQPNRYXNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
             R  + Q  +   QL LI+ L G+ TPE   +  +      L   +             
Sbjct: 223 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 282
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                A+ L+ ++L  DP +RI  + AL H + 
Sbjct: 283 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
           K+ DFGLAR     +   PN+   + VVT +YR PE+L+G R Y   +D+W  GCI AE+
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
             R  + Q  +   QL LI+ L G+ TPE   +  +      L   +             
Sbjct: 224 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 283
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                A+ L+ ++L  DP +RI  + AL H + 
Sbjct: 284 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 124 KICDFGLARV----EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
           K+ DFGLAR     +   PN+   + VVT +YR PE+L+G R Y   +D+W  GCI AE+
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXX 239
             R  + Q  +   QL LI+ L G+ TPE   +  +      L   +             
Sbjct: 224 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 283
Query: 240 XATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                A+ L+ ++L  DP +RI  + AL H + 
Sbjct: 284 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+CDFG AR     P +    EV T++YRAPE+L+G   Y  AVDVW++GC+  E+    
Sbjct: 164 KLCDFGFARTLAA-PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTP 207
            LF   S + QL  I   LG   P
Sbjct: 223 PLFPGDSDIDQLYHIMMCLGNLIP 246

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 167 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 225 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 284
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 285 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 168 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 225
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 226 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 285
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 286 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 324

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 167 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 225 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 284
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 285 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 166 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 224 EPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 283
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 284 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P K     V ++Y++ PE+L+  + Y  ++D+WS+GC+FA ++ R+
Sbjct: 187 RLIDWGLA--EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 244
Query: 184 I-LFQAQSPVQQLGLITDLLGTPT----PEEMRHACD-GAKCHMLRQTRKXXXXXXXXXX 237
              F       QL  I  +LGT        + R   D   +  + R +RK          
Sbjct: 245 EPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADN 304
Query: 238 XXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
               + EA+  L ++L +D  +R++   A+ HPY  + R
Sbjct: 305 QHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 343

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ RR
Sbjct: 178 RLIDWGLA--EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRR 235
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH----------MLRQTRKXXXXX 232
              F  Q    QL  I  +LGT   EE+       K H          + + +RK     
Sbjct: 236 EPFFHGQDNYDQLVRIAKVLGT---EELYGYL--KKYHIDLDPHFNDILGQHSRKRWENF 290
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                    + EA+ LL ++L +D  +R++   A+ HPY 
Sbjct: 291 IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ RR
Sbjct: 173 RLIDWGLA--EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRR 230
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH----------MLRQTRKXXXXX 232
              F  Q    QL  I  +LGT   EE+       K H          + + +RK     
Sbjct: 231 EPFFHGQDNYDQLVRIAKVLGT---EELYGYL--KKYHIDLDPHFNDILGQHSRKRWENF 285
Query: 233 XXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                    + EA+ LL ++L +D  +R++   A+ HPY 
Sbjct: 286 IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 171 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 229 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 171 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 229 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 285
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 170 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 228 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 284
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 285 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 177 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 234
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 235 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 291
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 292 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ D+GLA  E   P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++ R+
Sbjct: 172 RLIDWGLA--EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 184 I-LFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH--------MLRQTRKXXXXXXX 234
              F       QL  I  +LGT   E++    D             + R +RK       
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH 286
Query: 235 XXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + EA+  L ++L +D   R++   A+ HPY 
Sbjct: 287 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
           +P   L+  Q     K+ DFG +  E    ++ +   + +++YRAPE+++GAR Y   +D
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYE----HQRVYTXIQSRFYRAPEVILGAR-YGMPID 281
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPT 206
           +WS+GCI AELL    L   +    QL  + +LLG P+
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
           +P   L+  Q     K+ DFG +  E    ++ +   + +++YRAPE+++GAR Y   +D
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYE----HQRVYTXIQSRFYRAPEVILGAR-YGMPID 281
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPT 206
           +WS+GCI AELL    L   +    QL  + +LLG P+
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 109 QPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVD 168
           +P   L+  Q     K+ DFG +  E    ++ +   + +++YRAPE+++GAR Y   +D
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYE----HQRVYXXIQSRFYRAPEVILGAR-YGMPID 281
Query: 169 VWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTP 205
           +WS+GCI AELL    L   +    QL  + +LLG P
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMP 318

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 41/174 (23%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG A  +    ++  +  V T++YRAPE+++ A  +S   DVWS+GCI  E     
Sbjct: 177 KVVDFGSATYD----DEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXX--XXXXA 241
            +F      + L ++  +LG P P+           HM+++TRK               +
Sbjct: 232 TVFPTHDSKEHLAMMERILG-PLPK-----------HMIQKTRKRKYFHHDRLDWDEHSS 279
Query: 242 TGEAV----------------------HLLVQMLYFDPTKRISVNSALCHPYLD 273
            G  V                       L+ +ML +DP KRI++  AL HP+ D
Sbjct: 280 AGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 32/151 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+ V E    K M + + T YY APE+L   + Y    DVWS+G I   LL   
Sbjct: 179 KIVDFGLSAVFEN--QKKMKERLGTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGY 234
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             F  Q+  + L  +     T    E ++  +GAK                         
Sbjct: 235 PPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK------------------------- 269
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
               L+ QML FD  +RIS   AL HP++ E
Sbjct: 270 ---DLIKQMLQFDSQRRISAQQALEHPWIKE 297

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 41/188 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFG          + + Q + +++YR+PE+L+G   Y  A+D+WS+GCI  E+    
Sbjct: 182 KIVDFG----SSCQLGQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGE 236
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPE--------------------EMRHACDGAKCHMLR 223
            LF   + V Q+  I ++LG P                        ++   DG + +   
Sbjct: 237 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 296
Query: 224 QTRKXXXXXXXXXXXXXA--TGEAVH----------LLVQMLYFDPTKRISVNSALCHPY 271
            TRK                 GE+ H          L+++ML +DP  RI    AL H +
Sbjct: 297 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 356
Query: 272 L----DEG 275
                DEG
Sbjct: 357 FKKTADEG 364

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFG          + + Q + +++YR+PE+L+G   Y  A+D+WS+GCI  E+    
Sbjct: 201 KIVDFG----SSCQLGQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGE 255
Query: 184 ILFQAQSPVQQLGLITDLLGTP-----------------TPE---EMRHACDGAKCHMLR 223
            LF   + V Q+  I ++LG P                  P+    ++   DG + +   
Sbjct: 256 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 224 QTRKXXXXXXXXXXXXXA--TGEAVH----------LLVQMLYFDPTKRISVNSALCHPY 271
            TRK                 GE+ H          L+++ML +DP  RI    AL H +
Sbjct: 316 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375
Query: 272 L 272
Sbjct: 376 F 376

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 37/181 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFG          + + Q + +++YR+PE+L+G   Y  A+D+WS+GCI  E+    
Sbjct: 201 KIVDFG----SSCQLGQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGE 255
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPE--------------------EMRHACDGAKCHMLR 223
            LF   + V Q+  I ++LG P                        ++   DG + +   
Sbjct: 256 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPP 315
Query: 224 QTRKXXXXXXXXXXXXXA--TGEAVH----------LLVQMLYFDPTKRISVNSALCHPY 271
            TRK                 GE+ H          L+++ML +DP  RI    AL H +
Sbjct: 316 GTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSF 375
Query: 272 L 272
Sbjct: 376 F 376

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 41/174 (23%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG A  +    ++  +  V  ++YRAPE+++ A  +S   DVWS+GCI  E     
Sbjct: 177 KVVDFGSATYD----DEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXX--XXXXA 241
            +F      + L ++  +LG P P+           HM+++TRK               +
Sbjct: 232 TVFPTHDSKEHLAMMERILG-PLPK-----------HMIQKTRKRKYFHHDRLDWDEHSS 279
Query: 242 TGEAV----------------------HLLVQMLYFDPTKRISVNSALCHPYLD 273
            G  V                       L+ +ML +DP KRI++  AL HP+ D
Sbjct: 280 AGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S ++ DFG A  +    ++  T  V T++YR PE+++    ++   DVWS+GCI  E   
Sbjct: 180 SIRVADFGSATFD----HEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYR 234
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRH---------------------------AC 214
              LFQ     + L ++  +LG P P  M H                            C
Sbjct: 235 GFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 293
Query: 215 DGAKCHMLRQTRKXXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
              K +ML+ + +                +   L+ +ML FDP +RI++  AL HP+ 
Sbjct: 294 KPLKSYMLQDSLEHV--------------QLFDLMRRMLEFDPAQRITLAEALLHPFF 337

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S ++ DFG A  +    ++  T  V T++YR PE+++    ++   DVWS+GCI  E   
Sbjct: 189 SIRVADFGSATFD----HEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYR 243
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
              LFQ     + L ++  +LG P P            HM+ +TRK              
Sbjct: 244 GFTLFQTHENREHLVMMEKILG-PIP-----------SHMIHRTRKQKYFYKGGLVWDEN 291
Query: 242 TGEAVH------------------------LLVQMLYFDPTKRISVNSALCHPYL 272
           + +  +                        L+ +ML FDP +RI++  AL HP+ 
Sbjct: 292 SSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S ++ DFG A  +    ++  T  V T++YR PE+++    ++   DVWS+GCI  E   
Sbjct: 212 SIRVADFGSATFD----HEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYR 266
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRH---------------------------AC 214
              LFQ     + L ++  +LG P P  M H                            C
Sbjct: 267 GFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 325
Query: 215 DGAKCHMLRQTRKXXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
              K +ML+ + +                +   L+ +ML FDP +RI++  AL HP+ 
Sbjct: 326 KPLKSYMLQDSLEHV--------------QLFDLMRRMLEFDPAQRITLAEALLHPFF 369

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 43/179 (24%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           ++ DFG A  +    ++  +  V T++YRAPE+++    +S   DVWS+GCI  E     
Sbjct: 196 RVVDFGSATFD----HEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGF 250
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
            LFQ     + L ++  +LG P P             M+R+TRK              T 
Sbjct: 251 TLFQTHDNREHLAMMERILG-PIP-----------SRMIRKTRKQKYFYRGRLDWDENTS 298
Query: 244 ------------------------EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLR 278
                                   +   L+  ML ++P KR+++  AL HP+    RLR
Sbjct: 299 AGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF--ARLR 355

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFG AR++ PD N+ +     T +Y APE L+    Y  + D+WS+G I   +L  +
Sbjct: 149 KIIDFGFARLKPPD-NQPLKTPCFTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQ 206
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           + FQ+            L  T   E M+    G                         + 
Sbjct: 207 VPFQSHD--------RSLTCTSAVEIMKKIKKG-------------DFSFEGEAWKNVSQ 245
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEG 275
           EA  L+  +L  DP KR+ ++    + +L +G
Sbjct: 246 EAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG A  +  D + ++   + T+ YRAPE+++    +  + D+WS GC+ AEL    
Sbjct: 202 KLIDFGCATFKS-DYHGSI---INTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGS 256
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM 210
           +LF+    ++ L ++  ++  P P+ M
Sbjct: 257 LLFRTHEHMEHLAMMESII-QPIPKNM 282

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + V+  +    K+ DFGL+RV E DP+ A T     +   + APE +   R
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI-AFR 229
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +S+A DVWS G +  E+L
Sbjct: 230 TFSSASDVWSFGVVMWEVL 248

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+     +    M + + T YY APE+L   + Y    DVWS G I   LL   
Sbjct: 164 KIVDFGLS--AHFEVGGKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGY 219
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             F  Q+  + L  +     +  P +     D                            
Sbjct: 220 PPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD---------------------------- 251
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           EA  L+  ML ++P+KRIS   AL HP++
Sbjct: 252 EAKQLVKLMLTYEPSKRISAEEALNHPWI 280

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + V+  +    K+ DFGL+RV E DP+ A T     +   + APE +   R
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI-AFR 229
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +S+A DVWS G +  E+L
Sbjct: 230 TFSSASDVWSFGVVMWEVL 248

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+     +    M + + T YY APE+L   + Y    DVWS G I   LL   
Sbjct: 147 KIVDFGLSA--HFEVGGKMKERLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGY 202
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             F  Q+  + L  +     +  P +     D                            
Sbjct: 203 PPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD---------------------------- 234
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           EA  L+  ML ++P+KRIS   AL HP++
Sbjct: 235 EAKQLVKLMLTYEPSKRISAEEALNHPWI 263

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+   +   N  M   + T YY APE+L G   Y    DVWS G I   LL   
Sbjct: 164 KIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGT 219
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             F  ++    L  +         E  ++A D      L Q R               + 
Sbjct: 220 PPFYGKNEYDILKRV---------ETGKYAFD------LPQWR-------------TISD 251
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           +A  L+ +ML F P+ RI+    L HP++
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+   +   N  M   + T YY APE+L G   Y    DVWS G I   LL   
Sbjct: 164 KIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGT 219
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
             F  ++    L  +         E  ++A D      L Q R               + 
Sbjct: 220 PPFYGKNEYDILKRV---------ETGKYAFD------LPQWR-------------TISD 251
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           +A  L+ +ML F P+ RI+    L HP++
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 57/149 (38%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+   +   N  M   + T YY APE+L G   Y    DVWS G I        
Sbjct: 164 KIIDFGLSTCFQQ--NTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILY------ 213
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           IL     P           G    + ++    G     L Q R               + 
Sbjct: 214 ILLSGTPP---------FYGKNEYDILKRVETGKYAFDLPQWR-------------TISD 251
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           +A  L+ +ML F P+ RI+    L HP++
Sbjct: 252 DAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGLARV E DP  A T     +   + +PE +   R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 39/159 (24%)
Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRI 184
           I DFGL+++E+   N  M+    T  Y APE+L   + YS AVD WS+G I   LL    
Sbjct: 150 ITDFGLSKMEQ---NGIMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 185 LFQAQSPVQQLGLITD---LLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
            F  ++  +    I +      +P  +++  +     CH+L +                 
Sbjct: 206 PFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEK----------------- 248
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFH 280
                         DP +R +   AL HP++D G    H
Sbjct: 249 --------------DPNERYTCEKALSHPWID-GNTALH 272

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE--VVTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + APE +   R
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AFR 202
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 203 KFTSASDVWSYGIVMWEVV 221

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL RV E DP  A T     +   + +PE +   R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 196
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 197 KFTSASDVWSYGIVLWEVM 215

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQE--VVTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 223
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 224 KFTSASDVWSYGIVLWEVM 242

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 196
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 197 KFTSASDVWSYGIVLWEVM 215

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 213
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 214 KFTSASDVWSYGIVLWEVM 232

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           V      + K+ DFGLAR+   D + A T  V T YY +PE  M    Y+   D+WS+GC
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDTSFAKTF-VGTPYYMSPE-QMNRMSYNEKSDIWSLGC 204
Query: 175 IFAEL 179
           +  EL
Sbjct: 205 LLYEL 209

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 38/156 (24%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG A+        A+     T YY APE+L G   Y  + D+WS+G I   LL   
Sbjct: 152 KLTDFGFAK---ETTQNALQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGF 207
Query: 184 ILF-----QAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXX 238
             F     QA SP  +  +     G P PE                              
Sbjct: 208 PPFYSNTGQAISPGMKRRIRLGQYGFPNPE-----------------------------W 238
Query: 239 XXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
              + +A  L+  +L  DPT+R+++   + HP++++
Sbjct: 239 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I DFGL+   E   +K M  ++ T YY APE+L G   Y    DVWS G I        
Sbjct: 175 RIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILY------ 224
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           IL     P           G    + ++    G     L Q +K              + 
Sbjct: 225 ILLSGCPPFN---------GANEYDILKKVEKGKYTFELPQWKK-------------VSE 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            A  L+ +ML + P+ RIS   AL H ++
Sbjct: 263 SAKDLIRKMLTYVPSMRISARDALDHEWI 291

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 38/156 (24%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG A+        A+     T YY APE+L G   Y  + D+WS+G I   LL   
Sbjct: 171 KLTDFGFAK---ETTQNALQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGF 226
Query: 184 ILF-----QAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXX 238
             F     QA SP  +  +     G P PE                              
Sbjct: 227 PPFYSNTGQAISPGMKRRIRLGQYGFPNPE-----------------------------W 257
Query: 239 XXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
              + +A  L+  +L  DPT+R+++   + HP++++
Sbjct: 258 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I DFGL+   E   +K M  ++ T YY APE+L G   Y    DVWS G I        
Sbjct: 169 RIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILY------ 218
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           IL     P           G    + ++    G     L Q +K              + 
Sbjct: 219 ILLSGCPPFN---------GANEYDILKKVEKGKYTFELPQWKK-------------VSE 256
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            A  L+ +ML + P+ RIS   AL H ++
Sbjct: 257 SAKDLIRKMLTYVPSMRISARDALDHEWI 285

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           V      + K+ DFGLAR+   D + A  + V T YY +PE  M    Y+   D+WS+GC
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDEDFA-KEFVGTPYYMSPE-QMNRMSYNEKSDIWSLGC 204
Query: 175 IFAEL 179
           +  EL
Sbjct: 205 LLYEL 209

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
             L+ Y     SKI   DFGL+++E  DP   ++    T  Y APE+L   + YS AVD 
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDC 201
Query: 170 WSVGCIFAELL 180
           WS+G I   LL
Sbjct: 202 WSIGVIAYILL 212

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I DFGL+   E   +K M  ++ T YY APE+L G   Y    DVWS G I        
Sbjct: 192 RIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILY------ 241
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           IL     P           G    + ++    G     L Q +K              + 
Sbjct: 242 ILLSGCPPFN---------GANEYDILKKVEKGKYTFELPQWKK-------------VSE 279
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            A  L+ +ML + P+ RIS   AL H ++
Sbjct: 280 SAKDLIRKMLTYVPSMRISARDALDHEWI 308

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 32/149 (21%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +I DFGL+   E   +K M  ++ T YY APE+L G   Y    DVWS G I        
Sbjct: 193 RIIDFGLSTHFEA--SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILY------ 242
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           IL     P           G    + ++    G     L Q +K              + 
Sbjct: 243 ILLSGCPPFN---------GANEYDILKKVEKGKYTFELPQWKK-------------VSE 280
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            A  L+ +ML + P+ RIS   AL H ++
Sbjct: 281 SAKDLIRKMLTYVPSMRISARDALDHEWI 309

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
             L+ Y     SKI   DFGL+++E  DP   ++    T  Y APE+L   + YS AVD 
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDC 201
Query: 170 WSVGCIFAELL 180
           WS+G I   LL
Sbjct: 202 WSIGVIAYILL 212

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
             L+ Y     SKI   DFGL+++E  DP   ++    T  Y APE+L   + YS AVD 
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDC 201
Query: 170 WSVGCIFAELL 180
           WS+G I   LL
Sbjct: 202 WSIGVIAYILL 212

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           G+  R    + ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYR 225
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 226 KFTSASDVWSYGIVLWEVM 244

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 112 RQLVMYQATYSSKI--CDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDV 169
             L+ Y     SKI   DFGL+++E  DP   ++    T  Y APE+L   + YS AVD 
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDC 201
Query: 170 WSVGCIFAELL 180
           WS+G I   LL
Sbjct: 202 WSIGVIAYILL 212

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 27/151 (17%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S +ICDFG A+    +    MT    T  + APE+L   + Y AA D+WS+G +   +L 
Sbjct: 158 SIRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLE-RQGYDAACDIWSLGVLLYTMLT 215
Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXA 241
               F A  P              TPEE+       K  +                    
Sbjct: 216 GYTPF-ANGP------------DDTPEEILARIGSGKFSL------------SGGYWNSV 250
Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           +  A  L+ +ML+ DP +R++    L HP++
Sbjct: 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
           +M  AT + K+ DFG+AR    D   ++TQ    + T  Y +PE   G     A  DV+S
Sbjct: 147 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 204
Query: 172 VGCIFAELLGRRILFQAQSPV 192
           +GC+  E+L     F   SPV
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPV 225

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
           +M  AT + K+ DFG+AR    D   ++TQ    + T  Y +PE   G     A  DV+S
Sbjct: 147 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 204
Query: 172 VGCIFAELLGRRILFQAQSPV 192
           +GC+  E+L     F   SPV
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPV 225

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
           +M  AT + K+ DFG+AR    D   ++TQ    + T  Y +PE   G     A  DV+S
Sbjct: 147 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 204
Query: 172 VGCIFAELLGRRILFQAQSPV 192
           +GC+  E+L     F   SPV
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPV 225

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 124 KICDFGLARVEE-------------PDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           KI DFGLA+                P  +  +T  + T  Y A E+L G  HY+  +D++
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215
Query: 171 SVGCIFAELL 180
           S+G IF E++
Sbjct: 216 SLGIIFFEMI 225

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 124 KICDFGLARVEE-------------PDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           KI DFGLA+                P  +  +T  + T  Y A E+L G  HY+  +D++
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215
Query: 171 SVGCIFAELL 180
           S+G IF E++
Sbjct: 216 SLGIIFFEMI 225

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 VPLCINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           V   IN  +     +K+ H  RI+HRDIKP N+L++SN  LK
Sbjct: 110 VDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLK 151

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARH 162
           Y  R    + ++  +    K+ DFGL+RV E DP    T     +   + APE +   R 
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI-SYRK 226
Query: 163 YSAAVDVWSVGCIFAELL--GRRILFQAQSPVQQLGLITDLLGTPTP 207
           +++A DVWS G +  E++  G R  ++  S  + +  I D    PTP
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVMKAINDGFRLPTP 272

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGAR 161
           GY  R    + ++  +    K+ DFGL+RV E DP    T     +   + APE +   R
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ-YR 223
Query: 162 HYSAAVDVWSVGCIFAELL 180
            +++A DVWS G +  E++
Sbjct: 224 KFTSASDVWSYGIVMWEVM 242

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
           +M  AT + K+ DFG+AR    D   ++TQ    + T  Y +PE   G     A  DV+S
Sbjct: 164 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 221
Query: 172 VGCIFAELLGRRILFQAQSPV 192
           +GC+  E+L     F   SPV
Sbjct: 222 LGCVLYEVLTGEPPFTGDSPV 242

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 41/156 (26%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +ICDFG A+    +    MT    T  + APE+L   + Y    D+WS+G +   +L   
Sbjct: 165 RICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLK-RQGYDEGCDIWSLGILLYTMLAGY 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-------RHACDGAKCHMLRQTRKXXXXXXXXX 236
             F A  P            + TPEE+       +    G   + + +T K         
Sbjct: 223 TPF-ANGP------------SDTPEEILTRIGSGKFTLSGGNWNTVSETAK--------- 260
Query: 237 XXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                      L+ +ML+ DP +R++    L HP++
Sbjct: 261 ----------DLVSKMLHVDPHQRLTAKQVLQHPWV 286

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T+   T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 158 KLTDFGFAK--ETTSHNSLTEPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 211

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 41/158 (25%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           +ICDFG A+    +    MT    T  + APE+L   + Y    D+WS+G +   +L   
Sbjct: 165 RICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLK-RQGYDEGCDIWSLGILLYTMLAGY 222
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEM-------RHACDGAKCHMLRQTRKXXXXXXXXX 236
             F A  P            + TPEE+       +    G   + + +T K         
Sbjct: 223 TPF-ANGP------------SDTPEEILTRIGSGKFTLSGGNWNTVSETAK--------- 260
Query: 237 XXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                      L+ +ML+ DP +R++    L HP++ +
Sbjct: 261 ----------DLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFGLA   E D  +  T    T  Y APE+L    H S  VDVWS+GCI   LL
Sbjct: 157 KIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 211

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFGLA   E D  +  T    T  Y APE+L    H S  VDVWS+GCI   LL
Sbjct: 161 KIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 215

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           V      + K+ DFGLAR+   D + A    V T YY +PE  M    Y+   D+WS+GC
Sbjct: 147 VFLDGKQNVKLGDFGLARILNHDTSFAKAF-VGTPYYMSPE-QMNRMSYNEKSDIWSLGC 204
Query: 175 IFAEL 179
           +  EL
Sbjct: 205 LLYEL 209

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFGLA   E D  +  T    T  Y APE+L    H S  VDVWS+GCI   LL
Sbjct: 157 KIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 211

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARH 162
           Y  R    + ++  +    K+ DFG++RV E DP  A T     +   + APE +   R 
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AYRK 189
Query: 163 YSAAVDVWSVGCIFAELL 180
           +++A DVWS G +  E++
Sbjct: 190 FTSASDVWSYGIVMWEVM 207

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARH 162
           Y  R    + ++  +    K+ DFG++RV E DP  A T     +   + APE +   R 
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AYRK 195
Query: 163 YSAAVDVWSVGCIFAELL 180
           +++A DVWS G +  E++
Sbjct: 196 FTSASDVWSYGIVMWEVM 213

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ--YYRAPEILMGARH 162
           Y  R    + V+ ++ +  KI DFGL +  E D      ++      ++ APE LM ++ 
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 206
Query: 163 YSAAVDVWSVGCIFAELL 180
           Y A+ DVWS G    ELL
Sbjct: 207 YIAS-DVWSFGVTLHELL 223

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 30/149 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLA +E     +A      T  Y +PE+L     Y   VD+W+ G I   LL   
Sbjct: 146 KLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLR-KEAYGKPVDIWACGVILYILL--- 200
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
                             +G P   +          H L Q  K              T 
Sbjct: 201 ------------------VGYPPFWDEDQ-------HKLYQQIKAGAYDFPSPEWDTVTP 235
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           EA +L+ QML  +P KRI+ + AL HP++
Sbjct: 236 EAKNLINQMLTINPAKRITAHEALKHPWV 264

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 105 YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQ--YYRAPEILMGARH 162
           Y  R    + V+ ++ +  KI DFGL +  E D      ++      ++ APE LM ++ 
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 194
Query: 163 YSAAVDVWSVGCIFAELL 180
           Y A+ DVWS G    ELL
Sbjct: 195 YIAS-DVWSFGVTLHELL 211

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 210 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 263

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 204 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 257

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARHYSAAVDVWSV 172
           ++  +    K+ DFGL+RV E DP  A T     +   + +PE +   R +++A DVWS 
Sbjct: 178 ILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSY 236
Query: 173 GCIFAELL 180
           G +  E++
Sbjct: 237 GIVLWEVM 244

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 158 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 211

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 160 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 213

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEV--VTQYYRAPEILMGARHYSAAVDVWSV 172
           ++  +    K+ DFG++RV E DP  A T     +   + APE +   R +++A DVWS 
Sbjct: 162 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSY 220
Query: 173 GCIFAELL 180
           G +  E++
Sbjct: 221 GIVMWEVM 228

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 166 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 219

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 165 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 218

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 159 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 212

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 160 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 213

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 164 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 217

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQE---VVTQYYRAPEILMGARHYSAAVDVWS 171
           +M  AT + K+ DFG+AR    D   ++TQ    + T  Y +PE   G     A  DV+S
Sbjct: 147 IMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYS 204
Query: 172 VGCIFAELLGRRILFQAQSP 191
           +GC+  E+L     F   SP
Sbjct: 205 LGCVLYEVLTGEPPFTGDSP 224

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFG A+  E   + ++T    T YY APE+L G   Y  + D+WS+G I   LL
Sbjct: 174 KLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILL 227

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 30/149 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLA +E     +A      T  Y +PE+L     Y   VD+W+ G I   LL   
Sbjct: 173 KLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLR-KDPYGKPVDIWACGVILYILL--- 227
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
                             +G P   +          H L Q  K              T 
Sbjct: 228 ------------------VGYPPFWDEDQ-------HKLYQQIKAGAYDFPSPEWDTVTP 262
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           EA +L+ QML  +P KRI+ + AL HP++
Sbjct: 263 EAKNLINQMLTINPAKRITADQALKHPWV 291

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 17/148 (11%)
Query: 143 TQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PVQQLG 196
           T  + T+ YR+PE+L+GA  +    D+WS  C+  EL+    LF+             + 
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 197 LITDLLGTPTPEEMRHACDGAKCH----MLRQTRKXX------XXXXXXXXXXXATGEAV 246
            I +LLG      +R+            +LR   K                      E  
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 247 HLLVQMLYFDPTKRISVNSALCHPYLDE 274
             L  ML  DP KR      + HP+L +
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLKD 339

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 17/148 (11%)
Query: 143 TQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PVQQLG 196
           T  + T+ YR+PE+L+GA  +    D+WS  C+  EL+    LF+             + 
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 197 LITDLLGTPTPEEMRHACDGAKCH----MLRQTRKXX------XXXXXXXXXXXATGEAV 246
            I +LLG      +R+            +LR   K                      E  
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 247 HLLVQMLYFDPTKRISVNSALCHPYLDE 274
             L  ML  DP KR      + HP+L +
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLKD 339

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSV 172
           ++  AT + K+ DFG+AR      N       V  T  Y +PE   G     A  DV+S+
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG-DSVDARSDVYSL 205
Query: 173 GCIFAELLGRRILFQAQSPV 192
           GC+  E+L     F   SPV
Sbjct: 206 GCVLYEVLTGEPPFTGDSPV 225

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S K+ DFG      P+ +K  T  V T Y+ APE++   + Y   VD+WS+G +  E++ 
Sbjct: 154 SVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE 211
Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
               +  ++P++ L LI    GTP    PE++
Sbjct: 212 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 242

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG+A ++  +        V T ++ APE++     Y   VDVW  G I   LL   
Sbjct: 173 KLGDFGVA-IQLGESGLVAGGRVGTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGC 230
Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXATG 243
           + F         G+I        P +  H  + AK                         
Sbjct: 231 LPFYGTKERLFEGIIKGKYKM-NPRQWSHISESAK------------------------- 264
Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
               L+ +ML  DP +RI+V  AL HP+L E
Sbjct: 265 ---DLVRRMLMLDPAERITVYEALNHPWLKE 292

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
           ++    +++KI DFGLAR  E      M   +V T  Y APE L G    +   D++S G
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EITPKSDIYSFG 221
Query: 174 CIFAELL 180
            +  E++
Sbjct: 222 VVLLEII 228

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 29/179 (16%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL- 180
           S   C   L+R ++  P         T  +RAPE+L    + + A+D+WS G IF  LL 
Sbjct: 189 SQNKCSICLSRRQQVAPRAG------TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 181 GRRILFQAQSPVQQLGLITDLLGTPT-------------------PEEMRHACD---GAK 218
           GR   ++A   +  L  I  + G+                      +++R  C+   G  
Sbjct: 243 GRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMD 302
Query: 219 CHMLRQTRKXXXXXXXXXXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRL 277
               + T                  EA  LL ++L  +P  RI+   AL HP+  +  L
Sbjct: 303 SSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMSL 361

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+ +   D N   T    +  Y APE++ G  +    VDVWS G I   +L RR
Sbjct: 143 KIADFGLSNIMT-DGNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
Query: 184 ILFQAQS 190
           + F  +S
Sbjct: 201 LPFDDES 207

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 33/150 (22%)
Query: 124 KICDFGL-ARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           K+ DFG  A++ +  P +     V T Y+ APE++     Y+  VD+WS+G +  E++  
Sbjct: 181 KLSDFGFCAQISKDVPKRKXL--VGTPYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDG 237
Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKXXXXXXXXXXXXXAT 242
              + + SPVQ +  + D   +P P+             L+ + K               
Sbjct: 238 EPPYFSDSPVQAMKRLRD---SPPPK-------------LKNSHKVSPVLR--------- 272
Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                 L +ML  DP +R +    L HP+L
Sbjct: 273 ----DFLERMLVRDPQERATAQELLDHPFL 298

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 122 SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG 181
           S K+ DFG      P+ +K  T  V T Y+ APE++   + Y   VD+WS+G +  E++ 
Sbjct: 155 SVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE 212
Query: 182 RRILFQAQSPVQQLGLITDLLGTP---TPEEM 210
               +  ++P++ L LI    GTP    PE++
Sbjct: 213 GEPPYLNENPLRALYLIAT-NGTPELQNPEKL 243

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 124 KICDFGLARVEE-------------PDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVW 170
           KI DFGLA+                P  +  +T  + T  Y A E+L G  HY+  +D +
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXY 215
Query: 171 SVGCIFAELL 180
           S+G IF E +
Sbjct: 216 SLGIIFFEXI 225

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+ +   D N   T    +  Y APE++ G  +    VDVWS G I   +L RR
Sbjct: 153 KIADFGLSNIM-TDGNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
Query: 184 ILFQAQS 190
           + F  +S
Sbjct: 211 LPFDDES 217

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+ +   D N   T    +  Y APE++ G  +    VDVWS G I   +L RR
Sbjct: 147 KIADFGLSNIMT-DGNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
Query: 184 ILFQAQS 190
           + F  +S
Sbjct: 205 LPFDDES 211

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL+ +   D N   T    +  Y APE++ G  +    VDVWS G I   +L RR
Sbjct: 152 KIADFGLSNIM-TDGNFLKTS-CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
Query: 184 ILFQAQS 190
           + F  +S
Sbjct: 210 LPFDDES 216

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 31/158 (19%)
Query: 139 NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PV 192
           +K  T+++ T+ YR+ E+L+GA  YS   D+WS  C+  EL     LF+  S        
Sbjct: 239 HKHFTEDIQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDE 297
Query: 193 QQLGLITDLLGTPTPE-----------------EMRHACDGAKCHMLRQTRKXXXXXXXX 235
             +  I +LLG+  P                  E+RH         L+            
Sbjct: 298 DHIAHIIELLGS-IPRHFALSGKYSREFFNRRGELRHITK------LKPWSLFDVLVEKY 350
Query: 236 XXXXXATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD 273
                   +    L+ ML   P KR S    L HP+L+
Sbjct: 351 GWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 388

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
           ++    +++KI DFGLAR  E      M   +V T  Y APE L G    +   D++S G
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EITPKSDIYSFG 221
Query: 174 CIFAELL 180
            +  E++
Sbjct: 222 VVLLEII 228

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
           ++    +++KI DFGLAR  E      M   +V T  Y APE L G    +   D++S G
Sbjct: 158 ILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EITPKSDIYSFG 215
Query: 174 CIFAELL 180
            +  E++
Sbjct: 216 VVLLEII 222

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D G A       +K  T+++ T+ YR+ E+L+G+  Y+   D+WS  C+  EL    
Sbjct: 236 KIADLGNACW----VHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 290
Query: 184 ILFQAQSPVQ------QLGLITDLLG 203
            LF+  S  +       + LI +LLG
Sbjct: 291 YLFEPHSGEEYTRDEDHIALIIELLG 316

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFGLA   E D  +   ++V+  T  Y APE+L    H S  VDVWS+GCI   LL
Sbjct: 181 KIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 235

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFGLA   E D  +   ++V+  T  Y APE+L    H S  VDVWS+GCI   LL
Sbjct: 179 KIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 233

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           KI DFGLA   E D  +   ++V+  T  Y APE+L    H S  VDVWS+GCI   LL
Sbjct: 155 KIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLL 209

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D G A       +K  T+++ T+ YR+ E+L+G+  Y+   D+WS  C+  EL    
Sbjct: 220 KIADLGNACW----VHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGD 274
Query: 184 ILFQAQSPVQ------QLGLITDLLG 203
            LF+  S  +       + LI +LLG
Sbjct: 275 YLFEPHSGEEYTRDEDHIALIIELLG 300

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	395
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.98
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.98
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.98
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.98
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.98
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.98
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.98
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.98
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.98
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.98
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.98
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.98
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.98
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.98
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.98
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.98
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.98
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.98
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.98
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.97
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.97
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.96
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.96
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.96
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.96
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.96
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.95
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.95
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.95
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.95
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.95
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.95
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.95
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.95
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.95
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.95
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.94
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.86
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.83
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.55
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.3
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.96
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	98.69
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.68
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.68
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.67
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	98.67
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	98.67
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.66
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	98.65
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	98.64
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.56
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.55
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.55
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.54
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.53
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.49
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.49
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.48
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.48
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.44
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.4
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.21
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	98.16
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.15
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.13
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.13
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.13
3uqc_A	286	Probable conserved transmembrane protein; structur	98.13
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.11
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.1
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.09
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.08
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.08
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.07
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.07
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.07
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.06
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.04
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.03
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.03
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.02
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.02
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.02
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.01
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.01
3niz_A	311	Rhodanese family protein; structural genomics, str	98.01
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	97.99
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.99
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	97.99
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	97.98
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	97.98
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	97.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	97.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	97.96
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	97.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	97.95
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	97.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	97.94
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	97.93
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.93
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	97.93
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	97.93
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	97.93
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	97.93
3q4u_A	301	Activin receptor type-1; structural genomics conso	97.93
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	97.92
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.92
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	97.92
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	97.92
3pls_A	298	Macrophage-stimulating protein receptor; protein k	97.91
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	97.91
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	97.9
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	97.9
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	97.9
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	97.9
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.9
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	97.89
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	97.89
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	97.89
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	97.89
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	97.88
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	97.88
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	97.88
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	97.88
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	97.88
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	97.88
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	97.88
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	97.88
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	97.87
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	97.87
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.87
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	97.87
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	97.87
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	97.87
3ork_A	311	Serine/threonine protein kinase; structural genomi	97.87
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	97.87
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	97.86
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	97.86
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	97.86
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	97.86
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	97.85
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	97.85
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	97.85
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	97.85
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	97.84
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	97.84
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	97.84
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	97.84
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.83
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	97.83
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	97.83
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	97.83
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	97.83
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	97.83
3soc_A	322	Activin receptor type-2A; structural genomics cons	97.82
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	97.82
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	97.82
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	97.82
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	97.82
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	97.82
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	97.81
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	97.81
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	97.81
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	97.81
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	97.81
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	97.81
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	97.81
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	97.81
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	97.81
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	97.8
3an0_A	340	Dual specificity mitogen-activated protein kinase;	97.8
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	97.8
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	97.8
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	97.8
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	97.8
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	97.8
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	97.79
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.78
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	97.78
3fme_A	290	Dual specificity mitogen-activated protein kinase;	97.78
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	97.78
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.78
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	97.78
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	97.77
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	97.77
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	97.77
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	97.77
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	97.77
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	97.77
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.77
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	97.76
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.76
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	97.76
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	97.76
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	97.76
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	97.76
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	97.76
2a19_B	284	Interferon-induced, double-stranded RNA-activated	97.76
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	97.75
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	97.75
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	97.75
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	97.75
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.75
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	97.74
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	97.74
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	97.74
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	97.74
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	97.74
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	97.74
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.74
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	97.74
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	97.74
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	97.73
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	97.73
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	97.73
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	97.73
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	97.73
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	97.73
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	97.72
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	97.72
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	97.71
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	97.71
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.7
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	97.7
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.7
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	97.69
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	97.69
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	97.68
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	97.68
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	97.67
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	97.67
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	97.67
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.67
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	97.67
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	97.67
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	97.67
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	97.67
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	97.66
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	97.66
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	97.65
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	97.65
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	97.64
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	97.64
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	97.64
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	97.63
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.63
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	97.63
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	97.63
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	97.62
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	97.62
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	97.62
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	97.62
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	97.61
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	97.61
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.61
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	97.6
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	97.6
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	97.6
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.58
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	97.58
3bhy_A	283	Death-associated protein kinase 3; death associate	97.55
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	97.55
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	97.54
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	97.53
2dyl_A	318	Dual specificity mitogen-activated protein kinase	97.53
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	97.52
3aln_A	327	Dual specificity mitogen-activated protein kinase;	97.52
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	97.52

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.9e-47  Score=364.08  Aligned_cols=236  Identities=30%  Similarity=0.459  Sum_probs=187.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC---CCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD---PNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~---~~~~~~~~~~t~~y~aP  154 (395)
                      .+.+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+.+...   .....++++||++||||
T Consensus       152 ~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~AP  231 (398)
T 4b99_A          152 SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP  231 (398)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCH
Confidence            357899999999999999999999999999999999999999999999999999875432   22345678999999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+...|+.++||||+|||+|||++|.+||.+.+..+++..|....|.|+...+................. .....+
T Consensus       232 Ev~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  310 (398)
T 4b99_A          232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPP-RQPVPW  310 (398)
T ss_dssp             HHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCC-CCCCCH
T ss_pred             HHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCC-cCCCCH
Confidence            9999877689999999999999999999999999999999999999999999877655432222111111111 111123


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDF  314 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (395)
                      ....+..++++.|||.+||.+||.+||||+|+|+||||...    +                              .+..
T Consensus       311 ~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~----~------------------------------~p~~  356 (398)
T 4b99_A          311 ETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY----H------------------------------DPDD  356 (398)
T ss_dssp             HHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT----C------------------------------CGGG
T ss_pred             HHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC----C------------------------------CCcc
Confidence            34567789999999999999999999999999999999751    1                              1234


Q ss_pred             CCCCCCCCCchhHHhhhhhhHHhhHHHHHHHhhh
Q psy2865         315 EPSAPQPFDDTWERKLTSVQQVKEEMHKFIAEQL  348 (395)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~I~~~~  348 (395)
                      +|.+..+|+..++....+...+++.++.++..+.
T Consensus       357 ~p~~~~~~~~~~~~~~~~~~~~k~~i~~ei~~~~  390 (398)
T 4b99_A          357 EPDCAPPFDFAFDREALTRERIKEAIVAEIEDFH  390 (398)
T ss_dssp             SCCCSSCCCCHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCccchhhcCHHHHHHHHHHHHHHHH
Confidence            5666677888877777777888888888777654

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.8e-44  Score=334.44  Aligned_cols=165  Identities=19%  Similarity=0.313  Sum_probs=144.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+..... ....+..+||+.|||||++.
T Consensus       165 ~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GTp~YmAPEvl~  243 (346)
T 4fih_A          165 TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKSLVGTPYWMAPELIS  243 (346)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-SCCBCCCCSCGGGCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCC-CCcccccccCcCcCCHHHHC
Confidence            56999999999999999999999999999999999999999999999999999976542 23456789999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.+ |+.++||||+|||+|||++|.+||.+.+..+.+..|......                             ....+
T Consensus       244 ~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~-----------------------------~~~~~  293 (346)
T 4fih_A          244 RLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-----------------------------RLKNL  293 (346)
T ss_dssp             TCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC-----------------------------CCSCG
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC-----------------------------CCCcc
Confidence            876 999999999999999999999999999988888777542210                             11233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+++++.+||.+||..||.+||||+|+|+||||..
T Consensus       294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  329 (346)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence            467899999999999999999999999999999975

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.2e-44  Score=330.82  Aligned_cols=167  Identities=23%  Similarity=0.342  Sum_probs=147.1

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPE  155 (395)
                      +.+.+++..+++++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+.+.... .....+.|||+.|||||
T Consensus       125 ~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPE  204 (311)
T 4aw0_A          125 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE  204 (311)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHH
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHH
Confidence            34679999999999999999999999999999999999999999999999999999765332 23456789999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++||||+||++|+|++|.+||.+.+..+.+..|...                                .+
T Consensus       205 vl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~--------------------------------~~  251 (311)
T 4aw0_A          205 LLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--------------------------------EY  251 (311)
T ss_dssp             HHHHSC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--------------------------------CC
T ss_pred             HHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------------------------CC
Confidence            999876 899999999999999999999999999988888877541                                12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHH------HHcCCccccCc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNS------ALCHPYLDEGR  276 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e------~L~Hp~f~~~~  276 (395)
                      .++...++++.|||.+||..||.+|+|++|      +++||||.+..
T Consensus       252 ~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          252 DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            355678899999999999999999999988      58999998743

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=5.1e-44  Score=324.92  Aligned_cols=163  Identities=23%  Similarity=0.346  Sum_probs=134.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....  ....++.+||+.|||||++
T Consensus       106 ~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--~~~~~~~~GT~~Y~APE~~  183 (275)
T 3hyh_A          106 RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVI  183 (275)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----------------CTTSCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC--CCccCCeeECcccCChhhh
Confidence            45799999999999999999999999999999999999999999999999999987543  2345567999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|.+||.+.+....+..|...                                ...+
T Consensus       184 ~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~--------------------------------~~~~  231 (275)
T 3hyh_A          184 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--------------------------------VYTL  231 (275)
T ss_dssp             SSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--------------------------------CCCC
T ss_pred             cCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            98875578999999999999999999999998877776666431                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +...++.+.+||.+||..||++|||++|+|+||||..
T Consensus       232 p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          232 PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence            5678899999999999999999999999999999964

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.7e-43  Score=335.34  Aligned_cols=196  Identities=23%  Similarity=0.352  Sum_probs=147.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-CCeEEeeCCcccccCCCC-------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-YSSKICDFGLARVEEPDP-------------------  138 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-~~vKl~DFGla~~~~~~~-------------------  138 (395)
                      +.+++..++.++.||+.||.|||+.|||||||||+|||++.+ +.+||+|||+|+......                   
T Consensus       112 ~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (361)
T 4f9c_A          112 NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQN  191 (361)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC------------
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccc
Confidence            358999999999999999999999999999999999999876 799999999998643221                   


Q ss_pred             --------CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCC-CCCChHhHHHHHHHhcCCCCHHH
Q psy2865         139 --------NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILF-QAQSPVQQLGLITDLLGTPTPEE  209 (395)
Q Consensus       139 --------~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f-~~~~~~~~l~~i~~~~g~~~~~~  209 (395)
                              ....+..+||++|||||++.+...|+.++||||+|||+|||++|.+|| .+.+..+++..|..++|++....
T Consensus       192 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~  271 (361)
T 4f9c_A          192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQ  271 (361)
T ss_dssp             --------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHH
T ss_pred             cccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchh
Confidence                    122455689999999999998777999999999999999999999877 56778899999999999765443


Q ss_pred             HHhhhhhhh--------------hhhhhc-----cc---cCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHH
Q psy2865         210 MRHACDGAK--------------CHMLRQ-----TR---KSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSAL  267 (395)
Q Consensus       210 ~~~~~~~~~--------------~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L  267 (395)
                      +........              ......     +.   ...........+...++++.|||.+||++||.+|+||+|||
T Consensus       272 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL  351 (361)
T 4f9c_A          272 AAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEAL  351 (361)
T ss_dssp             HHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHH
T ss_pred             hhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHh
Confidence            332211000              000000     00   00000111233567899999999999999999999999999


Q ss_pred             cCCcccc
Q psy2865         268 CHPYLDE  274 (395)
Q Consensus       268 ~Hp~f~~  274 (395)
                      +||||.+
T Consensus       352 ~Hp~f~~  358 (361)
T 4f9c_A          352 LHPFFKD  358 (361)
T ss_dssp             TSGGGTT
T ss_pred             cCcccCC
Confidence            9999976

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.4e-43  Score=326.33  Aligned_cols=166  Identities=20%  Similarity=0.276  Sum_probs=144.2

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +.+.+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+..... ....++.+||+.|||||+
T Consensus       119 ~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GT~~YmAPE~  197 (304)
T 3ubd_A          119 KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFCGTVEYMAPEV  197 (304)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC------CCCCSCCCCGGGCCHHH
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC-CccccccccCcccCCHHH
Confidence            3467999999999999999999999999999999999999999999999999999865432 234566799999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++||||+||++|||++|.+||.+.+..+.+..|...                                ...
T Consensus       198 ~~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--------------------------------~~~  244 (304)
T 3ubd_A          198 VNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--------------------------------KLG  244 (304)
T ss_dssp             HHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCC
T ss_pred             hccCC-CCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC--------------------------------CCC
Confidence            98876 999999999999999999999999999988888877541                                123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGR  276 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~  276 (395)
                      ++...++++.+||.+||+.||.+|||     ++|+|+||||.+..
T Consensus       245 ~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          245 MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence            45678999999999999999999998     57999999998743

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5e-43  Score=335.46  Aligned_cols=166  Identities=19%  Similarity=0.313  Sum_probs=145.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.|||||||||+||||+.+|.|||+|||+|+.+... ....+..+||++|||||++
T Consensus       241 ~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GTp~YmAPEvl  319 (423)
T 4fie_A          241 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKSLVGTPYWMAPELI  319 (423)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS-CCCBCCCEECTTTCCHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC-CccccccccCcCcCCHHHH
Confidence            356999999999999999999999999999999999999999999999999999876542 2345678999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++||||||||+|||++|.+||.+.+..+.+..|.....                             .....
T Consensus       320 ~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-----------------------------~~~~~  369 (423)
T 4fie_A          320 SRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-----------------------------PRLKN  369 (423)
T ss_dssp             TTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-----------------------------CCCSC
T ss_pred             CCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----------------------------CCCcc
Confidence            8876 99999999999999999999999999998888877754211                             01223


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +..+++.+.+||.+||..||.+|+||+|+|+||||..
T Consensus       370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence            4567899999999999999999999999999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=8e-44  Score=333.45  Aligned_cols=163  Identities=22%  Similarity=0.255  Sum_probs=142.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+..... ....+..+||+.|||||++.
T Consensus       120 ~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GT~~YmAPE~l~  198 (350)
T 4b9d_A          120 VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARACIGTPYYLSPEICE  198 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-HHHHHHHHSCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-cccccccCCCccccCHHHHC
Confidence            45688889999999999999999999999999999999999999999999999875321 12345678999999999999


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. |+.++||||||||+|||++|.+||.+.+..+.+..|....                               ....+
T Consensus       199 ~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-------------------------------~~~~~  246 (350)
T 4b9d_A          199 NKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-------------------------------FPPVS  246 (350)
T ss_dssp             TCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-------------------------------CCCCC
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-------------------------------CCCCC
Confidence            876 9999999999999999999999999999888887775421                               11234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++++.+||.+||..||.+|||++|+|+||||..
T Consensus       247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            567899999999999999999999999999999975

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.6e-42  Score=316.30  Aligned_cols=164  Identities=20%  Similarity=0.190  Sum_probs=136.0

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccc
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRA  153 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a  153 (395)
                      +...+++..++.++.||+.||.|||++|  ||||||||+|||++. ++.+||+|||+|+...   ....++.+||+.|||
T Consensus       122 ~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~---~~~~~~~~GTp~YmA  198 (290)
T 3fpq_A          122 RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---ASFAKAVIGTPEFMA  198 (290)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC---TTSBEESCSSCCCCC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC---CCccCCcccCccccC
Confidence            3467899999999999999999999998  999999999999984 7999999999998643   234566799999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+ . |+.++|||||||++|||+||.+||.+.+....+...+.. +.++                           
T Consensus       199 PE~~~~-~-y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~-~~~~---------------------------  248 (290)
T 3fpq_A          199 PEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKP---------------------------  248 (290)
T ss_dssp             GGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCC---------------------------
T ss_pred             HHHcCC-C-CCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc-CCCC---------------------------
Confidence            998865 4 999999999999999999999999876655544333211 1111                           


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ..++...++++.+||.+||..||++|||++|+|+||||..
T Consensus       249 -~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          249 -ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence             1234567889999999999999999999999999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.3e-41  Score=316.92  Aligned_cols=168  Identities=19%  Similarity=0.206  Sum_probs=140.1

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-CeEEeeCCcccccCCCCCC----Ccccccccccc
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPNK----AMTQEVVTQYY  151 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~~----~~~~~~~t~~y  151 (395)
                      +.+.|++..++.++.||+.||.|||+.|||||||||+|||++.++ .+||+|||+|+.+......    .....+||+.|
T Consensus       143 ~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y  222 (336)
T 4g3f_A          143 QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH  222 (336)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGG
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccc
Confidence            345799999999999999999999999999999999999999987 6999999999976532211    12345899999


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      ||||++.+.+ |+.++||||+||++|||++|.+||.+.+....+..|...  .+                          
T Consensus       223 mAPE~~~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~--------------------------  273 (336)
T 4g3f_A          223 MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE--PP--------------------------  273 (336)
T ss_dssp             CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS--CC--------------------------
T ss_pred             cCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC--CC--------------------------
Confidence            9999999876 999999999999999999999999988877776666531  11                          


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHH-------------HcCCcccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSA-------------LCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~-------------L~Hp~f~~  274 (395)
                       ....+++.+++.+.+||.+||..||.+||||.|+             |.|||+..
T Consensus       274 -~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          274 -PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             -GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             -CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence             1234567889999999999999999999999997             57999865

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.8e-40  Score=315.46  Aligned_cols=196  Identities=28%  Similarity=0.476  Sum_probs=155.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC--------------------C
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD--------------------P  138 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~--------------------~  138 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.....                    .
T Consensus       104 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (388)
T 3oz6_A          104 NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD  183 (388)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccc
Confidence            46888888999999999999999999999999999999999999999999999865321                    1


Q ss_pred             CCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhh
Q psy2865         139 NKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAK  218 (395)
Q Consensus       139 ~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~  218 (395)
                      ....+.++||++|+|||++.+...|+.++||||+|||+|+|++|.+||.+.+..+++..|...+|.|+.+.+........
T Consensus       184 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  263 (388)
T 3oz6_A          184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFA  263 (388)
T ss_dssp             ------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSH
T ss_pred             cccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHH
Confidence            22345679999999999998865699999999999999999999999999999999999999999999988765532211


Q ss_pred             hhhhhccc-----cCCccchh----------hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         219 CHMLRQTR-----KSQSLSSL----------YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       219 ~~~~~~~~-----~~~~~~~~----------~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ........     ....+...          .......++.+.+||.+||.+||.+||||+|+|+||||..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          264 KTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             HHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             HHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence            11111000     00000000          1123467899999999999999999999999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-39  Score=309.36  Aligned_cols=230  Identities=28%  Similarity=0.441  Sum_probs=179.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...    ...+.+++|++|+|||++.
T Consensus       123 ~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----~~~~~~~~t~~y~aPE~~~  198 (367)
T 1cm8_A          123 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD----SEMTGYVVTRWYRAPEVIL  198 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC----SSCCSSCSCGGGCCTHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc----cccCcCcCCCCcCCHHHHh
Confidence            468888899999999999999999999999999999999999999999999998753    2356678999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...|+.++||||+||++|+|++|.+||.+.+..+++..|...+|.|+.+.+..+............... ....+..+.
T Consensus       199 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  277 (367)
T 1cm8_A          199 NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL-EKKDFASIL  277 (367)
T ss_dssp             TTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC-CCCCGGGTC
T ss_pred             CCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCC-CCCCHHHHC
Confidence            8555999999999999999999999999999999999999999999999988766433322222211111 112334556


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSA  318 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (395)
                      +..++.+.+||.+||.+||.+|||++++|+||||...    +.                              +..+|..
T Consensus       278 ~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~----~~------------------------------~~~~~~~  323 (367)
T 1cm8_A          278 TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL----HD------------------------------TEDEPQV  323 (367)
T ss_dssp             TTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT----C------------------------------------CC
T ss_pred             CCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh----cC------------------------------CccCCCC
Confidence            7889999999999999999999999999999999752    11                              1112222


Q ss_pred             CCCCCchhHHhhhhhhHHhhHHHHHHHhhh
Q psy2865         319 PQPFDDTWERKLTSVQQVKEEMHKFIAEQL  348 (395)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~i~~~I~~~~  348 (395)
                      . +|+..++........|+..++.++..+.
T Consensus       324 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (367)
T 1cm8_A          324 Q-KYDDSFDDVDRTLDEWKRVTYKEVLSFK  352 (367)
T ss_dssp             C-CCCCC-----CCHHHHHHHHHHHHHTCC
T ss_pred             C-CCCCChhhhcCCHHHHHHHHHHHHHHhc
Confidence            2 3555555555667788888888877654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.5e-40  Score=330.86  Aligned_cols=169  Identities=21%  Similarity=0.206  Sum_probs=141.0

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +...|++..+++|++||+.||.|||+.|||||||||+||||+.+|.|||+|||+|+....   ....+.|||+.|||||+
T Consensus       285 ~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~---~~~~t~~GTp~YmAPEv  361 (689)
T 3v5w_A          285 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK---KKPHASVGTHGYMAPEV  361 (689)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS---CCCCSCCSCGGGCCHHH
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCC---CCCCCccCCcCccCHHH
Confidence            346799999999999999999999999999999999999999999999999999987643   23456799999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...|+.++||||+|||+|||++|.+||.+.+..+....+...+                             .....
T Consensus       362 l~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~-----------------------------~~~~~  412 (689)
T 3v5w_A          362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----------------------------TMAVE  412 (689)
T ss_dssp             HSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH-----------------------------HCCCC
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc-----------------------------CCCCC
Confidence            9754459999999999999999999999998754433222211111                             01124


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCcc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGRL  277 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~~  277 (395)
                      ++..+++++.+||.+||..||.+|++     |+|+++||||.+..+
T Consensus       413 ~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW  458 (689)
T 3v5w_A          413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  458 (689)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCH
T ss_pred             CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCH
Confidence            56778999999999999999999998     899999999987544

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.4e-39  Score=310.14  Aligned_cols=230  Identities=31%  Similarity=0.445  Sum_probs=172.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...    ...+..++|++|+|||++.
T Consensus       127 ~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~----~~~~~~~~t~~y~aPE~~~  202 (367)
T 2fst_X          127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA----DEMTGYVATRWYRAPEIML  202 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------------------CCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc----ccCCCcCcCcCccChHHHc
Confidence            458888899999999999999999999999999999999999999999999998643    2355678999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...|+.++||||+||++|+|++|.+||.+.+..+++..|...+|.|+.+.+..+............... ....+....
T Consensus       203 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  281 (367)
T 2fst_X          203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM-PKMNFANVF  281 (367)
T ss_dssp             TCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCC-CCCCHHHHT
T ss_pred             CCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCC-CCCCHHHHC
Confidence            8556999999999999999999999999999999999999999999999888766433222222211111 111233445


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSA  318 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (395)
                      ...++.+.+||.+||.+||.+|||+.++|+||||...    +.                              +..+|.+
T Consensus       282 ~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~----~~------------------------------~~~~~~~  327 (367)
T 2fst_X          282 IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY----HD------------------------------PDDEPVA  327 (367)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT----CC------------------------------GGGCCCC
T ss_pred             CCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc----cC------------------------------CCCCCCC
Confidence            6789999999999999999999999999999999752    11                              1122333


Q ss_pred             CCCCCchhHHhhhhhhHHhhHHHHHHHhhh
Q psy2865         319 PQPFDDTWERKLTSVQQVKEEMHKFIAEQL  348 (395)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~i~~~I~~~~  348 (395)
                      + +|+...+........|+..++.++..+.
T Consensus       328 ~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~  356 (367)
T 2fst_X          328 D-PYDQSLESRDLLIDEWKSLTYDEVISFV  356 (367)
T ss_dssp             C-CCCGGGSSCCCCHHHHHHHHHHHHHHCC
T ss_pred             C-CCCcchhhccCCHHHHHHHHHHHHHHhc
Confidence            2 4555555555566788888888887764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3.7e-39  Score=316.49  Aligned_cols=196  Identities=34%  Similarity=0.551  Sum_probs=154.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-------------------  139 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-------------------  139 (395)
                      ..+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+.......                   
T Consensus       151 ~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (458)
T 3rp9_A          151 VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF  230 (458)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccc
Confidence            4588899999999999999999999999999999999999999999999999987542211                   


Q ss_pred             -------CCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHc-----------CCCCCCCCC-----------
Q psy2865         140 -------KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG-----------RRILFQAQS-----------  190 (395)
Q Consensus       140 -------~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~-----------g~~~f~~~~-----------  190 (395)
                             ...+.++||++|+|||++++...|+.++||||||||+|||++           |.++|.|.+           
T Consensus       231 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~  310 (458)
T 3rp9_A          231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAG  310 (458)
T ss_dssp             --------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------
T ss_pred             cccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccccccccccc
Confidence                   235667899999999998765569999999999999999998           889998765           


Q ss_pred             ---------hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCc
Q psy2865         191 ---------PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRI  261 (395)
Q Consensus       191 ---------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~  261 (395)
                               ..+++..|.+++|.|+.+.+................. .....+....+..++.+.+||.+||.+||.+||
T Consensus       311 ~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~  389 (458)
T 3rp9_A          311 NDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPK-REGTDLAERFPASSADAIHLLKRMLVFNPNKRI  389 (458)
T ss_dssp             ------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCC-CCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             ccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCC-CCCCCHHHHCCCCCHHHHHHHHHHhccCccccC
Confidence                     3688999999999999998876643332222221111 112233455677899999999999999999999


Q ss_pred             CHHHHHcCCccccC
Q psy2865         262 SVNSALCHPYLDEG  275 (395)
Q Consensus       262 ta~e~L~Hp~f~~~  275 (395)
                      |++|+|+||||...
T Consensus       390 t~~e~L~Hp~f~~~  403 (458)
T 3rp9_A          390 TINECLAHPFFKEV  403 (458)
T ss_dssp             CHHHHHHSGGGTTT
T ss_pred             CHHHHhcCHhhhhc
Confidence            99999999999863

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.7e-39  Score=318.91  Aligned_cols=192  Identities=33%  Similarity=0.564  Sum_probs=151.1

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....  ....+..+||++|+|||++.+
T Consensus       160 ~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~~~  237 (464)
T 3ttj_A          160 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG  237 (464)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-------CCCC----CCCTTCCHHHHTT
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC--CcccCCCcccccccCHHHHcC
Confidence            377888889999999999999999999999999999999999999999999987543  234567899999999999998


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC-ccchhhc--
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ-SLSSLYS--  236 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--  236 (395)
                      .. |+.++||||+|||+|+|++|.+||.+.+..+++..|.+.+|.|.++.+..............+.... .+...+.  
T Consensus       238 ~~-~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (464)
T 3ttj_A          238 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS  316 (464)
T ss_dssp             CC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGG
T ss_pred             CC-CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccc
Confidence            76 9999999999999999999999999999999999999999999999887664433332222111110 1111110  


Q ss_pred             cCC-------CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSS-------QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~-------~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+       ..++.+.+||.+||.+||.+||||+|+|+||||..
T Consensus       317 ~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          317 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             GSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            000       11567999999999999999999999999999975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=6.5e-39  Score=312.35  Aligned_cols=195  Identities=31%  Similarity=0.536  Sum_probs=156.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-------------------  139 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-------------------  139 (395)
                      ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......                   
T Consensus       124 ~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (432)
T 3n9x_A          124 IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN  203 (432)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC------------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccc
Confidence            4588999999999999999999999999999999999999999999999999987543211                   


Q ss_pred             --CCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHc-----------CCCCCCCCC----------------
Q psy2865         140 --KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLG-----------RRILFQAQS----------------  190 (395)
Q Consensus       140 --~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~-----------g~~~f~~~~----------------  190 (395)
                        ..++.++||++|+|||++++...|+.++||||+|||+|||++           |.++|.|.+                
T Consensus       204 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~  283 (432)
T 3n9x_A          204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEK  283 (432)
T ss_dssp             -------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHH
T ss_pred             hhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCccccccccccc
Confidence              234778999999999998766669999999999999999997           677777765                


Q ss_pred             -hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         191 -PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       191 -~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                       ..+++..|.+++|.|+.+.+..+............... ....+....+..++.+.+||.+||.+||.+||||+|+|+|
T Consensus       284 ~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  362 (432)
T 3n9x_A          284 SNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHR-KPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDH  362 (432)
T ss_dssp             HHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC-CCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred             chHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCC-CCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence             47899999999999999988776443332222221111 1112334456789999999999999999999999999999


Q ss_pred             Ccccc
Q psy2865         270 PYLDE  274 (395)
Q Consensus       270 p~f~~  274 (395)
                      |||..
T Consensus       363 p~f~~  367 (432)
T 3n9x_A          363 PYLKD  367 (432)
T ss_dssp             GGGTT
T ss_pred             hhhhh
Confidence            99986

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.6e-39  Score=324.25  Aligned_cols=166  Identities=22%  Similarity=0.305  Sum_probs=145.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC--CCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT--YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~--~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ..|++..++.++.||+.||.|||+.||+||||||+|||++.+  +.+||+|||+|+.+..  .......+||+.|||||+
T Consensus       250 ~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~--~~~~~~~~GT~~y~APEv  327 (573)
T 3uto_A          250 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP--KQSVKVTTGTAEFAAPEV  327 (573)
T ss_dssp             SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT--TSEEEEECSSGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC--CCceeeeEECccccCHHH
Confidence            568999999999999999999999999999999999999854  8999999999998653  344566799999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.+ |+.++||||+|||+|+|++|.+||.+.+..+++..|......++.                            .
T Consensus       328 ~~~~~-y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~----------------------------~  378 (573)
T 3uto_A          328 AEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD----------------------------S  378 (573)
T ss_dssp             HTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCS----------------------------G
T ss_pred             hCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCc----------------------------c
Confidence            99876 899999999999999999999999999998888888653322211                            2


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      .+..+++.+.|||.+||..||.+||||.|+|+||||..+
T Consensus       379 ~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~  417 (573)
T 3uto_A          379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG  417 (573)
T ss_dssp             GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCC
Confidence            335678999999999999999999999999999999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.6e-39  Score=298.69  Aligned_cols=156  Identities=24%  Similarity=0.311  Sum_probs=116.2

Q ss_pred             CCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-----------CCcccccccccccc
Q psy2865          85 RKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-----------KAMTQEVVTQYYRA  153 (395)
Q Consensus        85 ~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-----------~~~~~~~~t~~y~a  153 (395)
                      .+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+.......           ...+..+||+.|||
T Consensus       119 ~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmA  198 (299)
T 4g31_A          119 VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS  198 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccC
Confidence            3678999999999999999999999999999999999999999999987643211           12355789999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+.. |+.++|||||||++|||++   ||.+.  .+....+..+.....+.                         
T Consensus       199 PE~~~~~~-y~~~~DiwSlGvilyell~---Pf~~~--~~~~~~~~~~~~~~~p~-------------------------  247 (299)
T 4g31_A          199 PEQIHGNS-YSHKVDIFSLGLILFELLY---PFSTQ--MERVRTLTDVRNLKFPP-------------------------  247 (299)
T ss_dssp             HHHHTTCC-CCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHHHHHHHTTCCCH-------------------------
T ss_pred             HHHHcCCC-CCCHHHHHHHHHHHHHHcc---CCCCc--cHHHHHHHHHhcCCCCC-------------------------
Confidence            99999876 9999999999999999996   66543  23333332221111110                         


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                         .+...++.+.+||.+||..||.+||||.|+|+||||.+
T Consensus       248 ---~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          248 ---LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             ---HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             ---CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence               11233567789999999999999999999999999986

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.8e-37  Score=295.60  Aligned_cols=195  Identities=34%  Similarity=0.566  Sum_probs=160.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......  ...+..+||+.|+|||+
T Consensus       123 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  202 (364)
T 3qyz_A          123 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI  202 (364)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHH
Confidence            4588889999999999999999999999999999999999999999999999987543211  22455689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...++.++||||+||++|+|++|.+||.+.+..+++..|...+|.|+.+.+.................. .......
T Consensus       203 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  281 (364)
T 3qyz_A          203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK-NKVPWNR  281 (364)
T ss_dssp             HHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC-CCCCHHH
T ss_pred             hcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCc-cCCCHHH
Confidence            877666899999999999999999999999999999999999999999999887765332222111111111 1112334


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..++.+.+||.+||.+||.+|||+.|+|+||||..
T Consensus       282 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  319 (364)
T 3qyz_A          282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  319 (364)
T ss_dssp             HCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             hCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence            55678999999999999999999999999999999976

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.4e-38  Score=290.35  Aligned_cols=165  Identities=16%  Similarity=0.131  Sum_probs=130.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-CCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-PNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+..... .....+..+||+.|||||++
T Consensus       127 ~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l  206 (307)
T 3omv_A          127 TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI  206 (307)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHh
Confidence            46888889999999999999999999999999999999999999999999999875432 22345567999999999999


Q ss_pred             hcC--CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGA--RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~--~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+.  ..|+.++|||||||++|||+||.+||.+.+....+..++.....++                          .+.
T Consensus       207 ~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p--------------------------~~~  260 (307)
T 3omv_A          207 RMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP--------------------------DLS  260 (307)
T ss_dssp             HCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCC--------------------------CST
T ss_pred             hccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC--------------------------Ccc
Confidence            753  2489999999999999999999999998776666555443111100                          112


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+..+++.+.+||.+||..||++|||+.|++.+
T Consensus       261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            3456788999999999999999999999987553

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=4.2e-37  Score=295.99  Aligned_cols=192  Identities=26%  Similarity=0.480  Sum_probs=159.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+|||+|+....  ......+++|+.|+|||+
T Consensus       135 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~--~~~~~~~~~t~~y~aPE~  212 (394)
T 4e7w_A          135 KQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA--GEPNVSYICSRYYRAPEL  212 (394)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT--TCCCCSSCSCGGGCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC--CCCCcccccCcCccCHHH
Confidence            45678888999999999999999999999999999999999 799999999999987643  233456789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...|+.++||||+||++|+|++|.+||.+.+..+++..|...+|.|+.+.+.............. .....  ....
T Consensus       213 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~  289 (394)
T 4e7w_A          213 IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQ-IRPHP--FSKV  289 (394)
T ss_dssp             HTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCC-CCCCC--HHHH
T ss_pred             HcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhcccc-ccCCc--HHHh
Confidence            98876699999999999999999999999999999999999999999999988766533221111100 00111  1122


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ++...++.+.+||.+||.+||.+|||+.++|+||||..
T Consensus       290 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (394)
T 4e7w_A          290 FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE  327 (394)
T ss_dssp             SCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred             ccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence            44568899999999999999999999999999999986

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.4e-37  Score=288.37  Aligned_cols=193  Identities=33%  Similarity=0.502  Sum_probs=157.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... ....+..++|+.|+|||++.
T Consensus       114 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~t~~y~aPE~~~  192 (311)
T 3niz_A          114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYTHEVVTLWYRAPDVLM  192 (311)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC-CC---CCCCCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC-cccccCCcccCCcCCHHHhc
Confidence            45788889999999999999999999999999999999999999999999999876432 23345568899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...|+.++||||+||++|+|++|.+||.+.+..+++..|...+|.+.+..|............  ..............
T Consensus       193 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  270 (311)
T 3niz_A          193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR--TFQVFEKKPWSSII  270 (311)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC--CCCCCCCCCHHHHS
T ss_pred             CCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc--ccccccCCcHHHhC
Confidence            7666899999999999999999999999999999999999999999988776654322211100  00001111233455


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +..++++.+||.+||.+||.+|||+.|+|+||||.+
T Consensus       271 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  306 (311)
T 3niz_A          271 PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD  306 (311)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cccCHHHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence            678899999999999999999999999999999986

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=6.6e-37  Score=292.38  Aligned_cols=190  Identities=31%  Similarity=0.477  Sum_probs=155.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...    ...+..++|+.|+|||++.+
T Consensus       140 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~----~~~~~~~~t~~y~aPE~~~~  215 (371)
T 4exu_A          140 EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPEVILS  215 (371)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC------------CTTCCCTTSCHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc----cCcCCcccCccccCHHHhcC
Confidence            48888899999999999999999999999999999999999999999999998643    23456689999999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      ...++.++|||||||++|+|++|.+||.+.+..+++..+....|.++.+.+................. .....+...++
T Consensus       216 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  294 (371)
T 4exu_A          216 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQ-TPRKDFTQLFP  294 (371)
T ss_dssp             CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCC-CCCCCHHHHST
T ss_pred             CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCC-CcchhHHHhcc
Confidence            55589999999999999999999999999999999999999999999887765543322222211111 11223345567


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++.+.+||.+||.+||.+|||+.|+|+||||..
T Consensus       295 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  329 (371)
T 4exu_A          295 RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  329 (371)
T ss_dssp             TSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             ccChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence            78999999999999999999999999999999975

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=6.4e-37  Score=297.86  Aligned_cols=190  Identities=24%  Similarity=0.342  Sum_probs=153.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC--eEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS--SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~--vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .+++..++.++.||+.||.|||+.||+||||||+|||++.++.  +||+|||+|+...    ......+||+.|+|||++
T Consensus       196 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~----~~~~~~~gt~~y~aPE~~  271 (429)
T 3kvw_A          196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH----QRVYTYIQSRFYRAPEVI  271 (429)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT----CCCCSSCSCGGGCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC----CcccccCCCCCccChHHH
Confidence            4788888999999999999999999999999999999999887  9999999998743    234557899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcccc----------
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK----------  227 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------  227 (395)
                      .+.. |+.++|||||||++|+|++|.+||.+.+..+++..|.+.+|.|+...+.................          
T Consensus       272 ~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (429)
T 3kvw_A          272 LGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDG  350 (429)
T ss_dssp             HTBC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC-
T ss_pred             hCCC-CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccc
Confidence            9876 89999999999999999999999999999999999999999999987754422211110000000          


Q ss_pred             ----------------CC-ccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         228 ----------------SQ-SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       228 ----------------~~-~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                                      .. .......+....++.+.+||.+||.+||.+||||.|+|+||||..
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~  414 (429)
T 3kvw_A          351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR  414 (429)
T ss_dssp             -CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-
T ss_pred             cccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhcc
Confidence                            00 000011223456889999999999999999999999999999975

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=4.8e-37  Score=298.03  Aligned_cols=192  Identities=28%  Similarity=0.448  Sum_probs=157.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-CCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.+ +.+||+|||+|+.....  .....+++|++|+|||+
T Consensus       150 ~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~--~~~~~~~~t~~y~aPE~  227 (420)
T 1j1b_A          150 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPEL  227 (420)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT--CCCCSCCSCTTSCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccC--CCceeeeeCCCcCCHHH
Confidence            4567888899999999999999999999999999999999965 56899999999875432  23456789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...|+.++||||||||+|||++|.+||.+.+..+++..|+..+|.|..+.+.............. .....+.  ..
T Consensus       228 ~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~-~~~~~~~--~~  304 (420)
T 1j1b_A          228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQ-IKAHPWT--KV  304 (420)
T ss_dssp             HTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCC-CCCCCHH--HH
T ss_pred             HcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCc-cCCCCHH--Hh
Confidence            98765699999999999999999999999999999999999999999999988876532211110000 0001111  12


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +....++.+.+||.+||.+||.+|||+.|+|+||||..
T Consensus       305 ~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          305 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             SCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             cCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence            34567899999999999999999999999999999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.7e-37  Score=285.21  Aligned_cols=186  Identities=32%  Similarity=0.488  Sum_probs=155.3

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      +++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....  ....+..+||+.|+|||++.+.
T Consensus       117 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE~~~~~  194 (308)
T 3g33_A          117 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALTPVVVTLWYRAPEVLLQS  194 (308)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTT--CCCSGGGGCCCSSCCHHHHHTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCC--CcccCCccccccccCchHHcCC
Confidence            88889999999999999999999999999999999999999999999999986542  2344567899999999999887


Q ss_pred             CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCC
Q psy2865         161 RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQ  240 (395)
Q Consensus       161 ~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (395)
                      . |+.++|||||||++|+|++|.+||.+.+..+++..|...+|.++...|+........     ..............+.
T Consensus       195 ~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  268 (308)
T 3g33_A          195 T-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-----AFPPRGPRPVQSVVPE  268 (308)
T ss_dssp             C-CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGG-----GSCCCCCCCHHHHSCS
T ss_pred             C-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcccc-----ccCCCCCCcHHHhCcc
Confidence            6 899999999999999999999999999999999999999998887665433211110     0011112223345677


Q ss_pred             CCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         241 ATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       241 ~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .+..+.+||.+||.+||.+|||+.|+|+||||..
T Consensus       269 ~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~  302 (308)
T 3g33_A          269 MEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK  302 (308)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred             ccHHHHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence            8999999999999999999999999999999975

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.9e-36  Score=287.24  Aligned_cols=190  Identities=31%  Similarity=0.483  Sum_probs=154.4

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++...    ...+..++|+.|+|||++.+
T Consensus       122 ~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~----~~~~~~~~t~~y~aPE~~~~  197 (353)
T 3coi_A          122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPEVILS  197 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC------------CCSBCCSCHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC----CCccccccCcCcCCHHHHhC
Confidence            37888888999999999999999999999999999999999999999999998643    23455688999999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      ...++.++|||||||++|+|++|..||.+.+..+++..+....|.++.+.+.................. ....+....+
T Consensus       198 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  276 (353)
T 3coi_A          198 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT-PRKDFTQLFP  276 (353)
T ss_dssp             CSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBC-SSCCTTTTCT
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCC-CCccHHHhcC
Confidence            555899999999999999999999999999999999999999999998877665433222222111111 1112334556


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       277 ~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  311 (353)
T 3coi_A          277 RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  311 (353)
T ss_dssp             TSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             CcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            78999999999999999999999999999999975

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.9e-37  Score=288.57  Aligned_cols=195  Identities=28%  Similarity=0.432  Sum_probs=154.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......++|+.|+|||++
T Consensus        94 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~t~~y~aPE~~  172 (324)
T 3mtl_A           94 GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP-TKTYDNEVVTLWYRPPDIL  172 (324)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------------CGGGCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC-ccccccccCcccccChhhh
Confidence            345778888899999999999999999999999999999999999999999999865432 2334556889999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...|+.++||||+||++|+|++|.+||.+.+..+++..|...+|.|....|+..............  ..........
T Consensus       173 ~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  250 (324)
T 3mtl_A          173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP--KYRAEALLSH  250 (324)
T ss_dssp             TTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCC--CCCCCCHHHH
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccc--cccchhhhhh
Confidence            88656899999999999999999999999999999999999999999988877655332221111111  1112233445


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      .+..++.+.+||.+||.+||.+|||++|+|+||||...
T Consensus       251 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          251 APRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             cCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence            66789999999999999999999999999999999863

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=9.6e-37  Score=285.01  Aligned_cols=194  Identities=29%  Similarity=0.438  Sum_probs=155.4

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......++|+.|+|||++.+
T Consensus       104 ~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~  182 (317)
T 2pmi_A          104 GLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPDVLMG  182 (317)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC-CCCCCCCCSCCTTCCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCC-cccCCCCcccccccCchHhhC
Confidence            4777788889999999999999999999999999999999999999999999876432 233455689999999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh--hcc
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL--YSL  237 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  237 (395)
                      ...|+.++|||||||++|+|++|.+||.+.+..+++..|...+|.++...|....................+...  ...
T Consensus       183 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (317)
T 2pmi_A          183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT  262 (317)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccc
Confidence            655899999999999999999999999999999999999999999887766554322111000000000111111  123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       263 ~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  299 (317)
T 2pmi_A          263 KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE  299 (317)
T ss_dssp             SSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             cccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence            3467899999999999999999999999999999976

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1e-36  Score=281.40  Aligned_cols=193  Identities=30%  Similarity=0.417  Sum_probs=156.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......++|+.|+|||++
T Consensus        95 ~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~t~~y~aPE~~  173 (292)
T 3o0g_A           95 NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVL  173 (292)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC-CSCCCSCCSCGGGCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc-cccccCCccccCCcChHHH
Confidence            456888999999999999999999999999999999999999999999999999876432 2344556899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCC-CCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRR-ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~-~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+...|+.++||||+||++|+|++|. ++|.+.+..+++..+...+|.+....|..........   .............
T Consensus       174 ~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  250 (292)
T 3o0g_A          174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK---PYPMYPATTSLVN  250 (292)
T ss_dssp             TTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC---CCCCCCTTCCCTT
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc---ccccccCCcchhh
Confidence            88766899999999999999999665 5578888889999999999998887665443211110   0011111122334


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..++.+.+||.+||..||.+|||++|+|+||||.+
T Consensus       251 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  288 (292)
T 3o0g_A          251 VVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             cccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence            55678999999999999999999999999999999975

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1e-36  Score=294.53  Aligned_cols=198  Identities=29%  Similarity=0.427  Sum_probs=147.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee----cCCCCeEEeeCCcccccCCCC--CCCcccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY----QATYSSKICDFGLARVEEPDP--NKAMTQEVVTQYY  151 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~----~~~~~vKl~DFGla~~~~~~~--~~~~~~~~~t~~y  151 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||+    +.++.+||+|||+|+......  .......+||+.|
T Consensus       122 ~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y  201 (405)
T 3rgf_A          122 PVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY  201 (405)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTT
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcc
Confidence            3458899999999999999999999999999999999999    677899999999998754321  1234557899999


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh---------HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP---------VQQLGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~---------~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                      +|||++.+...|+.++|||||||++|+|++|.+||.+...         .+++..|...+|.|+...|..+.........
T Consensus       202 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~  281 (405)
T 3rgf_A          202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTL  281 (405)
T ss_dssp             CCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHH
T ss_pred             cCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhh
Confidence            9999998866689999999999999999999999987654         5889999999999998877655322111111


Q ss_pred             h-c----cccCCc-cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         223 R-Q----TRKSQS-LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       223 ~-~----~~~~~~-~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      . .    ...... ...+.......++.+.+||.+||.+||.+||||+|+|+||||...
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~  340 (405)
T 3rgf_A          282 MKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED  340 (405)
T ss_dssp             HHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred             hhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence            0 0    000001 111112233457789999999999999999999999999999864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.2e-36  Score=280.33  Aligned_cols=192  Identities=31%  Similarity=0.426  Sum_probs=150.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... ....+..++|+.|+|||++.
T Consensus        95 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~t~~y~aPE~~~  173 (288)
T 1ob3_A           95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-VRKYTHEIVTLWYRAPDVLM  173 (288)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc-ccccccccccccccCchhee
Confidence            45777888899999999999999999999999999999999999999999999875432 22345568899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+++..+...+|.+....|+...........   .............
T Consensus       174 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  250 (288)
T 1ob3_A          174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN---FTVYEPLPWESFL  250 (288)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT---CCCCCCCCGGGTC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc---cccccCccHHHHh
Confidence            7656899999999999999999999999999999999999998888876655443221110000   0000011122345


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+|||++|+|+||||.+
T Consensus       251 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             hhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            678899999999999999999999999999999975

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.4e-37  Score=290.37  Aligned_cols=160  Identities=18%  Similarity=0.213  Sum_probs=134.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.+||||||||+|||++.++.+||+|||+|+....+... ..+..+||+.|||||++
T Consensus       180 ~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l  259 (353)
T 4ase_A          180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  259 (353)
T ss_dssp             TCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHH
Confidence            45788888999999999999999999999999999999999999999999999976443222 33456889999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|||+| |.+||.+.+....+..++.. |                             ....
T Consensus       260 ~~~~-y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~-g-----------------------------~~~~  308 (353)
T 4ase_A          260 FDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-G-----------------------------TRMR  308 (353)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH-T-----------------------------CCCC
T ss_pred             hcCC-CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc-C-----------------------------CCCC
Confidence            9876 9999999999999999998 99999987654444433221 1                             0123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+..+++.+.+||.+||..||.+|||+.|+++|
T Consensus       309 ~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            456788999999999999999999999999987

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.1e-36  Score=290.93  Aligned_cols=192  Identities=32%  Similarity=0.549  Sum_probs=143.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....  ....+..+||+.|+|||++.+
T Consensus       123 ~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE~~~~  200 (371)
T 2xrw_A          123 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG  200 (371)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC------------------CTTCCHHHHTT
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccc--ccccCCceecCCccCHHHhcC
Confidence            477888889999999999999999999999999999999999999999999986542  223456789999999999998


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc-cCCccchhhc--
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR-KSQSLSSLYS--  236 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--  236 (395)
                      .. |+.++||||+||++|+|++|.+||.+.+..+++..|...+|.|.++.+..............+. ....+...+.  
T Consensus       201 ~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (371)
T 2xrw_A          201 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV  279 (371)
T ss_dssp             CC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGG
T ss_pred             CC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccc
Confidence            76 8999999999999999999999999999999999999999999998776553322222111111 0001111110  


Q ss_pred             -cC------CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 -LS------SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 -~~------~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ++      ...+..+.+||.+||.+||.+|||++|+|+||||..
T Consensus       280 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          280 LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             GSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence             01      112568999999999999999999999999999975

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.2e-36  Score=288.87  Aligned_cols=194  Identities=26%  Similarity=0.452  Sum_probs=160.1

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||+|+....  .......++|+.|+|||
T Consensus       134 ~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~t~~y~aPE  211 (383)
T 3eb0_A          134 SGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP--SEPSVAYICSRFYRAPE  211 (383)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT--TSCCCCCCCCSSCCCHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC--CCCCcCcccCCCccCHH
Confidence            345688889999999999999999999999999999999998 688999999999987543  23445678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+...|+.++||||+||++|+|++|.+||.+.+..+++..|+..+|.|+.+.+.............. .....+  ..
T Consensus       212 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~--~~  288 (383)
T 3eb0_A          212 LMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT-LKAKDW--RK  288 (383)
T ss_dssp             HHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCC-CCCCCH--HH
T ss_pred             HhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCc-cCcccH--Hh
Confidence            998876689999999999999999999999999999999999999999999988766533221111000 001111  12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      .++...++.+.+||.+||.+||.+|||+.|+|+||||...
T Consensus       289 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          289 ILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             HSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             hCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence            3456688999999999999999999999999999999764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.5e-36  Score=283.36  Aligned_cols=163  Identities=19%  Similarity=0.292  Sum_probs=142.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|.....  .......+||+.|+|||++
T Consensus       108 ~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~  185 (328)
T 3fe3_A          108 HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV--GGKLDAFCGAPPYAAPELF  185 (328)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS--SCGGGTTSSSGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC--CCccccccCCcceeCcccc
Confidence            35688889999999999999999999999999999999999999999999999987543  2345667999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|.+||.+.+.......+...                                .+.+
T Consensus       186 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  233 (328)
T 3fe3_A          186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG--------------------------------KYRI  233 (328)
T ss_dssp             HTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCCC
T ss_pred             cCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            98774458999999999999999999999998877766666431                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +...++.+.+||.+||..||.+|||++|+|+||||..
T Consensus       234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~  270 (328)
T 3fe3_A          234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA  270 (328)
T ss_dssp             CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred             CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence            4567899999999999999999999999999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.2e-36  Score=283.50  Aligned_cols=191  Identities=30%  Similarity=0.428  Sum_probs=157.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... ....+..++|+.|+|||++.
T Consensus       107 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~t~~y~aPE~~~  185 (346)
T 1ua2_A          107 LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP-NRAYTHQVVTRWYRAPELLF  185 (346)
T ss_dssp             SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-CCCCCCSCCCCTTCCHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC-cccCCcccccccccCchHhh
Confidence            45889999999999999999999999999999999999999999999999999876432 23455668999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...|+.++|||||||++|+|++|.+||.+.+..+++..|...+|.+..+.|+..+.........    ...........
T Consensus       186 ~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  261 (346)
T 1ua2_A          186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK----SFPGIPLHHIF  261 (346)
T ss_dssp             TCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC----CCCCCCHHHHC
T ss_pred             CCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccccc----ccCCCChHHhh
Confidence            76568999999999999999999999999999999999999999988877665543222110000    00011122344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       262 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~  297 (346)
T 1ua2_A          262 SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN  297 (346)
T ss_dssp             TTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             ccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence            678899999999999999999999999999999976

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.6e-37  Score=283.30  Aligned_cols=163  Identities=17%  Similarity=0.232  Sum_probs=137.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.+||||||||+|||++.++.+||+|||+|+....... ......+||+.|||||+
T Consensus       122 ~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~  201 (299)
T 4asz_A          122 PTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPES  201 (299)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHH
Confidence            34688899999999999999999999999999999999999999999999999986543221 12234578999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||+| |.+||.+.+..+.+..|....                               ..
T Consensus       202 ~~~~~-~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~-------------------------------~~  249 (299)
T 4asz_A          202 IMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-------------------------------VL  249 (299)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTC-------------------------------CC
T ss_pred             HcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            99876 9999999999999999998 899999988877777665411                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+..+++.+.+||.+||..||++|||+.++  |+|++.
T Consensus       250 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~  286 (299)
T 4asz_A          250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQN  286 (299)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHH
T ss_pred             CCCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHH
Confidence            3456788999999999999999999999999  457754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=9.2e-37  Score=282.47  Aligned_cols=159  Identities=16%  Similarity=0.187  Sum_probs=135.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-CCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-PNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.+||||||||+|||++.++.+||+|||+|+..... .....+..+||+.|||||++
T Consensus       140 ~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l  219 (308)
T 4gt4_A          140 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI  219 (308)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHH
Confidence            34677778899999999999999999999999999999999999999999999865332 22334567899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|||+| |.+||.+.+..+.+..|....                               ...
T Consensus       220 ~~~~-~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~-------------------------------~~~  267 (308)
T 4gt4_A          220 MYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ-------------------------------VLP  267 (308)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTC-------------------------------CCC
T ss_pred             hCCC-CCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------CCC
Confidence            9876 9999999999999999998 899999998877776664311                               113


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+..+++.+.+|+.+||..||.+|||+.|++++
T Consensus       268 ~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          268 CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            456788999999999999999999999999874

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=283.44  Aligned_cols=160  Identities=15%  Similarity=0.163  Sum_probs=129.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.+||||||||+|||++.++.+||+|||+|+...... ....+..+||+.|||||+
T Consensus       152 ~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~  231 (329)
T 4aoj_A          152 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES  231 (329)
T ss_dssp             CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhh
Confidence            3568888899999999999999999999999999999999999999999999998754322 223345689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||+| |..||.+.+..+.+..|....                               ..
T Consensus       232 ~~~~~-~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~-------------------------------~~  279 (329)
T 4aoj_A          232 ILYRK-FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR-------------------------------EL  279 (329)
T ss_dssp             HTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC-------------------------------CC
T ss_pred             hcCCC-CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            99876 9999999999999999998 899999988877777665421                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+..+++.+.+||.+||..||++|||+.|++.+
T Consensus       280 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            3456788999999999999999999999999864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.1e-36  Score=286.65  Aligned_cols=165  Identities=23%  Similarity=0.292  Sum_probs=139.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||++
T Consensus       118 ~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~  196 (353)
T 3txo_A          118 SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-GVTTATFCGTPDYIAPEIL  196 (353)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----------CCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC-CccccccCCCcCeEChhhc
Confidence            456899999999999999999999999999999999999999999999999999864322 2344567899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++|||||||++|+|++|.+||.+.+..+.+..|...                                ...+
T Consensus       197 ~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  243 (353)
T 3txo_A          197 QEML-YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--------------------------------EVVY  243 (353)
T ss_dssp             HHHH-CTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCCC
T ss_pred             CCCC-cCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            8876 899999999999999999999999999988887777541                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH------HHHHcCCccccCc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV------NSALCHPYLDEGR  276 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta------~e~L~Hp~f~~~~  276 (395)
                      +...++.+.+||.+||..||.+|+++      .++++||||.+..
T Consensus       244 p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          244 PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence            45678899999999999999999998      8999999998744

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1e-35  Score=282.67  Aligned_cols=194  Identities=30%  Similarity=0.482  Sum_probs=157.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcc--ccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDST--IDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH--~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||  +.||+||||||+|||++. ++.+||+|||+|+.....  ......+||+.|+||
T Consensus       123 ~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aP  200 (360)
T 3e3p_A          123 QVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS--EPNVAYICSRYYRAP  200 (360)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTT--SCCCSTTSCGGGCCH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCC--CCcccccCCcceeCH
Confidence            445677778889999999999999  999999999999999996 899999999999876432  234456889999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch-
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS-  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  233 (395)
                      |++.+...++.++|||||||++|+|++|.+||.+.+...++..+...+|.++.+.+............... ....+.. 
T Consensus       201 E~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  279 (360)
T 3e3p_A          201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNS-KGIPWSNV  279 (360)
T ss_dssp             HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCC-CCCCHHHH
T ss_pred             HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcccccc-ccCCcccc
Confidence            99987666899999999999999999999999999999999999999999999887765432221111110 1111111 


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +.......++.+.+||.+||.+||.+|||+.|+|+||||..
T Consensus       280 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  320 (360)
T 3e3p_A          280 FSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE  320 (360)
T ss_dssp             TTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred             cchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence            12233446789999999999999999999999999999986

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.1e-36  Score=285.47  Aligned_cols=195  Identities=26%  Similarity=0.373  Sum_probs=154.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC---CCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD---PNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~---~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.....   .....+..+||+.|+|||
T Consensus       119 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  198 (351)
T 3mi9_A          119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPE  198 (351)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCch
Confidence            45788889999999999999999999999999999999999999999999999875422   122345568899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC-ccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ-SLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  234 (395)
                      ++.+...|+.++|||||||++|+|++|.+||.+.+...++..|....|.+++..|+.................. .....
T Consensus       199 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (351)
T 3mi9_A          199 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDR  278 (351)
T ss_dssp             HHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHH
T ss_pred             hhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHH
Confidence            99876668999999999999999999999999999999999999999998887665543222111111000000 00000


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      . .....++.+.+||.+||.+||.+|||++|+|+||||..
T Consensus       279 ~-~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  317 (351)
T 3mi9_A          279 L-KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  317 (351)
T ss_dssp             H-HHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred             h-hhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence            0 00123678999999999999999999999999999975

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.2e-35  Score=282.55  Aligned_cols=194  Identities=28%  Similarity=0.471  Sum_probs=153.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....  ....+..++|+.|+|||++.
T Consensus       129 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~t~~y~aPE~~~  206 (362)
T 3pg1_A          129 IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA--DANKTHYVTHRWYRAPELVM  206 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-----------------CGGGCCHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccc--ccccceecccceecCcHHhc
Confidence            3578888999999999999999999999999999999999999999999999985432  23345568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+....|.+....+............................
T Consensus       207 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (362)
T 3pg1_A          207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVV  286 (362)
T ss_dssp             TCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHS
T ss_pred             CCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhC
Confidence            75558999999999999999999999999999999999999999999988766553332222222222222223344566


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +..++.+.+||.+||.+||.+|||+.++|+||||..
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  322 (362)
T 3pg1_A          287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES  322 (362)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence            778999999999999999999999999999999986

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=6.2e-36  Score=283.42  Aligned_cols=195  Identities=30%  Similarity=0.493  Sum_probs=151.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---------CCcccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---------KAMTQEVVTQ  149 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---------~~~~~~~~t~  149 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......         ......+||+
T Consensus       107 ~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~  186 (353)
T 2b9h_A          107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR  186 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCG
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccc
Confidence            4688888999999999999999999999999999999999999999999999987543211         1233468899


Q ss_pred             cccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhh-hhhhhhhhccccC
Q psy2865         150 YYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACD-GAKCHMLRQTRKS  228 (395)
Q Consensus       150 ~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~  228 (395)
                      .|+|||++.+...++.++|||||||++|+|++|.+||.+.+...++..+....|.+.......... ............ 
T Consensus       187 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  265 (353)
T 2b9h_A          187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPM-  265 (353)
T ss_dssp             GGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCC-
T ss_pred             cccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccC-
Confidence            999999987655589999999999999999999999999999999999999888876432211100 000000000000 


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .....+...++..++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (353)
T 2b9h_A          266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT  311 (353)
T ss_dssp             CCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            0111223445678999999999999999999999999999999975

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.6e-35  Score=278.82  Aligned_cols=165  Identities=25%  Similarity=0.308  Sum_probs=142.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||++
T Consensus        99 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~  177 (337)
T 1o6l_A           99 ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVL  177 (337)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TCCBCCCEECGGGCCGGGG
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-CCcccccccChhhCChhhh
Confidence            456899999999999999999999999999999999999999999999999999864322 2345567999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++|||||||++|+|++|.+||.+.+....+..|...                                ...+
T Consensus       178 ~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  224 (337)
T 1o6l_A          178 EDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--------------------------------EIRF  224 (337)
T ss_dssp             SSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCCC
T ss_pred             cCCC-CCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            8876 899999999999999999999999988877666665431                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      +...++.+.+||.+||..||.+||     ++.++++||||....
T Consensus       225 p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence            566789999999999999999999     999999999998643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=5.1e-36  Score=281.58  Aligned_cols=195  Identities=33%  Similarity=0.454  Sum_probs=147.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-----CCCCeEEeeCCcccccCCCCCCCccccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-----ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYR  152 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-----~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~  152 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++     .++.+||+|||+|+..... ....+..++|+.|+
T Consensus       126 ~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~t~~y~  204 (329)
T 3gbz_A          126 NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP-IRQFTHEIITLWYR  204 (329)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------CCTTC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc-ccccCCCcCCcccc
Confidence            34588888999999999999999999999999999999995     4455999999999876432 23345568899999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      |||++.+...|+.++|||||||++|+|++|.+||.+.+..+++..+...+|.|....|....................+ 
T Consensus       205 aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  283 (329)
T 3gbz_A          205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTL-  283 (329)
T ss_dssp             CHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCH-
T ss_pred             CHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccH-
Confidence            9999988666899999999999999999999999999999999999999998887655433211110000000000011 


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                       ...+....++.+.+||.+||.+||.+|||+.|+|+||||...
T Consensus       284 -~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          284 -KRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             -HHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             -hhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence             112233478899999999999999999999999999999863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.1e-35  Score=280.63  Aligned_cols=189  Identities=20%  Similarity=0.293  Sum_probs=149.8

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-------------------------CCCeEEeeCCccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-------------------------TYSSKICDFGLARVE  134 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-------------------------~~~vKl~DFGla~~~  134 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.                         ++.+||+|||+|+..
T Consensus       133 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~  212 (360)
T 3llt_A          133 GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFK  212 (360)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEET
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceec
Confidence            4788888999999999999999999999999999999975                         788999999999864


Q ss_pred             CCCCCCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhh
Q psy2865         135 EPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHAC  214 (395)
Q Consensus       135 ~~~~~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~  214 (395)
                      .    ......+||+.|+|||++.+.. |+.++|||||||++|+|++|.+||.+.+..+.+..+....+.++...+....
T Consensus       213 ~----~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~  287 (360)
T 3llt_A          213 S----DYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEAT  287 (360)
T ss_dssp             T----SCCCSCCSCGGGCCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHT
T ss_pred             C----CCCcCccCcccccCcHHHcCCC-CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhh
Confidence            3    2344568999999999999876 8999999999999999999999999999999999999999988887665442


Q ss_pred             hhhhhhhhh------ccccCC-ccc-------hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         215 DGAKCHMLR------QTRKSQ-SLS-------SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       215 ~~~~~~~~~------~~~~~~-~~~-------~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      .........      .++... ...       .........++.+.+||.+||.+||.+||||.|+|+||||.
T Consensus       288 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          288 KTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            211111000      000000 000       00011223457889999999999999999999999999994

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.1e-35  Score=279.34  Aligned_cols=165  Identities=22%  Similarity=0.243  Sum_probs=142.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC----CeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY----SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~----~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++    .+||+|||+|.....  .......+||+.|+||
T Consensus       110 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~--~~~~~~~~gt~~y~aP  187 (361)
T 2yab_A          110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFGTPEFVAP  187 (361)
T ss_dssp             SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT--TCCCCCCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC--CCccccCCCCccEECc
Confidence            4688999999999999999999999999999999999998776    799999999987643  2334567899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. |+.++||||+||++|+|++|.+||.+.+..+.+..|.......+..                          
T Consensus       188 E~~~~~~-~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--------------------------  240 (361)
T 2yab_A          188 EIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEE--------------------------  240 (361)
T ss_dssp             HHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHH--------------------------
T ss_pred             hHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCch--------------------------
Confidence            9998765 8999999999999999999999999998888887776543322221                          


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        .+...+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       241 --~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          241 --FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             --HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             --hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence              23567889999999999999999999999999999975

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.7e-35  Score=282.53  Aligned_cols=166  Identities=22%  Similarity=0.340  Sum_probs=137.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+++++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.... ........+||+.|+|||++
T Consensus       147 ~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~-~~~~~~~~~gt~~Y~aPE~l  225 (396)
T 4dc2_A          147 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIAPEIL  225 (396)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-TTCCBCCCCBCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc-CCCccccccCCcccCCchhh
Confidence            45789999999999999999999999999999999999999999999999999986332 23345667999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh---------HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ---------QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS  228 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~---------~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (395)
                      .+.. |+.++|||||||++|||++|.+||.+....+         ....|..                            
T Consensus       226 ~~~~-~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~----------------------------  276 (396)
T 4dc2_A          226 RGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE----------------------------  276 (396)
T ss_dssp             TTCC-BCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH----------------------------
T ss_pred             cCCC-CChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc----------------------------
Confidence            9876 8999999999999999999999997542211         1111211                            


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCH------HHHHcCCccccCcc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISV------NSALCHPYLDEGRL  277 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta------~e~L~Hp~f~~~~~  277 (395)
                          ....++...++.+.+||.+||..||.+|+|+      +++++||||....+
T Consensus       277 ----~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w  327 (396)
T 4dc2_A          277 ----KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  327 (396)
T ss_dssp             ----CCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCH
T ss_pred             ----cccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCH
Confidence                1224556789999999999999999999985      89999999987543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=3.6e-35  Score=278.07  Aligned_cols=165  Identities=21%  Similarity=0.235  Sum_probs=142.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||++
T Consensus       115 ~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~  193 (353)
T 2i0e_A          115 VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTKTFCGTPDYIAPEII  193 (353)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBCCCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC-CcccccccCCccccChhhh
Confidence            356899999999999999999999999999999999999999999999999999864322 2334567899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++|||||||++|||++|.+||.+.+....+..|...                                ...+
T Consensus       194 ~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  240 (353)
T 2i0e_A          194 AYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--------------------------------NVAY  240 (353)
T ss_dssp             TTCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCCC
T ss_pred             cCCC-cCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            8876 899999999999999999999999998887777776541                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      +...++.+.+||.+||..||.+||     +++++++||||....
T Consensus       241 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~  284 (353)
T 2i0e_A          241 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  284 (353)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCC
Confidence            567889999999999999999999     479999999998643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=3.5e-35  Score=281.53  Aligned_cols=190  Identities=22%  Similarity=0.349  Sum_probs=147.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcc--ccCccccCCCCCceeec--CCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDST--IDGYQARQPTRQLVMYQ--ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH--~~~iiHrDlkp~Nil~~--~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ..+++..++.++.||+.||.|||  ..||+||||||+|||++  .++.+||+|||+|+...    ......++|+.|+||
T Consensus       152 ~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~----~~~~~~~~t~~y~aP  227 (382)
T 2vx3_A          152 RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG----QRIYQYIQSRFYRSP  227 (382)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT----CCCCSSCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc----cccccccCCccccCh
Confidence            34788888999999999999999  46999999999999995  47889999999998753    234567899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc----cc----
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ----TR----  226 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~----~~----  226 (395)
                      |++.+.. |+.++|||||||++|+|++|.+||.+.+..+++..|...+|.++...+....... ......    |.    
T Consensus       228 E~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  305 (382)
T 2vx3_A          228 EVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKAR-KFFEKLPDGTWNLKKT  305 (382)
T ss_dssp             HHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHH-HHEEECTTSCEEECCC
T ss_pred             HHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHH-HHHHhccccccccccc
Confidence            9999876 8999999999999999999999999999999999999999999887664321111 000000    00    


Q ss_pred             ----------cCCccchhhccC---------------CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         227 ----------KSQSLSSLYSLS---------------SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       227 ----------~~~~~~~~~~~~---------------~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                                ....+.......               ....+.+.+||.+||.+||.+||||.|+|+||||..
T Consensus       306 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~  378 (382)
T 2vx3_A          306 KDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK  378 (382)
T ss_dssp             CTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC
T ss_pred             cccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCccccc
Confidence                      000000000000               001147899999999999999999999999999975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.4e-35  Score=279.93  Aligned_cols=165  Identities=26%  Similarity=0.292  Sum_probs=142.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.... ........+||+.|+|||++
T Consensus       112 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~-~~~~~~~~~gt~~y~aPE~~  190 (345)
T 1xjd_A          112 CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML-GDAKTNTFCGTPDYIAPEIL  190 (345)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-TTCCBCCCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc-CCCcccCCCCCcccCChhhh
Confidence            35688999999999999999999999999999999999999999999999999986432 22345567899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++||||+||++|+|++|.+||.+.+....+..|...                                ...+
T Consensus       191 ~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  237 (345)
T 1xjd_A          191 LGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--------------------------------NPFY  237 (345)
T ss_dssp             TTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCCC
T ss_pred             cCCC-CCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            8876 899999999999999999999999998887777666431                                1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHH-HHHcCCccccCc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVN-SALCHPYLDEGR  276 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~-e~L~Hp~f~~~~  276 (395)
                      +...++.+.+||.+||..||.+|||+. ++++||||....
T Consensus       238 p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence            456789999999999999999999998 999999998743

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-35  Score=273.91  Aligned_cols=162  Identities=19%  Similarity=0.261  Sum_probs=141.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...    ......+||+.|+|||++
T Consensus       100 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~----~~~~~~~gt~~y~aPE~~  175 (318)
T 1fot_A          100 SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYTLCGTPDYIAPEVV  175 (318)
T ss_dssp             TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECS----SCBCCCCSCTTTCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecC----CccccccCCccccCHhHh
Confidence            3568888999999999999999999999999999999999999999999999998753    234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++|||||||++|+|++|.+||.+.+....+..|...                                ...+
T Consensus       176 ~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  222 (318)
T 1fot_A          176 STKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA--------------------------------ELRF  222 (318)
T ss_dssp             TTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC--------------------------------CCCC
T ss_pred             cCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            8876 899999999999999999999999998887777766531                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      +...++.+.+||.+||..||.+|+     +++++++||||....
T Consensus       223 p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          223 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence            566789999999999999999999     999999999998643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.8e-35  Score=282.94  Aligned_cols=171  Identities=20%  Similarity=0.240  Sum_probs=143.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+++++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.............+||+.|+|||++.
T Consensus       163 ~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~  242 (410)
T 3v8s_A          163 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK  242 (410)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhh
Confidence            45888999999999999999999999999999999999999999999999999876543323345679999999999998


Q ss_pred             cCCC---CCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         159 GARH---YSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       159 ~~~~---~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +...   |+.++|||||||++|||++|.+||.+.+....+..|......                            ..+
T Consensus       243 ~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~----------------------------~~~  294 (410)
T 3v8s_A          243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS----------------------------LTF  294 (410)
T ss_dssp             TTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH----------------------------CCC
T ss_pred             ccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc----------------------------ccC
Confidence            6542   788999999999999999999999999988888877542100                            011


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCC--CcCHHHHHcCCccccCcc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTK--RISVNSALCHPYLDEGRL  277 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~--R~ta~e~L~Hp~f~~~~~  277 (395)
                      ......+..+.+||.+||..+|.+  |+|++++++||||.+..+
T Consensus       295 p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w  338 (410)
T 3v8s_A          295 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  338 (410)
T ss_dssp             CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSC
T ss_pred             CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCH
Confidence            222467899999999999999988  999999999999987543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.3e-35  Score=271.21  Aligned_cols=195  Identities=27%  Similarity=0.411  Sum_probs=150.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||+|...... .......++|+.|+|||++.
T Consensus        97 ~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  175 (311)
T 4agu_A           97 RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP-SDYYDDEVATRWYRSPELLV  175 (311)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------------GGGCCHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc-ccccCCCcCCccccChHHHh
Confidence            45788888999999999999999999999999999999999999999999999875432 22345568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+...++...+............... ...............
T Consensus       176 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  254 (311)
T 4agu_A          176 GDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV-KIPDPEDMEPLELKF  254 (311)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC-CCCCCSSCCCHHHHC
T ss_pred             cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC-cCCCccccchhhhhc
Confidence            7556899999999999999999999999999999999999998888877654433221111111 111111222233344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      +..+..+.+||.+||..||.+|||++|+|+||||.+.
T Consensus       255 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  291 (311)
T 4agu_A          255 PNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI  291 (311)
T ss_dssp             TTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence            6788999999999999999999999999999999863

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=7.4e-35  Score=275.75  Aligned_cols=162  Identities=23%  Similarity=0.240  Sum_probs=142.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....    .....+||+.|+|||++
T Consensus       135 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~----~~~~~~gt~~y~aPE~~  210 (350)
T 1rdq_E          135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEALAPEII  210 (350)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS----CBCCCEECGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC----CcccccCCccccCHHHh
Confidence            35689999999999999999999999999999999999999999999999999987532    23456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++|||||||++|+|++|.+||.+.+....+..|...                                ...+
T Consensus       211 ~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  257 (350)
T 1rdq_E          211 LSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--------------------------------KVRF  257 (350)
T ss_dssp             TTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCCC
T ss_pred             cCCC-CCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC--------------------------------CCCC
Confidence            8876 899999999999999999999999998887777766531                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGR  276 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~  276 (395)
                      +...++.+.+||.+||..||.+||+     ++++++||||....
T Consensus       258 p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence            4567899999999999999999998     99999999998643

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=9.9e-35  Score=284.02  Aligned_cols=166  Identities=27%  Similarity=0.309  Sum_probs=141.8

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      +...+++..+..++.||+.||.|||+ .||+||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||
T Consensus       241 ~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE  319 (446)
T 4ejn_A          241 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTFCGTPEYLAPE  319 (446)
T ss_dssp             HHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------CCSSSCGGGCCHH
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC-CcccccccCCccccCHh
Confidence            34578899999999999999999998 99999999999999999999999999999864332 23455679999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++|||||||++|+|++|.+||.+.+....+..|...                                ..
T Consensus       320 ~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--------------------------------~~  366 (446)
T 4ejn_A          320 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--------------------------------EI  366 (446)
T ss_dssp             HHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CC
T ss_pred             hcCCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--------------------------------CC
Confidence            998876 899999999999999999999999998877776666431                                12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      .++...++.+.+||.+||..||.+||     |+.++|+||||.+..
T Consensus       367 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~  412 (446)
T 4ejn_A          367 RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV  412 (446)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCC
Confidence            34556789999999999999999999     999999999998743

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=6.6e-35  Score=270.06  Aligned_cols=165  Identities=21%  Similarity=0.258  Sum_probs=140.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|...... .......+||+.|+|||++.
T Consensus       111 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~  189 (297)
T 3fxz_A          111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRSTMVGTPYWMAPEVVT  189 (297)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST-TCCBCCCCSCGGGCCHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc-ccccCCccCCcCccChhhhc
Confidence            35888889999999999999999999999999999999999999999999999876543 23345568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. |+.++||||+||++|+|++|..||.+.+....+..+..... +                            ....+
T Consensus       190 ~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-~----------------------------~~~~~  239 (297)
T 3fxz_A          190 RKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-P----------------------------ELQNP  239 (297)
T ss_dssp             CSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS-C----------------------------CCSCG
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-C----------------------------CCCCc
Confidence            876 89999999999999999999999998887766665543211 0                            11223


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~  275 (297)
T 3fxz_A          240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI  275 (297)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcc
Confidence            457888999999999999999999999999999975

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.7e-35  Score=286.06  Aligned_cols=173  Identities=20%  Similarity=0.247  Sum_probs=144.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+..........+..+||+.|+|||++
T Consensus       169 ~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l  248 (437)
T 4aw2_A          169 EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL  248 (437)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHH
Confidence            35689999999999999999999999999999999999999999999999999987654433344557899999999999


Q ss_pred             hc----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 MG----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .+    ...|+.++|||||||++|||++|.+||.+.+..+.+..|....+..                           .
T Consensus       249 ~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------------~  301 (437)
T 4aw2_A          249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF---------------------------Q  301 (437)
T ss_dssp             HHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC---------------------------C
T ss_pred             hhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc---------------------------c
Confidence            72    3348999999999999999999999999999888888775321000                           0


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCC--CcCHHHHHcCCccccCcc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTK--RISVNSALCHPYLDEGRL  277 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~--R~ta~e~L~Hp~f~~~~~  277 (395)
                      +.......++.+.+||.+||..+|.+  |++++++++||||.+..+
T Consensus       302 ~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w  347 (437)
T 4aw2_A          302 FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDW  347 (437)
T ss_dssp             CCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred             CCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCH
Confidence            01122457899999999999999988  999999999999987543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.8e-35  Score=283.09  Aligned_cols=190  Identities=22%  Similarity=0.326  Sum_probs=149.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCC------------------------------------
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATY------------------------------------  121 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~------------------------------------  121 (395)
                      ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++                                    
T Consensus       141 ~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (397)
T 1wak_A          141 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNF  220 (397)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccc
Confidence            4588888999999999999999998 999999999999998765                                    


Q ss_pred             -------------CeEEeeCCcccccCCCCCCCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCC
Q psy2865         122 -------------SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQA  188 (395)
Q Consensus       122 -------------~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~  188 (395)
                                   .+||+|||+|+...    ...+..+||+.|+|||++.+.. |+.++|||||||++|+|++|.+||.+
T Consensus       221 ~~~~~~~~~~~~~~~kl~DfG~a~~~~----~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~  295 (397)
T 1wak_A          221 LVNPLEPKNAEKLKVKIADLGNACWVH----KHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEP  295 (397)
T ss_dssp             SCCTTSGGGGGGCCEEECCGGGCEETT----BCSCSCCSCGGGCCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccccceEecccccccccc----ccCccCCCCCcccCChhhcCCC-CCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence                         79999999998753    2355668999999999999876 89999999999999999999999987


Q ss_pred             CC------hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh----ccccCC------ccchhhccCCCCCHHHHHHHHHc
Q psy2865         189 QS------PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR----QTRKSQ------SLSSLYSLSSQATGEAVHLLVQM  252 (395)
Q Consensus       189 ~~------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~~~~~~~~~~~~~dll~~m  252 (395)
                      .+      ..+++..+...+|.++...+.........+...    ......      .+...+.++...+..+.+||.+|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  375 (397)
T 1wak_A          296 HSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPM  375 (397)
T ss_dssp             CCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGG
T ss_pred             CcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHH
Confidence            65      567888899999999887664332111110000    000000      01111223344567889999999


Q ss_pred             cccCCCCCcCHHHHHcCCccc
Q psy2865         253 LYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       253 L~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      |..||.+|||++|+|+||||.
T Consensus       376 L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          376 LELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             GCSSGGGSCCHHHHHTSGGGG
T ss_pred             hccChhhcCCHHHHhhCcccc
Confidence            999999999999999999996

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=9.7e-35  Score=274.47  Aligned_cols=165  Identities=22%  Similarity=0.334  Sum_probs=136.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.... ........+||+.|+|||++
T Consensus       104 ~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~-~~~~~~~~~gt~~y~aPE~~  182 (345)
T 3a8x_A          104 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIAPEIL  182 (345)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC-TTCCBCCCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC-CCCcccccCCCccccCcccc
Confidence            35689999999999999999999999999999999999999999999999999986432 22345567999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh---------HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP---------VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS  228 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~---------~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (395)
                      .+.. |+.++|||||||++|+|++|.+||.+...         ......|..                            
T Consensus       183 ~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~----------------------------  233 (345)
T 3a8x_A          183 RGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE----------------------------  233 (345)
T ss_dssp             TTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH----------------------------
T ss_pred             CCCC-CChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc----------------------------
Confidence            8876 89999999999999999999999975321         111112211                            


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCH------HHHHcCCccccCc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISV------NSALCHPYLDEGR  276 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta------~e~L~Hp~f~~~~  276 (395)
                          ....++...+..+.+||.+||..||.+|||+      .++++||||.+..
T Consensus       234 ----~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          234 ----KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             ----CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             ----CCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence                1123456788999999999999999999995      8999999998643

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=9.7e-35  Score=277.02  Aligned_cols=165  Identities=23%  Similarity=0.256  Sum_probs=143.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+++++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.... ........+||+.|+|||++
T Consensus       133 ~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~-~~~~~~~~~gt~~y~aPE~~  211 (373)
T 2r5t_A          133 ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-HNSTTSTFCGTPEYLAPEVL  211 (373)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC-CCCCCCSBSCCCCCCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc-CCCccccccCCccccCHHHh
Confidence            45688889999999999999999999999999999999999999999999999986432 22345567999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++|||||||++|||++|.+||.+.+..+.+..|...                                ...+
T Consensus       212 ~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  258 (373)
T 2r5t_A          212 HKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--------------------------------PLQL  258 (373)
T ss_dssp             TTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS--------------------------------CCCC
T ss_pred             CCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--------------------------------ccCC
Confidence            8876 899999999999999999999999998887777776531                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH----HHHHcCCccccCc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV----NSALCHPYLDEGR  276 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta----~e~L~Hp~f~~~~  276 (395)
                      +...+..+.+||.+||..||.+|+++    .+++.||||....
T Consensus       259 ~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          259 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence            56788999999999999999999986    6999999998743

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=2e-34  Score=269.88  Aligned_cols=188  Identities=33%  Similarity=0.500  Sum_probs=155.4

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++....  .......++|+.|+|||++.+
T Consensus       116 ~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~  193 (326)
T 1blx_A          116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQ  193 (326)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG--GGGGCCCCCCCTTCCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccC--CCCccccccccceeCHHHHhc
Confidence            478888899999999999999999999999999999999999999999999986532  223455688999999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|||||||++|+|++|.+||.+.+..+++..|...+|.+....|...........     ..........+..
T Consensus       194 ~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  267 (326)
T 1blx_A          194 SS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF-----HSKSAQPIEKFVT  267 (326)
T ss_dssp             CC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGS-----CCCCCCCGGGTCC
T ss_pred             CC-CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhh-----cccCcchhhhccc
Confidence            76 89999999999999999999999999999999999999999888766543221111000     0111112334557


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..+..+.+||.+||..||.+|||+.++|+||||...
T Consensus       268 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  303 (326)
T 1blx_A          268 DIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  303 (326)
T ss_dssp             SCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence            789999999999999999999999999999999763

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=2.2e-34  Score=280.56  Aligned_cols=167  Identities=25%  Similarity=0.268  Sum_probs=141.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec---CCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ---ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~---~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++   .++.+||+|||+|+..... .......+||+.|+||
T Consensus       104 ~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~-~~~~~~~~gt~~Y~AP  182 (444)
T 3soa_A          104 REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE-QQAWFGFAGTPGYLSP  182 (444)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT-CCBCCCSCSCGGGCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC-CceeecccCCcccCCH
Confidence            35688999999999999999999999999999999999998   4578999999999876432 2334567899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. |+.++||||+||++|+|++|.+||.+.+....+..|.......+                            
T Consensus       183 E~l~~~~-~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------  233 (444)
T 3soa_A          183 EVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP----------------------------  233 (444)
T ss_dssp             HHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----------------------------
T ss_pred             HHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCC----------------------------
Confidence            9998875 89999999999999999999999999888777777754321111                            


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+...++.+.+||.+||..||.+|||+.|+|+||||..
T Consensus       234 ~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            1123567899999999999999999999999999999964

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.3e-34  Score=271.77  Aligned_cols=193  Identities=22%  Similarity=0.365  Sum_probs=144.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-CeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++ .+||+|||+|+.....  ......++|+.|+|||++.
T Consensus       126 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~~~y~aPE~~~  203 (330)
T 3nsz_A          126 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLV  203 (330)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT--CCCCSCCSCGGGCCHHHHT
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC--CccccccccccccChhhhc
Confidence            477888889999999999999999999999999999999776 8999999999875432  3345568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCC-CCCChHhHHHHHHHhcCCCCHHHHHhhhhhhh---hhhhhccccCCccchh
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILF-QAQSPVQQLGLITDLLGTPTPEEMRHACDGAK---CHMLRQTRKSQSLSSL  234 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f-~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  234 (395)
                      +...++.++|||||||++|+|++|..|| .+.+..+++..+...+|.+....+........   ............+...
T Consensus       204 ~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (330)
T 3nsz_A          204 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF  283 (330)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGG
T ss_pred             CCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhh
Confidence            8556899999999999999999999888 55677788888877777543322211100000   0000000000111111


Q ss_pred             --hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 --YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 --~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        .......++.+.+||.+||.+||.+||||+|+|+||||..
T Consensus       284 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  325 (330)
T 3nsz_A          284 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  325 (330)
T ss_dssp             CCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             ccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence              1122347899999999999999999999999999999976

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.3e-34  Score=296.14  Aligned_cols=166  Identities=21%  Similarity=0.236  Sum_probs=145.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+++++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||++
T Consensus       436 ~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-~~~~~~~~GT~~Y~APE~l  514 (674)
T 3pfq_A          436 VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTKTFCGTPDYIAPEII  514 (674)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT-TCCBCCCCSCSSSCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccC-CcccccccCCCcccCHhhh
Confidence            357899999999999999999999999999999999999999999999999999864332 2345567999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. |+.++|||||||++|||++|.+||.+.+..+.+..|...                                ...+
T Consensus       515 ~~~~-~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~  561 (674)
T 3pfq_A          515 AYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--------------------------------NVAY  561 (674)
T ss_dssp             TCCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS--------------------------------CCCC
T ss_pred             cCCC-CCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            8876 899999999999999999999999999888888777531                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCH-----HHHHcCCccccCcc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISV-----NSALCHPYLDEGRL  277 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta-----~e~L~Hp~f~~~~~  277 (395)
                      +...++.+.+||.+||..||.+|+++     +++++||||....+
T Consensus       562 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w  606 (674)
T 3pfq_A          562 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  606 (674)
T ss_dssp             CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCH
T ss_pred             CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCH
Confidence            56788999999999999999999997     99999999987443

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.5e-35  Score=272.62  Aligned_cols=165  Identities=22%  Similarity=0.260  Sum_probs=142.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC--CCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA--TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~--~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.  ++.+||+|||+++....  .......+||+.|+|||+
T Consensus        97 ~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE~  174 (321)
T 1tki_A           97 FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP--GDNFRLLFTAPEYYAPEV  174 (321)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT--TCEEEEEESCGGGSCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC--CCccccccCChhhcCcHH
Confidence            35788889999999999999999999999999999999987  78999999999987643  233455689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++||||+||++|+|++|.+||.+.+....+..+......++..                            
T Consensus       175 ~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~----------------------------  225 (321)
T 1tki_A          175 HQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEE----------------------------  225 (321)
T ss_dssp             HTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHH----------------------------
T ss_pred             hcCCC-CCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChh----------------------------
Confidence            98865 8999999999999999999999999998888777776543332221                            


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .+...+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  263 (321)
T 1tki_A          226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhcc
Confidence            22467889999999999999999999999999999975

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=279.73  Aligned_cols=170  Identities=22%  Similarity=0.271  Sum_probs=139.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+++++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.............+||+.|+|||++.
T Consensus       157 ~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~  236 (412)
T 2vd5_A          157 ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ  236 (412)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHh
Confidence            46899999999999999999999999999999999999999999999999999876543332344568999999999997


Q ss_pred             c------CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         159 G------ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       159 ~------~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      +      ...|+.++|||||||++|||++|.+||.+.+..+.+..|.......                           
T Consensus       237 ~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------------  289 (412)
T 2vd5_A          237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL---------------------------  289 (412)
T ss_dssp             HHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC---------------------------
T ss_pred             hcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCc---------------------------
Confidence            3      2348999999999999999999999999998888777775311000                           


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCC---cCHHHHHcCCccccCc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKR---ISVNSALCHPYLDEGR  276 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R---~ta~e~L~Hp~f~~~~  276 (395)
                      .+.......++.+.+||.+||. +|.+|   ++++++++||||.+..
T Consensus       290 ~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~  335 (412)
T 2vd5_A          290 SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD  335 (412)
T ss_dssp             CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred             CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence            0011235688999999999999 99998   4999999999998743

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.9e-34  Score=271.77  Aligned_cols=191  Identities=21%  Similarity=0.323  Sum_probs=150.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee-------------------cCCCCeEEeeCCcccccCCCCCC
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY-------------------QATYSSKICDFGLARVEEPDPNK  140 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~-------------------~~~~~vKl~DFGla~~~~~~~~~  140 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||+                   +.++.+||+|||+++...    .
T Consensus       119 ~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~----~  194 (355)
T 2eu9_A          119 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH----E  194 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETT----S
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccc----c
Confidence            57888899999999999999999999999999999999                   567899999999998643    2


Q ss_pred             CcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhh
Q psy2865         141 AMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH  220 (395)
Q Consensus       141 ~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~  220 (395)
                      .....+||+.|+|||++.+.. |+.++|||||||++|+|++|.+||.+.+..+++..+...+|.++...+..........
T Consensus       195 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  273 (355)
T 2eu9_A          195 HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFY  273 (355)
T ss_dssp             CCCSSCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEE
T ss_pred             cccCCcCCCcccCCeeeecCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhc
Confidence            345568999999999998876 8999999999999999999999999999999999999999988887665432111100


Q ss_pred             hhh-cccc-----------CCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         221 MLR-QTRK-----------SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       221 ~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ... .+..           ...+..........+..+.+||.+||..||.+|||+.|+|+||||...
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          274 KGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             ccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence            000 0000           000011111112235678999999999999999999999999999863

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.4e-35  Score=277.37  Aligned_cols=163  Identities=20%  Similarity=0.319  Sum_probs=136.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|.....  .......+||+.|+|||++
T Consensus       102 ~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~--~~~~~~~~gt~~y~aPE~~  179 (336)
T 3h4j_B          102 KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVI  179 (336)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT--SBTTCCCTTSTTTSCGGGS
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC--CcccccccCCcCcCCHHHH
Confidence            35688999999999999999999999999999999999999999999999999987543  2334566899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|..||.+......+..+                                ....+.+
T Consensus       180 ~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i--------------------------------~~~~~~~  227 (336)
T 3h4j_B          180 NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--------------------------------NSCVYVM  227 (336)
T ss_dssp             CCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--------------------------------CSSCCCC
T ss_pred             cCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--------------------------------HcCCCCC
Confidence            88763478999999999999999999999875432211111                                1122345


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +...++.+.+||.+||..||.+|||++|+++||||..
T Consensus       228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence            5678899999999999999999999999999999975

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=2.6e-34  Score=270.23  Aligned_cols=190  Identities=22%  Similarity=0.345  Sum_probs=149.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-------------------CCCeEEeeCCcccccCCCCCC
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-------------------TYSSKICDFGLARVEEPDPNK  140 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-------------------~~~vKl~DFGla~~~~~~~~~  140 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.                   ++.+||+|||+|+...    .
T Consensus       114 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~----~  189 (339)
T 1z57_A          114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD----E  189 (339)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETT----S
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCc----c
Confidence            4677888899999999999999999999999999999987                   6789999999998743    2


Q ss_pred             CcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhh
Q psy2865         141 AMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCH  220 (395)
Q Consensus       141 ~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~  220 (395)
                      .....+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+...++.++...+..........
T Consensus       190 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  268 (339)
T 1z57_A          190 HHSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFH  268 (339)
T ss_dssp             CCCSSCSCGGGCCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEE
T ss_pred             ccccccCCccccChHHhhCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHh
Confidence            334568999999999998876 8999999999999999999999999999999999999999988877665432111000


Q ss_pred             hh-hccc-----------cCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         221 ML-RQTR-----------KSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       221 ~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .. ..|.           ....+..........++.+.+||.+||..||.+|||+.|+|+||||..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence            00 0000           000111111222334578899999999999999999999999999976

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.5e-34  Score=268.72  Aligned_cols=165  Identities=21%  Similarity=0.224  Sum_probs=141.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC----CeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY----SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~----~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++    .+||+|||+|+....  .......+||+.|+||
T Consensus       109 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aP  186 (326)
T 2y0a_A          109 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GNEFKNIFGTPEFVAP  186 (326)
T ss_dssp             SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT--TSCCCCCCSCTTTCCH
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC--CCccccccCCcCcCCc
Confidence            4588888999999999999999999999999999999999877    799999999987643  2334556899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. |+.++|||||||++|+|++|.+||.+.+..+.+..+.......+.                           
T Consensus       187 E~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------  238 (326)
T 2y0a_A          187 EIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED---------------------------  238 (326)
T ss_dssp             HHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCH---------------------------
T ss_pred             eeecCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCc---------------------------
Confidence            9998765 899999999999999999999999998887777776543322221                           


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ..+...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       239 -~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          239 -EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             -HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             -cccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence             123467888999999999999999999999999999975

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3e-34  Score=269.31  Aligned_cols=164  Identities=26%  Similarity=0.309  Sum_probs=137.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... .......+||+.|+|||++
T Consensus       115 ~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~  193 (327)
T 3a62_A          115 EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD-GTVTHTFCGTIEYMAPEIL  193 (327)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-----------CTTSSCCTTSCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccC-CccccccCCCcCccCHhhC
Confidence            456888889999999999999999999999999999999999999999999999854322 2234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|.+||.+.+....+..|...                                ...+
T Consensus       194 ~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--------------------------------~~~~  240 (327)
T 3a62_A          194 MRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC--------------------------------KLNL  240 (327)
T ss_dssp             TTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--------------------------------CCCC
T ss_pred             cCCC-CCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--------------------------------CCCC
Confidence            8876 899999999999999999999999998887777666531                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+||     ++.++|+||||...
T Consensus       241 p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          241 PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            456788999999999999999999     89999999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=2.2e-34  Score=270.63  Aligned_cols=194  Identities=25%  Similarity=0.345  Sum_probs=150.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... .......++|+.|+|||++.
T Consensus       119 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~t~~y~aPE~~~  197 (331)
T 4aaa_A          119 NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-GEVYDDEVATRWYRAPELLV  197 (331)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------------CCCCCTTCCHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC-ccccCCCcCCccccCccccc
Confidence            45788888999999999999999999999999999999999999999999999865432 23345568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+..+.+..+...+|...+................ ..............
T Consensus       198 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  276 (331)
T 4aaa_A          198 GDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR-LPEIKEREPLERRY  276 (331)
T ss_dssp             TCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC-CCCCSSCCCHHHHS
T ss_pred             CCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc-Cccccccchhhhcc
Confidence            76558999999999999999999999999999999999999888888776544332211111000 01111112223344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +..+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       277 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          277 PKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             cchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            678899999999999999999999999999999975

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=5.2e-34  Score=272.14  Aligned_cols=191  Identities=24%  Similarity=0.355  Sum_probs=145.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecC------CCCeEEeeCCcccccCCCCCCCcccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQA------TYSSKICDFGLARVEEPDPNKAMTQEVVTQYY  151 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~------~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y  151 (395)
                      ..+++..+..++.||+.||.|||+. ||+||||||+|||++.      .+.+||+|||+|+...    ...+..++|+.|
T Consensus       126 ~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~----~~~~~~~~t~~y  201 (373)
T 1q8y_A          126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD----EHYTNSIQTREY  201 (373)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETT----BCCCSCCSCGGG
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccC----CCCCCCCCCccc
Confidence            3477888889999999999999998 9999999999999953      3479999999998753    234556899999


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCC------hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh--
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR--  223 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~--  223 (395)
                      +|||++.+.. ++.++|||||||++|+|++|.+||.+.+      ..+++..+...+|.++...+.............  
T Consensus       202 ~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  280 (373)
T 1q8y_A          202 RSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL  280 (373)
T ss_dssp             CCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--C
T ss_pred             cCcHHHhCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcch
Confidence            9999999876 8999999999999999999999998764      567788888999998887665432111110000  


Q ss_pred             --cccc------CCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         224 --QTRK------SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       224 --~~~~------~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        ....      ...+.....++...+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  339 (373)
T 1q8y_A          281 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  339 (373)
T ss_dssp             BSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             hcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhc
Confidence              0000      00011122334455678999999999999999999999999999976

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.7e-34  Score=274.61  Aligned_cols=168  Identities=21%  Similarity=0.285  Sum_probs=137.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....  ....+..+||+.|+|||++
T Consensus       109 ~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~--~~~~~~~~gt~~Y~aPE~~  186 (384)
T 4fr4_A          109 NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITTMAGTKPYMAPEMF  186 (384)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT--TCCBCCCCSCGGGCCGGGT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC--CCceeccCCCccccCCeee
Confidence            35688999999999999999999999999999999999999999999999999987643  2345667999999999999


Q ss_pred             hcC--CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGA--RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~--~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+.  ..|+.++|||||||++|+|++|.+||.+.+.......+....                             ....
T Consensus       187 ~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-----------------------------~~~~  237 (384)
T 4fr4_A          187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE-----------------------------TTVV  237 (384)
T ss_dssp             CCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH-----------------------------HCCC
T ss_pred             ccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-----------------------------hccc
Confidence            742  238999999999999999999999998654332222111100                             0112


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcC-HHHHHcCCccccCc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRIS-VNSALCHPYLDEGR  276 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~t-a~e~L~Hp~f~~~~  276 (395)
                      .++...+..+.+||.+||..||.+||+ ++++++||||.+..
T Consensus       238 ~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence            345667899999999999999999998 99999999998743

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=4.3e-34  Score=271.85  Aligned_cols=165  Identities=24%  Similarity=0.263  Sum_probs=138.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC---CCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT---YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~---~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.+   +.+||+|||+|.....  .......+||+.|+|||
T Consensus       123 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~--~~~~~~~~gt~~y~aPE  200 (362)
T 2bdw_A          123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SEAWHGFAGTPGYLSPE  200 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT--CCSCCCSCSCTTTCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC--CcccccCCCCccccCHH
Confidence            457888899999999999999999999999999999999865   4599999999987643  23345678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++|||||||++|+|++|.+||.+.+....+..|.......+                            .
T Consensus       201 ~~~~~~-~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------~  251 (362)
T 2bdw_A          201 VLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP----------------------------S  251 (362)
T ss_dssp             HHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----------------------------T
T ss_pred             HHccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----------------------------c
Confidence            998865 89999999999999999999999999887777766654221111                            0


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       252 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          252 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            122456789999999999999999999999999999964

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=4.5e-34  Score=272.80  Aligned_cols=167  Identities=22%  Similarity=0.220  Sum_probs=141.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee--cCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY--QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~--~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||+  +.++.+||+|||+|+.....  ......+||+.|+|||
T Consensus       181 ~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE  258 (373)
T 2x4f_A          181 SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR--EKLKVNFGTPEFLAPE  258 (373)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT--CBCCCCCSSCTTCCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc--cccccccCCCcEeChh
Confidence            3468888889999999999999999999999999999999  56778999999999876432  3344568999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..|......++                            .
T Consensus       259 ~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~----------------------------~  309 (373)
T 2x4f_A          259 VVNYDF-VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE----------------------------D  309 (373)
T ss_dssp             HHTTCB-CCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSC----------------------------S
T ss_pred             hccCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC----------------------------h
Confidence            998765 89999999999999999999999999988888877765322111                            1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..+...++.+.+||.+||..||.+|||+.++|+||||...
T Consensus       310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence            1234678899999999999999999999999999999763

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=6.4e-34  Score=267.01  Aligned_cols=166  Identities=20%  Similarity=0.195  Sum_probs=137.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+++.....  ......+||+.|+|||
T Consensus       126 ~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE  203 (327)
T 3lm5_A          126 EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA--CELREIMGTPEYLAPE  203 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc--cccccccCCcCccCCe
Confidence            45777788899999999999999999999999999999987   789999999999876432  2344568999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+.......+.                            
T Consensus       204 ~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~----------------------------  254 (327)
T 3lm5_A          204 ILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE----------------------------  254 (327)
T ss_dssp             HHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----------------------------
T ss_pred             eecCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc----------------------------
Confidence            998776 899999999999999999999999998887777776554332221                            


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ..+...+..+.+||.+||..||.+|||++++|+||||...
T Consensus       255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~  294 (327)
T 3lm5_A          255 ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW  294 (327)
T ss_dssp             TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred             hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence            2335678899999999999999999999999999999864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.4e-33  Score=280.07  Aligned_cols=164  Identities=19%  Similarity=0.251  Sum_probs=137.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||++.
T Consensus       284 ~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~-~~~~~~~~GT~~Y~APE~l~  362 (543)
T 3c4z_A          284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-QTKTKGYAGTPGFMAPELLL  362 (543)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT-CCCBCCCCSCTTTSCHHHHT
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC-CcccccccCCccccChhhhc
Confidence            35888899999999999999999999999999999999999999999999999876432 22344569999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh----HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSP----VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~----~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +.. |+.++|||||||++|||++|.+||.+.+.    ......|..                                ..
T Consensus       363 ~~~-~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~--------------------------------~~  409 (543)
T 3c4z_A          363 GEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE--------------------------------QA  409 (543)
T ss_dssp             TCC-BCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH--------------------------------CC
T ss_pred             CCC-CChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh--------------------------------cc
Confidence            875 89999999999999999999999987643    222222221                                11


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGR  276 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~  276 (395)
                      ..++...++.+.+||.+||..||.+||+     ++++++||||....
T Consensus       410 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~  456 (543)
T 3c4z_A          410 VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS  456 (543)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred             cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence            2345678899999999999999999995     58999999998744

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.1e-33  Score=267.96  Aligned_cols=165  Identities=25%  Similarity=0.289  Sum_probs=134.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC---eEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS---SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~---vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.   +||+|||+++..... .......+||+.|+|||
T Consensus       125 ~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE  203 (351)
T 3c0i_A          125 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES-GLVAGGRVGTPHFMAPE  203 (351)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTT-SCBCCCCCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCC-CeeecCCcCCcCccCHH
Confidence            34788899999999999999999999999999999999986554   999999999876532 22345568999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++|||||||++|+|++|.+||.+.. ...+..+........+                            
T Consensus       204 ~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~----------------------------  253 (351)
T 3c0i_A          204 VVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNP----------------------------  253 (351)
T ss_dssp             HHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCH----------------------------
T ss_pred             HHcCCC-CCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCc----------------------------
Confidence            998875 8999999999999999999999998753 3334444332111111                            


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       254 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          254 RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            122457889999999999999999999999999999975

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.5e-34  Score=263.30  Aligned_cols=163  Identities=19%  Similarity=0.230  Sum_probs=134.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..... .......+||+.|+|||++.+
T Consensus       133 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~  211 (298)
T 2zv2_A          133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS-DALLSNTVGTPAFMAPESLSE  211 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSS-SCEECCCCSCGGGCCGGGCCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccc-cccccCCcCCccccChhhhcc
Confidence            5777888899999999999999999999999999999999999999999999875432 223455689999999999976


Q ss_pred             CCC--CCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         160 ARH--YSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       160 ~~~--~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      ...  ++.++|||||||++|+|++|..||.+.+.......+.....                              .+..
T Consensus       212 ~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~------------------------------~~~~  261 (298)
T 2zv2_A          212 TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL------------------------------EFPD  261 (298)
T ss_dssp             TCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC------------------------------CCCS
T ss_pred             CCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccC------------------------------CCCC
Confidence            542  37789999999999999999999988776554444432110                              0112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      ....++.+.+||.+||..||.+|||+.|+|+||||.
T Consensus       262 ~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          262 QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            346788999999999999999999999999999995

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1e-33  Score=271.29  Aligned_cols=165  Identities=23%  Similarity=0.253  Sum_probs=139.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC--CCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA--TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~--~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.  .+.+||+|||+|+.....  ......+||+.|+|||+
T Consensus       144 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~  221 (387)
T 1kob_A          144 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--EIVKVTTATAEFAAPEI  221 (387)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--SCEEEECSSGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC--cceeeeccCCCccCchh
Confidence            35788889999999999999999999999999999999974  577999999999876432  23445689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|||||||++|+|++|.+||.+.+....+..+.......                            ...
T Consensus       222 ~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~----------------------------~~~  272 (387)
T 1kob_A          222 VDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF----------------------------DED  272 (387)
T ss_dssp             HTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCC----------------------------CSS
T ss_pred             ccCCC-CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC----------------------------Ccc
Confidence            98875 8999999999999999999999999988877777665421111                            012


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (387)
T 1kob_A          273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  310 (387)
T ss_dssp             TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence            23567889999999999999999999999999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-33  Score=277.63  Aligned_cols=162  Identities=22%  Similarity=0.319  Sum_probs=140.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|.....  .......+||+.|+|||++.
T Consensus       111 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~~  188 (476)
T 2y94_A          111 GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRTSCGSPNYAAPEVIS  188 (476)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT--TCCBCCCCSCSTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccc--cccccccCCCcCeEChhhcc
Confidence            4588888999999999999999999999999999999999999999999999987643  23345668999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+....+..|...                                .+..+
T Consensus       189 ~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--------------------------------~~~~p  236 (476)
T 2y94_A          189 GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--------------------------------IFYTP  236 (476)
T ss_dssp             TCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT--------------------------------CCCCC
T ss_pred             CCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--------------------------------CcCCC
Confidence            8764578999999999999999999999988776666665431                                12334


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+|||+.++++||||..
T Consensus       237 ~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          237 QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence            567889999999999999999999999999999975

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=7.2e-34  Score=273.86  Aligned_cols=165  Identities=22%  Similarity=0.303  Sum_probs=128.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+|+....  ....+..+||+.|+|||
T Consensus       156 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE  233 (400)
T 1nxk_A          156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPYYVAPE  233 (400)
T ss_dssp             -CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------CTTCCGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCC--CCccccCCCCCCccCHh
Confidence            45899999999999999999999999999999999999997   78899999999987542  23345678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh----HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ----QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~----~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      ++.+.. |+.++||||||||+|+|++|.+||.+.+...    ....+....  .                          
T Consensus       234 ~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~--~--------------------------  284 (400)
T 1nxk_A          234 VLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--Y--------------------------  284 (400)
T ss_dssp             GSCCCC-SSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTC--C--------------------------
T ss_pred             hcCCCC-CCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCc--c--------------------------
Confidence            997765 8999999999999999999999998765432    222221100  0                          


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......+...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       285 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  327 (400)
T 1nxk_A          285 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  327 (400)
T ss_dssp             CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence            0001123467889999999999999999999999999999965

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.2e-33  Score=261.81  Aligned_cols=194  Identities=25%  Similarity=0.441  Sum_probs=151.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCCC--CCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDP--NKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~--~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||+++......  ........+|+.|+|||
T Consensus       115 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (320)
T 2i6l_A          115 GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR  194 (320)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcH
Confidence            4577888889999999999999999999999999999997 56789999999998754321  12334557899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+...++.++|||||||++|+|++|..||.+.+..+.+..+....+.+..+.+...............  ......+.
T Consensus       195 ~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  272 (320)
T 2i6l_A          195 LLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDM--TEPHKPLT  272 (320)
T ss_dssp             HHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHT--TSCCCCHH
T ss_pred             HhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccc--cCCCCChh
Confidence            9987555899999999999999999999999999999999998888777776655443221111111100  01111233


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (320)
T 2i6l_A          273 QLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI  311 (320)
T ss_dssp             HHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred             HhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence            455678999999999999999999999999999999975

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.98  E-value=5.3e-34  Score=265.68  Aligned_cols=160  Identities=22%  Similarity=0.201  Sum_probs=129.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|......  ......+||+.|+|||++
T Consensus       151 ~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~  228 (311)
T 3p1a_A          151 GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--GAGEVQEGDPRYMAPELL  228 (311)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--------CCCCCGGGCCGGGG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--CCCcccCCCccccCHhHh
Confidence            346888999999999999999999999999999999999999999999999999875432  234455799999999998


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+ . ++.++|||||||++|+|++|..+|.+.....   .+..  +..+                            ..+
T Consensus       229 ~~-~-~~~~~DiwslG~il~el~~g~~~~~~~~~~~---~~~~--~~~~----------------------------~~~  273 (311)
T 3p1a_A          229 QG-S-YGTAADVFSLGLTILEVACNMELPHGGEGWQ---QLRQ--GYLP----------------------------PEF  273 (311)
T ss_dssp             GT-C-CSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---HHTT--TCCC----------------------------HHH
T ss_pred             cC-C-CCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHhc--cCCC----------------------------ccc
Confidence            76 3 8999999999999999999987776543221   1111  1111                            123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       274 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          274 TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            3567889999999999999999999999999999964

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.98  E-value=6.6e-34  Score=270.51  Aligned_cols=168  Identities=20%  Similarity=0.266  Sum_probs=122.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC--eEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS--SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~--vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.  +||+|||+|+....  .......+||+.|+|||
T Consensus       110 ~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE  187 (361)
T 3uc3_A          110 AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--HSQPKSTVGTPAYIAPE  187 (361)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------------CTTSCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc--cCCCCCCcCCCCcCChh
Confidence            356899999999999999999999999999999999999987765  99999999985332  22345568999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHH-hcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITD-LLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+...++.++||||+||++|+|++|.+||.+......+..+.. ++...                           ..
T Consensus       188 ~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---------------------------~~  240 (361)
T 3uc3_A          188 VLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK---------------------------YS  240 (361)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTC---------------------------CC
T ss_pred             hhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCC---------------------------CC
Confidence            998876334458999999999999999999987655433333221 11100                           00


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .......++.+.+||.+||..||.+|||+.|+|+||||..
T Consensus       241 ~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          241 IPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred             CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence            1112356889999999999999999999999999999964

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.98  E-value=4.2e-33  Score=265.38  Aligned_cols=166  Identities=20%  Similarity=0.317  Sum_probs=139.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++.....  .......+||+.|+|||++
T Consensus       194 ~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~--~~~~~~~~gt~~y~aPE~~  271 (365)
T 2y7j_A          194 KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP--GEKLRELCGTPGYLAPEIL  271 (365)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT--TCCBCCCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC--CcccccCCCCCCccChhhc
Confidence            35688889999999999999999999999999999999999999999999999987653  2334567899999999998


Q ss_pred             hcC-----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         158 MGA-----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       158 ~~~-----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      .+.     ..|+.++|||||||++|+|++|..||.+.+....+..+......++.                         
T Consensus       272 ~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~-------------------------  326 (365)
T 2y7j_A          272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS-------------------------  326 (365)
T ss_dssp             HHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH-------------------------
T ss_pred             cccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC-------------------------
Confidence            743     23788999999999999999999999988877776666543222111                         


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                         ..+...+..+.+||.+||..||.+|||+.++|+||||.
T Consensus       327 ---~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          327 ---PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             ---HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             ---cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence               11245678899999999999999999999999999995

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.98  E-value=1.3e-33  Score=258.79  Aligned_cols=160  Identities=21%  Similarity=0.313  Sum_probs=135.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++.....   ......++|+.|+|||++.
T Consensus       104 ~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~---~~~~~~~~~~~y~aPE~~~  180 (279)
T 3fdn_A          104 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTDLCGTLDYLPPEMIE  180 (279)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----------CCCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc---ccccccCCCCCccCHhHhc
Confidence            5688888999999999999999999999999999999999999999999999875432   2344568899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|..||.+.+....+..+....                                ..++
T Consensus       181 ~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------------------------------~~~~  227 (279)
T 3fdn_A          181 GRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--------------------------------FTFP  227 (279)
T ss_dssp             TCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC--------------------------------CCCC
T ss_pred             cCC-CCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC--------------------------------CCCC
Confidence            865 8999999999999999999999999888777666664321                                2334


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       228 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~  263 (279)
T 3fdn_A          228 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  263 (279)
T ss_dssp             TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred             CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence            567889999999999999999999999999999976

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.98  E-value=1.8e-33  Score=263.50  Aligned_cols=167  Identities=19%  Similarity=0.199  Sum_probs=134.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++...... .......+||+.|+|||++
T Consensus       100 ~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  179 (323)
T 3tki_A          100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  179 (323)
T ss_dssp             TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHh
Confidence            357888889999999999999999999999999999999999999999999998643211 2234567899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++|||||||++|+|++|..||.+.+.............                             .....
T Consensus       180 ~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~  230 (323)
T 3tki_A          180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-----------------------------TYLNP  230 (323)
T ss_dssp             HCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC-----------------------------TTSTT
T ss_pred             ccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc-----------------------------ccCCc
Confidence            8876457899999999999999999999987665433222211000                             00111


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          231 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence            2456788999999999999999999999999999975

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.98  E-value=8.3e-34  Score=282.61  Aligned_cols=166  Identities=23%  Similarity=0.314  Sum_probs=136.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....  .......+||+.|+|||++.+
T Consensus       282 ~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~--~~~~~~~~GT~~Y~APEvl~~  359 (576)
T 2acx_A          282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRVGTVGYMAPEVVKN  359 (576)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT--TCCEECCCSCGGGCCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc--CccccccCCCccccCHHHHcC
Confidence            488889999999999999999999999999999999999999999999999987643  223455699999999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. |+.++|||||||++|+|++|.+||.+.+.......+...+.                            .....++.
T Consensus       360 ~~-~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~----------------------------~~~~~~p~  410 (576)
T 2acx_A          360 ER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK----------------------------EVPEEYSE  410 (576)
T ss_dssp             CE-ESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH----------------------------HCCCCCCT
T ss_pred             CC-CCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh----------------------------cccccCCc
Confidence            76 89999999999999999999999987653221111111000                            00113446


Q ss_pred             CCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      ..++.+.+||.+||..||.+||     |++++++||||....
T Consensus       411 ~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~  452 (576)
T 2acx_A          411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN  452 (576)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred             cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence            6889999999999999999999     899999999998743

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.98  E-value=3e-33  Score=261.74  Aligned_cols=164  Identities=22%  Similarity=0.319  Sum_probs=138.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+
T Consensus       137 ~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~  215 (321)
T 2c30_A          137 RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISR  215 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcC
Confidence            57888889999999999999999999999999999999999999999999998764322 23455689999999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .. ++.++|||||||++|+|++|..||.+.+....+..+......                             ......
T Consensus       216 ~~-~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  265 (321)
T 2c30_A          216 SL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-----------------------------KLKNSH  265 (321)
T ss_dssp             CC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC-----------------------------CCTTGG
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----------------------------CcCccc
Confidence            65 899999999999999999999999988877666555432100                             011223


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  300 (321)
T 2c30_A          266 KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ  300 (321)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence            46788999999999999999999999999999975

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.98  E-value=5.4e-33  Score=259.97  Aligned_cols=165  Identities=21%  Similarity=0.234  Sum_probs=141.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC----CeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY----SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~----~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||+++.++    .+||+|||++......  ......+||+.|+||
T Consensus       110 ~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~gt~~y~aP  187 (321)
T 2a2a_A          110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAP  187 (321)
T ss_dssp             SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTT--CCCCCCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcc--ccccccCCCCCccCc
Confidence            4578888999999999999999999999999999999999887    7999999999876432  234556899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+.......+.                           
T Consensus       188 E~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------  239 (321)
T 2a2a_A          188 EIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE---------------------------  239 (321)
T ss_dssp             HHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCH---------------------------
T ss_pred             ccccCCC-CCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccCh---------------------------
Confidence            9998765 899999999999999999999999998887777776543322222                           


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ..+...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       240 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          240 -EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             -HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             -hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence             123467788999999999999999999999999999975

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.98  E-value=1.5e-33  Score=269.16  Aligned_cols=161  Identities=14%  Similarity=0.114  Sum_probs=125.2

Q ss_pred             chhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc--CCCCC
Q psy2865          87 PFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG--ARHYS  164 (395)
Q Consensus        87 ~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~--~~~~~  164 (395)
                      ..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...    .......+|+.|+|||++.+  .. |+
T Consensus       197 ~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~----~~~~~~~~t~~y~aPE~~~~~~~~-~~  271 (371)
T 3q60_A          197 HILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG----TRGPASSVPVTYAPREFLNASTAT-FT  271 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETT----CEEEGGGSCGGGCCHHHHTCSEEE-CC
T ss_pred             HHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecC----CCccCccCCcCCcChhhccCCCCC-cC
Confidence            4666999999999999999999999999999999999999999998753    22224577899999999976  44 89


Q ss_pred             ccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHH
Q psy2865         165 AAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGE  244 (395)
Q Consensus       165 ~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (395)
                      .++|||||||++|+|++|.+||.+......-     .....                  ...........+......++.
T Consensus       272 ~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-----~~~~~------------------~~~~~~~~~~~~~~~~~~~~~  328 (371)
T 3q60_A          272 HALNAWQLGLSIYRVWCLFLPFGLVTPGIKG-----SWKRP------------------SLRVPGTDSLAFGSCTPLPDF  328 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT-----CCCBC------------------CTTSCCCCSCCCTTSSCCCHH
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCcCccccc-----chhhh------------------hhhhccccccchhhccCCCHH
Confidence            9999999999999999999999876432100     00000                  000000001112233578999


Q ss_pred             HHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         245 AVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       245 ~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      +.+||.+||..||++|||+.++|+||||...
T Consensus       329 ~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          329 VKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             HHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence            9999999999999999999999999999763

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.98  E-value=1.3e-33  Score=266.47  Aligned_cols=166  Identities=27%  Similarity=0.368  Sum_probs=134.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC----CCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT----YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~----~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||+...    +.+||+|||+|...... .......+||+.|+||
T Consensus       111 ~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~gt~~y~aP  189 (342)
T 2qr7_A          111 KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-NGLLMTPCYTANFVAP  189 (342)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT-TCCBCCSSCCSSCCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC-CCceeccCCCccccCH
Confidence            468899999999999999999999999999999999998533    35999999999865432 2334556899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC---ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ---SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~---~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      |++.+.. |+.++|||||||++|+|++|.+||.+.   +..+.+..|....  .                          
T Consensus       190 E~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~--~--------------------------  240 (342)
T 2qr7_A          190 EVLERQG-YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--F--------------------------  240 (342)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC--C--------------------------
T ss_pred             HHhcCCC-CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC--c--------------------------
Confidence            9998865 899999999999999999999999864   2333344433210  0                          


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......+...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            0011234567899999999999999999999999999999964

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.98  E-value=7.2e-34  Score=266.45  Aligned_cols=167  Identities=24%  Similarity=0.384  Sum_probs=114.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC---CeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY---SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~---~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++   .+||+|||+|+..... .......++|+.|+||
T Consensus       100 ~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~t~~y~aP  178 (325)
T 3kn6_A          100 KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPCFTLHYAAP  178 (325)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------------
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC-CCcccccCCCcCccCH
Confidence            35688999999999999999999999999999999999998665   7999999999865432 2344566889999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh-------HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcccc
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP-------VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK  227 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-------~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  227 (395)
                      |++.+.. |+.++||||+||++|+|++|.+||.+.+.       .+.+..+.......+                     
T Consensus       179 E~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~---------------------  236 (325)
T 3kn6_A          179 ELLNQNG-YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE---------------------  236 (325)
T ss_dssp             -----CC-CCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC---------------------
T ss_pred             HHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC---------------------
Confidence            9998876 89999999999999999999999987543       222222221110000                     


Q ss_pred             CCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         228 SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                             ...+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       237 -------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          237 -------GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             -------SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred             -------cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence                   1112457889999999999999999999999999999975

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.98  E-value=4e-34  Score=273.72  Aligned_cols=154  Identities=9%  Similarity=0.087  Sum_probs=126.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...    ...+..+| +.|+|||++.+
T Consensus       202 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~----~~~~~~~g-~~y~aPE~~~~  276 (377)
T 3byv_A          202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----ARVVSSVS-RGFEPPELEAR  276 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETT----CEEECCCC-TTCCCHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecC----CcccCCCC-cCccChhhhcc
Confidence            34447777899999999999999999999999999999999999999999998632    23455677 99999999988


Q ss_pred             C----------CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         160 A----------RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       160 ~----------~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      .          ..|+.++|||||||++|+|++|..||.+.+....+..                                
T Consensus       277 ~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~--------------------------------  324 (377)
T 3byv_A          277 RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW--------------------------------  324 (377)
T ss_dssp             HTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGG--------------------------------
T ss_pred             cccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhh--------------------------------
Confidence            6          1389999999999999999999999976553322111                                


Q ss_pred             ccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                          ........++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       325 ----~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          325 ----IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             ----GGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             ----hhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence                12223567889999999999999999999999999999975

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.98  E-value=3.7e-33  Score=264.19  Aligned_cols=165  Identities=27%  Similarity=0.326  Sum_probs=126.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+++....  .......+||+.|+|||
T Consensus       143 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE  220 (349)
T 2w4o_A          143 GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKTVCGTPGYCAPE  220 (349)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------------CGGGSCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc--ccccccccCCCCccCHH
Confidence            45788888999999999999999999999999999999975   88999999999986542  22345568999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh-HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ-QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. |+.++|||||||++|+|++|..||.+..... .+..+......                            ..
T Consensus       221 ~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~----------------------------~~  271 (349)
T 2w4o_A          221 ILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY----------------------------FI  271 (349)
T ss_dssp             HHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC----------------------------CC
T ss_pred             HhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc----------------------------cC
Confidence            998876 8999999999999999999999998765543 33333321100                            01


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  311 (349)
T 2w4o_A          272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG  311 (349)
T ss_dssp             TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence            1234567889999999999999999999999999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.98  E-value=3.7e-33  Score=268.07  Aligned_cols=197  Identities=17%  Similarity=0.132  Sum_probs=133.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC------CCCccccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP------NKAMTQEVVTQYYR  152 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~------~~~~~~~~~t~~y~  152 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......      .......+||+.|+
T Consensus       123 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  202 (389)
T 3gni_B          123 DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL  202 (389)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccccccccccccccccccccc
Confidence            458888899999999999999999999999999999999999999999999986532211      11223348899999


Q ss_pred             chhhhhcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhc--------CCCCHHHHHhhhhhhhhhhh-
Q psy2865         153 APEILMGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLL--------GTPTPEEMRHACDGAKCHML-  222 (395)
Q Consensus       153 aPEvl~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~--------g~~~~~~~~~~~~~~~~~~~-  222 (395)
                      |||++.+. ..|+.++|||||||++|+|++|.+||.+.+....+..+....        +.+................. 
T Consensus       203 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (389)
T 3gni_B          203 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLS  282 (389)
T ss_dssp             CHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------------------------------
T ss_pred             CHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccc
Confidence            99999873 348999999999999999999999999877666554433210        00000000000000000000 


Q ss_pred             -----hccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         223 -----RQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       223 -----~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                           ...............+...++.+.+||.+||.+||.+|||+.|+|+||||...
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~  340 (389)
T 3gni_B          283 DSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  340 (389)
T ss_dssp             -----------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred             cccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence                 00000000111223456788999999999999999999999999999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.98  E-value=7.4e-34  Score=263.22  Aligned_cols=181  Identities=17%  Similarity=0.165  Sum_probs=119.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc--------CccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID--------GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~--------~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~  147 (395)
                      ..+++..+..++.|++.||+|||+.        +||||||||+|||++.++.+||+|||+|+.......   ......+|
T Consensus        95 ~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~G  174 (303)
T 3hmm_A           95 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG  174 (303)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----C
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccc
Confidence            4578888889999999999999987        999999999999999999999999999987543221   12334689


Q ss_pred             cccccchhhhhcCC-----CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         148 TQYYRAPEILMGAR-----HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       148 t~~y~aPEvl~~~~-----~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                      |+.|||||++.+..     .|+.++|||||||++|||+||.+||........... ....+.+..+.+...       +.
T Consensus       175 T~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~-------~~  246 (303)
T 3hmm_A          175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY-DLVPSDPSVEEMRKV-------VC  246 (303)
T ss_dssp             CGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT-TTSCSSCCHHHHHHH-------HT
T ss_pred             cccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccch-hcccccchHHHHHHH-------Hh
Confidence            99999999997642     267799999999999999999888754332110000 000000111111000       00


Q ss_pred             hccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         223 RQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .....+ .+.. ..........+.+|+.+||..||++|||+.|+++.
T Consensus       247 ~~~~rp-~~p~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          247 EQKLRP-NIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             TSCCCC-CCCG-GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             cccCCC-CCCc-cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            000000 0000 00011223467899999999999999999999863

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.98  E-value=5.8e-33  Score=254.87  Aligned_cols=166  Identities=24%  Similarity=0.260  Sum_probs=139.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC---eEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS---SKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~---vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.   +||+|||++.....  ........||+.|+||
T Consensus        99 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~y~aP  176 (284)
T 3kk8_A           99 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SEAWHGFAGTPGYLSP  176 (284)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS--SCBCCCSCSCGGGCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc--CccccCCCCCcCCcCc
Confidence            356888889999999999999999999999999999999986655   99999999987543  2334556899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. ++.++||||+||++|+|++|..||.+.+.......+.......+                            
T Consensus       177 E~~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------  227 (284)
T 3kk8_A          177 EVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP----------------------------  227 (284)
T ss_dssp             HHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----------------------------
T ss_pred             hhhcCCC-CCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCC----------------------------
Confidence            9998876 89999999999999999999999999887776666644221111                            


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .......++.+.+||.+||..||.+|||+.|+|+||||..
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  267 (284)
T 3kk8_A          228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  267 (284)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHS
T ss_pred             chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccC
Confidence            1123467889999999999999999999999999999976

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=1.9e-33  Score=266.88  Aligned_cols=169  Identities=21%  Similarity=0.263  Sum_probs=135.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.............+||+.|+|||++.
T Consensus       154 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  233 (355)
T 1vzo_A          154 ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR  233 (355)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhc
Confidence            46888899999999999999999999999999999999999999999999999865433333445568999999999998


Q ss_pred             cC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +. ..++.++|||||||++|+|++|..||...........+....                            ......+
T Consensus       234 ~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~----------------------------~~~~~~~  285 (355)
T 1vzo_A          234 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI----------------------------LKSEPPY  285 (355)
T ss_dssp             TCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH----------------------------HHCCCCC
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHH----------------------------hccCCCC
Confidence            63 237889999999999999999999998654332222222100                            0011234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      +...+..+.+||.+||..||.+||     |+.++++||||...
T Consensus       286 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          286 PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            456788999999999999999999     99999999999863

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.98  E-value=4.1e-33  Score=275.47  Aligned_cols=165  Identities=25%  Similarity=0.360  Sum_probs=137.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec---CCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ---ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~---~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++   .++.+||+|||+|+....  .......+||+.|+||
T Consensus       115 ~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aP  192 (486)
T 3mwu_A          115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRIGTAYYIAP  192 (486)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC--C----CCTTGGGGCCG
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC--CCccCCCcCCCCCCCH
Confidence            35689999999999999999999999999999999999995   456799999999986543  2345567899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+  .|+.++||||+|||+|+|++|.+||.+.+..+.+..+.......+                            
T Consensus       193 E~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------------------------  242 (486)
T 3mwu_A          193 EVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD----------------------------  242 (486)
T ss_dssp             GGGGS--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC----------------------------
T ss_pred             HHhCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----------------------------
Confidence            99876  389999999999999999999999999988887777754221111                            


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~  282 (486)
T 3mwu_A          243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK  282 (486)
T ss_dssp             SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHH
T ss_pred             CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhcc
Confidence            1123457889999999999999999999999999999975

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.98  E-value=2.2e-33  Score=265.05  Aligned_cols=166  Identities=23%  Similarity=0.307  Sum_probs=127.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++ ++.+||+|||+|+........ .....+||+.|+|||+
T Consensus       102 ~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~  180 (343)
T 3dbq_A          102 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA  180 (343)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHH
Confidence            34678888899999999999999999999999999999997 678999999999876432221 2345689999999999


Q ss_pred             hhc----------CCCCCccchHHhHHHHHHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcc
Q psy2865         157 LMG----------ARHYSAAVDVWSVGCIFAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQT  225 (395)
Q Consensus       157 l~~----------~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  225 (395)
                      +.+          ...|+.++|||||||++|+|++|..||.+... ...+..+..   ..                    
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---~~--------------------  237 (343)
T 3dbq_A          181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID---PN--------------------  237 (343)
T ss_dssp             HHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC---TT--------------------
T ss_pred             HhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc---CC--------------------
Confidence            975          13488999999999999999999999986533 222222211   00                    


Q ss_pred             ccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         226 RKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                             ....++...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       238 -------~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          238 -------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             -------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             -------cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence                   112344556788999999999999999999999999999974

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=3.5e-33  Score=268.22  Aligned_cols=165  Identities=22%  Similarity=0.294  Sum_probs=128.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++ ++.+||+|||+|+....... ......+||+.|+|||++
T Consensus       150 ~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  228 (390)
T 2zmd_A          150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI  228 (390)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHh
Confidence            3567777889999999999999999999999999999995 58899999999987643221 123456899999999999


Q ss_pred             hcC----------CCCCccchHHhHHHHHHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc
Q psy2865         158 MGA----------RHYSAAVDVWSVGCIFAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR  226 (395)
Q Consensus       158 ~~~----------~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  226 (395)
                      .+.          ..|+.++||||||||+|+|++|.+||.+... ...+..+...   .                     
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~---~---------------------  284 (390)
T 2zmd_A          229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP---N---------------------  284 (390)
T ss_dssp             HCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCT---T---------------------
T ss_pred             hhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCc---c---------------------
Confidence            752          2488999999999999999999999987543 2333332210   0                     


Q ss_pred             cCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         227 KSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                            ....++...+..+.+||.+||..||.+|||+.|+|+||||..
T Consensus       285 ------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  326 (390)
T 2zmd_A          285 ------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  326 (390)
T ss_dssp             ------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             ------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence                  011234455788999999999999999999999999999975

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=9.9e-33  Score=252.48  Aligned_cols=165  Identities=22%  Similarity=0.288  Sum_probs=140.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee---cCCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY---QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~---~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++.....  .......++|+.|+||
T Consensus       100 ~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~--~~~~~~~~~t~~y~aP  177 (277)
T 3f3z_A          100 KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP--GKMMRTKVGTPYYVSP  177 (277)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT--TSCBCCCCSCTTTCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC--ccchhccCCCCCccCh
Confidence            3558888899999999999999999999999999999999   7889999999999987543  2334556899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.  ++.++||||+||++|+|++|..||.+.+..+.+..+.......+..                          
T Consensus       178 E~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------  229 (277)
T 3f3z_A          178 QVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEK--------------------------  229 (277)
T ss_dssp             HHHTTC--BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHH--------------------------
T ss_pred             HHhccc--CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCch--------------------------
Confidence            998763  7999999999999999999999999988877777765543332221                          


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        .....++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       230 --~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~  267 (277)
T 3f3z_A          230 --DWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK  267 (277)
T ss_dssp             --HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred             --hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence              11356789999999999999999999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=6.1e-33  Score=274.75  Aligned_cols=165  Identities=28%  Similarity=0.360  Sum_probs=139.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+|+....  .......+||+.|+||
T Consensus       130 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~--~~~~~~~~gt~~y~aP  207 (494)
T 3lij_A          130 RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN--QKKMKERLGTAYYIAP  207 (494)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT--TBCBCCCCSCTTTCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC--CccccccCCCcCeeCH
Confidence            356888889999999999999999999999999999999976   45599999999987643  2345567899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+  .|+.++||||+||++|+|++|.+||.+.+..+.+..+.......+.                           
T Consensus       208 E~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------  258 (494)
T 3lij_A          208 EVLRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS---------------------------  258 (494)
T ss_dssp             HHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS---------------------------
T ss_pred             HHHcc--cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---------------------------
Confidence            99864  3899999999999999999999999999888877777553222111                           


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ..+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       259 -~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          259 -PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             -GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             -hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence             123567889999999999999999999999999999975

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=1.1e-32  Score=253.52  Aligned_cols=166  Identities=23%  Similarity=0.258  Sum_probs=130.7

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee---cCCCCeEEeeCCcccccCCCCCCCccccccccccc
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY---QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYR  152 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~---~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~  152 (395)
                      .+...+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|.....  .......++|+.|+
T Consensus       116 ~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~t~~y~  193 (285)
T 3is5_A          116 ARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS--DEHSTNAAGTALYM  193 (285)
T ss_dssp             HHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------CTTGGGC
T ss_pred             hcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC--cccCcCcccccCcC
Confidence            344678889999999999999999999999999999999999   4567899999999986543  22345568999999


Q ss_pred             chhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         153 APEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       153 aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      |||++.+  .++.++|||||||++|+|++|..||.+.+.......+......                            
T Consensus       194 aPE~~~~--~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~----------------------------  243 (285)
T 3is5_A          194 APEVFKR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN----------------------------  243 (285)
T ss_dssp             CHHHHTT--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------------
T ss_pred             ChHHhcc--CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcc----------------------------
Confidence            9999864  3899999999999999999999999988766554444321100                            


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ........++.+.+||.+||..||.+|||+.|+|+||||..
T Consensus       244 -~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          244 -YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             -CCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             -cccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence             00112346789999999999999999999999999999964

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=1e-32  Score=257.31  Aligned_cols=168  Identities=18%  Similarity=0.250  Sum_probs=125.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC---eEEeeCCcccccCCCC------CCCcccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS---SKICDFGLARVEEPDP------NKAMTQEVVTQ  149 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~---vKl~DFGla~~~~~~~------~~~~~~~~~t~  149 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.   +||+|||++.......      .......+||+
T Consensus       106 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~  185 (316)
T 2ac3_A          106 RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA  185 (316)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCc
Confidence            56888889999999999999999999999999999999997765   9999999997643211      11233457999


Q ss_pred             cccchhhhhcC----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHh---------------HHHHHHHhcCCCCHHHH
Q psy2865         150 YYRAPEILMGA----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ---------------QLGLITDLLGTPTPEEM  210 (395)
Q Consensus       150 ~y~aPEvl~~~----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~---------------~l~~i~~~~g~~~~~~~  210 (395)
                      .|+|||++.+.    ..|+.++|||||||++|+|++|.+||.+.+..+               .+..+....-..+    
T Consensus       186 ~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----  261 (316)
T 2ac3_A          186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP----  261 (316)
T ss_dssp             GGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCC----
T ss_pred             CccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccC----
Confidence            99999999751    237899999999999999999999998765321               1111111000000    


Q ss_pred             HhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         211 RHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                                              .......++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       262 ------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  301 (316)
T 2ac3_A          262 ------------------------DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG  301 (316)
T ss_dssp             ------------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-
T ss_pred             ------------------------chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcC
Confidence                                    0112457889999999999999999999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=2.8e-33  Score=276.62  Aligned_cols=164  Identities=26%  Similarity=0.330  Sum_probs=139.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee---cCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY---QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~---~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+....  .......+||+.|+|||
T Consensus       121 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE  198 (484)
T 3nyv_A          121 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIAPE  198 (484)
T ss_dssp             SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC--CCSHHHHTTGGGTCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc--ccccccCCCCccccCce
Confidence            458888899999999999999999999999999999999   4678999999999987643  23455668999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+  .|+.++||||+||++|+|++|.+||.+.+..+.+..|.......+                            .
T Consensus       199 ~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------------------------~  248 (484)
T 3nyv_A          199 VLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE----------------------------L  248 (484)
T ss_dssp             HHHT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----------------------------S
T ss_pred             eecC--CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------C
Confidence            9977  389999999999999999999999999988888777754321111                            1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       249 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~  287 (484)
T 3nyv_A          249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT  287 (484)
T ss_dssp             GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHH
T ss_pred             cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcc
Confidence            123457889999999999999999999999999999975

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=4.3e-33  Score=262.21  Aligned_cols=156  Identities=17%  Similarity=0.261  Sum_probs=132.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||..||+||||||+|||++.++.+||+|||+++.....  ......+||+.|+|||++.
T Consensus       125 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~  202 (335)
T 3dls_A          125 PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--KLFYTFCGTIEYCAPEVLM  202 (335)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT--CCBCEECSCGGGCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC--CceeccCCCccccChhhhc
Confidence            45888889999999999999999999999999999999999999999999999876432  3345568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|||||||++|+|++|..||.+....                                      .......+
T Consensus       203 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------------------------------~~~~~~~~  244 (335)
T 3dls_A          203 GNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------------------------------VEAAIHPP  244 (335)
T ss_dssp             TCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------------------------------------TTTCCCCS
T ss_pred             CCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------------------------------------HhhccCCC
Confidence            8764588999999999999999999999652210                                      00112234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       245 ~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          245 YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence            457889999999999999999999999999999975

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=1.5e-32  Score=272.67  Aligned_cols=165  Identities=22%  Similarity=0.246  Sum_probs=141.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC---CeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY---SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~---~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++   .+||+|||+|+....  .......+||+.|+||
T Consensus       140 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aP  217 (504)
T 3q5i_A          140 RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK--DYKLRDRLGTAYYIAP  217 (504)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCT--TSCBCCCCSCTTTCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCC--CCccccccCCcCCCCH
Confidence            35689999999999999999999999999999999999998765   699999999987643  2345567899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+  .|+.++||||+||++|+|++|.+||.+.+..+.+..|.......+.                           
T Consensus       218 E~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------  268 (504)
T 3q5i_A          218 EVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF---------------------------  268 (504)
T ss_dssp             HHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH---------------------------
T ss_pred             HHhcc--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---------------------------
Confidence            99874  3899999999999999999999999999888887777653222221                           


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ..+...++.+.+||.+||.+||.+|||+.|+|+||||..
T Consensus       269 -~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          269 -NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             -HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             -cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence             122567889999999999999999999999999999975

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=8.2e-33  Score=261.63  Aligned_cols=162  Identities=20%  Similarity=0.204  Sum_probs=136.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....     ....+||+.|+|||++
T Consensus       148 ~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-----~~~~~gt~~y~aPE~~  222 (348)
T 1u5q_A          148 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANSFVGTPYWMAPEVI  222 (348)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----BCCCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----CCcccCCcceeCHhhh
Confidence            35688888999999999999999999999999999999999999999999999986532     3456899999999999


Q ss_pred             hc--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MG--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+  ...|+.++|||||||++|+|++|.+||.+.+....+..+..... +                             .
T Consensus       223 ~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~-~-----------------------------~  272 (348)
T 1u5q_A          223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-P-----------------------------A  272 (348)
T ss_dssp             HTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-C-----------------------------C
T ss_pred             ccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-C-----------------------------C
Confidence            63  23489999999999999999999999998887766655543110 0                             0


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......+..+.+||.+||..||.+|||++++|+||||..
T Consensus       273 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          273 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence            112456788999999999999999999999999999964

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=4.7e-33  Score=256.17  Aligned_cols=166  Identities=21%  Similarity=0.258  Sum_probs=125.1

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      +...+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+||+|||+|+.....  .......||+.|+|||
T Consensus       102 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE  179 (290)
T 3fme_A          102 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD--VAKDIDAGCKPYMAPE  179 (290)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------------CCCCCCSCHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc--ccccccCCCccccChh
Confidence            345788999999999999999999998 9999999999999999999999999999875432  2233457899999999


Q ss_pred             hh---hcCCCCCccchHHhHHHHHHHHHcCCCCCCCC-ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         156 IL---MGARHYSAAVDVWSVGCIFAELLGRRILFQAQ-SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       156 vl---~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~-~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      ++   .....++.++||||+||++|+|++|..||.+. .....+..+.....                            
T Consensus       180 ~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------  231 (290)
T 3fme_A          180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS----------------------------  231 (290)
T ss_dssp             HHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC----------------------------
T ss_pred             hcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC----------------------------
Confidence            97   33334899999999999999999999999863 33344333322110                            


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        ........++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       232 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          232 --PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             --CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             --CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence              00112356889999999999999999999999999999975

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=5.5e-34  Score=275.89  Aligned_cols=157  Identities=10%  Similarity=0.059  Sum_probs=130.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+....    .....+| +.|+|||++
T Consensus       205 ~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~  279 (413)
T 3dzo_A          205 HKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----SAVSPIG-RGFAPPETT  279 (413)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTE----EECCCCC-TTTCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCC----ccccCCC-CceeCchhh
Confidence            45677888888999999999999999999999999999999999999999999987532    2455678 999999999


Q ss_pred             h---------cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC
Q psy2865         158 M---------GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS  228 (395)
Q Consensus       158 ~---------~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (395)
                      .         ....|+.++|||||||++|+|++|..||.+.+.......                               
T Consensus       280 ~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~-------------------------------  328 (413)
T 3dzo_A          280 AERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW-------------------------------  328 (413)
T ss_dssp             HHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGG-------------------------------
T ss_pred             hccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHH-------------------------------
Confidence            3         222378899999999999999999999987653321111                               


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                           .+......+..+.+||.+||..||.+|||+.++|+||||...
T Consensus       329 -----~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          329 -----IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             -----GGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             -----HHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence                 112234667899999999999999999999999999999763

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=1.2e-32  Score=252.84  Aligned_cols=160  Identities=18%  Similarity=0.263  Sum_probs=138.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++.....   ......+||+.|+|||++.
T Consensus       109 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~~~y~aPE~~~  185 (284)
T 2vgo_A          109 GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS---LRRRTMCGTLDYLPPEMIE  185 (284)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS---SCBCCCCSCGGGCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc---cccccccCCCCcCCHHHhc
Confidence            4688888999999999999999999999999999999999999999999999976532   2234568899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|||||||++|+|++|..||.+.+..+....+...                                ...++
T Consensus       186 ~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--------------------------------~~~~~  232 (284)
T 2vgo_A          186 GKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--------------------------------DLKFP  232 (284)
T ss_dssp             TCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--------------------------------CCCCC
T ss_pred             cCC-CCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc--------------------------------ccCCC
Confidence            875 899999999999999999999999988776665555321                                11234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       233 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~  268 (284)
T 2vgo_A          233 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA  268 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred             CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence            567889999999999999999999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=1.5e-32  Score=258.55  Aligned_cols=164  Identities=27%  Similarity=0.322  Sum_probs=140.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++....... ......+||+.|+|||++
T Consensus       135 ~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~  213 (335)
T 2owb_A          135 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVL  213 (335)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc-ccccccCCCccccCHHHh
Confidence            3568888999999999999999999999999999999999999999999999998754322 234456899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|..||.+....+.+..+...                                ...+
T Consensus       214 ~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--------------------------------~~~~  260 (335)
T 2owb_A          214 SKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--------------------------------EYSI  260 (335)
T ss_dssp             HTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--------------------------------CCCC
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--------------------------------CCCC
Confidence            8876 899999999999999999999999988766655554321                                1234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      +...++.+.+||.+||..||.+|||+.++|+||||..+
T Consensus       261 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          261 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             CccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence            45678899999999999999999999999999999764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1e-32  Score=260.49  Aligned_cols=166  Identities=20%  Similarity=0.253  Sum_probs=132.5

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC--CeEEeeCCcccccCCCC---CCCcccccccccccchh
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY--SSKICDFGLARVEEPDP---NKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~--~vKl~DFGla~~~~~~~---~~~~~~~~~t~~y~aPE  155 (395)
                      +++..+..++.||+.||.|||+.||+||||||+|||++.++  .+||+|||+|+......   .......+||+.|+|||
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  244 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE  244 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCch
Confidence            45566778999999999999999999999999999998766  89999999998643211   12245568999999999


Q ss_pred             hhhcC-CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGA-RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~-~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+. ..|+.++|||||||++|+|++|..||.+.+..+.+..+........                            
T Consensus       245 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------  296 (345)
T 3hko_A          245 VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE----------------------------  296 (345)
T ss_dssp             HHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTT----------------------------
T ss_pred             hhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccC----------------------------
Confidence            99752 3489999999999999999999999999888877776654221111                            


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .......++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       297 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          297 NPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ  336 (345)
T ss_dssp             SGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred             CcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence            1122346789999999999999999999999999999976

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=6.9e-33  Score=268.66  Aligned_cols=166  Identities=24%  Similarity=0.307  Sum_probs=125.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC---CeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY---SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~---~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++   .+||+|||+|+....  .......+||+.|+|||
T Consensus       234 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE  311 (419)
T 3i6u_A          234 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPE  311 (419)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------CTTCCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCC--CccccccCCCCCccCce
Confidence            3577888889999999999999999999999999999997544   599999999987643  23345678999999999


Q ss_pred             hhhc--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHH-HHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         156 ILMG--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGL-ITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       156 vl~~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~-i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ++.+  ...|+.++|||||||++|+|++|.+||.+......+.. +........                          
T Consensus       312 ~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~--------------------------  365 (419)
T 3i6u_A          312 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI--------------------------  365 (419)
T ss_dssp             TTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCC--------------------------
T ss_pred             eeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCC--------------------------
Confidence            9864  23488899999999999999999999987654433332 222111111                          


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        ...+...++.+.+||.+||..||.+|||+.|+|+||||..
T Consensus       366 --~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          366 --PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             --HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             --chhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence              1223567889999999999999999999999999999976

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=1.5e-32  Score=254.91  Aligned_cols=164  Identities=24%  Similarity=0.349  Sum_probs=138.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee---cCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY---QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~---~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+||++   +.++.++|+|||++.....   ......+||+.|+|||
T Consensus       101 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~~~y~aPE  177 (304)
T 2jam_A          101 GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN---GIMSTACGTPGYVAPE  177 (304)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC---BTTHHHHSCCCBCCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC---CccccccCCCCccChH
Confidence            467888899999999999999999999999999999999   7788999999999976432   2344567999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. ++.++||||+||++|+|++|..||.+.+....+..+.......+                            .
T Consensus       178 ~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~----------------------------~  228 (304)
T 2jam_A          178 VLAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE----------------------------S  228 (304)
T ss_dssp             TBSSCS-CCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCC----------------------------T
T ss_pred             HhccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------c
Confidence            998765 89999999999999999999999998887777666654221110                            1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  267 (304)
T 2jam_A          229 PFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG  267 (304)
T ss_dssp             TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence            233567889999999999999999999999999999975

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=4.4e-32  Score=249.96  Aligned_cols=163  Identities=19%  Similarity=0.175  Sum_probs=132.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||+.|  |+||||||+|||++ .++.+||+|||++.....   ......+||+.|+||
T Consensus       123 ~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~t~~y~aP  199 (290)
T 1t4h_A          123 FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAP  199 (290)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT---TSBEESCSSCCCCCG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc---cccccccCCcCcCCH
Confidence            356788888999999999999999999  99999999999998 789999999999976432   234456899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+  .++.++||||+||++|+|++|..||.+......+...... +.                            ..
T Consensus       200 E~~~~--~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~----------------------------~~  248 (290)
T 1t4h_A          200 EMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GV----------------------------KP  248 (290)
T ss_dssp             GGGGT--CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TC----------------------------CC
T ss_pred             HHHhc--cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc-cC----------------------------Cc
Confidence            98864  3899999999999999999999999876554443332211 00                            01


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++...++.+.+||.+||..||.+|||+.++|+||||.+
T Consensus       249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            1233456788999999999999999999999999999975

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=3.4e-32  Score=251.16  Aligned_cols=164  Identities=27%  Similarity=0.330  Sum_probs=139.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++....... ......++|+.|+|||++
T Consensus       109 ~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~  187 (294)
T 2rku_A          109 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVL  187 (294)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc-cccccccCCCCcCCcchh
Confidence            3568888999999999999999999999999999999999999999999999998754322 234456789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|..||.+....+.+..+..                                ....+
T Consensus       188 ~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--------------------------------~~~~~  234 (294)
T 2rku_A          188 SKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK--------------------------------NEYSI  234 (294)
T ss_dssp             TTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--------------------------------TCCCC
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh--------------------------------ccCCC
Confidence            8765 89999999999999999999999998876665544432                                11234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      +...++.+.+||.+||..||.+|||+.++|+||||..+
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          235 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             ccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence            45678899999999999999999999999999999763

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=9e-33  Score=252.89  Aligned_cols=162  Identities=27%  Similarity=0.342  Sum_probs=112.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++....... ......++|+.|+|||++.
T Consensus       107 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  185 (278)
T 3cok_A          107 KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-EKHYTLCGTPNYISPEIAT  185 (278)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC-CcceeccCCCCcCCcchhc
Confidence            457888889999999999999999999999999999999999999999999998754322 2233457899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++||||+||++|+|++|.+||.+.+....+..+.                                ...+..+
T Consensus       186 ~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--------------------------------~~~~~~~  232 (278)
T 3cok_A          186 RSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV--------------------------------LADYEMP  232 (278)
T ss_dssp             -------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC--------------------------------SSCCCCC
T ss_pred             CCC-CCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh--------------------------------hcccCCc
Confidence            765 8999999999999999999999998765443322211                                0112344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       233 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          233 SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred             cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence            567889999999999999999999999999999975

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=5.6e-32  Score=250.88  Aligned_cols=164  Identities=17%  Similarity=0.232  Sum_probs=137.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++....... ........+|+.|+|||++
T Consensus       104 ~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  183 (305)
T 2wtk_C          104 KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIA  183 (305)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhc
Confidence            457888888999999999999999999999999999999999999999999998754321 2223455789999999999


Q ss_pred             hcCC-CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGAR-HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~-~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. .++.++|||||||++|+|++|..||.+.+....+..+...                                ...
T Consensus       184 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~--------------------------------~~~  231 (305)
T 2wtk_C          184 NGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--------------------------------SYA  231 (305)
T ss_dssp             TCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--------------------------------CCC
T ss_pred             cCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC--------------------------------CCC
Confidence            7643 2477999999999999999999999988766655555321                                123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ++...++.+.+||.+||..||.+|||+.++++||||..
T Consensus       232 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  269 (305)
T 2wtk_C          232 IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK  269 (305)
T ss_dssp             CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred             CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence            44567889999999999999999999999999999976

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.97  E-value=9.7e-33  Score=258.17  Aligned_cols=157  Identities=17%  Similarity=0.232  Sum_probs=132.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||+++....   .......||+.|+|||+
T Consensus       143 ~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~---~~~~~~~gt~~y~aPE~  219 (320)
T 3a99_A          143 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDFDGTRVYSPPEW  219 (320)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCS---SCBCCCCSCGGGSCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccc---ccccCCCCCccCCChHH
Confidence            35678888899999999999999999999999999999999 788999999999987642   23455689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...++.++|||||||++|+|++|..||.+...      +..                                ....
T Consensus       220 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~--------------------------------~~~~  261 (320)
T 3a99_A          220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIR--------------------------------GQVF  261 (320)
T ss_dssp             HHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH--------------------------------CCCC
T ss_pred             hccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhc--------------------------------cccc
Confidence            98776457889999999999999999999975321      110                                0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      +....++.+.+||.+||..||.+|||+.++++||||...
T Consensus       262 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          262 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence            345678899999999999999999999999999999874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=4.6e-32  Score=248.73  Aligned_cols=166  Identities=19%  Similarity=0.225  Sum_probs=136.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC----CeEEeeCCcccccCCCCCCCcccccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY----SSKICDFGLARVEEPDPNKAMTQEVVTQYYRA  153 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~----~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a  153 (395)
                      ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++    .++|+|||++......  ......++|+.|+|
T Consensus       102 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~a  179 (283)
T 3bhy_A          102 KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNIFGTPEFVA  179 (283)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------CCCGGGCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCC--CcccccCCCcCccC
Confidence            35688889999999999999999999999999999999998776    7999999999875432  23445679999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+.......+.                          
T Consensus       180 PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------  232 (283)
T 3bhy_A          180 PEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE--------------------------  232 (283)
T ss_dssp             HHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCH--------------------------
T ss_pred             cceecCCC-CCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcc--------------------------
Confidence            99998765 899999999999999999999999998877766666443222111                          


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        ..+...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       233 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          233 --EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             --HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             --hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence              123466788999999999999999999999999999976

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.97  E-value=2.7e-32  Score=249.42  Aligned_cols=162  Identities=21%  Similarity=0.313  Sum_probs=128.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......  ......++|+.|+|||++.
T Consensus       106 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~  183 (276)
T 2h6d_A          106 GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRTSCGSPNYAAPEVIS  183 (276)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---------------CCTGGGT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC--cceecccCCccccCHHHHc
Confidence            45788888999999999999999999999999999999999999999999999875432  2234557899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++|||||||++|+|++|..||.+.+....+..+...                                ....+
T Consensus       184 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--------------------------------~~~~~  231 (276)
T 2h6d_A          184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--------------------------------VFYIP  231 (276)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCCCC
T ss_pred             CCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC--------------------------------cccCc
Confidence            7663468999999999999999999999887766555554321                                11234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+|||+.++++||||..
T Consensus       232 ~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~  267 (276)
T 2h6d_A          232 EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ  267 (276)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHT
T ss_pred             hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhcc
Confidence            556789999999999999999999999999999975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.97  E-value=9.5e-32  Score=248.52  Aligned_cols=167  Identities=20%  Similarity=0.271  Sum_probs=138.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.....  .......++|+.|+|||++
T Consensus       118 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~  195 (298)
T 1phk_A          118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLREVCGTPSYLAPEII  195 (298)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT--TCCBCCCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCC--CcccccccCCccccCHHHh
Confidence            35688889999999999999999999999999999999999999999999999987543  2334556899999999998


Q ss_pred             hc-----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         158 MG-----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       158 ~~-----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      .+     ...++.++|||||||++|+|++|..||.+.+....+..+.......+                          
T Consensus       196 ~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------  249 (298)
T 1phk_A          196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG--------------------------  249 (298)
T ss_dssp             HHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--------------------------
T ss_pred             ccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccC--------------------------
Confidence            62     23478899999999999999999999998887766666544211110                          


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        .......+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       250 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (298)
T 1phk_A          250 --SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  289 (298)
T ss_dssp             --TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             --cccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhh
Confidence              0112356788999999999999999999999999999976

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=4.7e-32  Score=248.88  Aligned_cols=157  Identities=17%  Similarity=0.069  Sum_probs=127.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-------------------CCeEEeeCCcccccCCCCC
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-------------------YSSKICDFGLARVEEPDPN  139 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-------------------~~vKl~DFGla~~~~~~~~  139 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.+                   ..++|+|||++.....   
T Consensus       110 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---  186 (289)
T 1x8b_A          110 SYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS---  186 (289)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTC---
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCC---
Confidence            568889999999999999999999999999999999999844                   4799999999987542   


Q ss_pred             CCcccccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhh
Q psy2865         140 KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKC  219 (395)
Q Consensus       140 ~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~  219 (395)
                        .....+|+.|+|||++.+...++.++|||||||++|+|++|.++|.....   +..+..  +                
T Consensus       187 --~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~--~----------------  243 (289)
T 1x8b_A          187 --PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQ--G----------------  243 (289)
T ss_dssp             --SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHT--T----------------
T ss_pred             --ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHc--C----------------
Confidence              22346899999999998765577899999999999999999988755432   222211  0                


Q ss_pred             hhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         220 HMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                                   ....++...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       244 -------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          244 -------------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             -------------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred             -------------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence                         112345678899999999999999999999999999999975

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=6.8e-32  Score=252.78  Aligned_cols=165  Identities=18%  Similarity=0.206  Sum_probs=129.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++...... .......++|+.|+|||++.
T Consensus       124 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  202 (326)
T 2x7f_A          124 NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-VGRRNTFIGTPYWMAPEVIA  202 (326)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC--------------CCGGGCCHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcC-ccccccccCCccccChhhhc
Confidence            56788888999999999999999999999999999999999999999999999865432 12234568999999999986


Q ss_pred             c----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         159 G----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       159 ~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +    ...++.++|||||||++|+|++|..||.+.+....+..+.....                              .
T Consensus       203 ~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~  252 (326)
T 2x7f_A          203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA------------------------------P  252 (326)
T ss_dssp             --------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC------------------------------C
T ss_pred             cccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc------------------------------c
Confidence            2    22488999999999999999999999988776665554432110                              0


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .......+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       253 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~  292 (326)
T 2x7f_A          253 RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD  292 (326)
T ss_dssp             CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred             cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence            0123456789999999999999999999999999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=8.1e-32  Score=246.10  Aligned_cols=166  Identities=19%  Similarity=0.230  Sum_probs=133.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++|+.|+|||++
T Consensus       100 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (276)
T 2yex_A          100 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  179 (276)
T ss_dssp             TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGG
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHH
Confidence            357778888999999999999999999999999999999999999999999998643211 1224456889999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhH-HHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQ-LGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~-l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+...++.++|||||||++|+|++|..||.+.+.... +..+....                              ....
T Consensus       180 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~~  229 (276)
T 2yex_A          180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK------------------------------TYLN  229 (276)
T ss_dssp             TCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC------------------------------TTST
T ss_pred             hcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc------------------------------cccC
Confidence            8766457889999999999999999999987654322 22221100                              0011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .....++.+.+||.+||..||.+|||+.++++||||..
T Consensus       230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (276)
T 2yex_A          230 PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (276)
T ss_dssp             TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccC
Confidence            12356788999999999999999999999999999976

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.97  E-value=5.8e-32  Score=250.37  Aligned_cols=175  Identities=20%  Similarity=0.214  Sum_probs=132.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC----CCCcccccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP----NKAMTQEVVTQYYRA  153 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~----~~~~~~~~~t~~y~a  153 (395)
                      ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++.......    .......++|+.|+|
T Consensus       115 ~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~a  194 (303)
T 2vwi_A          115 SGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA  194 (303)
T ss_dssp             TCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccC
Confidence            3457888899999999999999999999999999999999999999999999998654321    112234578999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+...++.++|||||||++|+|++|..||.+......+.......  ++.                    ......
T Consensus       195 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~--------------------~~~~~~  252 (303)
T 2vwi_A          195 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND--PPS--------------------LETGVQ  252 (303)
T ss_dssp             HHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSS--CCC--------------------TTC---
T ss_pred             HHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccC--CCc--------------------cccccc
Confidence            9999764448999999999999999999999999877665544332211  100                    000001


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ........+..+.+||.+||..||.+|||+.++++||||..
T Consensus       253 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  293 (303)
T 2vwi_A          253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK  293 (303)
T ss_dssp             --CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC--
T ss_pred             cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhc
Confidence            12334567889999999999999999999999999999976

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=4.9e-32  Score=252.31  Aligned_cols=168  Identities=21%  Similarity=0.258  Sum_probs=133.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......  ......+||+.|+|||
T Consensus       110 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE  189 (311)
T 3ork_A          110 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE  189 (311)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHH
Confidence            34688889999999999999999999999999999999999999999999999986543221  2233457899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. ++.++|||||||++|+|++|..||.+.+.......+......++                            .
T Consensus       190 ~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------~  240 (311)
T 3ork_A          190 QARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP----------------------------S  240 (311)
T ss_dssp             HHHTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCH----------------------------H
T ss_pred             HhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCc----------------------------c
Confidence            998876 89999999999999999999999999887766555543221111                            1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......+..+.+||.+||..||.+||++.++|.|+|+..
T Consensus       241 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          241 ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            234567889999999999999999999999999999964

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=8.9e-32  Score=252.26  Aligned_cols=156  Identities=24%  Similarity=0.300  Sum_probs=120.8

Q ss_pred             CCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-----------CCcccccccccccc
Q psy2865          85 RKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-----------KAMTQEVVTQYYRA  153 (395)
Q Consensus        85 ~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-----------~~~~~~~~t~~y~a  153 (395)
                      .+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......           ......+||+.|+|
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            3678999999999999999999999999999999999999999999987654211           22345689999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+.. ++.++||||+||++|+|++|..++.     .....+........+                          
T Consensus       245 PE~~~~~~-~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~~~~~~~--------------------------  292 (332)
T 3qd2_B          245 PEQIHGNN-YSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDVRNLKFP--------------------------  292 (332)
T ss_dssp             HHHHHCCC-CCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHHHTTCCC--------------------------
T ss_pred             hHHhcCCC-CcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHhhccCCC--------------------------
Confidence            99998876 8999999999999999999866542     111111111111100                          


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        ......++.+.+||.+||..||.+|||+.++|+||||.+
T Consensus       293 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          293 --LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             --HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             --cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence              011233567889999999999999999999999999974

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=249.50  Aligned_cols=166  Identities=16%  Similarity=0.230  Sum_probs=137.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||..||+|+||+|+||+++.++.++|+|||++...... ........+|+.|+|||++
T Consensus       119 ~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~  197 (314)
T 3com_A          119 NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVI  197 (314)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT-BSCBCCCCSCGGGCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh-ccccCccCCCCCccChhhc
Confidence            456888889999999999999999999999999999999999999999999999865432 1233456789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|..||.+.+....+..+.....                             .....
T Consensus       198 ~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------------------~~~~~  247 (314)
T 3com_A          198 QEIG-YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP-----------------------------PTFRK  247 (314)
T ss_dssp             SSSC-BCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-----------------------------CCCSS
T ss_pred             CCCC-CCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-----------------------------cccCC
Confidence            8875 89999999999999999999999988776554443322110                             01112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~  284 (314)
T 3com_A          248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS  284 (314)
T ss_dssp             GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhc
Confidence            3446788999999999999999999999999999976

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.97  E-value=1.3e-31  Score=250.57  Aligned_cols=167  Identities=24%  Similarity=0.315  Sum_probs=132.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC---eEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS---SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~---vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.   +||+|||+++....  .......+||+.|+|||
T Consensus       109 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~gt~~y~aPE  186 (322)
T 2ycf_A          109 KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPE  186 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCC--CHHHHHHHSCCTTCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccc--ccccccccCCcCccCch
Confidence            45788888899999999999999999999999999999987654   99999999987542  12234557899999999


Q ss_pred             hhhc--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHH-HHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         156 ILMG--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQL-GLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       156 vl~~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l-~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ++.+  ...++.++|||||||++|+|++|..||.+......+ ..+........                          
T Consensus       187 ~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------  240 (322)
T 2ycf_A          187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI--------------------------  240 (322)
T ss_dssp             HHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCC--------------------------
T ss_pred             hhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccC--------------------------
Confidence            9852  334889999999999999999999999876543322 22222111111                          


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                        ...+...+..+.+||.+||..||.+|||+.++|+||||...
T Consensus       241 --~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          241 --PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             --HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             --chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence              11234578899999999999999999999999999999764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=5e-32  Score=257.40  Aligned_cols=193  Identities=17%  Similarity=0.191  Sum_probs=132.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.|++.||.|||+. ||+||||||+|||++.++.++|+|||++.....   ......+||+.|+|||+
T Consensus       125 ~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~~~~~~~gt~~y~aPE~  201 (360)
T 3eqc_A          125 AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPER  201 (360)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---HC----CCCCTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc---ccccCCCCCCCeECHHH
Confidence            34688888999999999999999996 999999999999999999999999999975421   22345689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHH-hcCCCCHHHHHhhhhhhhhhhh-hccccCCc----
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITD-LLGTPTPEEMRHACDGAKCHML-RQTRKSQS----  230 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~----  230 (395)
                      +.+.. |+.++|||||||++|+|++|..||.+.+..+....+.. ..+.+................. ........    
T Consensus       202 ~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (360)
T 3eqc_A          202 LQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFEL  280 (360)
T ss_dssp             HTTCC-CSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHH
T ss_pred             HcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhh
Confidence            98875 89999999999999999999999998776554333211 1111111100000000000000 00000000    


Q ss_pred             cc------hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         231 LS------SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       231 ~~------~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..      .........+..+.+||.+||.+||.+|||+.++|+||||..
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  330 (360)
T 3eqc_A          281 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  330 (360)
T ss_dssp             HHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred             hhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence            00      000112346889999999999999999999999999999975

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=1.2e-31  Score=253.37  Aligned_cols=180  Identities=17%  Similarity=0.193  Sum_probs=135.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.++|+|||++.....   .......+|+.|+|||++
T Consensus       146 ~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~y~aPE~~  222 (348)
T 2pml_X          146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD---KKIKGSRGTYEFMPPEFF  222 (348)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBT---TEECSSCSCGGGCCGGGG
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEecccccccccc---ccccCCCCCcCccCchhh
Confidence            456777788899999999999999 9999999999999999999999999999987532   234556899999999999


Q ss_pred             hcCCCCCc-cchHHhHHHHHHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGARHYSA-AVDVWSVGCIFAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~~~~~~-~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+...++. ++|||||||++|+|++|..||.+.+. ...+..+.......+..         .....    .........
T Consensus       223 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~---------~~~~~----~~~~~~~~~  289 (348)
T 2pml_X          223 SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLD---------RNHFL----YPLTNKKST  289 (348)
T ss_dssp             SSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCS---------SSSST----TTTCC----
T ss_pred             cCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccc---------hhhhh----ccccccccc
Confidence            87644666 99999999999999999999998776 44444443211110000         00000    000000011


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       290 ~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~  328 (348)
T 2pml_X          290 CSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD  328 (348)
T ss_dssp             ----CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred             cchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence            223567899999999999999999999999999999976

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.97  E-value=8.5e-32  Score=249.31  Aligned_cols=167  Identities=18%  Similarity=0.201  Sum_probs=132.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++...... .......+||+.|+|||++
T Consensus       111 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~  189 (302)
T 2j7t_A          111 DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQKRDSFIGTPYWMAPEVV  189 (302)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC-----CCGGGCCHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccccccccCChhhcCCeee
Confidence            456888899999999999999999999999999999999999999999999997642110 1122345789999999998


Q ss_pred             h----cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         158 M----GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       158 ~----~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      .    ....++.++|||||||++|+|++|..||.+.+....+..+......                             
T Consensus       190 ~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------  240 (302)
T 2j7t_A          190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPP-----------------------------  240 (302)
T ss_dssp             HHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-----------------------------
T ss_pred             ccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCc-----------------------------
Confidence            5    2334889999999999999999999999988776655554331100                             


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+...+..+.+||.+||..||.+|||+.++++||||..
T Consensus       241 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  281 (302)
T 2j7t_A          241 TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS  281 (302)
T ss_dssp             CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred             ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence            01122446788999999999999999999999999999976

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=3.4e-32  Score=256.27  Aligned_cols=168  Identities=21%  Similarity=0.323  Sum_probs=110.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+++....   ......++|+.|+|||
T Consensus       123 ~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~t~~y~aPE  199 (336)
T 3fhr_A          123 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ---NALQTPCYTPYYVAPE  199 (336)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc---cccccCCCCcCccChh
Confidence            35888899999999999999999999999999999999986   45599999999986532   2344568899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++|||||||++|+|++|..||.+.........+......                        .......
T Consensus       200 ~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------------------~~~~~~~  254 (336)
T 3fhr_A          200 VLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL------------------------GQYGFPN  254 (336)
T ss_dssp             ----CH-HHHHHHHHHHHHHHHHHHHSSCCC---------------------------------------------CCCT
T ss_pred             hhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc------------------------cccccCc
Confidence            997765 899999999999999999999999876543322111110000                        0000001


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence            223467889999999999999999999999999999975

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.97  E-value=2.8e-31  Score=258.13  Aligned_cols=167  Identities=19%  Similarity=0.223  Sum_probs=120.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-----CCCeEEeeCCcccccCCCCC--CCccccccccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-----TYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYR  152 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-----~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~  152 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.     ...+||+|||+|+.......  ...+..+||+.|+
T Consensus       114 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~  193 (432)
T 3p23_A          114 AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI  193 (432)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSC
T ss_pred             CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCcc
Confidence            3556677789999999999999999999999999999953     33578999999987643211  2345568999999


Q ss_pred             chhhhhc--CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         153 APEILMG--ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       153 aPEvl~~--~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      |||++.+  ...++.++|||||||++|+|++ |.+||...... +...+.   +....                      
T Consensus       194 APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-~~~~~~---~~~~~----------------------  247 (432)
T 3p23_A          194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-QANILL---GACSL----------------------  247 (432)
T ss_dssp             CGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-HHHHHT---TCCCC----------------------
T ss_pred             ChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-HHHHHh---ccCCc----------------------
Confidence            9999974  2237789999999999999999 89999654332 222221   11100                      


Q ss_pred             ccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                         .........+..+.+||.+||..||.+|||+.++|+||||...
T Consensus       248 ---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          248 ---DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             ---TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             ---cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence               0000111234568899999999999999999999999999763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=2.8e-31  Score=246.10  Aligned_cols=163  Identities=20%  Similarity=0.197  Sum_probs=137.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... ......++|+.|+|||++.
T Consensus       114 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  192 (303)
T 3a7i_A          114 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIK  192 (303)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CCBCCCCSCGGGCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc-cccCccCCCcCccCHHHHh
Confidence            457888889999999999999999999999999999999999999999999998754321 2334568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|||||||++|+|++|.+||.+......+..+....                               ...+.
T Consensus       193 ~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~~  240 (303)
T 3a7i_A          193 QSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-------------------------------PPTLE  240 (303)
T ss_dssp             TCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-------------------------------CCCCC
T ss_pred             cCC-CCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC-------------------------------CCCCc
Confidence            875 8999999999999999999999998877665554443210                               11234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       241 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          241 GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred             cccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence            567889999999999999999999999999999964

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.97  E-value=2.4e-31  Score=245.99  Aligned_cols=165  Identities=21%  Similarity=0.255  Sum_probs=122.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-------------CCCcccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-------------NKAMTQE  145 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-------------~~~~~~~  145 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++.......             .......
T Consensus       111 ~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (303)
T 1zy4_A          111 LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA  190 (303)
T ss_dssp             GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC----------------------
T ss_pred             cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccC
Confidence            456667778899999999999999999999999999999999999999999998653211             1223456


Q ss_pred             cccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC-ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc
Q psy2865         146 VVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ-SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ  224 (395)
Q Consensus       146 ~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~-~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  224 (395)
                      +||+.|+|||++.+...++.++||||+||++|+|++   ||... +....+..+.......                   
T Consensus       191 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~-------------------  248 (303)
T 1zy4_A          191 IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEF-------------------  248 (303)
T ss_dssp             ---CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCC-------------------
T ss_pred             CCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhcccccccc-------------------
Confidence            789999999999876558999999999999999998   44322 2222222222111000                   


Q ss_pred             cccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         225 TRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                               ...+....+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       249 ---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          249 ---------PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             ---------CTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             ---------CccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence                     01234556778999999999999999999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=4.9e-31  Score=243.28  Aligned_cols=164  Identities=21%  Similarity=0.253  Sum_probs=128.5

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      +++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.+||+|||++...... ........||+.|+|||++.+
T Consensus       119 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~  197 (295)
T 2clq_A          119 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI-NPCTETFTGTLQYMAPEIIDK  197 (295)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCC-CCcccccCCCccccChhhhcC
Confidence            446667788999999999999999999999999999987 899999999999875431 222345678999999999976


Q ss_pred             CC-CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 AR-HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~-~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. .++.++|||||||++|+|++|..||.+...............                             ....++
T Consensus       198 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~~  248 (295)
T 2clq_A          198 GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-----------------------------VHPEIP  248 (295)
T ss_dssp             GGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC-----------------------------CCCCCC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc-----------------------------cccccc
Confidence            42 378999999999999999999999976443221111110000                             011344


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~  284 (295)
T 2clq_A          249 ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV  284 (295)
T ss_dssp             TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhh
Confidence            567889999999999999999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.96  E-value=2.7e-31  Score=258.65  Aligned_cols=166  Identities=22%  Similarity=0.284  Sum_probs=119.8

Q ss_pred             cCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC-------------CCeEEeeCCcccccCCCCCC---Ccccc
Q psy2865          82 SSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT-------------YSSKICDFGLARVEEPDPNK---AMTQE  145 (395)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~-------------~~vKl~DFGla~~~~~~~~~---~~~~~  145 (395)
                      ++..+..++.||+.||.|||+.||+||||||+|||++.+             +.+||+|||+|+........   .....
T Consensus       113 ~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~  192 (434)
T 2rio_A          113 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP  192 (434)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC------------
T ss_pred             cchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCC
Confidence            455667899999999999999999999999999999754             47999999999876542211   23456


Q ss_pred             cccccccchhhhhcC------CCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhh
Q psy2865         146 VVTQYYRAPEILMGA------RHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAK  218 (395)
Q Consensus       146 ~~t~~y~aPEvl~~~------~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~  218 (395)
                      +||+.|+|||++.+.      ..++.++|||||||++|+|++ |..||.+.....  ..+.......+            
T Consensus       193 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~------------  258 (434)
T 2rio_A          193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLD------------  258 (434)
T ss_dssp             --CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCC------------
T ss_pred             CCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcc------------
Confidence            899999999999761      348999999999999999998 999997654332  22221110000            


Q ss_pred             hhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         219 CHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                                 ..  ........++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       259 -----------~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          259 -----------EM--KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             -----------CC--TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             -----------cc--cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence                       00  00001123468899999999999999999999999999965

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=4.8e-31  Score=246.78  Aligned_cols=163  Identities=16%  Similarity=0.172  Sum_probs=125.8

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....... .......+|+.|+|||++.
T Consensus       133 ~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  212 (323)
T 3qup_A          133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA  212 (323)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhc
Confidence            578888999999999999999999999999999999999999999999999986543211 1223345678899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |.+||.+.+....+..+....                               ....
T Consensus       213 ~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  260 (323)
T 3qup_A          213 DNL-YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN-------------------------------RLKQ  260 (323)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-------------------------------CCCC
T ss_pred             CCC-CCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC-------------------------------CCCC
Confidence            876 8999999999999999999 999999988777666654311                               1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcC-------HHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRIS-------VNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~t-------a~e~L~Hp~f~~  274 (395)
                      +...+..+.+||.+||..||.+|||       +++++.|||+..
T Consensus       261 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~  304 (323)
T 3qup_A          261 PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS  304 (323)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred             CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence            4567889999999999999999999       777899999965

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.96  E-value=7.2e-31  Score=244.26  Aligned_cols=163  Identities=18%  Similarity=0.244  Sum_probs=126.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.|  |+||||||+|||++.++.+||+|||+++..... .......+||+.|+|||+
T Consensus       132 ~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~  210 (309)
T 3p86_A          132 EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST-FLSSKSAAGTPEWMAPEV  210 (309)
T ss_dssp             HHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------------------CCTTSCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc-ccccccCCCCccccChhh
Confidence            35888888999999999999999999  999999999999999999999999999864332 122345689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|||||||++|+|++|..||.+.+....+..+....                              ....
T Consensus       211 ~~~~~-~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~------------------------------~~~~  259 (309)
T 3p86_A          211 LRDEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC------------------------------KRLE  259 (309)
T ss_dssp             HTTCC-CCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSC------------------------------CCCC
T ss_pred             hcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC------------------------------CCCC
Confidence            98876 8999999999999999999999999887766655543211                              1123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc--CCccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC--HPYLD  273 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~--Hp~f~  273 (395)
                      .+...++.+.+||.+||..||.+|||+.++++  ++++.
T Consensus       260 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          260 IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            45678899999999999999999999999987  45553

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.96  E-value=2.9e-31  Score=247.02  Aligned_cols=155  Identities=17%  Similarity=0.272  Sum_probs=131.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+||+++ .++.+||+|||+++....   .......+|..|+|||++
T Consensus       134 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~y~aPE~~  210 (312)
T 2iwi_A          134 GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD---EPYTDFDGTRVYSPPEWI  210 (312)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCS---SCBCCCCSCTTTSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhccc---CcccccCCcccccCceee
Confidence            4588888999999999999999999999999999999999 889999999999987643   234556899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++|||||||++|+|++|..||.+...      +..                                ....+
T Consensus       211 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~--------------------------------~~~~~  252 (312)
T 2iwi_A          211 SRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILE--------------------------------AELHF  252 (312)
T ss_dssp             HHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH--------------------------------TCCCC
T ss_pred             ecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhh--------------------------------hccCC
Confidence            8766445689999999999999999999975321      111                                11224


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       253 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~  289 (312)
T 2iwi_A          253 PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT  289 (312)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence            4567889999999999999999999999999999976

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=2.6e-31  Score=243.25  Aligned_cols=162  Identities=23%  Similarity=0.309  Sum_probs=134.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccC-----ccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDG-----YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~-----iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      .+++..+..++.||+.||.|||+.|     |+||||+|+||+++.++.+||+|||+++..... ........+|+.|+||
T Consensus       107 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aP  185 (279)
T 2w5a_A          107 YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKTFVGTPYYMSP  185 (279)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC----CHHHHHHHSCCTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc-cccccccCCCccccCh
Confidence            4888899999999999999999999     999999999999999999999999999875422 1122345789999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. ++.++|||||||++|+|++|..||.+.+.......+....                               .
T Consensus       186 E~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~-------------------------------~  233 (279)
T 2w5a_A          186 EQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-------------------------------F  233 (279)
T ss_dssp             HHHHCC--CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-------------------------------C
T ss_pred             HHhccCC-CCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc-------------------------------c
Confidence            9998875 8999999999999999999999999887666555553311                               1


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++...+..+.+||.+||..||.+|||+.++|+|+|+..
T Consensus       234 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence            1234567889999999999999999999999999999976

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=5.5e-31  Score=242.26  Aligned_cols=164  Identities=24%  Similarity=0.363  Sum_probs=135.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCC---CCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQAT---YSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~---~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.+   +.+||+|||++......  ......++|+.|+|||
T Consensus       116 ~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE  193 (287)
T 2wei_A          116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPE  193 (287)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC--SSCSCHHHHHTTCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC--CccccccCcccccChH
Confidence            468888999999999999999999999999999999999754   46999999999875432  2344557899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.  ++.++|||||||++|+|++|..||.+.+..+.+..+.......+                            .
T Consensus       194 ~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~  243 (287)
T 2wei_A          194 VLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD----------------------------L  243 (287)
T ss_dssp             HHTTC--CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----------------------------S
T ss_pred             HhcCC--CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------c
Confidence            98763  89999999999999999999999999887776666543211000                            1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       244 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~  282 (287)
T 2wei_A          244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK  282 (287)
T ss_dssp             GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHH
T ss_pred             hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhc
Confidence            122456889999999999999999999999999999975

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=5.9e-32  Score=252.63  Aligned_cols=185  Identities=17%  Similarity=0.198  Sum_probs=131.3

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceee----cCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY----QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~----~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +++..+..++.||+.||.|||+.||+||||||+|||+    +.++.+||+|||+|+.....  ......+||+.|+|||+
T Consensus       109 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~  186 (319)
T 4euu_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--EQFVSLYGTEEYLHPDM  186 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT--CCBCCCCSCGGGCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC--CceeecccCCCccCHHH
Confidence            8888899999999999999999999999999999999    77888999999999876532  33455689999999999


Q ss_pred             hhc-------CCCCCccchHHhHHHHHHHHHcCCCCCCCCChH-hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC
Q psy2865         157 LMG-------ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV-QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS  228 (395)
Q Consensus       157 l~~-------~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (395)
                      +.+       ...|+.++|||||||++|+|++|..||.+.... .....+..+++..+...+........    ..+...
T Consensus       187 ~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~  262 (319)
T 4euu_A          187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN----GPIDWS  262 (319)
T ss_dssp             HHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTT----CCEEEE
T ss_pred             hhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccC----CccccC
Confidence            862       234899999999999999999999999764432 22222222222222211111100000    000000


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      ..+.....+....+..+.+||.+||.+||++|||++|+|+||=
T Consensus       263 ~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          263 GDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             SSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             ccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            0011111223345668899999999999999999999999975

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=3.5e-31  Score=242.88  Aligned_cols=159  Identities=18%  Similarity=0.216  Sum_probs=122.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..............+|+.|+|||++.
T Consensus       111 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (281)
T 1mp8_A          111 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN  190 (281)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcc
Confidence            45788888999999999999999999999999999999999999999999999876433222334446788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |.+||.+.+..+.+..+....                               ....
T Consensus       191 ~~~-~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~-------------------------------~~~~  238 (281)
T 1mp8_A          191 FRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------------------------RLPM  238 (281)
T ss_dssp             HCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-------------------------------CCCC
T ss_pred             cCC-CCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCC-------------------------------CCCC
Confidence            765 8999999999999999996 999999888777666654211                               1124


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...++.+.+||.+||..||.+|||+.+++++
T Consensus       239 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          239 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            46778999999999999999999999999864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.96  E-value=7.2e-31  Score=244.78  Aligned_cols=166  Identities=21%  Similarity=0.241  Sum_probs=125.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+. ||+||||+|+||+++.++.+||+|||++......  ......++|+.|+|||+
T Consensus       118 ~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~  195 (318)
T 2dyl_A          118 QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDRSAGCAAYMAPER  195 (318)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----------------CCTTCCHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC--ccccccCCCccccChhh
Confidence            45688888999999999999999995 9999999999999999999999999999765432  23344578999999999


Q ss_pred             hhc----CCCCCccchHHhHHHHHHHHHcCCCCCCCC-ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         157 LMG----ARHYSAAVDVWSVGCIFAELLGRRILFQAQ-SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       157 l~~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~-~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      +.+    ...++.++|||||||++|+|++|..||.+. .....+..+....  +                          
T Consensus       196 ~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~--------------------------  247 (318)
T 2dyl_A          196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE--P--------------------------  247 (318)
T ss_dssp             HC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC--C--------------------------
T ss_pred             cccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC--C--------------------------
Confidence            852    234889999999999999999999999874 3444444443211  0                          


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       .........++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       248 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          248 -PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             -CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             -CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence             011122457889999999999999999999999999999965

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=4.8e-31  Score=243.72  Aligned_cols=168  Identities=14%  Similarity=0.110  Sum_probs=130.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.............+||+.|+|||++
T Consensus       105 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~  184 (294)
T 4eqm_A          105 HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA  184 (294)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHh
Confidence            34688899999999999999999999999999999999999999999999999987654333334456799999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++||||+||++|+|++|..||.+.+.......+...  ..+                         ......
T Consensus       185 ~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--~~~-------------------------~~~~~~  236 (294)
T 4eqm_A          185 KGEA-TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD--SVP-------------------------NVTTDV  236 (294)
T ss_dssp             HTCC-CCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSS--CCC-------------------------CHHHHS
T ss_pred             cCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhc--cCC-------------------------Ccchhc
Confidence            8876 899999999999999999999999988766554433221  000                         011234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      ....++.+.++|.+||..||.+||+..+.+.+.|..
T Consensus       237 ~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            567789999999999999999999767777776654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.96  E-value=9.6e-31  Score=238.10  Aligned_cols=160  Identities=14%  Similarity=0.170  Sum_probs=133.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++...............+|+.|+|||++
T Consensus        98 ~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  177 (268)
T 3sxs_A           98 GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF  177 (268)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHH
Confidence            45688999999999999999999999999999999999999999999999999987654332233344567789999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++||||+||++|+|++ |..||.+.+.......+.....                               ..
T Consensus       178 ~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~  225 (268)
T 3sxs_A          178 HYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR-------------------------------LY  225 (268)
T ss_dssp             HHSE-EETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-------------------------------CC
T ss_pred             hccC-CchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCC-------------------------------CC
Confidence            8876 8999999999999999998 9999998887766655532111                               11


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...++.+.+||.+||..||.+|||+.++++|
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          226 RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            234467889999999999999999999999985

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=1.3e-30  Score=248.73  Aligned_cols=158  Identities=18%  Similarity=0.180  Sum_probs=130.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .++...+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....... .......+|+.|+|||++.
T Consensus       199 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  278 (370)
T 2psq_A          199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF  278 (370)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhc
Confidence            456667778999999999999999999999999999999999999999999986543221 2234456788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. |+.++|||||||++|||++ |..||.+.+..+.+..+....                               ....
T Consensus       279 ~~~-~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  326 (370)
T 2psq_A          279 DRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-------------------------------RMDK  326 (370)
T ss_dssp             TCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------------------------CCCC
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-------------------------------CCCC
Confidence            876 8999999999999999998 999999887666555443211                               1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+||.+||..||.+|||+.+++++
T Consensus       327 ~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          327 PANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            45678899999999999999999999999874

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=8.3e-31  Score=244.11  Aligned_cols=165  Identities=23%  Similarity=0.284  Sum_probs=125.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++. +.+||+|||++........ ......+||+.|+|||++
T Consensus       122 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  200 (313)
T 3cek_A          122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI  200 (313)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHH
Confidence            46777788899999999999999999999999999999964 8899999999986543221 122345789999999998


Q ss_pred             hcC----------CCCCccchHHhHHHHHHHHHcCCCCCCCCChH-hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc
Q psy2865         158 MGA----------RHYSAAVDVWSVGCIFAELLGRRILFQAQSPV-QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR  226 (395)
Q Consensus       158 ~~~----------~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  226 (395)
                      .+.          ..++.++|||||||++|+|++|..||.+.... ..+..+....                        
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~------------------------  256 (313)
T 3cek_A          201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN------------------------  256 (313)
T ss_dssp             TTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT------------------------
T ss_pred             hhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcc------------------------
Confidence            752          24788999999999999999999999765432 2222221100                        


Q ss_pred             cCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         227 KSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                            ....++...+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       257 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~  298 (313)
T 3cek_A          257 ------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  298 (313)
T ss_dssp             ------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred             ------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence                  011234456788999999999999999999999999999975

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=1.6e-30  Score=240.14  Aligned_cols=162  Identities=14%  Similarity=0.088  Sum_probs=129.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC-----eEEeeCCcccccCCCCC------CCcccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS-----SKICDFGLARVEEPDPN------KAMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~-----vKl~DFGla~~~~~~~~------~~~~~~~~  147 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.     +||+|||+|+.......      ......+|
T Consensus       101 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~g  180 (298)
T 1csn_A          101 RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG  180 (298)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCC
Confidence            45888999999999999999999999999999999999987766     99999999987543221      12345689


Q ss_pred             cccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh---HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc
Q psy2865         148 TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP---VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ  224 (395)
Q Consensus       148 t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~---~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  224 (395)
                      |+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+.   ...+..+......+                   
T Consensus       181 t~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------  240 (298)
T 1csn_A          181 TARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST-------------------  240 (298)
T ss_dssp             CTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS-------------------
T ss_pred             CcccCCchhhcCCC-CChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc-------------------
Confidence            99999999998876 89999999999999999999999988543   33333332211000                   


Q ss_pred             cccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         225 TRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                              .........++.+.+||.+||..||.+|||+.++++
T Consensus       241 --------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          241 --------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             --------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             --------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                    112234567889999999999999999999999876

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=1.8e-30  Score=243.34  Aligned_cols=160  Identities=16%  Similarity=0.135  Sum_probs=130.2

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....... ...+...+|..|+|||+
T Consensus       109 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~  188 (325)
T 3kex_A          109 RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES  188 (325)
T ss_dssp             GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHH
Confidence            35789999999999999999999999999999999999999999999999999997654322 23345567889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|+|++ |..||.+.........+....                               ..
T Consensus       189 ~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~  236 (325)
T 3kex_A          189 IHFGK-YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE-------------------------------RL  236 (325)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTC-------------------------------BC
T ss_pred             hccCC-CChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCC-------------------------------CC
Confidence            98876 8999999999999999999 999999877655555443211                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...+..+.+||.+||..||.+|||+.++++|
T Consensus       237 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          237 AQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            2233456678899999999999999999999986

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=4.7e-31  Score=251.41  Aligned_cols=162  Identities=15%  Similarity=0.175  Sum_probs=133.8

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC---CeEEeeCCcccccCCC-CCCCcccccccccccchh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY---SSKICDFGLARVEEPD-PNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~---~vKl~DFGla~~~~~~-~~~~~~~~~~t~~y~aPE  155 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++   .+||+|||+|+..... ........++|+.|+|||
T Consensus       177 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE  256 (367)
T 3l9p_A          177 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE  256 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHH
Confidence            466777888999999999999999999999999999999554   5999999999754211 112334457899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. |+.++|||||||++|+|++ |.+||.+.+....+..+.....                               
T Consensus       257 ~~~~~~-~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~-------------------------------  304 (367)
T 3l9p_A          257 AFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-------------------------------  304 (367)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC-------------------------------
T ss_pred             HhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------------------------------
Confidence            998876 8999999999999999998 9999999887776666543211                               


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      ...+...+..+.+||.+||..||.+|||+.++++|.|+-
T Consensus       305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            123456788899999999999999999999999998874

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=7.2e-31  Score=246.20  Aligned_cols=160  Identities=16%  Similarity=0.147  Sum_probs=130.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....... .......+|..|+|||+
T Consensus       111 ~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~  190 (327)
T 3poz_A          111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES  190 (327)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHH
Confidence            34578888899999999999999999999999999999999999999999999987643222 22334466889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|+|++ |..||.+.+.......+....                               ..
T Consensus       191 ~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~  238 (327)
T 3poz_A          191 ILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-------------------------------RL  238 (327)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-------------------------------CC
T ss_pred             hccCC-CCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC-------------------------------CC
Confidence            99876 8999999999999999999 999999877665544443211                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...+..+.+||.+||..||.+|||+.+++.+
T Consensus       239 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            2345577899999999999999999999999876

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=6.1e-31  Score=239.61  Aligned_cols=159  Identities=16%  Similarity=0.181  Sum_probs=133.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++...............+|..|+|||++.
T Consensus       101 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (269)
T 4hcu_A          101 GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS  180 (269)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhc
Confidence            45788888899999999999999999999999999999999999999999999875432222334456788899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |.+||.+.+....+..+.....                               ...
T Consensus       181 ~~~-~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  228 (269)
T 4hcu_A          181 FSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------------------------------LYK  228 (269)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-------------------------------CCC
T ss_pred             CCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCcc-------------------------------CCC
Confidence            776 8999999999999999999 9999998887776666543211                               122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...++.+.+||.+||..||.+|||+.++++|
T Consensus       229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            34567889999999999999999999999975

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.96  E-value=9.4e-31  Score=248.35  Aligned_cols=158  Identities=17%  Similarity=0.200  Sum_probs=130.0

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~~  159 (395)
                      +++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....... ...+...+|+.|+|||++.+
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  269 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  269 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcC
Confidence            78888899999999999999999999999999999999999999999999986533221 23345578899999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. |+.++|||||||++|+|++ |.+||.+......+.......                              .....+
T Consensus       270 ~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~------------------------------~~~~~~  318 (359)
T 3vhe_A          270 RV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG------------------------------TRMRAP  318 (359)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT------------------------------CCCCCC
T ss_pred             CC-CCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcC------------------------------CCCCCC
Confidence            76 8999999999999999998 999998876554443332211                              011234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...++.+.+||.+||..||.+|||+.++++|
T Consensus       319 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          319 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            5678899999999999999999999999986

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=2e-30  Score=237.66  Aligned_cols=160  Identities=16%  Similarity=0.180  Sum_probs=129.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++...............+|+.|+|||++
T Consensus       107 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  186 (281)
T 3cc6_A          107 KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI  186 (281)
T ss_dssp             TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhh
Confidence            34578888999999999999999999999999999999999999999999999987543322233445678899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||......+....+.....                               ..
T Consensus       187 ~~~~-~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~  234 (281)
T 3cc6_A          187 NFRR-FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR-------------------------------LP  234 (281)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC-------------------------------CC
T ss_pred             ccCC-CCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC-------------------------------CC
Confidence            8765 8999999999999999998 9999988776666555433111                               12


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...++.+.+||.+||..||.+|||+.+++++
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            334578899999999999999999999999874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.96  E-value=1.5e-30  Score=238.68  Aligned_cols=159  Identities=14%  Similarity=0.206  Sum_probs=133.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||+++..............+|+.|+|||++.
T Consensus       115 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (283)
T 3gen_A          115 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM  194 (283)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhc
Confidence            45888889999999999999999999999999999999999999999999999875432222233445678899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |..||.+.+.......+.....                               ...
T Consensus       195 ~~~-~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~~~  242 (283)
T 3gen_A          195 YSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-------------------------------LYR  242 (283)
T ss_dssp             HCC-CSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-------------------------------CCC
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccC-------------------------------CCC
Confidence            876 8999999999999999998 9999998887776666643221                               112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...++.+.+||.+||..||.+|||+.++++|
T Consensus       243 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          243 PHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            34567889999999999999999999999976

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.9e-30  Score=243.42  Aligned_cols=159  Identities=16%  Similarity=0.136  Sum_probs=125.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....... .......+|+.|+|||+
T Consensus       111 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~  190 (327)
T 3lzb_A          111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES  190 (327)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHH
Confidence            34578888899999999999999999999999999999999999999999999987543221 22334466889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|+|++ |.+||.+.+.......+....                               ..
T Consensus       191 ~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~  238 (327)
T 3lzb_A          191 ILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-------------------------------RL  238 (327)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-------------------------------CC
T ss_pred             HcCCC-CChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            99876 8999999999999999999 999999887766555543211                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...+..+.+||.+||..||.+|||+.+++.
T Consensus       239 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          239 PQPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            234557888999999999999999999999987

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=1.1e-30  Score=244.90  Aligned_cols=167  Identities=20%  Similarity=0.232  Sum_probs=113.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCcccc-CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTID-GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||+++.....  ......+||+.|+|||+
T Consensus       119 ~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~  196 (327)
T 3aln_A          119 DDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS--IAKTRDAGCRPYMAPER  196 (327)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----------------------
T ss_pred             cccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc--cccccCCCCccccCcee
Confidence            35577788889999999999999999 9999999999999999999999999999865432  22344579999999999


Q ss_pred             hh----cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH-hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         157 LM----GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV-QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       157 l~----~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      +.    +. .++.++|||||||++|+|++|..||.+.... +.+..+.  .+.++                         
T Consensus       197 ~~~~~~~~-~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~-------------------------  248 (327)
T 3aln_A          197 IDPSASRQ-GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV--KGDPP-------------------------  248 (327)
T ss_dssp             ----------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC--CSCCC-------------------------
T ss_pred             eccccCcC-CCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh--cCCCC-------------------------
Confidence            83    43 3899999999999999999999999865421 1111110  00000                         


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..........++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       249 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             CCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence            0001123467889999999999999999999999999999965

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.96  E-value=3.8e-30  Score=246.53  Aligned_cols=158  Identities=20%  Similarity=0.191  Sum_probs=133.1

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...... ........+|+.|+|||++.
T Consensus       187 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  266 (382)
T 3tt0_A          187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  266 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhc
Confidence            47888889999999999999999999999999999999999999999999998654322 12344456788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.+..+.+..+....                               ....
T Consensus       267 ~~~-~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  314 (382)
T 3tt0_A          267 DRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-------------------------------RMDK  314 (382)
T ss_dssp             SCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-------------------------------CCCC
T ss_pred             CCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCC
Confidence            875 8999999999999999998 999999887766655553211                               1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...++.+.+||.+||..||.+|||+.+++++
T Consensus       315 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          315 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            45678899999999999999999999999985

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=8.8e-31  Score=241.58  Aligned_cols=163  Identities=13%  Similarity=0.062  Sum_probs=129.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee---cCCCCeEEeeCCcccccCCCCC------CCccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY---QATYSSKICDFGLARVEEPDPN------KAMTQEVVT  148 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~---~~~~~vKl~DFGla~~~~~~~~------~~~~~~~~t  148 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+.......      .......||
T Consensus        99 ~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt  178 (296)
T 4hgt_A           99 SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT  178 (296)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCC
Confidence            3458888999999999999999999999999999999999   7889999999999987543221      123356899


Q ss_pred             ccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChH---hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcc
Q psy2865         149 QYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPV---QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQT  225 (395)
Q Consensus       149 ~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~---~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  225 (395)
                      +.|+|||++.+.. ++.++||||+||++|+|++|..||.+.+..   ..+..+....-..                    
T Consensus       179 ~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------------------  237 (296)
T 4hgt_A          179 ARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST--------------------  237 (296)
T ss_dssp             GGGCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS--------------------
T ss_pred             ccccchHHhcCCC-CCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc--------------------
Confidence            9999999998876 899999999999999999999999875432   2222222110000                    


Q ss_pred             ccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         226 RKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                             .........++.+.+||.+||..||.+|||+.++++
T Consensus       238 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          238 -------PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -------CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -------hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                   011233567889999999999999999999999886

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=2.2e-30  Score=246.52  Aligned_cols=168  Identities=12%  Similarity=0.018  Sum_probs=128.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec--CCCCeEEeeCCcccccCCCCC------CCcccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ--ATYSSKICDFGLARVEEPDPN------KAMTQEVVTQ  149 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~--~~~~vKl~DFGla~~~~~~~~------~~~~~~~~t~  149 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++  .++.+||+|||+|+.......      ......+||+
T Consensus       146 ~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~  225 (364)
T 3op5_A          146 AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTI  225 (364)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCC
Confidence            35689999999999999999999999999999999999999  889999999999986543211      1123456999


Q ss_pred             cccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHh-cCCCCHHHHHhhhhhhhhhhhhccccC
Q psy2865         150 YYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDL-LGTPTPEEMRHACDGAKCHMLRQTRKS  228 (395)
Q Consensus       150 ~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (395)
                      .|+|||++.+.. ++.++|||||||++|+|++|..||.+......+...... ........                   
T Consensus       226 ~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-------------------  285 (364)
T 3op5_A          226 EFTSIDAHNGVA-PSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASL-------------------  285 (364)
T ss_dssp             TTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHH-------------------
T ss_pred             CccCHHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHH-------------------
Confidence            999999998876 899999999999999999999999865433322222110 00000000                   


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                         ....-.....+..+.+||..||..||.+|||+.++++
T Consensus       286 ---~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          286 ---MDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             ---HHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ---HHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence               0000112567889999999999999999999999876

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=3.6e-30  Score=237.60  Aligned_cols=162  Identities=14%  Similarity=0.057  Sum_probs=129.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee---cCCCCeEEeeCCcccccCCCCC------CCcccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY---QATYSSKICDFGLARVEEPDPN------KAMTQEVVTQ  149 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~---~~~~~vKl~DFGla~~~~~~~~------~~~~~~~~t~  149 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+.......      ......+||+
T Consensus       100 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~  179 (296)
T 3uzp_A          100 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA  179 (296)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccccccccccccccc
Confidence            458888999999999999999999999999999999999   4889999999999987543221      1234568999


Q ss_pred             cccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh---HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc
Q psy2865         150 YYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP---VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR  226 (395)
Q Consensus       150 ~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~---~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  226 (395)
                      .|+|||++.+.. ++.++|||||||++|+|++|..||.+.+.   ...+..+....-..                     
T Consensus       180 ~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------  237 (296)
T 3uzp_A          180 RYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST---------------------  237 (296)
T ss_dssp             TTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS---------------------
T ss_pred             ccCChhhhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC---------------------
Confidence            999999998876 89999999999999999999999987432   22333332210000                     


Q ss_pred             cCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         227 KSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                            .........++.+.+||.+||..||.+|||+.++++
T Consensus       238 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          238 ------PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ------CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ------chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                  011233567889999999999999999999999876

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=9.6e-31  Score=244.83  Aligned_cols=181  Identities=19%  Similarity=0.179  Sum_probs=132.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc----------CccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID----------GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~----------~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~  147 (395)
                      ..+++..+..++.||+.||.|||+.          ||+||||||+|||++.++.+||+|||+|+....... ......+|
T Consensus       116 ~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~g  195 (322)
T 3soc_A          116 NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG  195 (322)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCcc
Confidence            3588888999999999999999999          999999999999999999999999999987543221 23344689


Q ss_pred             cccccchhhhhcC----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhh
Q psy2865         148 TQYYRAPEILMGA----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR  223 (395)
Q Consensus       148 t~~y~aPEvl~~~----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  223 (395)
                      |+.|+|||++.+.    ..++.++|||||||++|+|++|.+||.+......+.......+.+....+.......      
T Consensus       196 t~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  269 (322)
T 3soc_A          196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHK------  269 (322)
T ss_dssp             CGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS------
T ss_pred             CccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcc------
Confidence            9999999999873    225678899999999999999999998876544443333444444444332211000      


Q ss_pred             ccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                        .....+... ......+..+.+||.+||..||.+|||+.++++
T Consensus       270 --~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          270 --KKRPVLRDY-WQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             --CCCCCCCGG-GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --cCCCCcccc-ccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence              000000000 001123456899999999999999999999986

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=4e-30  Score=236.82  Aligned_cols=164  Identities=17%  Similarity=0.159  Sum_probs=121.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-CCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-PNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||+++..... .........||+.|+|||++
T Consensus       115 ~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  194 (289)
T 3og7_A          115 TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI  194 (289)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhh
Confidence            45778888899999999999999999999999999999999999999999999864321 12234456799999999998


Q ss_pred             hc--CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MG--ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~--~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ..  ...++.++|||||||++|+|++|..||.+....+.+..+......++                          ...
T Consensus       195 ~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~  248 (289)
T 3og7_A          195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP--------------------------DLS  248 (289)
T ss_dssp             C----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC--------------------------CTT
T ss_pred             cccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc--------------------------chh
Confidence            62  22378899999999999999999999988766655554433211110                          112


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ......++.+.+||.+||..||.+|||+.++++
T Consensus       249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            334567889999999999999999999999986

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=5.1e-30  Score=242.23  Aligned_cols=163  Identities=13%  Similarity=0.067  Sum_probs=127.4

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC--CeEEeeCCcccccCCCC------CCCcccccccccc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY--SSKICDFGLARVEEPDP------NKAMTQEVVTQYY  151 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~--~vKl~DFGla~~~~~~~------~~~~~~~~~t~~y  151 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++  .+||+|||+|+......      .......+||+.|
T Consensus       147 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y  226 (345)
T 2v62_A          147 TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEF  226 (345)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccc
Confidence            688889999999999999999999999999999999999877  99999999998653221      1122456899999


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC--ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ--SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~--~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      +|||++.+.. ++.++|||||||++|+|++|..||.+.  +...............+..                     
T Consensus       227 ~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------  284 (345)
T 2v62_A          227 TSLDAHKGVA-LSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQS---------------------  284 (345)
T ss_dssp             CCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHH---------------------
T ss_pred             cCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHH---------------------
Confidence            9999998875 899999999999999999999999653  2222222222211111111                     


Q ss_pred             ccchhhcc--CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         230 SLSSLYSL--SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       230 ~~~~~~~~--~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                          ....  ....+..+.+||..||..||.+|||+.++++
T Consensus       285 ----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          285 ----VLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             ----HHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----HHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                0111  1267889999999999999999999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.96  E-value=5.5e-30  Score=240.46  Aligned_cols=162  Identities=14%  Similarity=0.055  Sum_probs=127.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC-----eEEeeCCcccccCCCCCC------Cccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS-----SKICDFGLARVEEPDPNK------AMTQEV  146 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~-----vKl~DFGla~~~~~~~~~------~~~~~~  146 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.     +||+|||+|+........      .....+
T Consensus        99 ~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~  178 (330)
T 2izr_A           99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT  178 (330)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcC
Confidence            357889999999999999999999999999999999999998877     999999999875432211      134568


Q ss_pred             ccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh---HHHHHHHhcCCCCHHHHHhhhhhhhhhhhh
Q psy2865         147 VTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ---QLGLITDLLGTPTPEEMRHACDGAKCHMLR  223 (395)
Q Consensus       147 ~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~---~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  223 (395)
                      ||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+...   .+..+.......+.                
T Consensus       179 gt~~y~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~----------------  241 (330)
T 2izr_A          179 GTARYMSINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI----------------  241 (330)
T ss_dssp             SCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH----------------
T ss_pred             CCccccChHHHcCCC-CCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH----------------
Confidence            999999999999876 8999999999999999999999998854333   23333221000000                


Q ss_pred             ccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                                 ....... +.+.+||..||..||.+|||+.++++
T Consensus       242 -----------~~~~~~~-p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          242 -----------EVLCENF-PEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             -----------HHHTTTC-HHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -----------HHHhccC-hHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                       0111223 38999999999999999999998876

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=4.3e-30  Score=240.76  Aligned_cols=158  Identities=20%  Similarity=0.251  Sum_probs=130.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........  ......+|..|+|||+
T Consensus       146 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~  225 (325)
T 3kul_A          146 GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA  225 (325)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhH
Confidence            46888889999999999999999999999999999999999999999999999876432211  2233456778999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|+|++ |..||.+.+..+.+..+.....                               .
T Consensus       226 ~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------~  273 (325)
T 3kul_A          226 IAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR-------------------------------L  273 (325)
T ss_dssp             HHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCC-------------------------------C
T ss_pred             hcCCC-CCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCC-------------------------------C
Confidence            98776 8999999999999999998 9999998887776666543211                               1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+||.+||..||.+|||+.++++
T Consensus       274 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            234567889999999999999999999999986

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=5.7e-30  Score=250.74  Aligned_cols=158  Identities=20%  Similarity=0.239  Sum_probs=130.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..++...+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..............+|..|+|||++.
T Consensus       279 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  358 (454)
T 1qcf_A          279 SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN  358 (454)
T ss_dssp             HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhc
Confidence            45677778889999999999999999999999999999999999999999999875432111223345678899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. |+.++|||||||++|||++ |..||.+.+..+.+..+.....                               ...
T Consensus       359 ~~~-~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-------------------------------~~~  406 (454)
T 1qcf_A          359 FGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-------------------------------MPR  406 (454)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC-------------------------------CCC
T ss_pred             cCC-CCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------------------------------CCC
Confidence            765 8999999999999999999 9999999887776666543211                               122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +..+++.+.+||.+||..||.+|||+.+++.
T Consensus       407 ~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          407 PENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            3567889999999999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=7.5e-30  Score=232.47  Aligned_cols=157  Identities=20%  Similarity=0.174  Sum_probs=123.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccC---ccccCCCCCceeecC--------CCCeEEeeCCcccccCCCCCCCcccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDG---YQARQPTRQLVMYQA--------TYSSKICDFGLARVEEPDPNKAMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDlkp~Nil~~~--------~~~vKl~DFGla~~~~~~~~~~~~~~~~  147 (395)
                      ..+++..+..++.|++.||.|||+.|   |+||||||+|||++.        ++.++|+|||++......   ......|
T Consensus       100 ~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~  176 (271)
T 3dtc_A          100 KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT---TKMSAAG  176 (271)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------C
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc---cccCCCC
Confidence            46788888999999999999999999   899999999999985        778999999999865422   2334578


Q ss_pred             cccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcccc
Q psy2865         148 TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK  227 (395)
Q Consensus       148 t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  227 (395)
                      |+.|+|||++.+.. ++.++||||+||++|+|++|..||.+.+.......+....                         
T Consensus       177 ~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------------------------  230 (271)
T 3dtc_A          177 AYAWMAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK-------------------------  230 (271)
T ss_dssp             CGGGSCHHHHHHCC-CSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC-------------------------
T ss_pred             ccceeCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC-------------------------
Confidence            99999999998876 8999999999999999999999999877665544432210                         


Q ss_pred             CCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         228 SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                           .....+...++.+.+||.+||..||.+|||+.++++|
T Consensus       231 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          231 -----LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                 0112345678899999999999999999999999874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.96  E-value=6.1e-30  Score=238.07  Aligned_cols=159  Identities=18%  Similarity=0.170  Sum_probs=131.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++
T Consensus       145 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  224 (314)
T 2ivs_A          145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL  224 (314)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH
T ss_pred             cCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhh
Confidence            4578888899999999999999999999999999999999999999999999986543211 123344678899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+.+.......+....                               ...
T Consensus       225 ~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  272 (314)
T 2ivs_A          225 FDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-------------------------------RME  272 (314)
T ss_dssp             HHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------------------------CCC
T ss_pred             cCCC-cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC-------------------------------cCC
Confidence            8875 8999999999999999999 999999887766555443211                               112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...++.+.+||.+||..||.+|||+.+++++
T Consensus       273 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          273 RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            345678899999999999999999999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.96  E-value=6.5e-30  Score=242.16  Aligned_cols=167  Identities=9%  Similarity=0.021  Sum_probs=129.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC--CeEEeeCCcccccCCCCC------CCcccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY--SSKICDFGLARVEEPDPN------KAMTQEVVTQ  149 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~--~vKl~DFGla~~~~~~~~------~~~~~~~~t~  149 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++  .+||+|||+|+.......      ......+||+
T Consensus       153 ~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~  232 (352)
T 2jii_A          153 KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDL  232 (352)
T ss_dssp             GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCc
Confidence            36789999999999999999999999999999999999999988  899999999986543211      1224458999


Q ss_pred             cccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCC-hHhHHHHH-HHhcCCCCHHHHHhhhhhhhhhhhhcccc
Q psy2865         150 YYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS-PVQQLGLI-TDLLGTPTPEEMRHACDGAKCHMLRQTRK  227 (395)
Q Consensus       150 ~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~-~~~~l~~i-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  227 (395)
                      .|+|||++.+.. ++.++|||||||++|+|++|..||.+.. ....+..+ ......+.                     
T Consensus       233 ~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------  290 (352)
T 2jii_A          233 EFISMDLHKGCG-PSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPG---------------------  290 (352)
T ss_dssp             TTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCC---------------------
T ss_pred             cccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChh---------------------
Confidence            999999998875 8999999999999999999999998764 22222222 11111100                     


Q ss_pred             CCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         228 SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                        .+..........+..+.+||.+||..||.+|||+.++++
T Consensus       291 --~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          291 --PFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             --CEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             --hhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence              000111122356889999999999999999999999976

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=7.8e-30  Score=234.58  Aligned_cols=161  Identities=17%  Similarity=0.163  Sum_probs=133.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||+++.......  .......+|+.|+|||+
T Consensus       105 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  184 (287)
T 1u59_A          105 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC  184 (287)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHH
Confidence            4578888899999999999999999999999999999999999999999999987643221  11233456889999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|+|++ |..||.+.+..+.+..+....                               ..
T Consensus       185 ~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~-------------------------------~~  232 (287)
T 1u59_A          185 INFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-------------------------------RM  232 (287)
T ss_dssp             HHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC-------------------------------CC
T ss_pred             hccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCC-------------------------------cC
Confidence            98765 8999999999999999998 999999887666555543210                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      ..+...++.+.+||.+||..||.+|||+.++++|.+
T Consensus       233 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          233 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            344677899999999999999999999999998755

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=6.4e-30  Score=238.14  Aligned_cols=158  Identities=17%  Similarity=0.200  Sum_probs=129.3

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~~  159 (395)
                      +++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+
T Consensus       145 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  224 (316)
T 2xir_A          145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  224 (316)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcc
Confidence            78888899999999999999999999999999999999999999999999986543222 12334567889999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |..||.+......+.......                              .....+
T Consensus       225 ~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~------------------------------~~~~~~  273 (316)
T 2xir_A          225 RV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG------------------------------TRMRAP  273 (316)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT------------------------------CCCCCC
T ss_pred             cc-ccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccC------------------------------ccCCCC
Confidence            76 8999999999999999998 999998876444333322110                              011234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...++.+.+||.+||..||.+|||+.++++|
T Consensus       274 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5578899999999999999999999999986

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5e-30  Score=241.95  Aligned_cols=162  Identities=20%  Similarity=0.151  Sum_probs=130.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......... ......+|+.|+|||++
T Consensus       167 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  246 (344)
T 1rjb_A          167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL  246 (344)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh
Confidence            45788888899999999999999999999999999999999999999999999865432211 22345678899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+......+..+....                              ....
T Consensus       247 ~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~------------------------------~~~~  295 (344)
T 1rjb_A          247 FEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG------------------------------FKMD  295 (344)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTT------------------------------CCCC
T ss_pred             ccCC-CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcC------------------------------CCCC
Confidence            8876 8999999999999999998 999998876554444433210                              0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      .+...++.+.+||.+||..||.+|||+.++++|..
T Consensus       296 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          296 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            34557889999999999999999999999998654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.96  E-value=1e-29  Score=233.69  Aligned_cols=158  Identities=18%  Similarity=0.212  Sum_probs=132.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...............+|+.|+|||++.
T Consensus       106 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  185 (288)
T 3kfa_A          106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA  185 (288)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHH
T ss_pred             CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhc
Confidence            44788888899999999999999999999999999999999999999999999876543333334456788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |.+||.+.+.......+....                               ....
T Consensus       186 ~~~-~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  233 (288)
T 3kfa_A          186 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-------------------------------RMER  233 (288)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------------------------CCCC
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccC-------------------------------CCCC
Confidence            876 8999999999999999999 999999887666555543211                               1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...++.+.+||.+||..||.+|||+.++++
T Consensus       234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            4567889999999999999999999999976

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=6.6e-30  Score=232.25  Aligned_cols=159  Identities=16%  Similarity=0.181  Sum_probs=131.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++...............+|..|+|||++.
T Consensus        99 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  178 (267)
T 3t9t_A           99 GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS  178 (267)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhc
Confidence            45788888999999999999999999999999999999999999999999999865432112233456788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++||||+||++|+|++ |.+||.+.+....+..+.....                               ...
T Consensus       179 ~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~-------------------------------~~~  226 (267)
T 3t9t_A          179 FSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------------------------------LYK  226 (267)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-------------------------------CCC
T ss_pred             CCC-ccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc-------------------------------CCC
Confidence            765 8999999999999999999 8999998877666655533110                               112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+||.+||..||.+|||+.+++++
T Consensus       227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            34567889999999999999999999999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.95  E-value=1.7e-29  Score=231.20  Aligned_cols=158  Identities=20%  Similarity=0.218  Sum_probs=131.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++...............+|..|+|||++.
T Consensus       104 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  183 (279)
T 1qpc_A          104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN  183 (279)
T ss_dssp             HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhc
Confidence            46888889999999999999999999999999999999999999999999999876433222233446688999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.+..+.+..+....                               ....
T Consensus       184 ~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  231 (279)
T 1qpc_A          184 YGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------------------------------RMVR  231 (279)
T ss_dssp             HCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-------------------------------CCCC
T ss_pred             cCC-CCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhccc-------------------------------CCCC
Confidence            765 8999999999999999999 999999887766655543211                               0122


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...+..+.+||.+||..||.+|||+.++++
T Consensus       232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            3567889999999999999999999999876

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=7.7e-30  Score=240.42  Aligned_cols=159  Identities=18%  Similarity=0.190  Sum_probs=131.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++
T Consensus       169 ~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  248 (343)
T 1luf_A          169 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI  248 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh
Confidence            5678888899999999999999999999999999999999999999999999986532211 223345778999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+.+..+.+..+...                               ....
T Consensus       249 ~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-------------------------------~~~~  296 (343)
T 1luf_A          249 FYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDG-------------------------------NILA  296 (343)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-------------------------------CCCC
T ss_pred             ccCC-cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCC-------------------------------CcCC
Confidence            8876 8999999999999999998 99999988776665555321                               0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.+||.+||..||.+|||+.+++++
T Consensus       297 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          297 CPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            345678899999999999999999999999863

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.95  E-value=1.2e-29  Score=235.94  Aligned_cols=160  Identities=18%  Similarity=0.163  Sum_probs=130.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++........ ......+|+.|+|||++
T Consensus       140 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  219 (313)
T 1t46_A          140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI  219 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHh
Confidence            35788889999999999999999999999999999999999999999999999876443221 22344678899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+......+..+.....                              ...
T Consensus       220 ~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~  268 (313)
T 1t46_A          220 FNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF------------------------------RML  268 (313)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTC------------------------------CCC
T ss_pred             cCCC-CChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCC------------------------------CCC
Confidence            8876 8999999999999999998 9999988765544443332100                              011


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.+||.+||..||.+|||+.+++++
T Consensus       269 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          269 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            234578899999999999999999999999874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=8.2e-30  Score=250.50  Aligned_cols=163  Identities=13%  Similarity=0.081  Sum_probs=129.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceee---cCCCCeEEeeCCcccccCCCCC------CCccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY---QATYSSKICDFGLARVEEPDPN------KAMTQEVVT  148 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~---~~~~~vKl~DFGla~~~~~~~~------~~~~~~~~t  148 (395)
                      ...+++..+..++.||+.||.|||..|||||||||+||||   +.++.+||+|||+|+.......      ......+||
T Consensus        97 ~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt  176 (483)
T 3sv0_A           97 SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT  176 (483)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCC
Confidence            3468899999999999999999999999999999999999   6889999999999987543221      112356899


Q ss_pred             ccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhH---HHHHHHhcCCCCHHHHHhhhhhhhhhhhhcc
Q psy2865         149 QYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQ---LGLITDLLGTPTPEEMRHACDGAKCHMLRQT  225 (395)
Q Consensus       149 ~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~---l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  225 (395)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||.+......   +..+....-                      
T Consensus       177 ~~Y~aPE~~~~~~-~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~----------------------  233 (483)
T 3sv0_A          177 ARYASVNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV----------------------  233 (483)
T ss_dssp             TTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH----------------------
T ss_pred             ccccCHHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc----------------------
Confidence            9999999999876 89999999999999999999999988654332   222221100                      


Q ss_pred             ccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         226 RKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                           ......+....+..+.+||..||..||.+||++.++++
T Consensus       234 -----~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          234 -----ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             -----HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -----cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                 00111233567889999999999999999999997654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=1.8e-29  Score=247.03  Aligned_cols=159  Identities=19%  Similarity=0.225  Sum_probs=127.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..............+|..|+|||++
T Consensus       274 ~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~  353 (452)
T 1fmk_A          274 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA  353 (452)
T ss_dssp             HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHH
Confidence            34578888899999999999999999999999999999999999999999999987543222223344567889999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|||++ |..||.+.+..+.+..+.....                               ..
T Consensus       354 ~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-------------------------------~~  401 (452)
T 1fmk_A          354 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-------------------------------MP  401 (452)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-------------------------------CC
T ss_pred             hcCC-CCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------------------------------CC
Confidence            8775 8999999999999999999 9999999887776665543111                               12


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+||.+||..||.+|||+++++.
T Consensus       402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            34567889999999999999999999999886

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.95  E-value=1.3e-29  Score=242.46  Aligned_cols=159  Identities=19%  Similarity=0.192  Sum_probs=129.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC-cccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA-MTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~-~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+......... .....+|..|+|||+
T Consensus       207 ~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~  286 (377)
T 3cbl_A          207 GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEA  286 (377)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhH
Confidence            4468888899999999999999999999999999999999999999999999998643221111 112235678999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||++ |..||.+.+.......+....                               ..
T Consensus       287 ~~~~~-~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~  334 (377)
T 3cbl_A          287 LNYGR-YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG-------------------------------RL  334 (377)
T ss_dssp             HHHCE-EEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC-------------------------------CC
T ss_pred             hccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            98765 8999999999999999998 999999887665554443211                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+||.+||..||.+|||+.++++
T Consensus       335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            234557889999999999999999999999975

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.95  E-value=2e-29  Score=234.69  Aligned_cols=159  Identities=13%  Similarity=0.121  Sum_probs=126.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++
T Consensus       142 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  221 (313)
T 3brb_A          142 KHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL  221 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhh
Confidence            4578888899999999999999999999999999999999999999999999986543211 122334568899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |.+||.+.+.......+....                               ...
T Consensus       222 ~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  269 (313)
T 3brb_A          222 ADRV-YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH-------------------------------RLK  269 (313)
T ss_dssp             HSSC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------------------------CCC
T ss_pred             cCCC-ccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC-------------------------------CCC
Confidence            8875 8999999999999999999 999999887766655553211                               112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...++.+.+||.+||..||.+|||+.+++.+
T Consensus       270 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          270 QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            345678899999999999999999999999874

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=2.3e-29  Score=231.26  Aligned_cols=156  Identities=16%  Similarity=0.152  Sum_probs=125.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeecCCCC-----eEEeeCCcccccCCCCCCCcccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQATYS-----SKICDFGLARVEEPDPNKAMTQEVVTQYY  151 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~~~~~-----vKl~DFGla~~~~~~~~~~~~~~~~t~~y  151 (395)
                      ..+++..+..++.|++.||.|||+.|  |+||||||+|||++.++.     +||+|||+|+...    ......+||+.|
T Consensus       117 ~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~----~~~~~~~g~~~y  192 (287)
T 4f0f_A          117 HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV----HSVSGLLGNFQW  192 (287)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCS----SCEECCCCCCTT
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccc----ccccccCCCccc
Confidence            45788888899999999999999999  999999999999987776     9999999998532    234556899999


Q ss_pred             cchhhhhc-CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhH--HHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC
Q psy2865         152 RAPEILMG-ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQ--LGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS  228 (395)
Q Consensus       152 ~aPEvl~~-~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~--l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (395)
                      +|||++.+ ...++.++||||+||++|+|++|..||.+.+....  ...+.. .+                         
T Consensus       193 ~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~-------------------------  246 (287)
T 4f0f_A          193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-EG-------------------------  246 (287)
T ss_dssp             SCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH-SC-------------------------
T ss_pred             cCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc-cC-------------------------
Confidence            99999843 22378899999999999999999999987654332  222211 11                         


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                          .....+...++.+.+||.+||..||.+|||+.++++
T Consensus       247 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          247 ----LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             ----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                011244567889999999999999999999999986

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=1.7e-29  Score=235.97  Aligned_cols=158  Identities=18%  Similarity=0.235  Sum_probs=130.3

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++....... ......++|+.|+|||++.
T Consensus       134 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (322)
T 1p4o_A          134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK  213 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhc
Confidence            346777888999999999999999999999999999999999999999999986432111 1223346788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |..||.+.+.......+...                               .....
T Consensus       214 ~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-------------------------------~~~~~  261 (322)
T 1p4o_A          214 DGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-------------------------------GLLDK  261 (322)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-------------------------------CCCCC
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcC-------------------------------CcCCC
Confidence            876 8999999999999999998 89999988776665555321                               01123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...+..+.+||.+||..||.+|||+.++++|
T Consensus       262 ~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          262 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            45678899999999999999999999999986

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=3.8e-29  Score=230.91  Aligned_cols=159  Identities=16%  Similarity=0.195  Sum_probs=128.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC---CCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP---NKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~---~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+|+......   ........+|..|+||
T Consensus       118 ~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aP  197 (298)
T 3pls_A          118 QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL  197 (298)
T ss_dssp             TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccCh
Confidence            3557777888999999999999999999999999999999999999999999998653321   1223445778999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      |++.+.. ++.++|||||||++|+|++ |.++|.+.+..+....+.....                              
T Consensus       198 E~~~~~~-~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~------------------------------  246 (298)
T 3pls_A          198 ESLQTYR-FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR------------------------------  246 (298)
T ss_dssp             HHHTTCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC------------------------------
T ss_pred             hhhccCC-CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC------------------------------
Confidence            9998876 8999999999999999999 5666766666555555433211                              


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                       ...+...+..+.+||.+||..||.+|||+.++++
T Consensus       247 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          247 -LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence             1233557789999999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.95  E-value=1.7e-29  Score=232.40  Aligned_cols=160  Identities=16%  Similarity=0.136  Sum_probs=130.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++.........  ......+|..|+|||
T Consensus       115 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (291)
T 1u46_A          115 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE  194 (291)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHH
T ss_pred             cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCch
Confidence            356888899999999999999999999999999999999999999999999999876432211  123346788899999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. ++.++|||||||++|+|++ |..||.+.+....+..+.....                              .
T Consensus       195 ~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~  243 (291)
T 1u46_A          195 SLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE------------------------------R  243 (291)
T ss_dssp             HHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCC------------------------------C
T ss_pred             hhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCC------------------------------C
Confidence            998875 8999999999999999999 9999998887666655532110                              1


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+...+..+.+||.+||..||.+|||+.++++
T Consensus       244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          244 LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            1233567889999999999999999999999987

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=3.9e-30  Score=240.86  Aligned_cols=175  Identities=15%  Similarity=0.119  Sum_probs=128.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCcccc---CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTID---GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      .+++..+..++.||+.||.|||+.   ||+||||||+|||++.++.+||+|||+|+.............+||+.|+|||+
T Consensus       127 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~  206 (326)
T 3uim_A          127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY  206 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHH
Confidence            367777889999999999999999   99999999999999999999999999998765433344555679999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC-----ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ-----SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~-----~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      +.+.. ++.++||||+||++|+|++|..||...     ........+...+.....                  ......
T Consensus       207 ~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~  267 (326)
T 3uim_A          207 LSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL------------------EALVDV  267 (326)
T ss_dssp             HHHSE-ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCS------------------TTSSCT
T ss_pred             hccCC-CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhh------------------hhhcCh
Confidence            98876 899999999999999999999999621     111111111111000000                  000000


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      ..........+..+.+|+.+||..||.+|||+.++++|-.-.
T Consensus       268 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          268 DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            000112223346789999999999999999999999986543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.95  E-value=9.6e-30  Score=238.45  Aligned_cols=156  Identities=19%  Similarity=0.203  Sum_probs=127.7

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....  ........+|+.|+|||++.+
T Consensus       138 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~  215 (327)
T 1fvr_A          138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNY  215 (327)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCE--ECCC----CCTTTCCHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccc--cccccCCCCCccccChhhhcc
Confidence            578888899999999999999999999999999999999999999999999975332  112233466889999999987


Q ss_pred             CCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. ++.++|||||||++|+|++ |..||.+.+....+..+....                               ....+
T Consensus       216 ~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~-------------------------------~~~~~  263 (327)
T 1fvr_A          216 SV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-------------------------------RLEKP  263 (327)
T ss_dssp             CE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC-------------------------------CCCCC
T ss_pred             cc-CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCC-------------------------------CCCCC
Confidence            65 8999999999999999998 999999887665544432210                               11233


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...++.+.+||.+||..||.+|||+.++++|
T Consensus       264 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          264 LNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            4678899999999999999999999999986

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.95  E-value=2.9e-29  Score=231.26  Aligned_cols=158  Identities=17%  Similarity=0.197  Sum_probs=129.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.........  ......+|+.|+|||+
T Consensus       112 ~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  191 (291)
T 1xbb_A          112 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC  191 (291)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHH
Confidence            45888889999999999999999999999999999999999999999999999876432211  1223356788999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|+|++ |..||.+.+.......+....                               ..
T Consensus       192 ~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~  239 (291)
T 1xbb_A          192 INYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE-------------------------------RM  239 (291)
T ss_dssp             HHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-------------------------------CC
T ss_pred             hccCC-CChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            98876 8999999999999999999 999999887766555443210                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+||.+||..||.+|||+.++++
T Consensus       240 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          240 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            234567889999999999999999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.95  E-value=1.3e-29  Score=233.16  Aligned_cols=153  Identities=14%  Similarity=0.132  Sum_probs=123.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC--------eEEeeCCcccccCCCCCCCccccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS--------SKICDFGLARVEEPDPNKAMTQEVVTQY  150 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~--------vKl~DFGla~~~~~~~~~~~~~~~~t~~  150 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.        +||+|||++....     ......+|+.
T Consensus       108 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~-----~~~~~~~~~~  182 (289)
T 4fvq_A          108 NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL-----PKDILQERIP  182 (289)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTS-----CHHHHHHTTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCccccccc-----CccccCCcCc
Confidence            34888888999999999999999999999999999999998887        9999999997542     1234568899


Q ss_pred             ccchhhhhcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCC
Q psy2865         151 YRAPEILMGARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ  229 (395)
Q Consensus       151 y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (395)
                      |+|||++.+...++.++|||||||++|+|++| .++|.+.+.......+..                             
T Consensus       183 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~-----------------------------  233 (289)
T 4fvq_A          183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED-----------------------------  233 (289)
T ss_dssp             TSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-----------------------------
T ss_pred             ccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc-----------------------------
Confidence            99999998744589999999999999999995 555555554433332211                             


Q ss_pred             ccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       230 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                          ....+...+..+.+||.+||..||.+|||+.++++|
T Consensus       234 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          234 ----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             ----TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ----cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                112334456678999999999999999999999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.95  E-value=3.3e-29  Score=233.00  Aligned_cols=160  Identities=15%  Similarity=0.178  Sum_probs=118.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++..............++|+.|+|||++.
T Consensus       129 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  208 (309)
T 2h34_A          129 GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFS  208 (309)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHc
Confidence            46888889999999999999999999999999999999999999999999999875443333345568999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|||||||++|+|++|..||.+.+.......+.. ..                            ......+
T Consensus       209 ~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~----------------------------~~~~~~~  258 (309)
T 2h34_A          209 ESH-ATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQ-AI----------------------------PRPSTVR  258 (309)
T ss_dssp             C-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHS-CC----------------------------CCGGGTS
T ss_pred             CCC-CCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhcc-CC----------------------------CCccccC
Confidence            765 89999999999999999999999987654422222211 00                            0112345


Q ss_pred             CCCCHHHHHHHHHccccCCCCCc-CHHHHHc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRI-SVNSALC  268 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~-ta~e~L~  268 (395)
                      ...++.+.+||.+||..||.+|| |+++++.
T Consensus       259 ~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          259 PGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             CCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            67788999999999999999999 7887764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.95  E-value=1.1e-29  Score=237.48  Aligned_cols=176  Identities=16%  Similarity=0.131  Sum_probs=126.8

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-CCCCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-PNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++..... .........||+.|+|||++.
T Consensus       135 ~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  214 (321)
T 2qkw_B          135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFI  214 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhc
Confidence            3566677889999999999999999999999999999999999999999999864322 122234457899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|||||||++|+|++|..||.+....+....+....        .....    ..+.....   ........
T Consensus       215 ~~~-~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~--------~~~~~----~~~~~~~~---~~~~~~~~  278 (321)
T 2qkw_B          215 KGR-LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV--------ESHNN----GQLEQIVD---PNLADKIR  278 (321)
T ss_dssp             HCB-CCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH--------HHHTT----TCCCSSSS---SSCTTCSC
T ss_pred             CCC-CCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh--------hcccc----ccHHHhcC---hhhccccC
Confidence            876 8999999999999999999999998765432211110000        00000    00000000   00001122


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      +..+..+.+|+.+||..||.+|||+.++++|..
T Consensus       279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  311 (321)
T 2qkw_B          279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE  311 (321)
T ss_dssp             HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            334567899999999999999999999998644

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=1.3e-29  Score=234.41  Aligned_cols=166  Identities=17%  Similarity=0.207  Sum_probs=123.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcc--------ccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC---Ccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDST--------IDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK---AMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH--------~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~---~~~~~~~  147 (395)
                      ..+++..+..++.||+.||.|||        +.||+||||||+|||++.++.+||+|||+|+........   .....+|
T Consensus       100 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g  179 (301)
T 3q4u_A          100 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG  179 (301)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCC
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccccc
Confidence            35788888999999999999999        999999999999999999999999999999865432211   1234589


Q ss_pred             cccccchhhhhcCCC-----CCccchHHhHHHHHHHHHcC----------CCCCCCCCh----HhHHHHHHHhcCCCCHH
Q psy2865         148 TQYYRAPEILMGARH-----YSAAVDVWSVGCIFAELLGR----------RILFQAQSP----VQQLGLITDLLGTPTPE  208 (395)
Q Consensus       148 t~~y~aPEvl~~~~~-----~~~~~DiWSlG~il~ell~g----------~~~f~~~~~----~~~l~~i~~~~g~~~~~  208 (395)
                      |+.|+|||++.+...     ++.++|||||||++|+|++|          .+||.....    ...+..+....+..+  
T Consensus       180 t~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~--  257 (301)
T 3q4u_A          180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRP--  257 (301)
T ss_dssp             CGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC--
T ss_pred             ccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCC--
Confidence            999999999987531     45789999999999999999          788865422    122222211111000  


Q ss_pred             HHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         209 EMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                                          . + .........+..+.+||.+||..||.+|||+.++++
T Consensus       258 --------------------~-~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          258 --------------------N-I-PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             --------------------C-C-CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             --------------------C-C-ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                                0 0 000112234567999999999999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=1.8e-29  Score=236.66  Aligned_cols=163  Identities=15%  Similarity=0.181  Sum_probs=131.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCC-CCCcccccccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aP  154 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.   +..++|+|||+++...... ........+|+.|+||
T Consensus       135 ~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  214 (327)
T 2yfx_A          135 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP  214 (327)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCH
Confidence            34677778889999999999999999999999999999984   4569999999997543211 1223445778999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      |++.+.. ++.++|||||||++|+|++ |..||.+.+....+..+....                               
T Consensus       215 E~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-------------------------------  262 (327)
T 2yfx_A          215 EAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG-------------------------------  262 (327)
T ss_dssp             HHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-------------------------------
T ss_pred             hHhcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCC-------------------------------
Confidence            9998876 8999999999999999998 999999887766655553211                               


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      ....+...+..+.+||.+||..||.+|||+.++++|.|+-
T Consensus       263 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            1123356788999999999999999999999999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.95  E-value=2.5e-29  Score=248.68  Aligned_cols=158  Identities=18%  Similarity=0.211  Sum_probs=130.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..............+|..|+|||++.
T Consensus       313 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~  392 (495)
T 1opk_A          313 QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA  392 (495)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHh
Confidence            34677788889999999999999999999999999999999999999999999876433222233445678899999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. |+.++|||||||++|||++ |..||.+.+....+..+....                               ....
T Consensus       393 ~~~-~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  440 (495)
T 1opk_A          393 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-------------------------------RMER  440 (495)
T ss_dssp             HCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------------------------CCCC
T ss_pred             cCC-CCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCC
Confidence            776 8999999999999999998 999999887666555443211                               1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +..+++.+.+||.+||..||.+|||+.++++
T Consensus       441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            4567889999999999999999999999976

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.95  E-value=3.7e-29  Score=235.17  Aligned_cols=159  Identities=18%  Similarity=0.181  Sum_probs=131.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++
T Consensus       152 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  231 (334)
T 2pvf_A          152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL  231 (334)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHh
Confidence            4577778889999999999999999999999999999999999999999999986543211 123344678899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |..||.+.+..+.+..+....                               ...
T Consensus       232 ~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~  279 (334)
T 2pvf_A          232 FDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-------------------------------RMD  279 (334)
T ss_dssp             HHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC-------------------------------CCC
T ss_pred             cCCC-cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCC-------------------------------CCC
Confidence            8875 8999999999999999999 999999887766555543311                               112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...+..+.+||.+||..||.+|||+.+++++
T Consensus       280 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            345678899999999999999999999999874

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=4.5e-30  Score=241.40  Aligned_cols=187  Identities=19%  Similarity=0.193  Sum_probs=124.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCcccc---------CccccCCCCCceeecCCCCeEEeeCCcccccCCCC-------CCCcc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTID---------GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-------NKAMT  143 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~---------~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-------~~~~~  143 (395)
                      .+++..+..++.||+.||.|||+.         ||+||||||+|||++.++.+||+|||+|+......       .....
T Consensus       107 ~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~  186 (336)
T 3g2f_A          107 TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI  186 (336)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------C
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccc
Confidence            345666778999999999999999         99999999999999999999999999998654321       12233


Q ss_pred             cccccccccchhhhhcC------CCCCccchHHhHHHHHHHHHcCCCCC-CCCChHhHHHHH-HHhcCCCCHHHHHhhhh
Q psy2865         144 QEVVTQYYRAPEILMGA------RHYSAAVDVWSVGCIFAELLGRRILF-QAQSPVQQLGLI-TDLLGTPTPEEMRHACD  215 (395)
Q Consensus       144 ~~~~t~~y~aPEvl~~~------~~~~~~~DiWSlG~il~ell~g~~~f-~~~~~~~~l~~i-~~~~g~~~~~~~~~~~~  215 (395)
                      ..+||+.|+|||++.+.      ..++.++|||||||++|||++|..|| .+.+.......+ ....+.+....+.....
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVS  266 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHT
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhc
Confidence            56899999999999863      22677899999999999999995554 443322111111 11222232222211100


Q ss_pred             hhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHH------HcCCcccc
Q psy2865         216 GAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSA------LCHPYLDE  274 (395)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~------L~Hp~f~~  274 (395)
                      .        ......+..........++.+.+||.+||..||.+|||+.|+      +.++|-.+
T Consensus       267 ~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          267 R--------EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             T--------SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             c--------cccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            0        000000001111112244579999999999999999999999      45777765

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.95  E-value=5.5e-29  Score=227.75  Aligned_cols=154  Identities=14%  Similarity=0.160  Sum_probs=123.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.....    ......+|+.|+|||++.
T Consensus       112 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~----~~~~~~~~~~y~aPE~~~  187 (278)
T 1byg_A          112 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEALR  187 (278)
T ss_dssp             HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccc----cccCCCccccccCHHHhC
Confidence            3478888899999999999999999999999999999999999999999999986432    223346788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. ++.++|||||||++|+|++ |.+||.+.+..+....+....                               ....
T Consensus       188 ~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~  235 (278)
T 1byg_A          188 EKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-------------------------------KMDA  235 (278)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC-------------------------------CCCC
T ss_pred             CCC-CCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-------------------------------CCCC
Confidence            765 8999999999999999998 999998877665554442210                               1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...++.+.+||.+||..||.+|||+.++++
T Consensus       236 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          236 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            4567889999999999999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.4e-28  Score=228.62  Aligned_cols=153  Identities=22%  Similarity=0.228  Sum_probs=116.0

Q ss_pred             hcCCCCchhhHHhhcCCCCccc---cCccccCCCCCceeecCCCC-eEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          81 RSSRRKPFKLSEISATRPDSTI---DGYQARQPTRQLVMYQATYS-SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDlkp~Nil~~~~~~-vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ++...+..++.||+.||.|||+   .||+||||||+|||++.++. +||+|||+++...    .......||+.|+|||+
T Consensus        99 ~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~----~~~~~~~gt~~y~aPE~  174 (307)
T 2eva_A           99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNKGSAAWMAPEV  174 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------------CCTTSSCHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc----cccccCCCCCceEChhh
Confidence            4555667788999999999999   89999999999999998886 7999999998643    22344579999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh--HHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ--QLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~--~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      +.+.. ++.++|||||||++|+|++|..||.......  ....+..  +                             ..
T Consensus       175 ~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~-----------------------------~~  222 (307)
T 2eva_A          175 FEGSN-YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN--G-----------------------------TR  222 (307)
T ss_dssp             HTCCC-CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT--T-----------------------------CC
T ss_pred             hCCCC-CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc--C-----------------------------CC
Confidence            98875 8999999999999999999999997643221  1111110  0                             01


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+...+..+.+||.+||..||.+|||+.+++++
T Consensus       223 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          223 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            12345678899999999999999999999999873

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.9e-29  Score=239.44  Aligned_cols=159  Identities=14%  Similarity=0.121  Sum_probs=120.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......   ...+...+|+.|+|||
T Consensus       187 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE  266 (373)
T 3c1x_A          187 HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE  266 (373)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChH
Confidence            3467777888999999999999999999999999999999999999999999986532211   1223456788999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. ++.++|||||||++|+|++ |.+||.+.+..+....+....                               .
T Consensus       267 ~~~~~~-~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~-------------------------------~  314 (373)
T 3c1x_A          267 SLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-------------------------------R  314 (373)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC-------------------------------C
T ss_pred             HhcCCC-CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC-------------------------------C
Confidence            998876 8999999999999999999 788998776655554443211                               0


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+...+..+.+||.+||..||.+|||+.+++++
T Consensus       315 ~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          315 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            12235678899999999999999999999999874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=1.4e-29  Score=254.85  Aligned_cols=184  Identities=21%  Similarity=0.160  Sum_probs=130.5

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC---eEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS---SKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~---vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      .+++..+..++.||+.||.|||+.||+||||+|+||+++.++.   +||+|||+++.....  ......+||+.|+|||+
T Consensus       117 ~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~--~~~~~~~gt~~Y~APE~  194 (676)
T 3qa8_A          117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQYLAPEL  194 (676)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSC--CCCCCCCSCCTTCSSCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccc--cccccccCCcccCChHH
Confidence            5889999999999999999999999999999999999997665   899999999876432  33456789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++||||+||++|+|++|..||.+......+....   ......   ......  ...........+.....
T Consensus       195 l~~~~-~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i---~~~~~~---~~~~~~--~l~g~~~~~~~lp~p~~  265 (676)
T 3qa8_A          195 LEQKK-YTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV---REKSNE---HIVVYD--DLTGAVKFSSVLPTPNH  265 (676)
T ss_dssp             SCCSC-CSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTC---C---------CCSCC--CCSSSCCCCSSSCCSCC
T ss_pred             hccCC-CCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhh---hcccch---hhhhhh--hhccccccccccCCchh
Confidence            98775 8999999999999999999999998765432211100   000000   000000  00000000000111112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +....++.+.+||.+||.+||.+|||+.++|+||||..
T Consensus       266 l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          266 LSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            33446788999999999999999999999999999954

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.95  E-value=3.5e-29  Score=232.80  Aligned_cols=165  Identities=19%  Similarity=0.192  Sum_probs=127.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-------------Cccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-------------AMTQ  144 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-------------~~~~  144 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........             ....
T Consensus       102 ~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (310)
T 3s95_A          102 DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT  181 (310)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccc
Confidence            355788888899999999999999999999999999999999999999999999875432111             1125


Q ss_pred             ccccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhc
Q psy2865         145 EVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQ  224 (395)
Q Consensus       145 ~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  224 (395)
                      .+||+.|+|||++.+.. ++.++|||||||++|+|++|..+|...........+      ....                
T Consensus       182 ~~gt~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~------~~~~----------------  238 (310)
T 3s95_A          182 VVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL------NVRG----------------  238 (310)
T ss_dssp             CCSCGGGCCHHHHTTCC-CCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB------CHHH----------------
T ss_pred             cCCCcceeCHHHhcCCC-CCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh------hhhc----------------
Confidence            68999999999998875 899999999999999999999998754321100000      0000                


Q ss_pred             cccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         225 TRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                             ......+...++.+.+||.+||..||++|||+.++++  |+..
T Consensus       239 -------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~--~L~~  279 (310)
T 3s95_A          239 -------FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH--WLET  279 (310)
T ss_dssp             -------HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred             -------cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH--HHHH
Confidence                   0001234567788999999999999999999999987  5543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.95  E-value=4.3e-29  Score=253.57  Aligned_cols=159  Identities=18%  Similarity=0.209  Sum_probs=129.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+.......  ...+...+|..|+|||
T Consensus       463 ~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE  542 (635)
T 4fl3_A          463 NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE  542 (635)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChh
Confidence            35688888999999999999999999999999999999999999999999999987643221  2233445678999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. |+.++|||||||++|||++ |..||.+.+..+.+..+....                               .
T Consensus       543 ~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~-------------------------------~  590 (635)
T 4fl3_A          543 CINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE-------------------------------R  590 (635)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-------------------------------C
T ss_pred             hhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------C
Confidence            998876 8999999999999999998 999999988877666654321                               1


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+..++..+.+||..||..||.+|||+.++++
T Consensus       591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            1234567899999999999999999999999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=5.5e-29  Score=230.02  Aligned_cols=158  Identities=14%  Similarity=0.128  Sum_probs=127.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC---CCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP---NKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~---~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||+|+......   ....+...+|+.|+|||
T Consensus       123 ~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE  202 (298)
T 3f66_A          123 HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE  202 (298)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChH
Confidence            456777788899999999999999999999999999999999999999999998654321   11234456788999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. ++.++||||+||++|+|++ |.+||.+.+..+....+.....                               
T Consensus       203 ~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------  250 (298)
T 3f66_A          203 SLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-------------------------------  250 (298)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCC-------------------------------
T ss_pred             HhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCC-------------------------------
Confidence            998876 8999999999999999999 7788887776665555433111                               


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+...+..+.+||.+||..||.+|||+.++++
T Consensus       251 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          251 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            1223456788999999999999999999999986

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.95  E-value=1.7e-29  Score=237.17  Aligned_cols=159  Identities=18%  Similarity=0.174  Sum_probs=128.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+........ ......+|+.|+|||++
T Consensus       159 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  238 (333)
T 2i1m_A          159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI  238 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHh
Confidence            34678888899999999999999999999999999999999999999999999865332211 22344678899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|+|++ |.+||.+......+..+.....                              ...
T Consensus       239 ~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~~  287 (333)
T 2i1m_A          239 FDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY------------------------------QMA  287 (333)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTC------------------------------CCC
T ss_pred             ccCC-CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCC------------------------------CCC
Confidence            8876 8999999999999999998 9999988765554444332110                              012


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+||.+||..||.+|||+.++++
T Consensus       288 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          288 QPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            23456788999999999999999999999987

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=1.6e-29  Score=237.41  Aligned_cols=159  Identities=18%  Similarity=0.220  Sum_probs=109.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-----------Ccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-----------AMTQE  145 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-----------~~~~~  145 (395)
                      ..+++..+..++.||+.||.|||+.|  |+||||||+|||++.++.+||+|||+++........           .....
T Consensus       131 ~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (337)
T 3ll6_A          131 GPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR  210 (337)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccc
Confidence            45888899999999999999999999  999999999999999999999999999875432111           11245


Q ss_pred             cccccccchhhh---hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         146 VVTQYYRAPEIL---MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       146 ~~t~~y~aPEvl---~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                      ++|+.|+|||++   .+. .++.++|||||||++|+|++|..||.+......+...   .                    
T Consensus       211 ~~t~~y~aPE~~~~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~---~--------------------  266 (337)
T 3ll6_A          211 NTTPMYRTPEIIDLYSNF-PIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK---Y--------------------  266 (337)
T ss_dssp             -------------CCTTS-CSSHHHHHHHHHHHHHHHHHSSCCC---------------C--------------------
T ss_pred             cCCCCcCChhhhhccccC-CCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc---c--------------------
Confidence            689999999998   344 3789999999999999999999999765433221110   0                    


Q ss_pred             hccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         223 RQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                                 ........+..+.+||.+||..||.+|||+.++++|.+-
T Consensus       267 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  305 (337)
T 3ll6_A          267 -----------SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE  305 (337)
T ss_dssp             -----------CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             -----------cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                       011123445678899999999999999999999997553

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.95  E-value=5.5e-29  Score=243.47  Aligned_cols=152  Identities=14%  Similarity=0.167  Sum_probs=126.9

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcC
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA  160 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~  160 (395)
                      +++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....    ......+|..|+|||++.+.
T Consensus       286 ~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~~~~~y~aPE~~~~~  361 (450)
T 1k9a_A          286 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEALREK  361 (450)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----------CCCTTTSCHHHHHSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc----cccCCCCCcceeCHHHhcCC
Confidence            57778889999999999999999999999999999999999999999999986432    12233678899999999887


Q ss_pred             CCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         161 RHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       161 ~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      . |+.++|||||||++|||++ |..||.+.+..+.+..+....                               ....+.
T Consensus       362 ~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~-------------------------------~~~~p~  409 (450)
T 1k9a_A          362 K-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-------------------------------KMDAPD  409 (450)
T ss_dssp             C-CCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTC-------------------------------CCCCCT
T ss_pred             C-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCCCC
Confidence            6 8999999999999999998 999999877666655553211                               112446


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+++.+.+||.+||..||.+|||+.+++.
T Consensus       410 ~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          410 GCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            67899999999999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=3.4e-29  Score=231.19  Aligned_cols=174  Identities=18%  Similarity=0.248  Sum_probs=123.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......  .......+|..|+|||+
T Consensus       109 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  188 (295)
T 3ugc_A          109 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES  188 (295)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHH
Confidence            4588888899999999999999999999999999999999999999999999987543221  12334467888999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|||||||++|+|++|..+|.....  .+   ....+..........      ........    .....
T Consensus       189 ~~~~~-~~~~~Di~slG~~l~~l~~g~~~~~~~~~--~~---~~~~~~~~~~~~~~~------~~~~~~~~----~~~~~  252 (295)
T 3ugc_A          189 LTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPA--EF---MRMIGNDKQGQMIVF------HLIELLKN----NGRLP  252 (295)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHHTTCTTCSHHH--HH---HHHHCTTCCTHHHHH------HHHHHHHT----TCCCC
T ss_pred             hcCCC-CChHHHHHHHHHHHHHHHhcccccCCChH--HH---HhhhcCccccchhHH------HHHHHHhc----cCcCC
Confidence            98876 89999999999999999999998864321  11   111111111000000      00000000    01123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...++.+.+||.+||..||.+|||+.++++
T Consensus       253 ~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            45678899999999999999999999999975

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=7.6e-29  Score=233.03  Aligned_cols=160  Identities=20%  Similarity=0.261  Sum_probs=125.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........  ......+|..|+|||
T Consensus       141 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  220 (333)
T 1mqb_A          141 DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE  220 (333)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCch
Confidence            346788888999999999999999999999999999999999999999999999875432211  122335678899999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. ++.++|||||||++|+|++ |..||.+.+..+.+..+.....                               
T Consensus       221 ~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~-------------------------------  268 (333)
T 1mqb_A          221 AISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR-------------------------------  268 (333)
T ss_dssp             HHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-------------------------------
T ss_pred             hcccCC-CCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCc-------------------------------
Confidence            998765 8999999999999999998 9999988877666555533111                               


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+...+..+.+||.+||..||.+|||+.+++++
T Consensus       269 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          269 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            12234577889999999999999999999999874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.95  E-value=6e-29  Score=237.33  Aligned_cols=158  Identities=18%  Similarity=0.258  Sum_probs=118.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCC--cccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~--~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.........  .....+|..|+|||+
T Consensus       142 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~  221 (373)
T 2qol_A          142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA  221 (373)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhh
Confidence            457888889999999999999999999999999999999999999999999998764322111  122345778999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|||++ |..||.+.+..+.+..+.....                               .
T Consensus       222 ~~~~~-~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~-------------------------------~  269 (373)
T 2qol_A          222 IAYRK-FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-------------------------------L  269 (373)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEE-------------------------------C
T ss_pred             hccCC-cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------------------------------C
Confidence            98875 8999999999999999997 9999998877666555432111                               1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...+..+.+||.+||..||.+|||+.++++
T Consensus       270 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            123456788999999999999999999999886

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.95  E-value=3e-29  Score=229.91  Aligned_cols=157  Identities=21%  Similarity=0.151  Sum_probs=128.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++......  .......+|+.|+|||++.
T Consensus       117 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~  194 (284)
T 2a19_B          117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--GKRTRSKGTLRYMSPEQIS  194 (284)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCC--SCCCCCCSCCTTSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheecccc--ccccccCCcccccChhhhc
Confidence            45788888899999999999999999999999999999999999999999999876432  2344567999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. ++.++|||||||++|+|++|..+|....  .....+.                                  ...++
T Consensus       195 ~~~-~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~----------------------------------~~~~~  237 (284)
T 2a19_B          195 SQD-YGKEVDLYALGLILAELLHVCDTAFETS--KFFTDLR----------------------------------DGIIS  237 (284)
T ss_dssp             CSC-CCTHHHHHHHHHHHHHHHSCCSSHHHHH--HHHHHHH----------------------------------TTCCC
T ss_pred             cCC-CcchhhhHHHHHHHHHHHhcCCcchhHH--HHHHHhh----------------------------------ccccc
Confidence            875 8999999999999999999988764211  1111110                                  01123


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..+.+||.+||..||.+|||+.++++|.|.-.
T Consensus       238 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          238 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            456788999999999999999999999999988743

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.95  E-value=1.4e-28  Score=223.71  Aligned_cols=153  Identities=13%  Similarity=0.070  Sum_probs=127.1

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .+++..+..++.||+.||.|||+.|  |+||||||+||+++.++.++|+|||++....      ....++|+.|+|||++
T Consensus       107 ~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~------~~~~~~t~~y~aPE~~  180 (271)
T 3kmu_A          107 VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ------SPGRMYAPAWVAPEAL  180 (271)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS------CTTCBSCGGGSCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec------ccCccCCccccChhhh
Confidence            4788889999999999999999999  9999999999999999999999999876532      2345789999999999


Q ss_pred             hcCCC--CCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGARH--YSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~~~--~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+...  ++.++|||||||++|+|++|..||.+.+.......+.....                              ..
T Consensus       181 ~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------------------------------~~  230 (271)
T 3kmu_A          181 QKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL------------------------------RP  230 (271)
T ss_dssp             HSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCC------------------------------CC
T ss_pred             ccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCC------------------------------CC
Confidence            87541  23379999999999999999999998887666555432111                              11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+||.+||..||.+|||+.++++
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          231 TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            244667889999999999999999999999986

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=6.1e-29  Score=230.07  Aligned_cols=174  Identities=20%  Similarity=0.287  Sum_probs=128.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++........  .......+|..|+|||
T Consensus       120 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  199 (302)
T 4e5w_A          120 KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPE  199 (302)
T ss_dssp             TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCe
Confidence            35588888999999999999999999999999999999999999999999999987654321  2234457888999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. ++.++||||+||++|+|++|..||...     ...+....+..........       .......    ....
T Consensus       200 ~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~-------~~~~~~~----~~~~  262 (302)
T 4e5w_A          200 CLMQSK-FYIASDVWSFGVTLHELLTYCDSDSSP-----MALFLKMIGPTHGQMTVTR-------LVNTLKE----GKRL  262 (302)
T ss_dssp             HHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSH-----HHHHHHHHCSCCGGGHHHH-------HHHHHHT----TCCC
T ss_pred             eecCCC-CCcchhHHHHHHHHHHHHHccCCCcch-----hhHHhhccCCcccccCHHH-------HHHHHhc----cCCC
Confidence            998876 899999999999999999999876422     1122222222211100000       0000000    0112


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+||.+||..||.+|||+.++++
T Consensus       263 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          263 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            345678899999999999999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.95  E-value=8e-29  Score=252.52  Aligned_cols=158  Identities=18%  Similarity=0.212  Sum_probs=129.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..............+|+.|+|||++.
T Consensus       486 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~  565 (656)
T 2j0j_A          486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN  565 (656)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhc
Confidence            45778888899999999999999999999999999999999999999999999876543323334456788999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. |+.++|||||||++|||++ |.+||.+.+..+.+..+....                               ....
T Consensus       566 ~~~-~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~-------------------------------~~~~  613 (656)
T 2j0j_A          566 FRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------------------------RLPM  613 (656)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC-------------------------------CCCC
T ss_pred             CCC-CCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-------------------------------CCCC
Confidence            775 8999999999999999996 999999988777766664321                               1124


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...++.+.+||.+||..||.+|||+.++++
T Consensus       614 ~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            4567889999999999999999999999986

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=5.8e-29  Score=248.30  Aligned_cols=159  Identities=19%  Similarity=0.225  Sum_probs=131.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..............+|..|+|||++
T Consensus       357 ~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~  436 (535)
T 2h8h_A          357 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA  436 (535)
T ss_dssp             HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHh
Confidence            34578888899999999999999999999999999999999999999999999986542211122334567889999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|||++ |..||.+....+.+..+.....                               ..
T Consensus       437 ~~~~-~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-------------------------------~~  484 (535)
T 2h8h_A          437 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-------------------------------MP  484 (535)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC-------------------------------CC
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------------------------------CC
Confidence            8775 8999999999999999999 9999999887776665543111                               12


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+..++..+.+||.+||..||++|||+.+++.
T Consensus       485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            34567889999999999999999999999886

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=6.7e-29  Score=233.31  Aligned_cols=166  Identities=16%  Similarity=0.157  Sum_probs=120.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcccc--------CccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC---Ccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTID--------GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK---AMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~--------~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~---~~~~~~~  147 (395)
                      ..+++..+..++.|++.||.|||+.        ||+||||||+|||++.++.+||+|||+|+........   .....+|
T Consensus       129 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g  208 (337)
T 3mdy_A          129 TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG  208 (337)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCcc
Confidence            3588888999999999999999998        9999999999999999999999999999865432211   1235689


Q ss_pred             cccccchhhhhcCCCCCcc------chHHhHHHHHHHHHcC----------CCCCCCCCh----HhHHHHHHHhcCCCCH
Q psy2865         148 TQYYRAPEILMGARHYSAA------VDVWSVGCIFAELLGR----------RILFQAQSP----VQQLGLITDLLGTPTP  207 (395)
Q Consensus       148 t~~y~aPEvl~~~~~~~~~------~DiWSlG~il~ell~g----------~~~f~~~~~----~~~l~~i~~~~g~~~~  207 (395)
                      |+.|+|||++.+.. ++..      +|||||||++|||++|          ..||.....    ...+..+....+..+ 
T Consensus       209 t~~y~aPE~~~~~~-~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-  286 (337)
T 3mdy_A          209 TKRYMPPEVLDESL-NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRP-  286 (337)
T ss_dssp             CGGGCCHHHHTTCC-CTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC-
T ss_pred             CcceeChhhccccc-CCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCc-
Confidence            99999999998765 4554      8999999999999999          556644321    111111111100000 


Q ss_pred             HHHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         208 EEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                                            .+ .........+..+.+||.+||..||.+|||+.++++|
T Consensus       287 ----------------------~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          287 ----------------------SF-PNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             ----------------------CC-CGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ----------------------cc-cccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                                  00 0000112345678999999999999999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.7e-28  Score=248.45  Aligned_cols=162  Identities=17%  Similarity=0.173  Sum_probs=129.5

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+........  ......+|..|+|||+
T Consensus       431 ~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~  510 (613)
T 2ozo_A          431 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC  510 (613)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhh
Confidence            45788888999999999999999999999999999999999999999999999875432211  1222345688999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||++ |..||.+.+..+.+..|....                               ..
T Consensus       511 ~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~-------------------------------~~  558 (613)
T 2ozo_A          511 INFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-------------------------------RM  558 (613)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC-------------------------------CC
T ss_pred             hcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            98775 8999999999999999998 999999988777666554311                               12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHH---cCCcc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSAL---CHPYL  272 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L---~Hp~f  272 (395)
                      ..+..+++.+.+||..||..||.+|||+.+++   ++.|+
T Consensus       559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  598 (613)
T 2ozo_A          559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  598 (613)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            34466889999999999999999999999874   45554

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=6.6e-30  Score=246.00  Aligned_cols=183  Identities=17%  Similarity=0.192  Sum_probs=127.7

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceee----cCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMY----QATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~----~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +++..+..++.||+.||.|||+.||+||||||+|||+    +.++.+||+|||+|+....  .......+||+.|+|||+
T Consensus       109 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~  186 (396)
T 4eut_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFVSLYGTEEYLHPDM  186 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC--GGGSSCSSSCCTTCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC--CCccccccCCccccCHHH
Confidence            7888899999999999999999999999999999999    7778899999999987643  233455689999999999


Q ss_pred             hhcC-------CCCCccchHHhHHHHHHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC
Q psy2865         157 LMGA-------RHYSAAVDVWSVGCIFAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS  228 (395)
Q Consensus       157 l~~~-------~~~~~~~DiWSlG~il~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  228 (395)
                      +.+.       ..|+.++|||||||++|+|++|..||.+... ......+..+++..+...+.........  ...|.  
T Consensus       187 ~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~--  262 (396)
T 4eut_A          187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG--PIDWS--  262 (396)
T ss_dssp             HHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTC--CEEEE--
T ss_pred             hhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCC--CcccC--
Confidence            8752       2378899999999999999999999975432 1222222222222222111111000000  00000  


Q ss_pred             CccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         229 QSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ........+....+..+.+||.+||.+||++|+|+.+++++
T Consensus       263 ~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          263 GDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             SSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             ccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence            00111112233455678999999999999999999998653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=5.9e-29  Score=233.09  Aligned_cols=175  Identities=18%  Similarity=0.163  Sum_probs=128.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......  .......+|..|+|||
T Consensus       121 ~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  200 (327)
T 3lxl_A          121 RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE  200 (327)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHH
Confidence            34688999999999999999999999999999999999999999999999999987643221  1233456888999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. ++.++|||||||++|+|++|..||.+...... ..+ ......+.  ....        ......    ....
T Consensus       201 ~~~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-~~~-~~~~~~~~--~~~~--------~~~~~~----~~~~  263 (327)
T 3lxl_A          201 SLSDNI-FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL-RMM-GCERDVPA--LSRL--------LELLEE----GQRL  263 (327)
T ss_dssp             HHHHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-HHC-C----CCH--HHHH--------HHHHHT----TCCC
T ss_pred             HhccCC-CChHHhHHHHHHHHHHHHhCCCCCccccchhh-hhc-cccccccc--HHHH--------HHHhhc----ccCC
Confidence            998876 89999999999999999999999875432111 000 00000000  0000        000000    0112


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...++.+.+||.+||..||.+|||+.++++|
T Consensus       264 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          264 PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3356788999999999999999999999999654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=3.6e-28  Score=226.68  Aligned_cols=159  Identities=18%  Similarity=0.142  Sum_probs=123.8

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC----CCCCcccccccccccch
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD----PNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~----~~~~~~~~~~t~~y~aP  154 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++ ++.++|+|||+++.....    .........||+.|+||
T Consensus       125 ~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aP  203 (319)
T 2y4i_B          125 IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP  203 (319)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccCh
Confidence            3578888999999999999999999999999999999998 689999999998754321    11233445789999999


Q ss_pred             hhhhcC--------CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc
Q psy2865         155 EILMGA--------RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR  226 (395)
Q Consensus       155 Evl~~~--------~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  226 (395)
                      |++.+.        ..|+.++|||||||++|+|++|..||.+.+....+..+......                      
T Consensus       204 E~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----------------------  261 (319)
T 2y4i_B          204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP----------------------  261 (319)
T ss_dssp             HHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC----------------------
T ss_pred             HHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC----------------------
Confidence            999752        23788999999999999999999999988776655554321100                      


Q ss_pred             cCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         227 KSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                              .......+..+.+||.+||..||.+|||+.++++
T Consensus       262 --------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          262 --------NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             --------CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             --------CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                    0111246678999999999999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.94  E-value=4.8e-29  Score=231.38  Aligned_cols=171  Identities=18%  Similarity=0.157  Sum_probs=126.1

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++......... .....+||+.|+|||++.
T Consensus       129 ~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  208 (307)
T 2nru_A          129 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR  208 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc
Confidence            4777888899999999999999999999999999999999999999999999865432211 233457899999999987


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.  ++.++|||||||++|+|++|.+||.+......+..+...+...... +..       .     ..    ..+...+
T Consensus       209 ~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~-----~~----~~~~~~~  269 (307)
T 2nru_A          209 GE--ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT-IED-------Y-----ID----KKMNDAD  269 (307)
T ss_dssp             TE--ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCC-HHH-------H-----SC----SSCSCCC
T ss_pred             CC--CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhh-hhh-------h-----cc----ccccccc
Confidence            63  7899999999999999999999998765544333332211100000 000       0     00    0001112


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ...+..+.+||.+||..||.+|||+.+++++
T Consensus       270 ~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            2334678899999999999999999999864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.94  E-value=4.4e-29  Score=237.62  Aligned_cols=157  Identities=10%  Similarity=-0.012  Sum_probs=122.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-----------CCCeEEeeCCcccccCC-CCCCCcccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-----------TYSSKICDFGLARVEEP-DPNKAMTQE  145 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-----------~~~vKl~DFGla~~~~~-~~~~~~~~~  145 (395)
                      ...+++..+..++.||+.||.|||+.|||||||||+|||++.           ++.+||+|||+|+.... ......+..
T Consensus       166 ~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  245 (365)
T 3e7e_A          166 EKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK  245 (365)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCS
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeee
Confidence            356888899999999999999999999999999999999998           89999999999975431 123345667


Q ss_pred             cccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcc
Q psy2865         146 VVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQT  225 (395)
Q Consensus       146 ~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  225 (395)
                      +||+.|+|||++.+.. |+.++|||||||++|+|++|.+||........                               
T Consensus       246 ~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------------------------------  293 (365)
T 3e7e_A          246 CETSGFQCVEMLSNKP-WNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-------------------------------  293 (365)
T ss_dssp             SCTTSCCCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-------------------------------
T ss_pred             cCCCCCCChHHhcCCC-CCccccHHHHHHHHHHHHhCCCccccCCCCce-------------------------------
Confidence            8999999999999876 89999999999999999999999965432100                               


Q ss_pred             ccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         226 RKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      .    ....+.. ...+..+.+++..||..+|.+|++..+.|.+.+
T Consensus       294 ~----~~~~~~~-~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l  334 (365)
T 3e7e_A          294 K----PEGLFRR-LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL  334 (365)
T ss_dssp             E----ECSCCTT-CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred             e----echhccc-cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence            0    0000000 123557789999999999999976655555443

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=4.1e-28  Score=225.53  Aligned_cols=159  Identities=22%  Similarity=0.237  Sum_probs=115.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++...... ........+|+.|+|||++
T Consensus       130 ~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~  208 (310)
T 2wqm_A          130 KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-TTAAHSLVGTPYYMSPERI  208 (310)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------------------CCSSCCHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC-CccccccCCCeeEeChHHh
Confidence            455788888999999999999999999999999999999999999999999999865432 2223445789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCCh--HhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSP--VQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~--~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+.. ++.++|||||||++|+|++|..||.+...  ......+.. ...+                             .
T Consensus       209 ~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~-----------------------------~  257 (310)
T 2wqm_A          209 HENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-CDYP-----------------------------P  257 (310)
T ss_dssp             TTCC-CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT-TCSC-----------------------------C
T ss_pred             CCCC-CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc-ccCC-----------------------------C
Confidence            8875 89999999999999999999999976532  111122111 0000                             0


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ......+..+.+||.+||..||.+|||+.++++
T Consensus       258 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          258 LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            112456789999999999999999999999987

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=3e-28  Score=227.42  Aligned_cols=172  Identities=19%  Similarity=0.212  Sum_probs=125.9

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEvl  157 (395)
                      .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++........  .......+|..|+|||++
T Consensus       130 ~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~  209 (318)
T 3lxp_A          130 SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL  209 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHh
Confidence            378888899999999999999999999999999999999999999999999987643221  123345678899999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+.. ++.++|||||||++|+|++|..||......     .....+......-..    .......   .    ......
T Consensus       210 ~~~~-~~~~~Di~slG~il~~ll~g~~p~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~~~---~----~~~~~~  272 (318)
T 3lxp_A          210 KEYK-FYYASDVWSFGVTLYELLTHCDSSQSPPTK-----FLELIGIAQGQMTVL----RLTELLE---R----GERLPR  272 (318)
T ss_dssp             HHCE-EEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-----HHHHHCSCCHHHHHH----HHHHHHH---T----TCCCCC
T ss_pred             cCCC-CCcHHHHHHHHHHHHHHHhCCCcccccchh-----hhhhhcccccchhHH----HHHHHHh---c----ccCCCC
Confidence            8876 899999999999999999999998653221     111111111100000    0000000   0    011234


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...++.+.+||.+||..||.+|||+.++++
T Consensus       273 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          273 PDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            4667899999999999999999999999985

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.94  E-value=1.5e-28  Score=227.45  Aligned_cols=148  Identities=19%  Similarity=0.271  Sum_probs=113.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.   ++.+||+|||+|....                    
T Consensus       112 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~--------------------  171 (299)
T 3m2w_A          112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--------------------  171 (299)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc--------------------
Confidence            35888999999999999999999999999999999999998   7889999999987532                    


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                         +. .|+.++||||+||++|+|++|.+||.+.+.......+.....                        ........
T Consensus       172 ---~~-~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~------------------------~~~~~~~~  223 (299)
T 3m2w_A          172 ---GE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR------------------------MGQYEFPN  223 (299)
T ss_dssp             ---TC-GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSC------------------------TTCCSSCH
T ss_pred             ---cc-cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHh------------------------hccccCCc
Confidence               12 378899999999999999999999987654322111100000                        00000001


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       224 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~  262 (299)
T 3m2w_A          224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  262 (299)
T ss_dssp             HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             hhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence            112567889999999999999999999999999999975

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.94  E-value=5.9e-29  Score=234.02  Aligned_cols=157  Identities=15%  Similarity=0.101  Sum_probs=119.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcc-ccCccccCCCCCceeecCCC--------------------CeEEeeCCcccccCCC
Q psy2865          79 KKRSSRRKPFKLSEISATRPDST-IDGYQARQPTRQLVMYQATY--------------------SSKICDFGLARVEEPD  137 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH-~~~iiHrDlkp~Nil~~~~~--------------------~vKl~DFGla~~~~~~  137 (395)
                      ..+++..++.++.||+.||.||| +.||+||||||+|||++.++                    .+||+|||+|+.... 
T Consensus       156 ~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-  234 (336)
T 2vuw_A          156 KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-  234 (336)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-
Confidence            35788899999999999999999 99999999999999999887                    899999999987532 


Q ss_pred             CCCCcccccccccccchhhhhcCCCCCccchHHhHHHH-HHHHHcCCCCCCCCCh-HhHHHHHHHhcCCCCHHHHHhhhh
Q psy2865         138 PNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCI-FAELLGRRILFQAQSP-VQQLGLITDLLGTPTPEEMRHACD  215 (395)
Q Consensus       138 ~~~~~~~~~~t~~y~aPEvl~~~~~~~~~~DiWSlG~i-l~ell~g~~~f~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~  215 (395)
                           ...+||+.|+|||++.+..  +.++||||++++ .+++++|..||.+... ......+........         
T Consensus       235 -----~~~~gt~~y~aPE~~~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------  298 (336)
T 2vuw_A          235 -----GIVVFCDVSMDEDLFTGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT---------  298 (336)
T ss_dssp             -----TEEECCCCTTCSGGGCCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS---------
T ss_pred             -----CcEEEeecccChhhhcCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc---------
Confidence                 2348999999999998754  889999998877 6778889888843211 111112211100000         


Q ss_pred             hhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHH-cCCccc
Q psy2865         216 GAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSAL-CHPYLD  273 (395)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L-~Hp~f~  273 (395)
                                      ......+...++.+.+||.+||.+|     ||.|+| +||||+
T Consensus       299 ----------------~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          299 ----------------KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             ----------------CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ----------------ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                            0001122345778999999999987     999999 999994

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.94  E-value=1.4e-28  Score=229.27  Aligned_cols=162  Identities=17%  Similarity=0.209  Sum_probs=123.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--------Ccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--------AMTQEVVTQ  149 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--------~~~~~~~t~  149 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++.........        ......||+
T Consensus       128 ~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~  207 (317)
T 2buj_A          128 GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI  207 (317)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCc
Confidence            456888999999999999999999999999999999999999999999999998764311000        112346799


Q ss_pred             cccchhhhhcCC--CCCccchHHhHHHHHHHHHcCCCCCCCCChH-hHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccc
Q psy2865         150 YYRAPEILMGAR--HYSAAVDVWSVGCIFAELLGRRILFQAQSPV-QQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR  226 (395)
Q Consensus       150 ~y~aPEvl~~~~--~~~~~~DiWSlG~il~ell~g~~~f~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  226 (395)
                      .|+|||++.+..  .++.++|||||||++|+|++|..||.+.... ..+......                         
T Consensus       208 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-------------------------  262 (317)
T 2buj_A          208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-------------------------  262 (317)
T ss_dssp             GGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-------------------------
T ss_pred             ccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-------------------------
Confidence            999999987543  2688999999999999999999999532110 011111000                         


Q ss_pred             cCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         227 KSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                           ..........+..+.+||.+||..||.+|||+.++++|
T Consensus       263 -----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          263 -----QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             -----C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence                 00012234678899999999999999999999999985

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=1.3e-27  Score=225.01  Aligned_cols=167  Identities=15%  Similarity=0.165  Sum_probs=121.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcc--------ccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC---Ccccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDST--------IDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK---AMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH--------~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~---~~~~~~~  147 (395)
                      ..+++..+..++.||+.||.|||        +.||+||||||+|||++.++.+||+|||+++........   .....+|
T Consensus       134 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~g  213 (342)
T 1b6c_B          134 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG  213 (342)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCC
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCc
Confidence            35788888999999999999999        899999999999999999999999999999865432211   2345589


Q ss_pred             cccccchhhhhcCCC-----CCccchHHhHHHHHHHHHcC----------CCCCCCCCh----HhHHHHHHHhcCCCCHH
Q psy2865         148 TQYYRAPEILMGARH-----YSAAVDVWSVGCIFAELLGR----------RILFQAQSP----VQQLGLITDLLGTPTPE  208 (395)
Q Consensus       148 t~~y~aPEvl~~~~~-----~~~~~DiWSlG~il~ell~g----------~~~f~~~~~----~~~l~~i~~~~g~~~~~  208 (395)
                      |+.|+|||++.+...     ++.++|||||||++|+|++|          ..||.....    ...+.......+..   
T Consensus       214 t~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---  290 (342)
T 1b6c_B          214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR---  290 (342)
T ss_dssp             CGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC---
T ss_pred             CcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhC---
Confidence            999999999976532     23689999999999999999          677765422    11111111000000   


Q ss_pred             HHHhhhhhhhhhhhhccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         209 EMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                                         . .+... .........+.+||.+||..||.+|||+.++++|
T Consensus       291 -------------------~-~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          291 -------------------P-NIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             -------------------C-CCCGG-GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             -------------------C-CCccc-ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                               0 00000 0112334578899999999999999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.2e-27  Score=224.13  Aligned_cols=174  Identities=18%  Similarity=0.226  Sum_probs=126.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++.......  .......+|..|+|||+
T Consensus       140 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  219 (326)
T 2w1i_A          140 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES  219 (326)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchh
Confidence            3578888889999999999999999999999999999999999999999999987643221  11233467788999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. ++.++|||||||++|+|++|..+|....  .   .+....+......+...   ........   .    ....
T Consensus       220 ~~~~~-~~~~~Di~slG~il~el~tg~~~~~~~~--~---~~~~~~~~~~~~~~~~~---~~~~~~~~---~----~~~~  283 (326)
T 2w1i_A          220 LTESK-FSVASDVWSFGVVLYELFTYIEKSKSPP--A---EFMRMIGNDKQGQMIVF---HLIELLKN---N----GRLP  283 (326)
T ss_dssp             HHHCE-EEHHHHHHHHHHHHHHHHHTTCGGGSHH--H---HHHHHHCTTCCTHHHHH---HHHHHHHT---T----CCCC
T ss_pred             hcCCC-CCchhhHHHHHHHHHHHHhcCCCCCCCH--H---HHHHhhccccchhhhHH---HHHHHhhc---C----CCCC
Confidence            98876 8999999999999999999998875421  1   11111222111000000   00000000   0    0112


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .+...+..+.+||.+||..||.+|||+.++++
T Consensus       284 ~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          284 RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            34567899999999999999999999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.91  E-value=1.4e-26  Score=237.75  Aligned_cols=149  Identities=18%  Similarity=0.141  Sum_probs=122.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhc
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~  159 (395)
                      .+++..+..++.||+.||.|||+.|||||||||+|||++.+ .+||+|||+++....     .+..+||+.|+|||++.+
T Consensus       178 ~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~-----~~~~~gt~~y~aPE~~~~  251 (681)
T 2pzi_A          178 KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS-----FGYLYGTPGFQAPEIVRT  251 (681)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC-----CSCCCCCTTTSCTTHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhccc-----CCccCCCccccCHHHHcC
Confidence            58888899999999999999999999999999999999875 899999999987542     245689999999999976


Q ss_pred             CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS  239 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (395)
                      .  ++.++|||||||++|+|++|.++|.+....          +.+..                        ...    .
T Consensus       252 ~--~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------~~~~~------------------------~~~----~  291 (681)
T 2pzi_A          252 G--PTVATDIYTVGRTLAALTLDLPTRNGRYVD----------GLPED------------------------DPV----L  291 (681)
T ss_dssp             C--SCHHHHHHHHHHHHHHHHSCCCEETTEECS----------SCCTT------------------------CHH----H
T ss_pred             C--CCCceehhhhHHHHHHHHhCCCCCcccccc----------ccccc------------------------ccc----c
Confidence            4  488999999999999999999888753210          00000                        000    1


Q ss_pred             CCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         240 QATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       240 ~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..++.+.+||.+||..||.+||++.+++.|+|+..
T Consensus       292 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          292 KTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            12467889999999999999999999999999853

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.86  E-value=1.1e-23  Score=193.57  Aligned_cols=131  Identities=10%  Similarity=-0.025  Sum_probs=101.4

Q ss_pred             CCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcCCC
Q psy2865          83 SRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARH  162 (395)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~~  162 (395)
                      ...+..++.||+.||.|||+.||+||||||+|||++.++.+||+++|.                     ++        .
T Consensus       128 ~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~---------------------~~--------~  178 (286)
T 3uqc_A          128 PVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT---------------------MP--------D  178 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC---------------------CT--------T
T ss_pred             hHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc---------------------cC--------C
Confidence            334677899999999999999999999999999999999999985542                     22        2


Q ss_pred             CCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccCCCCC
Q psy2865         163 YSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT  242 (395)
Q Consensus       163 ~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (395)
                      ++.++|||||||++|+|++|..||.+.+....+.......                         ..............+
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~  233 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDT-------------------------AGQPIEPADIDRDIP  233 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCT-------------------------TSCBCCHHHHCTTSC
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHh-------------------------ccCCCChhhcccCCC
Confidence            7889999999999999999999999876433211000000                         000111223456788


Q ss_pred             HHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         243 GEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       243 ~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +.+.+||.+||..||.+| |+.++++
T Consensus       234 ~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          234 FQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHHHHHHHcccCCccC-CHHHHHH
Confidence            999999999999999999 9999987

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.83  E-value=2.1e-23  Score=208.93  Aligned_cols=94  Identities=16%  Similarity=0.007  Sum_probs=66.0

Q ss_pred             chhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhhcCCCCCcc
Q psy2865          87 PFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAA  166 (395)
Q Consensus        87 ~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~~~~~~~~~  166 (395)
                      ..++.||+.||.|+|+.|||||||||+|||++.+|.|||+|||+|+....+ ....++.+||+.|+|||++.|.  +...
T Consensus       342 ~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~-~~~~~t~vGTp~YmAPE~l~g~--~~~~  418 (569)
T 4azs_A          342 EKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD-CSWPTNLVQSFFVFVNELFAEN--KSWN  418 (569)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----CCSHHHHHHHHHHHHHHC---------
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC-CccccCceechhhccHHHhCCC--CCCc
Confidence            358999999999999999999999999999999999999999999876543 2345667999999999999874  5778


Q ss_pred             chHHhHHHHHHHHHcCC
Q psy2865         167 VDVWSVGCIFAELLGRR  183 (395)
Q Consensus       167 ~DiWSlG~il~ell~g~  183 (395)
                      +|+||+||++++|+++.
T Consensus       419 ~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          419 GFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             ----------CCCCTTH
T ss_pred             ccccccccchhhhcccc
Confidence            99999999988776553

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.55  E-value=1.6e-16  Score=158.06  Aligned_cols=98  Identities=17%  Similarity=0.187  Sum_probs=80.9

Q ss_pred             CchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC------Ccccccccccccchhhhhc
Q psy2865          86 KPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK------AMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        86 ~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~------~~~~~~~t~~y~aPEvl~~  159 (395)
                      +..++.||+.||.|||+.||+||||||+|||++.  .+||+|||+|+........      .....+||+.|+|||++.+
T Consensus       433 ~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~  510 (540)
T 3en9_A          433 NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWER  510 (540)
T ss_dssp             CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence            6789999999999999999999999999999998  9999999999976432111      1235689999999999975


Q ss_pred             --CCCCCccchHHhHHHHHHHHHcCCCCC
Q psy2865         160 --ARHYSAAVDVWSVGCIFAELLGRRILF  186 (395)
Q Consensus       160 --~~~~~~~~DiWSlG~il~ell~g~~~f  186 (395)
                        .. |+..+|+||...-..+.+.++..|
T Consensus       511 ~~~~-Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          511 FLEG-YKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHH-HHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             HHHH-HHHHHhHHHHHHHHHHHHHhcccc
Confidence              44 788899999988887777655544

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.30  E-value=2.3e-13  Score=124.18  Aligned_cols=60  Identities=17%  Similarity=-0.036  Sum_probs=52.8

Q ss_pred             CCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          84 RRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        84 ~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      .....++.||+.||.|||+.||+||||||+|||++ ++.+||+|||+|+.              +..|+|||++.
T Consensus       193 ~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          193 ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE--------------VGEEGWREILE  252 (282)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence            44557999999999999999999999999999999 99999999999974              23478999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.96  E-value=1.1e-10  Score=104.86  Aligned_cols=51  Identities=10%  Similarity=-0.014  Sum_probs=46.9

Q ss_pred             cCCCCchhhHHhhcCCCCcc-ccCccccCCCCCceeecCCCCeEEeeCCccccc
Q psy2865          82 SSRRKPFKLSEISATRPDST-IDGYQARQPTRQLVMYQATYSSKICDFGLARVE  134 (395)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lH-~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~  134 (395)
                      ++..+..++.||+.|+.||| ..||+||||||.|||++.  .++|+|||+|...
T Consensus       168 ~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          168 KELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            45677889999999999999 999999999999999998  8999999999763

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=98.69  E-value=2.1e-09  Score=98.70  Aligned_cols=40  Identities=33%  Similarity=0.563  Sum_probs=35.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       134 ~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl  173 (311)
T 4aw0_A          134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI  173 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEE
Confidence            3445678899999999999999999999999999998875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.68  E-value=1.4e-09  Score=99.84  Aligned_cols=40  Identities=28%  Similarity=0.612  Sum_probs=35.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       120 ~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A          120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEE
Confidence            3456678899999999999999999999999999998875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.68  E-value=2.3e-09  Score=99.88  Aligned_cols=40  Identities=28%  Similarity=0.438  Sum_probs=36.0

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       172 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl  211 (346)
T 4fih_A          172 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL  211 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEE
Confidence            4456678899999999999999999999999999999885

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.67  E-value=1.7e-09  Score=99.27  Aligned_cols=40  Identities=28%  Similarity=0.549  Sum_probs=36.0

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+++||||||||+||||+.+|.+||
T Consensus       134 ~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki  173 (307)
T 3omv_A          134 LIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKI  173 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEE
Confidence            4556778899999999999999999999999999988875

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=98.67  E-value=3e-09  Score=96.09  Aligned_cols=40  Identities=30%  Similarity=0.505  Sum_probs=35.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       114 ~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl  153 (275)
T 3hyh_A          114 ARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKI  153 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEE
Confidence            4455677899999999999999999999999999998875

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=98.67  E-value=2.6e-09  Score=99.71  Aligned_cols=40  Identities=28%  Similarity=0.427  Sum_probs=36.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       127 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl  166 (350)
T 4b9d_A          127 ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQL  166 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEE
Confidence            4456678899999999999999999999999999999885

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.66  E-value=4e-09  Score=100.85  Aligned_cols=40  Identities=28%  Similarity=0.438  Sum_probs=36.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       249 ~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl  288 (423)
T 4fie_A          249 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL  288 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEE
Confidence            4456678899999999999999999999999999999885

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=98.65  E-value=3e-09  Score=98.75  Aligned_cols=40  Identities=35%  Similarity=0.559  Sum_probs=35.0

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCc-ccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI-LKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~-~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|. +||
T Consensus       152 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl  192 (336)
T 4g3f_A          152 ALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL  192 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEE
Confidence            4556778899999999999999999999999999874 764

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=98.64  E-value=3e-09  Score=97.42  Aligned_cols=40  Identities=30%  Similarity=0.356  Sum_probs=35.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       128 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl  167 (304)
T 3ubd_A          128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL  167 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEe
Confidence            3445678899999999999999999999999999998875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.56  E-value=7.3e-09  Score=98.78  Aligned_cols=40  Identities=50%  Similarity=0.791  Sum_probs=35.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       160 ~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki  199 (398)
T 4b99_A          160 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI  199 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEE
Confidence            4456678899999999999999999999999999998875

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.55  E-value=7.1e-09  Score=94.41  Aligned_cols=40  Identities=28%  Similarity=0.443  Sum_probs=34.6

Q ss_pred             ccCcchhhhhcccccccCc--eEecCCCCCCeeecC-CCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSAR--ILHRDIKPGNLLVNS-NCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~--~~hr~~~~~n~~~~~-~~~~k~  395 (395)
                      +..++.|++.||.|||++|  ||||||||+||||+. +|.+||
T Consensus       131 ~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl  173 (290)
T 3fpq_A          131 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI  173 (290)
T ss_dssp             HHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEE
Confidence            4456678899999999998  999999999999985 688875

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.55  E-value=9.1e-09  Score=102.85  Aligned_cols=38  Identities=21%  Similarity=0.354  Sum_probs=35.2

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|+|++|||||||||+||||+.+|.+||
T Consensus       343 ~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL  380 (569)
T 4azs_A          343 KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARL  380 (569)
T ss_dssp             HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEE
Confidence            36679999999999999999999999999999998885

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.54  E-value=6.7e-09  Score=97.81  Aligned_cols=39  Identities=36%  Similarity=0.473  Sum_probs=33.4

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCC-CcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN-CILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~-~~~k~  395 (395)
                      ..++.|++.||.|||++|||||||||+||||+.+ |.+||
T Consensus       120 ~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl  159 (361)
T 4f9c_A          120 REYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYAL  159 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEE
Confidence            3455677999999999999999999999999876 66664

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.53  E-value=4.9e-09  Score=96.02  Aligned_cols=40  Identities=28%  Similarity=0.419  Sum_probs=35.9

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+++||||||||+||||+.++.+||
T Consensus       130 ~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A          130 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEE
Confidence            3456778899999999999999999999999999988875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.49  E-value=1.7e-08  Score=101.44  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=36.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       294 a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL  333 (689)
T 3v5w_A          294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI  333 (689)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEe
Confidence            4446678899999999999999999999999999999885

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.49  E-value=9e-09  Score=95.60  Aligned_cols=39  Identities=26%  Similarity=0.406  Sum_probs=35.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+++||||||||+||||+.++.+||
T Consensus       161 ~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki  199 (329)
T 4aoj_A          161 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI  199 (329)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEE
Confidence            345677899999999999999999999999999998875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.48  E-value=8e-09  Score=95.02  Aligned_cols=39  Identities=23%  Similarity=0.407  Sum_probs=34.8

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+++||||||||+||||+.++.+||
T Consensus       148 ~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki  186 (308)
T 4gt4_A          148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI  186 (308)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEE
Confidence            345667899999999999999999999999999988875

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.48  E-value=1.1e-08  Score=95.90  Aligned_cols=39  Identities=26%  Similarity=0.445  Sum_probs=35.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+++||||||||+||||+.+|.+||
T Consensus       188 ~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi  226 (353)
T 4ase_A          188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI  226 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEE
Confidence            446678899999999999999999999999999998885

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=98.44  E-value=2.8e-08  Score=91.32  Aligned_cols=39  Identities=33%  Similarity=0.369  Sum_probs=34.7

Q ss_pred             cCcchhhhhcccccccC--------ceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSA--------RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~--------~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++        +||||||||+||||+.+|.+||
T Consensus       103 ~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki  149 (303)
T 3hmm_A          103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  149 (303)
T ss_dssp             HHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEE
Confidence            44567889999999987        9999999999999999998885

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.40  E-value=3.7e-08  Score=92.77  Aligned_cols=50  Identities=8%  Similarity=-0.041  Sum_probs=44.0

Q ss_pred             CCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCC----------eEEeeCCcccc
Q psy2865          84 RRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYS----------SKICDFGLARV  133 (395)
Q Consensus        84 ~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~----------vKl~DFGla~~  133 (395)
                      ..+..++.||+.++.+||..|||||||||.|||++.++.          +.|+||+.+..
T Consensus       205 ~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          205 PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            445678899999999999999999999999999987763          88999998764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.21  E-value=2.2e-07  Score=87.74  Aligned_cols=38  Identities=18%  Similarity=0.254  Sum_probs=34.4

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       198 ~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL  235 (371)
T 3q60_A          198 ILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLML  235 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEE
Confidence            44578899999999999999999999999999988775

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.16  E-value=2.4e-07  Score=90.15  Aligned_cols=39  Identities=46%  Similarity=0.697  Sum_probs=34.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.|||||||||+||||+.+|.+||
T Consensus       159 ~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl  197 (458)
T 3rp9_A          159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKV  197 (458)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEee
Confidence            345667799999999999999999999999999988875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=98.16  E-value=1.4e-07  Score=94.17  Aligned_cols=40  Identities=25%  Similarity=0.398  Sum_probs=33.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCC--CcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN--CILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~--~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+..  |.+||
T Consensus       257 ~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl  298 (573)
T 3uto_A          257 AVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKL  298 (573)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEE
Confidence            34456778999999999999999999999999864  66664

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.15  E-value=2.9e-07  Score=88.34  Aligned_cols=38  Identities=13%  Similarity=0.231  Sum_probs=34.0

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       215 ~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL  252 (413)
T 3dzo_A          215 QLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFL  252 (413)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEE
Confidence            34567799999999999999999999999999988774

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.14  E-value=2.3e-07  Score=87.33  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=30.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.
T Consensus       174 ~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~  207 (365)
T 3e7e_A          174 VISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGN  207 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECG
T ss_pred             HHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecc
Confidence            4556678899999999999999999999999988

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.13  E-value=2.8e-07  Score=86.54  Aligned_cols=39  Identities=26%  Similarity=0.338  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       127 ~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL  165 (353)
T 3txo_A          127 RFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKL  165 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEE
Confidence            345667799999999999999999999999999988774

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.13  E-value=3.3e-07  Score=86.77  Aligned_cols=39  Identities=13%  Similarity=0.249  Sum_probs=34.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       209 ~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL  247 (377)
T 3byv_A          209 LQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFL  247 (377)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            345677899999999999999999999999999988774

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.13  E-value=3.3e-07  Score=87.10  Aligned_cols=37  Identities=46%  Similarity=0.792  Sum_probs=33.6

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       114 i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl  150 (388)
T 3oz6_A          114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKV  150 (388)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEe
Confidence            4567799999999999999999999999999988774

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.13  E-value=2.6e-07  Score=84.05  Aligned_cols=37  Identities=11%  Similarity=0.002  Sum_probs=33.5

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       134 i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl  170 (286)
T 3uqc_A          134 AMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVL  170 (286)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEE
T ss_pred             HHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEE
Confidence            4567799999999999999999999999999988764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.11  E-value=3.2e-07  Score=88.65  Aligned_cols=39  Identities=26%  Similarity=0.402  Sum_probs=34.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       178 ~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL  216 (437)
T 4aw2_A          178 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRL  216 (437)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEE
Confidence            345667799999999999999999999999999988875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.11  E-value=4e-07  Score=84.28  Aligned_cols=40  Identities=23%  Similarity=0.343  Sum_probs=35.0

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       117 ~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl  156 (325)
T 3kex_A          117 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQV  156 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEE
Confidence            4455677899999999999999999999999999887764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.10  E-value=3.7e-07  Score=87.52  Aligned_cols=39  Identities=23%  Similarity=0.354  Sum_probs=34.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       165 ~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL  203 (412)
T 2vd5_A          165 RFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRL  203 (412)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEE
Confidence            345667899999999999999999999999999988774

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.09  E-value=3.9e-07  Score=86.84  Aligned_cols=39  Identities=31%  Similarity=0.385  Sum_probs=34.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       156 ~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL  194 (396)
T 4dc2_A          156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKL  194 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEE
Confidence            345667799999999999999999999999999988774

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.08  E-value=5.5e-07  Score=81.73  Aligned_cols=36  Identities=17%  Similarity=0.144  Sum_probs=32.1

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+ +|.+||
T Consensus       198 i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl  233 (282)
T 1zar_A          198 VLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWI  233 (282)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEE
T ss_pred             HHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEE
Confidence            456779999999999999999999999999 877764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.08  E-value=4.1e-07  Score=84.78  Aligned_cols=39  Identities=31%  Similarity=0.423  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       108 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL  146 (337)
T 1o6l_A          108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI  146 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEE
Confidence            345567799999999999999999999999999988764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.07  E-value=5e-07  Score=87.18  Aligned_cols=40  Identities=30%  Similarity=0.542  Sum_probs=35.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       131 ~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL  170 (432)
T 3n9x_A          131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKV  170 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEE
Confidence            3445667799999999999999999999999999988775

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.07  E-value=4.9e-07  Score=86.58  Aligned_cols=39  Identities=31%  Similarity=0.466  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       171 ~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL  209 (410)
T 3v8s_A          171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKL  209 (410)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEE
Confidence            345667899999999999999999999999999988774

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.07  E-value=2.8e-07  Score=85.74  Aligned_cols=34  Identities=29%  Similarity=0.331  Sum_probs=30.5

Q ss_pred             Ccchhhhhcccccc-cCceEecCCCCCCeeecCCC
Q psy2865         358 NPQSAAFKSLKYLH-SARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       358 ~~~~qi~~gl~y~h-~~~~~hr~~~~~n~~~~~~~  391 (395)
                      .++.|++.||.||| +.||+||||||+||||+.+|
T Consensus       165 ~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~  199 (336)
T 2vuw_A          165 SILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTS  199 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECS
T ss_pred             HHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccC
Confidence            34567799999999 99999999999999999886

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.07  E-value=4.3e-07  Score=85.49  Aligned_cols=40  Identities=28%  Similarity=0.419  Sum_probs=34.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeec--CCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVN--SNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~--~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+  .+|.+||
T Consensus       154 ~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl  195 (364)
T 3op5_A          154 VLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYL  195 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEE
Confidence            455677889999999999999999999999998  6676664

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.07  E-value=4.5e-07  Score=85.11  Aligned_cols=39  Identities=26%  Similarity=0.327  Sum_probs=34.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       124 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL  162 (353)
T 2i0e_A          124 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI  162 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEE
Confidence            445677899999999999999999999999999988764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.07  E-value=5.7e-07  Score=83.10  Aligned_cols=38  Identities=37%  Similarity=0.552  Sum_probs=34.0

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       110 ~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL  147 (318)
T 1fot_A          110 FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKI  147 (318)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEE
Confidence            35567799999999999999999999999999988764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.07  E-value=4e-07  Score=86.01  Aligned_cols=39  Identities=28%  Similarity=0.513  Sum_probs=34.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       206 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl  244 (370)
T 2psq_A          206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI  244 (370)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEE
Confidence            445678899999999999999999999999999988774

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.07  E-value=4.6e-07  Score=84.75  Aligned_cols=39  Identities=28%  Similarity=0.409  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       121 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL  159 (345)
T 1xjd_A          121 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI  159 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEE
Confidence            345667899999999999999999999999999988764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.06  E-value=5.5e-07  Score=85.47  Aligned_cols=39  Identities=31%  Similarity=0.503  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       118 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL  156 (384)
T 4fr4_A          118 KLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHI  156 (384)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEE
Confidence            345667799999999999999999999999999988774

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.06  E-value=4.3e-07  Score=83.91  Aligned_cols=40  Identities=28%  Similarity=0.615  Sum_probs=35.2

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       166 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL  205 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV  205 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEE
Confidence            3456678899999999999999999999999999887764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.06  E-value=4.9e-07  Score=84.54  Aligned_cols=39  Identities=31%  Similarity=0.385  Sum_probs=34.4

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       113 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL  151 (345)
T 3a8x_A          113 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKL  151 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEE
Confidence            345567799999999999999999999999999988764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.05  E-value=5e-07  Score=82.16  Aligned_cols=39  Identities=44%  Similarity=0.585  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       104 ~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl  142 (292)
T 3o0g_A          104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL  142 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            345567799999999999999999999999999987764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.05  E-value=4.8e-07  Score=88.14  Aligned_cols=38  Identities=45%  Similarity=0.688  Sum_probs=34.1

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       168 ~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl  205 (464)
T 3ttj_A          168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  205 (464)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEE
Confidence            35567799999999999999999999999999988775

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.05  E-value=5.7e-07  Score=84.27  Aligned_cols=39  Identities=28%  Similarity=0.472  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       144 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL  182 (350)
T 1rdq_E          144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV  182 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEE
Confidence            345667799999999999999999999999999988764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.04  E-value=5.2e-07  Score=85.34  Aligned_cols=38  Identities=34%  Similarity=0.477  Sum_probs=34.1

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       143 ~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL  180 (373)
T 2r5t_A          143 FYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVL  180 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEE
Confidence            35667799999999999999999999999999988764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.04  E-value=3.4e-07  Score=84.82  Aligned_cols=40  Identities=30%  Similarity=0.435  Sum_probs=34.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       119 ~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl  158 (327)
T 3poz_A          119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI  158 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEE
Confidence            3445677899999999999999999999999999887764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.04  E-value=6.4e-07  Score=85.09  Aligned_cols=39  Identities=21%  Similarity=0.405  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       131 ~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl  169 (389)
T 3gni_B          131 AYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYL  169 (389)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEE
Confidence            345567799999999999999999999999999887764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.03  E-value=5.5e-07  Score=83.57  Aligned_cols=38  Identities=32%  Similarity=0.564  Sum_probs=33.7

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       118 ~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl  155 (328)
T 3fe3_A          118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKI  155 (328)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEE
Confidence            34567799999999999999999999999999988764

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.03  E-value=9.1e-07  Score=90.22  Aligned_cols=39  Identities=26%  Similarity=0.327  Sum_probs=35.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.|||||||||+||||+.+|.+||
T Consensus       445 ~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL  483 (674)
T 3pfq_A          445 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI  483 (674)
T ss_dssp             HHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEE
Confidence            346679999999999999999999999999999988775

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.02  E-value=8.2e-07  Score=81.36  Aligned_cols=39  Identities=36%  Similarity=0.600  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       123 ~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A          123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEE
Confidence            345567799999999999999999999999999887764

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.02  E-value=7.4e-07  Score=84.05  Aligned_cols=39  Identities=49%  Similarity=0.791  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       131 ~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl  169 (367)
T 1cm8_A          131 QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKI  169 (367)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEE
Confidence            345567899999999999999999999999999988774

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.02  E-value=4.8e-07  Score=83.21  Aligned_cols=40  Identities=25%  Similarity=0.360  Sum_probs=34.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       159 ~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl  198 (311)
T 3p1a_A          159 VWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKL  198 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEE
Confidence            3445667899999999999999999999999998887764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.01  E-value=6.5e-07  Score=81.26  Aligned_cols=38  Identities=39%  Similarity=0.612  Sum_probs=33.8

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       104 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  141 (288)
T 1ob3_A          104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI  141 (288)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEE
Confidence            34567799999999999999999999999999988764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.01  E-value=8.9e-07  Score=82.04  Aligned_cols=38  Identities=29%  Similarity=0.364  Sum_probs=33.8

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       125 ~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl  162 (327)
T 3a62_A          125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKL  162 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEE
Confidence            34567799999999999999999999999999888764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.01  E-value=8.1e-07  Score=81.69  Aligned_cols=38  Identities=42%  Similarity=0.570  Sum_probs=33.7

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       123 ~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl  160 (311)
T 3niz_A          123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKL  160 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEE
Confidence            34567799999999999999999999999999887764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.00  E-value=8.1e-07  Score=80.98  Aligned_cols=36  Identities=44%  Similarity=0.727  Sum_probs=32.2

Q ss_pred             chhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         360 QSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       360 ~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       143 ~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl  178 (298)
T 2zv2_A          143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKI  178 (298)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEE
Confidence            456699999999999999999999999999887764

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.00  E-value=7.4e-07  Score=84.91  Aligned_cols=40  Identities=43%  Similarity=0.586  Sum_probs=34.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeec-CCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVN-SNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~-~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+ .+|.+||
T Consensus       143 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL  183 (394)
T 4e7w_A          143 IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL  183 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEE
Confidence            344567889999999999999999999999999 6787764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.00  E-value=4.8e-07  Score=83.91  Aligned_cols=40  Identities=30%  Similarity=0.435  Sum_probs=34.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       119 ~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL  158 (327)
T 3lzb_A          119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI  158 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEE
Confidence            3445667899999999999999999999999998887664

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=97.99  E-value=8.9e-07  Score=81.63  Aligned_cols=38  Identities=42%  Similarity=0.616  Sum_probs=33.7

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       112 ~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  149 (317)
T 2pmi_A          112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKL  149 (317)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEE
Confidence            34557799999999999999999999999999988764

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.99  E-value=9.3e-07  Score=80.73  Aligned_cols=38  Identities=32%  Similarity=0.590  Sum_probs=33.6

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       120 ~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl  157 (297)
T 3fxz_A          120 AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKL  157 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEE
Confidence            34567799999999999999999999999999887764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=97.99  E-value=1.2e-06  Score=80.22  Aligned_cols=39  Identities=31%  Similarity=0.428  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       111 ~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl  149 (310)
T 3s95_A          111 VSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVV  149 (310)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEE
Confidence            345667799999999999999999999999999887764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=97.98  E-value=8.7e-07  Score=83.85  Aligned_cols=40  Identities=30%  Similarity=0.424  Sum_probs=35.2

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       215 ~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl  254 (377)
T 3cbl_A          215 LLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKI  254 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEE
Confidence            3445678899999999999999999999999999988774

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=97.98  E-value=9.4e-07  Score=84.95  Aligned_cols=40  Identities=45%  Similarity=0.656  Sum_probs=33.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCC-CcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN-CILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~-~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.+ +.+||
T Consensus       158 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl  198 (420)
T 1j1b_A          158 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL  198 (420)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEe
Confidence            34456788999999999999999999999999965 55554

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=97.97  E-value=8.8e-07  Score=82.00  Aligned_cols=40  Identities=28%  Similarity=0.407  Sum_probs=34.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       153 ~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl  192 (325)
T 3kul_A          153 LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKV  192 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEE
Confidence            3445667799999999999999999999999999887764

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=97.96  E-value=8.3e-07  Score=82.97  Aligned_cols=40  Identities=33%  Similarity=0.577  Sum_probs=34.9

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       126 ~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl  165 (351)
T 3mi9_A          126 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL  165 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEE
Confidence            3445667899999999999999999999999999887764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=97.96  E-value=1.1e-06  Score=87.40  Aligned_cols=39  Identities=28%  Similarity=0.448  Sum_probs=34.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       289 ~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL  327 (576)
T 2acx_A          289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRI  327 (576)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEE
Confidence            345678899999999999999999999999999988775

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=97.95  E-value=1e-06  Score=83.15  Aligned_cols=37  Identities=51%  Similarity=0.835  Sum_probs=33.2

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       137 i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL  173 (367)
T 2fst_X          137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI  173 (367)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEE
Confidence            4556799999999999999999999999999988764

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=97.94  E-value=1.2e-06  Score=81.04  Aligned_cols=39  Identities=38%  Similarity=0.554  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       103 ~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl  141 (324)
T 3mtl_A          103 KLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKL  141 (324)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEE
Confidence            345567899999999999999999999999999887764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=97.94  E-value=1.1e-06  Score=82.55  Aligned_cols=38  Identities=32%  Similarity=0.318  Sum_probs=33.7

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       163 ~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl  200 (355)
T 1vzo_A          163 IYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVL  200 (355)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEE
Confidence            34567799999999999999999999999999987764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=97.93  E-value=1.3e-06  Score=86.53  Aligned_cols=39  Identities=28%  Similarity=0.449  Sum_probs=34.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       292 ~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL  330 (543)
T 3c4z_A          292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI  330 (543)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEE
Confidence            345678899999999999999999999999999988774

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.93  E-value=1.3e-06  Score=78.19  Aligned_cols=40  Identities=23%  Similarity=0.380  Sum_probs=34.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.++.|||+.||+||||||+||||+.+|.++|
T Consensus       106 ~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l  145 (268)
T 3sxs_A          106 LLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKV  145 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEE
Confidence            3445667799999999999999999999999999887764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=97.93  E-value=1.1e-06  Score=85.13  Aligned_cols=39  Identities=28%  Similarity=0.414  Sum_probs=34.3

Q ss_pred             cCcchhhhhccccccc-CceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHS-ARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~-~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+ .||+||||||+||||+.+|.+||
T Consensus       251 ~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl  290 (446)
T 4ejn_A          251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKI  290 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEE
T ss_pred             HHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEE
Confidence            3455678999999998 99999999999999999988764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=97.93  E-value=1.3e-06  Score=81.45  Aligned_cols=39  Identities=33%  Similarity=0.522  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       111 ~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  149 (336)
T 3h4j_B          111 RRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKI  149 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEE
Confidence            345567799999999999999999999999999987764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=97.93  E-value=1.1e-06  Score=81.04  Aligned_cols=40  Identities=18%  Similarity=0.273  Sum_probs=34.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       139 ~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl  178 (323)
T 3qup_A          139 LVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCV  178 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEE
Confidence            3445667899999999999999999999999999887764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=97.93  E-value=1.4e-06  Score=83.24  Aligned_cols=39  Identities=46%  Similarity=0.652  Sum_probs=33.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecC---CCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNS---NCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~---~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.   +|.+||
T Consensus       164 ~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl  205 (400)
T 1nxk_A          164 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL  205 (400)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEE
Confidence            345667799999999999999999999999997   566664

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=97.93  E-value=1.4e-06  Score=79.31  Aligned_cols=39  Identities=31%  Similarity=0.333  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccc--------cCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLH--------SARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h--------~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||        +.||+||||||+||||+.+|.+||
T Consensus       108 ~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A          108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             HHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence            345567799999999        999999999999999999887764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=97.92  E-value=1.4e-06  Score=80.49  Aligned_cols=37  Identities=41%  Similarity=0.522  Sum_probs=32.8

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       110 i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl  146 (323)
T 3tki_A          110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKI  146 (323)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEE
Confidence            4456699999999999999999999999999887764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.92  E-value=7.6e-07  Score=81.01  Aligned_cols=39  Identities=31%  Similarity=0.508  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       117 ~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl  155 (295)
T 3ugc_A          117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI  155 (295)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEE
Confidence            445667899999999999999999999999998887664

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=97.92  E-value=9.6e-07  Score=83.49  Aligned_cols=39  Identities=26%  Similarity=0.416  Sum_probs=34.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       195 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL  233 (373)
T 3c1x_A          195 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV  233 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEE
Confidence            445668899999999999999999999999999988764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=97.92  E-value=1.2e-06  Score=79.76  Aligned_cols=39  Identities=46%  Similarity=0.674  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||||+||||+.+|.+||
T Consensus       114 ~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl  152 (294)
T 4eqm_A          114 INFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKI  152 (294)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence            445567799999999999999999999999999887764

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=97.91  E-value=9.8e-07  Score=80.25  Aligned_cols=39  Identities=21%  Similarity=0.407  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       127 ~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl  165 (298)
T 3pls_A          127 ISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKV  165 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEe
Confidence            345567899999999999999999999999999987764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=97.91  E-value=1.3e-06  Score=80.99  Aligned_cols=37  Identities=24%  Similarity=0.456  Sum_probs=32.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.+|.
T Consensus       107 ~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~  143 (330)
T 2izr_A          107 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN  143 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCC
Confidence            3445667899999999999999999999999998765

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=97.90  E-value=1.3e-06  Score=81.46  Aligned_cols=40  Identities=43%  Similarity=0.664  Sum_probs=35.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       114 ~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl  153 (346)
T 1ua2_A          114 IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKL  153 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEE
Confidence            4456677899999999999999999999999999988764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=97.90  E-value=1.6e-06  Score=80.72  Aligned_cols=38  Identities=26%  Similarity=0.429  Sum_probs=33.7

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       134 ~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL  171 (335)
T 3dls_A          134 YIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKL  171 (335)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEE
Confidence            34567799999999999999999999999999887764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=97.90  E-value=7.3e-07  Score=83.53  Aligned_cols=38  Identities=24%  Similarity=0.421  Sum_probs=33.0

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       197 ~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl  234 (359)
T 3vhe_A          197 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI  234 (359)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEE
Confidence            34557799999999999999999999999998877664

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=97.90  E-value=1.7e-06  Score=80.12  Aligned_cols=38  Identities=29%  Similarity=0.454  Sum_probs=33.7

Q ss_pred             CcchhhhhcccccccC---------ceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSA---------RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~---------~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||+.         ||+||||||+||||+.+|.+||
T Consensus       115 ~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A          115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             HHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence            3456779999999999         9999999999999999887764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.90  E-value=2.2e-06  Score=78.97  Aligned_cols=37  Identities=38%  Similarity=0.577  Sum_probs=32.7

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       144 i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl  180 (321)
T 2qkw_B          144 ICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKI  180 (321)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEE
T ss_pred             HHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEE
Confidence            3456689999999999999999999999999887764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=97.89  E-value=1.1e-06  Score=79.90  Aligned_cols=39  Identities=28%  Similarity=0.439  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       131 ~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl  169 (298)
T 3f66_A          131 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV  169 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEE
Confidence            345567899999999999999999999999999887764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=97.89  E-value=1.1e-06  Score=79.39  Aligned_cols=39  Identities=41%  Similarity=0.480  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       119 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  157 (281)
T 1mp8_A          119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL  157 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEE
Confidence            345667899999999999999999999999998887664

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=97.89  E-value=1.7e-06  Score=80.59  Aligned_cols=38  Identities=24%  Similarity=0.340  Sum_probs=33.4

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       176 ~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL  213 (344)
T 1rjb_A          176 CFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKI  213 (344)
T ss_dssp             HHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEe
Confidence            34567799999999999999999999999999887764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=97.89  E-value=1.8e-06  Score=81.19  Aligned_cols=39  Identities=49%  Similarity=0.786  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       131 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl  169 (364)
T 3qyz_A          131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI  169 (364)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEE
Confidence            345667899999999999999999999999999987764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=97.88  E-value=1.5e-06  Score=81.99  Aligned_cols=38  Identities=45%  Similarity=0.688  Sum_probs=34.0

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       131 ~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  168 (371)
T 2xrw_A          131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  168 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEE
Confidence            45567899999999999999999999999999988764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=97.88  E-value=1.3e-06  Score=78.90  Aligned_cols=39  Identities=31%  Similarity=0.514  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||||+||||+.+|.+||
T Consensus       123 ~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl  161 (283)
T 3gen_A          123 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV  161 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEE
Confidence            445667799999999999999999999999999887764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=97.88  E-value=1.6e-06  Score=79.40  Aligned_cols=37  Identities=24%  Similarity=0.399  Sum_probs=32.7

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       155 i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl  191 (314)
T 2ivs_A          155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI  191 (314)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEE
Confidence            4456799999999999999999999999999887664

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=97.88  E-value=1.8e-06  Score=81.76  Aligned_cols=40  Identities=43%  Similarity=0.571  Sum_probs=34.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeec-CCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVN-SNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~-~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+ .+|.+||
T Consensus       143 ~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl  183 (383)
T 3eb0_A          143 ISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKL  183 (383)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEE
Confidence            445677889999999999999999999999997 5676664

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=97.88  E-value=1.6e-06  Score=84.27  Aligned_cols=40  Identities=20%  Similarity=0.445  Sum_probs=35.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       286 ~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl  325 (454)
T 1qcf_A          286 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI  325 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEE
Confidence            3446678899999999999999999999999999988774

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=97.88  E-value=1.6e-06  Score=78.60  Aligned_cols=39  Identities=26%  Similarity=0.559  Sum_probs=32.8

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeee---cCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLV---NSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~---~~~~~~k~  395 (395)
                      ..++.|++.|+.|||++||+||||||+||||   +.++.+||
T Consensus       108 ~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL  149 (296)
T 4hgt_A          108 LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI  149 (296)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEE
Confidence            3455677999999999999999999999999   66666653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=97.88  E-value=1.9e-06  Score=79.60  Aligned_cols=38  Identities=29%  Similarity=0.488  Sum_probs=32.3

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecC--CCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNS--NCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~--~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.  ++.+||
T Consensus       106 ~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl  145 (321)
T 1tki_A          106 SYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKI  145 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEE
Confidence            34567799999999999999999999999987  566653

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=97.88  E-value=2.1e-06  Score=78.06  Aligned_cols=37  Identities=22%  Similarity=0.387  Sum_probs=31.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.
T Consensus       108 ~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~  144 (298)
T 1csn_A          108 VAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS  144 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCC
Confidence            3445667799999999999999999999999987654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=97.87  E-value=1.3e-06  Score=79.54  Aligned_cols=39  Identities=31%  Similarity=0.455  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||||+||||+.+|.++|
T Consensus       129 ~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl  167 (302)
T 4e5w_A          129 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI  167 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEE
Confidence            445667899999999999999999999999998887664

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=97.87  E-value=1.7e-06  Score=82.05  Aligned_cols=39  Identities=26%  Similarity=0.507  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       194 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL  232 (382)
T 3tt0_A          194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI  232 (382)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEE
Confidence            344567799999999999999999999999999888764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=97.87  E-value=2e-06  Score=80.63  Aligned_cols=33  Identities=30%  Similarity=0.500  Sum_probs=29.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.
T Consensus       140 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  172 (360)
T 3llt_A          140 KLYCIEILKALNYLRKMSLTHTDLKPENILLDD  172 (360)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcc
Confidence            335567799999999999999999999999975

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=97.87  E-value=1.7e-06  Score=82.71  Aligned_cols=40  Identities=33%  Similarity=0.537  Sum_probs=33.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeee----cCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLV----NSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~----~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||    +.+|.+||
T Consensus       130 ~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A          130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence            34456788999999999999999999999999    55666664

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=97.87  E-value=1.7e-06  Score=81.74  Aligned_cols=39  Identities=31%  Similarity=0.479  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       150 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl  188 (373)
T 2qol_A          150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV  188 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEE
Confidence            445667899999999999999999999999999988764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=97.87  E-value=1.6e-06  Score=79.62  Aligned_cols=39  Identities=31%  Similarity=0.601  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||++||+||||||+||||+.+|.+||
T Consensus       119 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl  157 (311)
T 3ork_A          119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKV  157 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEE
Confidence            445667799999999999999999999999999887764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=97.87  E-value=2.1e-06  Score=80.20  Aligned_cols=39  Identities=44%  Similarity=0.712  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       115 ~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl  153 (353)
T 2b9h_A          115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV  153 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEE
Confidence            345667799999999999999999999999999887764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=97.86  E-value=1.3e-06  Score=80.40  Aligned_cols=40  Identities=23%  Similarity=0.423  Sum_probs=35.2

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       140 ~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl  179 (322)
T 1p4o_A          140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI  179 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEE
Confidence            3456678899999999999999999999999999887764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=97.86  E-value=1.9e-06  Score=79.09  Aligned_cols=39  Identities=18%  Similarity=0.307  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       150 ~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl  188 (313)
T 3brb_A          150 LKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCV  188 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEE
Confidence            345567799999999999999999999999999887764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=97.86  E-value=2.3e-06  Score=77.10  Aligned_cols=39  Identities=44%  Similarity=0.594  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||+|+||||+.+|.++|
T Consensus       112 ~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l  150 (279)
T 3fdn_A          112 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI  150 (279)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEE
Confidence            345567799999999999999999999999999887764

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=97.86  E-value=2.1e-06  Score=79.30  Aligned_cols=38  Identities=32%  Similarity=0.561  Sum_probs=33.6

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       145 ~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl  182 (321)
T 2c30_A          145 TVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKL  182 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEE
Confidence            34567799999999999999999999999999887764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=97.85  E-value=2.4e-06  Score=83.38  Aligned_cols=38  Identities=26%  Similarity=0.479  Sum_probs=33.6

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       120 ~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL  157 (476)
T 2y94_A          120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKI  157 (476)
T ss_dssp             HHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEE
Confidence            34567799999999999999999999999999887764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=97.85  E-value=2.2e-06  Score=83.13  Aligned_cols=40  Identities=23%  Similarity=0.428  Sum_probs=35.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       291 ~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl  330 (450)
T 1k9a_A          291 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV  330 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEE
Confidence            4556778899999999999999999999999999988774

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=97.85  E-value=1.7e-06  Score=80.90  Aligned_cols=39  Identities=36%  Similarity=0.670  Sum_probs=34.4

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       157 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL  195 (348)
T 1u5q_A          157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL  195 (348)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEE
Confidence            345667799999999999999999999999999887764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=97.85  E-value=1.8e-06  Score=83.17  Aligned_cols=40  Identities=30%  Similarity=0.468  Sum_probs=34.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCc--ccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI--LKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~--~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.+|.  +||
T Consensus       202 ~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL  243 (429)
T 3kvw_A          202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV  243 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEE
Confidence            4456678899999999999999999999999999876  553

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=97.84  E-value=2.4e-06  Score=78.30  Aligned_cols=39  Identities=23%  Similarity=0.547  Sum_probs=33.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       105 ~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl  143 (311)
T 4agu_A          105 KSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKL  143 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEE
Confidence            344567799999999999999999999999999887764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=97.84  E-value=2.1e-06  Score=79.28  Aligned_cols=36  Identities=36%  Similarity=0.641  Sum_probs=31.4

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCC-ccc
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC-ILK  394 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~-~~k  394 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.++ .+|
T Consensus       135 ~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~k  171 (330)
T 3nsz_A          135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR  171 (330)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEE
T ss_pred             HHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEE
Confidence            456779999999999999999999999999776 555

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=97.84  E-value=1.5e-06  Score=81.89  Aligned_cols=35  Identities=23%  Similarity=0.350  Sum_probs=31.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|
T Consensus       184 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~  218 (367)
T 3l9p_A          184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG  218 (367)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC
Confidence            44667889999999999999999999999999654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=97.84  E-value=1.5e-06  Score=80.80  Aligned_cols=38  Identities=26%  Similarity=0.425  Sum_probs=33.3

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       178 ~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl  215 (343)
T 1luf_A          178 CIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKI  215 (343)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEE
Confidence            34567799999999999999999999999998877664

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.83  E-value=1.3e-06  Score=78.39  Aligned_cols=39  Identities=28%  Similarity=0.455  Sum_probs=33.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||||+||||+.+|.+||
T Consensus       109 ~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl  147 (269)
T 4hcu_A          109 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV  147 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEe
Confidence            345567799999999999999999999999998877653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=97.83  E-value=2.5e-06  Score=76.87  Aligned_cols=39  Identities=18%  Similarity=0.417  Sum_probs=33.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       112 ~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl  150 (279)
T 1qpc_A          112 LDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI  150 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEE
Confidence            345567799999999999999999999999999887764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=97.83  E-value=2.8e-06  Score=78.68  Aligned_cols=39  Identities=31%  Similarity=0.389  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccC--------ceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSA--------RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~--------~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.        ||+||||||+||||+.+|.+||
T Consensus       137 ~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl  183 (337)
T 3mdy_A          137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI  183 (337)
T ss_dssp             HHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence            44566779999999998        9999999999999999887764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=97.83  E-value=1.7e-06  Score=80.13  Aligned_cols=40  Identities=23%  Similarity=0.399  Sum_probs=34.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.+|.+||
T Consensus       166 ~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  205 (333)
T 2i1m_A          166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI  205 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEB
T ss_pred             HHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEE
Confidence            3445678899999999999999999999999998877664

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=97.83  E-value=1.9e-06  Score=78.14  Aligned_cols=38  Identities=26%  Similarity=0.578  Sum_probs=33.5

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.++.|||+.||+||||||+||||+.+|.+||
T Consensus       124 ~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl  161 (289)
T 3og7_A          124 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI  161 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEE
Confidence            44567799999999999999999999999999887764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=97.83  E-value=1.6e-06  Score=78.54  Aligned_cols=36  Identities=11%  Similarity=0.254  Sum_probs=31.8

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.++.
T Consensus       116 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~  151 (289)
T 4fvq_A          116 LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREED  151 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCB
T ss_pred             HHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCc
Confidence            345667899999999999999999999999988775

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=97.82  E-value=2.9e-06  Score=78.33  Aligned_cols=39  Identities=33%  Similarity=0.443  Sum_probs=33.6

Q ss_pred             cCcchhhhhcccccccC----------ceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSA----------RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~----------~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.          ||+||||||+||||+.+|.+||
T Consensus       124 ~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL  172 (322)
T 3soc_A          124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI  172 (322)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence            34556778999999998          9999999999999999988764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=97.82  E-value=2.6e-06  Score=77.67  Aligned_cols=39  Identities=46%  Similarity=0.652  Sum_probs=32.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecC---CCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNS---NCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~---~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.   ++.+||
T Consensus       120 ~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl  161 (299)
T 3m2w_A          120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL  161 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEE
Confidence            345567799999999999999999999999998   565553

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=97.82  E-value=2.1e-06  Score=83.92  Aligned_cols=40  Identities=28%  Similarity=0.480  Sum_probs=33.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeee---cCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLV---NSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~---~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.|||||||||+||||   +..+.+||
T Consensus       105 ~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL  147 (483)
T 3sv0_A          105 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYI  147 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEE
Confidence            34456778999999999999999999999999   46666654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=97.82  E-value=2.6e-06  Score=79.77  Aligned_cols=35  Identities=31%  Similarity=0.554  Sum_probs=30.4

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ..++.|++.||.|||++||+||||||+||||+.++
T Consensus       133 ~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~  167 (351)
T 3c0i_A          133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE  167 (351)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC
Confidence            34556779999999999999999999999998654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=97.82  E-value=1.6e-06  Score=78.25  Aligned_cols=39  Identities=33%  Similarity=0.394  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       116 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  154 (281)
T 3cc6_A          116 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKL  154 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEe
Confidence            445667899999999999999999999999998887654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=97.81  E-value=2.1e-06  Score=84.38  Aligned_cols=39  Identities=23%  Similarity=0.431  Sum_probs=34.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       321 ~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl  359 (495)
T 1opk_A          321 LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKV  359 (495)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEE
Confidence            445679999999999999999999999999998887764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=97.81  E-value=2.8e-06  Score=78.75  Aligned_cols=38  Identities=29%  Similarity=0.499  Sum_probs=33.3

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       161 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL  198 (334)
T 2pvf_A          161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI  198 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEE
Confidence            34557799999999999999999999999999887764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=97.81  E-value=3.3e-06  Score=81.65  Aligned_cols=38  Identities=26%  Similarity=0.446  Sum_probs=31.7

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecC---CCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNS---NCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~---~~~~k~  395 (395)
                      .++.|++.|+.|||++||+||||||+||||+.   ++.+||
T Consensus       114 ~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL  154 (444)
T 3soa_A          114 HCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKL  154 (444)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEE
Confidence            34567799999999999999999999999984   455553

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=97.81  E-value=2.5e-06  Score=80.05  Aligned_cols=39  Identities=31%  Similarity=0.459  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       137 ~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  175 (362)
T 3pg1_A          137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI  175 (362)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEE
Confidence            345667799999999999999999999999998887764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=97.81  E-value=2.5e-06  Score=79.79  Aligned_cols=37  Identities=54%  Similarity=0.876  Sum_probs=32.9

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       131 i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl  167 (353)
T 3coi_A          131 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKI  167 (353)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEE
Confidence            4456799999999999999999999999999987764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=97.81  E-value=3e-06  Score=77.46  Aligned_cols=38  Identities=29%  Similarity=0.497  Sum_probs=33.5

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       137 ~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl  174 (307)
T 2nru_A          137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI  174 (307)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEE
Confidence            45567799999999999999999999999999887764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=97.81  E-value=2.1e-06  Score=79.42  Aligned_cols=40  Identities=35%  Similarity=0.479  Sum_probs=34.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.++.|||+.||+||||||+||||+.+|.+||
T Consensus       129 ~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl  168 (327)
T 3lxl_A          129 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKI  168 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEE
Confidence            3445567799999999999999999999999998887764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=97.81  E-value=2.9e-06  Score=77.38  Aligned_cols=38  Identities=45%  Similarity=0.691  Sum_probs=33.5

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       113 ~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl  150 (305)
T 2wtk_C          113 GYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKI  150 (305)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEe
Confidence            34567799999999999999999999999998887764

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=97.81  E-value=2.7e-06  Score=79.39  Aligned_cols=40  Identities=25%  Similarity=0.399  Sum_probs=33.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCC--cccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC--ILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~--~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||||+||||+.++  .+||
T Consensus       153 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL  194 (345)
T 2v62_A          153 VLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYL  194 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEE
Confidence            344566779999999999999999999999998776  5553

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=97.80  E-value=2.1e-06  Score=77.67  Aligned_cols=39  Identities=28%  Similarity=0.451  Sum_probs=33.8

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||+|+||||+.+|.+||
T Consensus       124 ~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl  162 (291)
T 1u46_A          124 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKI  162 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEE
Confidence            345567799999999999999999999999998887654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=97.80  E-value=3e-06  Score=79.69  Aligned_cols=35  Identities=26%  Similarity=0.492  Sum_probs=30.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.++
T Consensus       118 ~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~  152 (361)
T 2yab_A          118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN  152 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC
Confidence            33456779999999999999999999999998776

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=97.80  E-value=2.6e-06  Score=80.37  Aligned_cols=38  Identities=53%  Similarity=0.841  Sum_probs=33.6

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       148 ~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL  185 (371)
T 4exu_A          148 YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKI  185 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEE
Confidence            34567799999999999999999999999999987764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=97.80  E-value=2.9e-06  Score=77.96  Aligned_cols=38  Identities=34%  Similarity=0.550  Sum_probs=33.7

Q ss_pred             CcchhhhhcccccccCc--eEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSAR--ILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~--~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.|  |+||||||+||||+.+|.+||
T Consensus       141 ~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL  180 (309)
T 3p86_A          141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV  180 (309)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEE
Confidence            34567799999999999  999999999999999987764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=97.80  E-value=3.2e-06  Score=76.10  Aligned_cols=39  Identities=36%  Similarity=0.478  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||+|+||+|+.+|.+||
T Consensus       115 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl  153 (278)
T 3cok_A          115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKI  153 (278)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEE
Confidence            345567799999999999999999999999999887764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=97.80  E-value=2.2e-06  Score=79.17  Aligned_cols=40  Identities=25%  Similarity=0.488  Sum_probs=34.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       144 ~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL  183 (327)
T 1fvr_A          144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  183 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEE
Confidence            3445677899999999999999999999999998877664

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=97.79  E-value=2.3e-06  Score=79.77  Aligned_cols=36  Identities=28%  Similarity=0.515  Sum_probs=30.6

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCccc
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK  394 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k  394 (395)
                      .++.|++.||.|||+.||+||||||+||||+. |.+|
T Consensus       112 ~i~~qi~~al~~lH~~~iiHrDikp~NIll~~-~~~k  147 (343)
T 3dbq_A          112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLK  147 (343)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEE
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCcceEEEEC-CcEE
Confidence            44567799999999999999999999999974 5554

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.78  E-value=3.3e-06  Score=77.52  Aligned_cols=40  Identities=23%  Similarity=0.312  Sum_probs=34.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       136 ~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl  175 (317)
T 2buj_A          136 ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVL  175 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEE
Confidence            3445677899999999999999999999999998887664

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=97.78  E-value=2.7e-06  Score=80.02  Aligned_cols=36  Identities=28%  Similarity=0.328  Sum_probs=31.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      ..++.|++.|+.|||++||+||||||+||||+.++.
T Consensus       119 ~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~  154 (361)
T 3uc3_A          119 RFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA  154 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSS
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC
Confidence            345567799999999999999999999999987754

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=97.78  E-value=2.4e-06  Score=77.34  Aligned_cols=40  Identities=35%  Similarity=0.506  Sum_probs=34.6

Q ss_pred             ccCcchhhhhcccccccC-ceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~-~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+. ||+||||||+||||+.+|.+||
T Consensus       111 ~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl  151 (290)
T 3fme_A          111 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM  151 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEB
T ss_pred             HHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEE
Confidence            344566779999999998 9999999999999999887764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.78  E-value=2.6e-06  Score=79.11  Aligned_cols=40  Identities=33%  Similarity=0.463  Sum_probs=34.9

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       149 ~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl  188 (333)
T 1mqb_A          149 LVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKV  188 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEE
Confidence            3445677899999999999999999999999999887764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.78  E-value=3.4e-06  Score=77.97  Aligned_cols=40  Identities=25%  Similarity=0.472  Sum_probs=35.0

Q ss_pred             ccCcchhhhhcccccccCc--eEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSAR--ILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~--~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.|  |+||||||+||||+.+|.+||
T Consensus       138 ~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl  179 (337)
T 3ll6_A          138 VLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL  179 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEE
Confidence            4455678899999999999  999999999999999887764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=97.78  E-value=2.6e-06  Score=78.02  Aligned_cols=38  Identities=26%  Similarity=0.380  Sum_probs=33.3

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       149 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  186 (313)
T 1t46_A          149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI  186 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEE
Confidence            34567799999999999999999999999999887764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=97.77  E-value=3.6e-06  Score=79.25  Aligned_cols=40  Identities=28%  Similarity=0.595  Sum_probs=34.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.||+||||+|+||||+.+|.++|
T Consensus       202 ~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl  241 (365)
T 2y7j_A          202 TRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRL  241 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEE
Confidence            3445667799999999999999999999999999988764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=97.77  E-value=3e-06  Score=76.99  Aligned_cols=38  Identities=32%  Similarity=0.577  Sum_probs=33.6

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       120 ~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl  157 (303)
T 1zy4_A          120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKI  157 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEE
Confidence            34567799999999999999999999999999887764

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=97.77  E-value=4e-06  Score=75.73  Aligned_cols=39  Identities=36%  Similarity=0.523  Sum_probs=33.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||+|+.+|.++|
T Consensus       117 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  155 (284)
T 2vgo_A          117 ATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKI  155 (284)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEE
Confidence            345567799999999999999999999999998887764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=97.77  E-value=2.2e-06  Score=78.61  Aligned_cols=37  Identities=24%  Similarity=0.449  Sum_probs=32.4

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       153 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl  189 (316)
T 2xir_A          153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI  189 (316)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEE
Confidence            4456799999999999999999999999998877654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=97.77  E-value=3.6e-06  Score=77.86  Aligned_cols=34  Identities=29%  Similarity=0.472  Sum_probs=30.5

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|
T Consensus       118 ~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~  151 (326)
T 2y0a_A          118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN  151 (326)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC
Confidence            3456779999999999999999999999998876

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=97.77  E-value=3.8e-06  Score=78.22  Aligned_cols=32  Identities=28%  Similarity=0.525  Sum_probs=28.4

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeec
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVN  388 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~  388 (395)
                      ..++.|++.||.|||+.||+||||||+||||+
T Consensus       126 ~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~  157 (355)
T 2eu9_A          126 RHMAYQLCHALRFLHENQLTHTDLKPENILFV  157 (355)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCCGGGEEES
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe
Confidence            34556779999999999999999999999994

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.77  E-value=5.1e-06  Score=74.20  Aligned_cols=32  Identities=19%  Similarity=0.264  Sum_probs=28.5

Q ss_pred             Ccchhhhhcccccc-cCceEecCCCCCCeeecC
Q psy2865         358 NPQSAAFKSLKYLH-SARILHRDIKPGNLLVNS  389 (395)
Q Consensus       358 ~~~~qi~~gl~y~h-~~~~~hr~~~~~n~~~~~  389 (395)
                      .++.|++.++.||| +.||+||||||+||||+.
T Consensus       174 ~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~  206 (258)
T 1zth_A          174 GIFNDVVENVKRLYQEAELVHADLSEYNIMYID  206 (258)
T ss_dssp             HHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS
T ss_pred             HHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC
Confidence            34556799999999 999999999999999987

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=97.76  E-value=3.4e-06  Score=76.57  Aligned_cols=39  Identities=26%  Similarity=0.555  Sum_probs=32.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeec---CCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVN---SNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~---~~~~~k~  395 (395)
                      ..++.|++.|+.|||++||+||||||+||||+   .++.+||
T Consensus       108 ~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl  149 (296)
T 3uzp_A          108 LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI  149 (296)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEE
Confidence            34556779999999999999999999999994   5666553

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.76  E-value=3.3e-06  Score=80.28  Aligned_cols=37  Identities=27%  Similarity=0.495  Sum_probs=31.1

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||+. |.+||
T Consensus       159 ~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~-~~~kl  195 (390)
T 2zmd_A          159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKL  195 (390)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS-SCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC-CeEEE
Confidence            45567799999999999999999999999964 55553

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=97.76  E-value=3.1e-06  Score=76.20  Aligned_cols=39  Identities=23%  Similarity=0.451  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||+|+|||++.+|.++|
T Consensus       120 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l  158 (278)
T 1byg_A          120 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV  158 (278)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEE
Confidence            345567799999999999999999999999999887764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=97.76  E-value=3.1e-06  Score=76.93  Aligned_cols=39  Identities=38%  Similarity=0.614  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||+|+.+|.+||
T Consensus       106 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl  144 (299)
T 2r3i_A          106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL  144 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEE
Confidence            345567799999999999999999999999999887764

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=97.76  E-value=3.9e-06  Score=77.54  Aligned_cols=33  Identities=33%  Similarity=0.572  Sum_probs=29.4

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN  390 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~  390 (395)
                      .++.|++.||.|||++||+||||||+||||+..
T Consensus       122 ~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  154 (339)
T 1z57_A          122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQS  154 (339)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESCC
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecc
Confidence            455677999999999999999999999999873

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=97.76  E-value=3.4e-06  Score=77.79  Aligned_cols=39  Identities=28%  Similarity=0.405  Sum_probs=33.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeec-CCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVN-SNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~-~~~~~k~  395 (395)
                      ..++.|++.||.|||+.||+||||||+||||+ .+|.+||
T Consensus       152 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL  191 (320)
T 3a99_A          152 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL  191 (320)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEE
Confidence            34556779999999999999999999999998 6676664

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=97.76  E-value=3.3e-06  Score=77.86  Aligned_cols=39  Identities=38%  Similarity=0.643  Sum_probs=33.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       123 ~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl  161 (326)
T 1blx_A          123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL  161 (326)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEE
Confidence            334567799999999999999999999999999887764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=97.76  E-value=2.9e-06  Score=76.42  Aligned_cols=39  Identities=26%  Similarity=0.520  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       125 ~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  163 (284)
T 2a19_B          125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKI  163 (284)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEE
Confidence            345667899999999999999999999999998887664

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=97.75  E-value=4e-06  Score=77.81  Aligned_cols=39  Identities=33%  Similarity=0.506  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||+|+||||+.+|.+||
T Consensus       144 ~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl  182 (335)
T 2owb_A          144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI  182 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEE
Confidence            345567799999999999999999999999999887764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=97.75  E-value=3.2e-06  Score=77.84  Aligned_cols=39  Identities=26%  Similarity=0.488  Sum_probs=32.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeee----cCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLV----NSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~----~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||    +..+.+||
T Consensus       115 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL  157 (319)
T 4euu_A          115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKL  157 (319)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEE
Confidence            3455677999999999999999999999998    66665553

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=97.75  E-value=2.6e-06  Score=86.24  Aligned_cols=39  Identities=26%  Similarity=0.397  Sum_probs=34.8

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       472 ~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL  510 (635)
T 4fl3_A          472 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKI  510 (635)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEE
Confidence            446669999999999999999999999999999887764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=97.75  E-value=3.3e-06  Score=78.17  Aligned_cols=39  Identities=33%  Similarity=0.541  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       127 ~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl  165 (331)
T 4aaa_A          127 QKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKL  165 (331)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEE
Confidence            345567799999999999999999999999999887764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.75  E-value=2.2e-06  Score=76.60  Aligned_cols=40  Identities=28%  Similarity=0.431  Sum_probs=34.2

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.++.|||+.|++||||+|+||+|+.+|.+||
T Consensus       106 ~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl  145 (267)
T 3t9t_A          106 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV  145 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEE
Confidence            3445667899999999999999999999999998877653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=97.74  E-value=4.3e-06  Score=75.89  Aligned_cols=39  Identities=33%  Similarity=0.506  Sum_probs=33.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       118 ~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  156 (294)
T 2rku_A          118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI  156 (294)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEE
Confidence            344567799999999999999999999999999887764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=97.74  E-value=4.3e-06  Score=76.99  Aligned_cols=38  Identities=24%  Similarity=0.478  Sum_probs=33.5

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.++.|||+.||+||||||+||||+.+|.+||
T Consensus       138 ~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl  175 (318)
T 3lxp_A          138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKI  175 (318)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEE
Confidence            34567799999999999999999999999999987764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=97.74  E-value=3.4e-06  Score=79.89  Aligned_cols=35  Identities=40%  Similarity=0.674  Sum_probs=30.8

Q ss_pred             cCcchhhhhcccccccC-ceEecCCCCCCeeecCCC
Q psy2865         357 INPQSAAFKSLKYLHSA-RILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~-~~~hr~~~~~n~~~~~~~  391 (395)
                      ..++.|++.||.|||++ ||+||||||+||||+.+|
T Consensus       149 ~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          149 KKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            34566779999999998 999999999999999775

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=97.74  E-value=3.3e-06  Score=76.63  Aligned_cols=39  Identities=26%  Similarity=0.397  Sum_probs=33.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       120 ~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl  158 (291)
T 1xbb_A          120 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKI  158 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEE
Confidence            345667799999999999999999999999998887653

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=97.74  E-value=4.2e-06  Score=75.37  Aligned_cols=36  Identities=28%  Similarity=0.527  Sum_probs=29.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|
T Consensus       117 ~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~  152 (289)
T 1x8b_A          117 LKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTS  152 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             HHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCC
Confidence            344567789999999999999999999999998654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=97.74  E-value=2.7e-06  Score=82.54  Aligned_cols=40  Identities=23%  Similarity=0.444  Sum_probs=35.0

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.++.+||
T Consensus       282 ~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl  321 (452)
T 1fmk_A          282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV  321 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEE
Confidence            3456678899999999999999999999999998877764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.74  E-value=4.4e-06  Score=77.03  Aligned_cols=39  Identities=28%  Similarity=0.477  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccC---ceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSA---RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~---~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.   ||+||||||+||||+.+|.+||
T Consensus       134 ~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl  175 (326)
T 3uim_A          134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV  175 (326)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence            34556779999999999   9999999999999999887764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=97.74  E-value=3.7e-06  Score=76.53  Aligned_cols=40  Identities=28%  Similarity=0.518  Sum_probs=34.9

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       123 ~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  162 (303)
T 2vwi_A          123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI  162 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEE
Confidence            3445668899999999999999999999999999887764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=97.74  E-value=3e-06  Score=79.27  Aligned_cols=39  Identities=15%  Similarity=0.405  Sum_probs=33.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCC--ccc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC--ILK  394 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~--~~k  394 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|  .+|
T Consensus       161 ~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~k  201 (352)
T 2jii_A          161 VLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVT  201 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEE
Confidence            445567889999999999999999999999999887  554

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=97.73  E-value=4.5e-06  Score=74.91  Aligned_cols=37  Identities=41%  Similarity=0.522  Sum_probs=32.6

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.++.|||+.|++||||+|+||+|+.+|.+||
T Consensus       110 ~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  146 (276)
T 2yex_A          110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKI  146 (276)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEE
Confidence            4456799999999999999999999999999887664

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=97.73  E-value=3.8e-06  Score=77.07  Aligned_cols=35  Identities=31%  Similarity=0.479  Sum_probs=30.9

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.++.
T Consensus       115 ~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~  149 (316)
T 2ac3_A          115 VVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ  149 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS
T ss_pred             HHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC
Confidence            34567799999999999999999999999987754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=97.73  E-value=3.8e-06  Score=77.67  Aligned_cols=34  Identities=26%  Similarity=0.469  Sum_probs=28.9

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      .++.|++.|+.|||+.||+||||||+||||+..+
T Consensus       110 ~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~  143 (325)
T 3kn6_A          110 YIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN  143 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC--
T ss_pred             HHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC
Confidence            3456779999999999999999999999998764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=97.73  E-value=3e-06  Score=78.28  Aligned_cols=39  Identities=31%  Similarity=0.508  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       148 ~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL  186 (326)
T 2w1i_A          148 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI  186 (326)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEE
Confidence            445667899999999999999999999999998887664

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=97.73  E-value=2.2e-06  Score=85.05  Aligned_cols=40  Identities=23%  Similarity=0.444  Sum_probs=35.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.++.+||
T Consensus       365 ~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl  404 (535)
T 2h8h_A          365 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV  404 (535)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEE
Confidence            4456779999999999999999999999999998887764

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=97.73  E-value=3.9e-06  Score=74.98  Aligned_cols=40  Identities=8%  Similarity=0.279  Sum_probs=34.3

Q ss_pred             ccCcchhhhhcccccccCc--eEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSAR--ILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~--~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.|  |+||||||+||||+.+|.++|
T Consensus       113 ~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l  154 (271)
T 3kmu_A          113 AVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARI  154 (271)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeE
Confidence            3445667899999999999  999999999999999887653

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=97.72  E-value=3.8e-06  Score=77.80  Aligned_cols=33  Identities=36%  Similarity=0.558  Sum_probs=29.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.
T Consensus       135 ~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~  167 (329)
T 3gbz_A          135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSV  167 (329)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCEECCCCCHHHEEEec
Confidence            345667799999999999999999999999953

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=97.72  E-value=4.2e-06  Score=78.68  Aligned_cols=34  Identities=38%  Similarity=0.635  Sum_probs=29.7

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.++
T Consensus       132 ~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~  165 (362)
T 2bdw_A          132 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKA  165 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC
Confidence            3456779999999999999999999999998653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.71  E-value=3.7e-06  Score=76.08  Aligned_cols=38  Identities=24%  Similarity=0.350  Sum_probs=33.2

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.++.|||+.||+||||+|+||||+.+|.+||
T Consensus       114 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl  151 (287)
T 1u59_A          114 ELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKI  151 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEE
Confidence            34567799999999999999999999999998887654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=97.71  E-value=3.9e-06  Score=76.44  Aligned_cols=40  Identities=33%  Similarity=0.541  Sum_probs=34.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.|++||||+|+||||+.+|.+||
T Consensus       119 ~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  158 (302)
T 2j7t_A          119 IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRL  158 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEE
Confidence            3445667799999999999999999999999998887764

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.70  E-value=6.1e-06  Score=81.85  Aligned_cols=33  Identities=15%  Similarity=0.332  Sum_probs=30.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      ..++.|++.++.|||++||+||||||+||||+.
T Consensus       434 ~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~  466 (540)
T 3en9_A          434 LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK  466 (540)
T ss_dssp             THHHHHHHHHHHHHHHTTEECTTCCTTSEEESS
T ss_pred             HHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC
Confidence            346779999999999999999999999999987

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=97.70  E-value=4.6e-06  Score=76.89  Aligned_cols=39  Identities=31%  Similarity=0.469  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||||+.+|.+||
T Consensus       132 ~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl  170 (326)
T 2x7f_A          132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKL  170 (326)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEE
Confidence            345567799999999999999999999999998887764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.70  E-value=3.6e-06  Score=84.90  Aligned_cols=40  Identities=20%  Similarity=0.305  Sum_probs=35.2

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       438 ~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL  477 (613)
T 2ozo_A          438 VAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKI  477 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEE
Confidence            3446678999999999999999999999999999887764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=97.69  E-value=5.8e-06  Score=78.51  Aligned_cols=38  Identities=34%  Similarity=0.509  Sum_probs=31.4

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCC--CcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN--CILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~--~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||+..  +.+||
T Consensus       153 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL  192 (387)
T 1kob_A          153 NYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKI  192 (387)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEE
T ss_pred             HHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEE
Confidence            345677999999999999999999999999753  44553

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=97.69  E-value=2.8e-06  Score=76.78  Aligned_cols=39  Identities=26%  Similarity=0.452  Sum_probs=33.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||||+||+|+.+|.++|
T Consensus       114 ~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l  152 (288)
T 3kfa_A          114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV  152 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEE
Confidence            345567799999999999999999999999998877653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=97.68  E-value=5.9e-06  Score=76.81  Aligned_cols=36  Identities=44%  Similarity=0.685  Sum_probs=31.0

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCC--ccc
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC--ILK  394 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~--~~k  394 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.++  .+|
T Consensus       173 i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~k  210 (345)
T 3hko_A          173 IMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK  210 (345)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEE
T ss_pred             HHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEE
Confidence            445679999999999999999999999998776  454

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=97.68  E-value=5.7e-06  Score=78.15  Aligned_cols=38  Identities=26%  Similarity=0.368  Sum_probs=31.3

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeee--cCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLV--NSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~--~~~~~~k~  395 (395)
                      .++.|++.||.|||+.||+||||||+||||  +..+.+||
T Consensus       191 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl  230 (373)
T 2x4f_A          191 LFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKI  230 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEE
Confidence            345677999999999999999999999999  44555553

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=97.67  E-value=6.3e-06  Score=74.07  Aligned_cols=39  Identities=28%  Similarity=0.508  Sum_probs=32.4

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeee---cCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLV---NSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~---~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||||   +.++.++|
T Consensus       109 ~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l  150 (277)
T 3f3z_A          109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKL  150 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEE
Confidence            3445677999999999999999999999999   66666553

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=97.67  E-value=6.1e-06  Score=75.22  Aligned_cols=38  Identities=37%  Similarity=0.575  Sum_probs=33.4

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.++.|||+.||+||||+|+||||+.+|.++|
T Consensus       123 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  160 (303)
T 3a7i_A          123 TILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKL  160 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEE
Confidence            34567799999999999999999999999999887764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=97.67  E-value=6.4e-06  Score=74.84  Aligned_cols=39  Identities=31%  Similarity=0.496  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||+|+.+|.+||
T Consensus       127 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  165 (298)
T 1phk_A          127 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL  165 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEE
Confidence            345567799999999999999999999999999887764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.67  E-value=4.9e-06  Score=75.20  Aligned_cols=36  Identities=19%  Similarity=0.365  Sum_probs=31.3

Q ss_pred             cCcchhhhhcccccccCc--eEecCCCCCCeeecCCCc
Q psy2865         357 INPQSAAFKSLKYLHSAR--ILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~--~~hr~~~~~n~~~~~~~~  392 (395)
                      ..++.|++.|+.|||+.|  |+||||||+||||+.++.
T Consensus       125 ~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~  162 (287)
T 4f0f_A          125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE  162 (287)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT
T ss_pred             HHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC
Confidence            445667799999999999  999999999999987654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=97.67  E-value=4.6e-06  Score=80.44  Aligned_cols=35  Identities=37%  Similarity=0.601  Sum_probs=30.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ..++.|++.||.|||+.||+||||||+||||+..|
T Consensus       118 ~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~  152 (434)
T 2rio_A          118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS  152 (434)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCH
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChHhEEEecCc
Confidence            34667889999999999999999999999997643

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=97.67  E-value=6e-06  Score=77.22  Aligned_cols=39  Identities=41%  Similarity=0.508  Sum_probs=33.4

Q ss_pred             cCcchhhhhcccccc--cCceEecCCCCCCeeecC-CCcccC
Q psy2865         357 INPQSAAFKSLKYLH--SARILHRDIKPGNLLVNS-NCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h--~~~~~hr~~~~~n~~~~~-~~~~k~  395 (395)
                      ..++.|++.++.|||  +.||+||||||+||||+. +|.+||
T Consensus       132 ~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A          132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             HHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence            345667799999999  999999999999999997 677664

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=97.67  E-value=5e-06  Score=76.20  Aligned_cols=39  Identities=44%  Similarity=0.720  Sum_probs=32.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecC-CCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNS-NCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~-~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+. ++.+||
T Consensus       123 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl  162 (320)
T 2i6l_A          123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI  162 (320)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEE
Confidence            335567899999999999999999999999974 455553

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=97.67  E-value=6.6e-06  Score=76.31  Aligned_cols=39  Identities=33%  Similarity=0.384  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccc--------cCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLH--------SARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h--------~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||        +.||+||||||+||||+.+|.+||
T Consensus       142 ~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL  188 (342)
T 1b6c_B          142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  188 (342)
T ss_dssp             HHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEE
Confidence            445667899999999        899999999999999999887764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=97.66  E-value=6.2e-06  Score=76.25  Aligned_cols=37  Identities=32%  Similarity=0.487  Sum_probs=31.4

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecC---CCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNS---NCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~---~~~~k~  395 (395)
                      ++.|++.||.|||+.||+||||||+||||+.   .|.+||
T Consensus       136 i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL  175 (327)
T 3lm5_A          136 LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKI  175 (327)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred             HHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEE
Confidence            3456699999999999999999999999987   566553

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=97.66  E-value=9.2e-06  Score=78.30  Aligned_cols=33  Identities=39%  Similarity=0.594  Sum_probs=29.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      ..++.|++.||.|||+.||+||||||+||||+.
T Consensus       121 ~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~  153 (432)
T 3p23_A          121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISM  153 (432)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECC
T ss_pred             HHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEec
Confidence            456678899999999999999999999999954

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=97.65  E-value=6.9e-06  Score=75.65  Aligned_cols=34  Identities=26%  Similarity=0.513  Sum_probs=30.5

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      .++.|++.|+.|||+.||+||||+|+||||+.+|
T Consensus       119 ~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~  152 (321)
T 2a2a_A          119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN  152 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCChHHEEEecCC
Confidence            3456779999999999999999999999999877

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=97.65  E-value=5.8e-06  Score=78.70  Aligned_cols=38  Identities=26%  Similarity=0.476  Sum_probs=31.6

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeee----cCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLV----NSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~----~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||    +.++.+||
T Consensus       116 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL  157 (396)
T 4eut_A          116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKL  157 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEE
Confidence            345677999999999999999999999998    66655553

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=97.64  E-value=6.2e-06  Score=75.59  Aligned_cols=39  Identities=28%  Similarity=0.356  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.++.|||+.||+||||+|+||||+.+|.+||
T Consensus       137 ~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl  175 (309)
T 2h34_A          137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYL  175 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEE
Confidence            345667799999999999999999999999998887664

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=97.64  E-value=7.4e-06  Score=75.47  Aligned_cols=33  Identities=36%  Similarity=0.603  Sum_probs=29.4

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.++
T Consensus       119 ~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~  151 (322)
T 2ycf_A          119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE  151 (322)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC
Confidence            445779999999999999999999999998764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=97.64  E-value=7.6e-06  Score=74.95  Aligned_cols=39  Identities=41%  Similarity=0.625  Sum_probs=34.1

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.|++||||+|+||+|+.+|.+||
T Consensus       128 ~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  166 (314)
T 3com_A          128 ATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKL  166 (314)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEE
Confidence            345567799999999999999999999999999887764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=97.63  E-value=6.6e-06  Score=76.92  Aligned_cols=38  Identities=37%  Similarity=0.649  Sum_probs=31.9

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecC---CCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNS---NCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~---~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.   ++.+||
T Consensus       152 ~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl  192 (349)
T 2w4o_A          152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKI  192 (349)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEE
Confidence            34567799999999999999999999999975   566553

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.63  E-value=7.5e-06  Score=74.19  Aligned_cols=37  Identities=43%  Similarity=0.708  Sum_probs=32.1

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecC-CCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNS-NCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~-~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||+|+||||+. +|.+||
T Consensus       127 ~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl  164 (295)
T 2clq_A          127 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKI  164 (295)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEE
T ss_pred             HHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEE
Confidence            4567799999999999999999999999987 676653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=97.63  E-value=8.1e-06  Score=74.90  Aligned_cols=38  Identities=29%  Similarity=0.461  Sum_probs=30.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCccc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK  394 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k  394 (395)
                      +..++.|++.|+.|||+.||+||||+|+||||+ +|.++
T Consensus       132 ~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~  169 (319)
T 2y4i_B          132 TRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVV  169 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCE
T ss_pred             HHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEE
Confidence            344566779999999999999999999999998 44444

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=97.63  E-value=5.9e-06  Score=75.70  Aligned_cols=39  Identities=26%  Similarity=0.325  Sum_probs=33.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeec-CCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVN-SNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~-~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||+|+||||+ .+|.+||
T Consensus       142 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl  181 (312)
T 2iwi_A          142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKL  181 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEE
Confidence            44566789999999999999999999999998 6776653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=97.62  E-value=7.1e-06  Score=80.23  Aligned_cols=38  Identities=29%  Similarity=0.634  Sum_probs=31.5

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeec---CCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVN---SNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~---~~~~~k~  395 (395)
                      .++.|++.|+.|||++||+||||||+||||+   .++.+||
T Consensus       130 ~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl  170 (484)
T 3nyv_A          130 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI  170 (484)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEE
Confidence            3456779999999999999999999999994   4565553

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=97.62  E-value=5.4e-06  Score=74.42  Aligned_cols=38  Identities=26%  Similarity=0.485  Sum_probs=33.3

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||+|+||||+.+|.++|
T Consensus       115 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l  152 (276)
T 2h6d_A          115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKI  152 (276)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEE
Confidence            34567799999999999999999999999998887664

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=97.62  E-value=8.3e-06  Score=73.49  Aligned_cols=35  Identities=37%  Similarity=0.597  Sum_probs=30.1

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      .++.|++.|+.|||+.||+||||+|+||||+.++.
T Consensus       109 ~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~  143 (284)
T 3kk8_A          109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK  143 (284)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSST
T ss_pred             HHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCC
Confidence            34567799999999999999999999999986543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=97.62  E-value=7.1e-06  Score=75.05  Aligned_cols=39  Identities=31%  Similarity=0.549  Sum_probs=34.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.|++||||+|+||||+.+|.+||
T Consensus       139 ~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl  177 (310)
T 2wqm_A          139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKL  177 (310)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEE
Confidence            445667899999999999999999999999999887764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=97.61  E-value=7e-06  Score=76.56  Aligned_cols=32  Identities=34%  Similarity=0.611  Sum_probs=28.1

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      .++.|++.|+.|||+.||+||||||+||||..
T Consensus       120 ~~~~qi~~al~~lH~~givHrDlkp~NIl~~~  151 (342)
T 2qr7_A          120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVD  151 (342)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEESS
T ss_pred             HHHHHHHHHHHHHHHCCcEeccCCHHHEEEec
Confidence            34567799999999999999999999999854

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=97.61  E-value=5.6e-06  Score=84.12  Aligned_cols=39  Identities=41%  Similarity=0.480  Sum_probs=34.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       494 ~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL  532 (656)
T 2j0j_A          494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL  532 (656)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEE
Confidence            446678899999999999999999999999998887764

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.61  E-value=7.8e-06  Score=76.97  Aligned_cols=32  Identities=16%  Similarity=0.215  Sum_probs=28.9

Q ss_pred             chhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         360 QSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       360 ~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ..|++.++.|||..|||||||||.||||+.+|
T Consensus       211 ~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          211 YADLIALILRLAKHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence            34678999999999999999999999998876

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=97.60  E-value=7.6e-06  Score=74.01  Aligned_cols=39  Identities=28%  Similarity=0.592  Sum_probs=31.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecC---CCccc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNS---NCILK  394 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~---~~~~k  394 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.   ++.+|
T Consensus       126 ~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~k  167 (285)
T 3is5_A          126 VAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIK  167 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEE
T ss_pred             HHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEE
Confidence            3445667799999999999999999999999943   45554

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=97.60  E-value=7.6e-06  Score=78.53  Aligned_cols=33  Identities=36%  Similarity=0.603  Sum_probs=28.7

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ++.|++.|+.|||++||+||||||+||||+..+
T Consensus       244 i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~  276 (419)
T 3i6u_A          244 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE  276 (419)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS
T ss_pred             HHHHHHHHHHHHHHCCccccCCChHhEEEecCC
Confidence            345669999999999999999999999997543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=97.60  E-value=9.5e-06  Score=75.48  Aligned_cols=36  Identities=36%  Similarity=0.688  Sum_probs=31.9

Q ss_pred             chhhhhccccccc-CceEecCCCCCCeeecCCCcccC
Q psy2865         360 QSAAFKSLKYLHS-ARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       360 ~~qi~~gl~y~h~-~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +.|++.|+.|||+ .||+||||+|+||||+.+|.+||
T Consensus       157 ~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl  193 (348)
T 2pml_X          157 IKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKL  193 (348)
T ss_dssp             HHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEE
Confidence            4556999999999 99999999999999999887764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=97.58  E-value=9.6e-06  Score=73.43  Aligned_cols=39  Identities=28%  Similarity=0.467  Sum_probs=32.9

Q ss_pred             cCcchhhhhcccccccCc--eEecCCCCCCeeec-CCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSAR--ILHRDIKPGNLLVN-SNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~--~~hr~~~~~n~~~~-~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.|  |+||||||+||||+ .+|.+||
T Consensus       132 ~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl  173 (290)
T 1t4h_A          132 RSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI  173 (290)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEE
Confidence            345567799999999999  99999999999998 6676653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=97.58  E-value=8.8e-06  Score=79.63  Aligned_cols=33  Identities=36%  Similarity=0.718  Sum_probs=28.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.
T Consensus       124 ~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~  156 (486)
T 3mwu_A          124 ARIIKQVFSGITYMHKHNIVHRDLKPENILLES  156 (486)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESS
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence            345567799999999999999999999999964

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=97.55  E-value=1.2e-05  Score=72.49  Aligned_cols=35  Identities=31%  Similarity=0.517  Sum_probs=30.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ..++.|++.|+.|||+.||+||||+|+||+|+.++
T Consensus       111 ~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  145 (283)
T 3bhy_A          111 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN  145 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC
Confidence            34556779999999999999999999999998876

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=97.55  E-value=1.2e-05  Score=78.93  Aligned_cols=33  Identities=39%  Similarity=0.673  Sum_probs=29.3

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN  390 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~  390 (395)
                      .++.|++.|+.|||+.||+||||||+||||+..
T Consensus       140 ~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  172 (494)
T 3lij_A          140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK  172 (494)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS
T ss_pred             HHHHHHHHHHHHHHHCCceeccCChhhEEEeCC
Confidence            345677999999999999999999999999764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=97.54  E-value=1.2e-05  Score=74.63  Aligned_cols=34  Identities=38%  Similarity=0.567  Sum_probs=29.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN  390 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~  390 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+
T Consensus       131 ~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~  164 (336)
T 3fhr_A          131 AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK  164 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec
Confidence            4456677999999999999999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=97.53  E-value=8.9e-06  Score=76.17  Aligned_cols=39  Identities=44%  Similarity=0.653  Sum_probs=33.4

Q ss_pred             cCcchhhhhcccccccC-ceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~-~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.+++.++.|||+. ||+||||||+||||+.+|.+||
T Consensus       134 ~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl  173 (360)
T 3eqc_A          134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL  173 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEE
Confidence            34456779999999996 9999999999999999887764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=97.53  E-value=8.9e-06  Score=74.55  Aligned_cols=39  Identities=33%  Similarity=0.549  Sum_probs=33.6

Q ss_pred             cCcchhhhhcccccccC-ceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~-~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+. ||+||||+|+||||+.+|.+||
T Consensus       127 ~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl  166 (318)
T 2dyl_A          127 GKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL  166 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEE
Confidence            34556779999999995 9999999999999999887764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=97.52  E-value=1.2e-05  Score=73.68  Aligned_cols=38  Identities=37%  Similarity=0.526  Sum_probs=32.1

Q ss_pred             Ccchhhhhccccccc---CceEecCCCCCCeeecCCCc-ccC
Q psy2865         358 NPQSAAFKSLKYLHS---ARILHRDIKPGNLLVNSNCI-LKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~---~~~~hr~~~~~n~~~~~~~~-~k~  395 (395)
                      .++.|++.|+.|||+   .||+||||||+||||+.+|. +||
T Consensus       106 ~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl  147 (307)
T 2eva_A          106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKI  147 (307)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEE
Confidence            345677999999999   89999999999999988775 453

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=97.52  E-value=8.8e-06  Score=75.10  Aligned_cols=39  Identities=36%  Similarity=0.531  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccC-ceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~-~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+. ||+||||||+||||+.+|.+||
T Consensus       128 ~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl  167 (327)
T 3aln_A          128 GKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL  167 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEE
Confidence            34556779999999998 9999999999999999887764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=97.52  E-value=9.6e-06  Score=76.17  Aligned_cols=32  Identities=34%  Similarity=0.604  Sum_probs=28.5

Q ss_pred             cCcchhhhhcccccccC-ceEecCCCCCCeeec
Q psy2865         357 INPQSAAFKSLKYLHSA-RILHRDIKPGNLLVN  388 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~-~~~hr~~~~~n~~~~  388 (395)
                      ..++.|++.||.|||++ ||+||||||+||||+
T Consensus       134 ~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~  166 (373)
T 1q8y_A          134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  166 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCEEecCCChHHeEEe
Confidence            34566789999999998 999999999999995

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	395
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-29
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-29
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-27
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-27
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-26
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	0.003
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-26
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.001
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-26
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-23
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-23
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	5e-23
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-23
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-22
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-22
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-19
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	0.002
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-19
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-06
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-06
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-18
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-18
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-18
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	0.004
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-06
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-17
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-17
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-17
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-15
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-15
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-15
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-13
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.002
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-13
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-12
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-12
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-12
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	0.004
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	7e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	0.001
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	0.001
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-10
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-10
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-04
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-09
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-04
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-09
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	0.001
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	0.002
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	0.001
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	0.003
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.002
d2trcp_	217	c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [	2e-05
d1f5na1	300	a.114.1.1 (A:284-583) Interferon-induced guanylate	5e-05
d1f5na1	300	a.114.1.1 (A:284-583) Interferon-induced guanylate	2e-04
d1f5na1	300	a.114.1.1 (A:284-583) Interferon-induced guanylate	2e-04
d1f5na1	300	a.114.1.1 (A:284-583) Interferon-induced guanylate	2e-04
d1f5na1	300	a.114.1.1 (A:284-583) Interferon-induced guanylate	5e-04
d1f5na1	300	a.114.1.1 (A:284-583) Interferon-induced guanylate	7e-04
d1f5na1	300	a.114.1.1 (A:284-583) Interferon-induced guanylate	0.003
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-05
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.001
d1k4ta3	230	e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase	3e-04
d1k4ta3	230	e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase	0.003
d1sa0e_	138	a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus	4e-04
d1sa0e_	138	a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus	0.001
d1sa0e_	138	a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus	0.002
d1sa0e_	138	a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus	0.003
d1oisa_	223	e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-te	6e-04
d1oisa_	223	e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-te	9e-04
d1y2oa1	248	a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain	0.001
d1y2oa1	248	a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain	0.004
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.002
d1je5a_	197	b.40.4.7 (A:) gp2.5 {Bacteriophage T7 [TaxId: 1076	0.004

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 3e-29
 Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 115 VMYQATYSSKICDFGLAR---VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWS 171
           V+       K+ DFGLAR   + +       T  VVT +YR PE+L+G R Y   +D+W 
Sbjct: 148 VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG 207

Query: 172 VGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL 231
            GCI AE+  R  + Q  +   QL LI+ L G+ TPE   +  +      L   +  +  
Sbjct: 208 AGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK 267

Query: 232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                 +      A+ L+ ++L  DP +RI  + AL H + 
Sbjct: 268 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 308

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 4e-29
 Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 20/179 (11%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGLA+     PN+A T +VVT++YRAPE+L GAR Y   VD+W+VGCI AELL R 
Sbjct: 140 KLADFGLAK-SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 198

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
                 S + QL  I + LGTPT E+    C        +          L+ + S A  
Sbjct: 199 PFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPG----IPLHHIFSAAGD 254

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIP 302
           + + L+  +  F+P  RI+   AL   Y                   P PT    L  P
Sbjct: 255 DLLDLIQGLFLFNPCARITATQALKMKYFSN---------------RPGPTPGCQLPRP 298

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  107 bits (267), Expect = 3e-27
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 4/151 (2%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLAR     P +  T E+VT +YRAP++LMG++ YS  +D+WSVGCIFAE++   
Sbjct: 140 KIADFGLARAFG-IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            LF   S   QL  I  +LGTP  +   +  +  K        +     S      +   
Sbjct: 199 PLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE--- 255

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
             + LL +ML  DP +RI+   AL H Y  E
Sbjct: 256 SGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 4e-27
 Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 5/153 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+CDFG A+  +    +     + ++YYRAPE++ GA  Y++++DVWS GC+ AELL  +
Sbjct: 163 KLCDFGSAK--QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
            +F   S V QL  I  +LGTPT E++R            Q +           +     
Sbjct: 221 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP--- 277

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
           EA+ L  ++L + PT R++   A  H + DE R
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 7e-04
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 15/73 (20%)

Query: 319 PQPFDDTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHR 378
           P+           + Q +     K    QL               F+SL Y+HS  I HR
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQL---------------FRSLAYIHSFGICHR 146

Query: 379 DIKPGNLLVNSNC 391
           DIKP NLL++ + 
Sbjct: 147 DIKPQNLLLDPDT 159

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 5e-26
 Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 5/152 (3%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
           K+ +FGLAR     P +  + EVVT +YR P++L GA+ YS ++D+WS GCIFAEL    
Sbjct: 141 KLANFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
           R LF       QL  I  LLGTPT E+        K    +      + +SL ++  +  
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWP---SMTKLPDYKPYPMYPATTSLVNVVPKLN 256

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                LL  +L  +P +RIS   AL HPY  +
Sbjct: 257 ATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.003
 Identities = 17/32 (53%), Positives = 21/32 (65%)

Query: 364 FKSLKYLHSARILHRDIKPGNLLVNSNCILKW 395
            K L + HS  +LHRD+KP NLL+N N  LK 
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 6e-26
 Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 4/160 (2%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++     + K+ DFGLAR     P +  T EVVT +YRAPEIL+G ++YS AVD+WS+GC
Sbjct: 133 LLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191

Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL 234
           IFAE++ RR LF   S + QL  I   LGTP                       Q  S +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251

Query: 235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                +   +   LL QML++DP KRIS  +AL HP+  +
Sbjct: 252 VPPLDE---DGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 15/30 (50%), Positives = 22/30 (73%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           + L + HS R+LHRD+KP NLL+N+   +K
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIK 142

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 7e-26
 Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 37/234 (15%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKA--MTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++   T   KICDFGLARV +PD +    +T+ V T++YRAPEI++ ++ Y+ ++D+WSV
Sbjct: 140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 199

Query: 173 GCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS 232
           GCI AE+L  R +F  +  + QL  I  +LG+P+ E++    +    + L        + 
Sbjct: 200 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV- 258

Query: 233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPS 292
               L   A  +A+ LL +ML F+P KRI V  AL HPYL++                  
Sbjct: 259 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY----------------- 301

Query: 293 PTSPPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAE 346
                            Y    EP A  PF    E      +++KE + +  A 
Sbjct: 302 -----------------YDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETAR 338

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           LKY+HSA +LHRD+KP NLL+N+ C LK
Sbjct: 122 LKYIHSANVLHRDLKPSNLLLNTTCDLK 149

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.3 bits (241), Expect = 2e-23
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 8/160 (5%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  ++   K+ DFGLAR+       A+T  VVT +YRAPE+L+    Y+  VD+WSVGC
Sbjct: 147 ILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGC 203

Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL 234
           IFAE+  R+ LF+  S V QLG I D++G P  E+           + RQ   S+S   +
Sbjct: 204 IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-----DVALPRQAFHSKSAQPI 258

Query: 235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
               +        LL++ L F+P KRIS  SAL HPY  +
Sbjct: 259 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 5e-06
 Identities = 15/31 (48%), Positives = 23/31 (74%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILKW 395
           + L +LHS R++HRD+KP N+LV S+  +K 
Sbjct: 127 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 157

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.3 bits (241), Expect = 3e-23
 Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 46/239 (19%)

Query: 116 MYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCI 175
           + ++  + KI DFGLAR      +  MT  VVT+YYRAPE+++G   Y   VD+WSVGCI
Sbjct: 151 VVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 207

Query: 176 FAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS----- 230
             E++  +ILF  +  + Q   + + LGTP PE M+      + ++  + + +       
Sbjct: 208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267

Query: 231 -----LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCK 285
                  +    +     +A  LL +ML  DP KRISV+ AL HPY++            
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV----------- 316

Query: 286 CCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFI 344
             +  P+    P                     PQ +D   + +  ++++ KE ++K +
Sbjct: 317 --WYDPAEVEAP--------------------PPQIYDKQLDEREHTIEEWKELIYKEV 353

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.9 bits (240), Expect = 5e-23
 Identities = 66/231 (28%), Positives = 97/231 (41%), Gaps = 40/231 (17%)

Query: 116 MYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCI 175
                   KI DFGLA       +  MT  V T++YRAPEI++   HY+  VD+WSVGCI
Sbjct: 153 AVNEDCELKILDFGLA----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208

Query: 176 FAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY 235
            AELL  R LF     + QL LI  L+GTP  E ++     +  + ++   +   + +  
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM-NFA 267

Query: 236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTS 295
           ++   A   AV LL +ML  D  KRI+   AL H Y  +                     
Sbjct: 268 NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD------------------ 309

Query: 296 PPTLSIPGGGGGRQYTVDFEPSAPQPFDDTWERKLTSVQQVKEEMHKFIAE 346
                            D EP A  P+D ++E +   + + K   +  +  
Sbjct: 310 ----------------PDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVIS 343

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 6e-23
 Identities = 34/170 (20%), Positives = 62/170 (36%), Gaps = 16/170 (9%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  +    K+CDFG++       +      V T+ Y +PE L G  HYS   D+WS+G 
Sbjct: 136 ILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGL 191

Query: 175 IFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKC-HMLRQTRKSQSLS 232
              E+  GR  +    +   +L     + G       R    G         +R   ++ 
Sbjct: 192 SLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIF 251

Query: 233 SLYSL----------SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            L             S   + E    + + L  +P +R  +   + H ++
Sbjct: 252 ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 365 KSLKYLHSA-RILHRDIKPGNLLVNSNCILK 394
           K L YL    +I+HRD+KP N+LVNS   +K
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 94.5 bits (234), Expect = 2e-22
 Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
           ++ D+GLA      P +     V ++Y++ PE+L+  + Y  ++D+WS+GC+ A ++  +
Sbjct: 170 RLIDWGLAEFY--HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML-----RQTRKSQSLSSLYSL 237
              F       QL  I  +LGT    +     +            R +RK          
Sbjct: 228 EPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN 287

Query: 238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY 271
               + EA+  L ++L +D   R++   A+ HPY
Sbjct: 288 QHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 6e-22
 Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 5/171 (2%)

Query: 104 GYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHY 163
           G   R      +        KI DFGLAR      +  MT  VVT++YRAPE+++    Y
Sbjct: 141 GIIHRDLKPGNLAVNEDCELKILDFGLARQ----ADSEMTGYVVTRWYRAPEVILNWMRY 196

Query: 164 SAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLR 223
           +  VD+WSVGCI AE++  + LF+    + QL  I  + GTP  E ++        + ++
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256

Query: 224 QTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
              + +      S+ + A+  AV+LL +ML  D  +R++   AL HPY + 
Sbjct: 257 GLPELEK-KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 306

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (211), Expect = 1e-19
 Identities = 37/158 (23%), Positives = 55/158 (34%), Gaps = 33/158 (20%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           V      + K+ DFGLAR+   D + A      T YY +PE +     Y+   D+WS+GC
Sbjct: 145 VFLDGKQNVKLGDFGLARILNHDTSFAKAFVG-TPYYMSPEQMNR-MSYNEKSDIWSLGC 202

Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL 234
           +  EL      F A S  +  G I +      P                           
Sbjct: 203 LLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY------------------------ 238

Query: 235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                  + E   ++ +ML      R SV   L +P +
Sbjct: 239 -------SDELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 367 LKYLH-----SARILHRDIKPGNLLVNSNCILK 394
           LK  H        +LHRD+KP N+ ++    +K
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 154

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (210), Expect = 2e-19
 Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 36/158 (22%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++  +    KI DFG +      P+   T    T  Y  PE++ G R +   VD+WS+G 
Sbjct: 137 LLLGSAGELKIADFGWSVH---APSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGV 192

Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL 234
           +  E L  +  F+A +  +    I                                    
Sbjct: 193 LCYEFLVGKPPFEANTYQETYKRI--------------------------------SRVE 220

Query: 235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           ++     T  A  L+ ++L  +P++R  +   L HP++
Sbjct: 221 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 258

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 15/71 (21%)

Query: 324 DTWERKLTSVQQVKEEMHKFIAEQLNTSRVPLCINPQSAAFKSLKYLHSARILHRDIKPG 383
            T  R+L  + +  E+       +L                 +L Y HS R++HRDIKP 
Sbjct: 91  GTVYRELQKLSKFDEQRTATYITEL---------------ANALSYCHSKRVIHRDIKPE 135

Query: 384 NLLVNSNCILK 394
           NLL+ S   LK
Sbjct: 136 NLLLGSAGELK 146

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 7e-19
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 30/153 (19%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           KI DFGLA V   +  + +  ++  T  Y APE+L     ++  VDVWS G +   +L  
Sbjct: 143 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
            + +   S   Q                                K   L+    + S   
Sbjct: 203 ELPWDQPSDSCQE-------------------------YSDWKEKKTYLNPWKKIDS--- 234

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG 275
              + LL ++L  +P+ RI++       + ++ 
Sbjct: 235 -APLALLHKILVENPSARITIPDIKKDRWYNKP 266

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 4e-06
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + YLH   I HRDIKP NLL++    LK
Sbjct: 116 VVYLHGIGITHRDIKPENLLLDERDNLK 143

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 1e-18
 Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 31/149 (20%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGLA   + D          T  + APEI+          D+WS+G I   LL   
Sbjct: 157 KIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGA 213

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F   +  + L  ++ +      E                              S  + 
Sbjct: 214 SPFLGDTKQETLANVSAVNYEFEDE----------------------------YFSNTSA 245

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            A   + ++L  DP KR+++  +L HP++
Sbjct: 246 LAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 82.8 bits (204), Expect = 1e-18
 Identities = 35/156 (22%), Positives = 53/156 (33%), Gaps = 35/156 (22%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARH-----YSAAVDVWSVGCIFAE 178
           K+ DFG +   + DP + + +   T  Y APEI+  + +     Y   VD+WS G I   
Sbjct: 150 KLTDFGFSC--QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 207

Query: 179 LLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS 238
           LL     F  +  +  L +I          E     D                       
Sbjct: 208 LLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD----------------------- 244

Query: 239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                    L+ + L   P KR +   AL HP+  +
Sbjct: 245 -----TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           +  LH   I+HRD+KP N+L++ +  +K
Sbjct: 123 ICALHKLNIVHRDLKPENILLDDDMNIK 150

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 82.8 bits (204), Expect = 3e-18
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 31/154 (20%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFGL      DP +++     T  + APE+  G +      D+WSVG +   LL   
Sbjct: 166 KLIDFGLTAHL--DPKQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGL 222

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F  ++  + L  +                +                            
Sbjct: 223 SPFGGENDDETLRNVKSCDWNMDDSAFSGISE---------------------------- 254

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRL 277
           +    + ++L  DP  R++++ AL HP+L  G  
Sbjct: 255 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSN 390
           L ++H    +H D+KP N++  + 
Sbjct: 137 LCHMHENNYVHLDLKPENIMFTTK 160

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 6e-18
 Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 34/162 (20%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMG----ARHYSAAVDVW 170
           +++      K+ DFG++  +     +     + T Y+ APE++M      R Y    DVW
Sbjct: 141 ILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 199

Query: 171 SVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS 230
           S+G    E+          +P++ L  I                              +S
Sbjct: 200 SLGITLIEMAEIEPPHHELNPMRVLLKIA-----------------------------KS 230

Query: 231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                +  S+ +      L + L  +   R + +  L HP++
Sbjct: 231 EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 272

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 2e-06
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
            +L YLH  +I+HRD+K GN+L   +  +K
Sbjct: 121 DALNYLHDNKIIHRDLKAGNILFTLDGDIK 150

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.2 bits (200), Expect = 7e-18
 Identities = 37/149 (24%), Positives = 54/149 (36%), Gaps = 31/149 (20%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
            I DFGL+++E  DP   ++    T  Y APE+L   + YS AVD WS+G I   LL   
Sbjct: 150 MISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVIAYILLCGY 206

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F  ++  +    I                D                            
Sbjct: 207 PPFYDENDAKLFEQILKAEYEFDSPYWDDISD---------------------------- 238

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
            A   +  ++  DP KR +   AL HP++
Sbjct: 239 SAKDFIRHLMEKDPEKRFTCEQALQHPWI 267

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 1e-17
 Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 31/161 (19%)

Query: 114 LVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVG 173
           +   + + + KI +FG AR  +  P            Y APE+       S A D+WS+G
Sbjct: 134 IYQTRRSSTIKIIEFGQAR--QLKPGDNFRLLFTAPEYYAPEVHQH-DVVSTATDMWSLG 190

Query: 174 CIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
            +   LL     F A++  Q +  I +   T   E  +                      
Sbjct: 191 TLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI------------------ 232

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
                     EA+  + ++L  +   R++ + AL HP+L +
Sbjct: 233 ----------EAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (197), Expect = 1e-17
 Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 34/149 (22%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D GLA ++     KA+   + T  + APE+      Y  +VDV++ G    E+    
Sbjct: 155 KIGDLGLATLKRASFAKAV---IGTPEFMAPEMYEE--KYDESVDVYAFGMCMLEMATSE 209

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             +       Q+               R    G K                 S    A  
Sbjct: 210 YPYSECQNAAQI--------------YRRVTSGVK---------------PASFDKVAIP 240

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
           E   ++   +  +  +R S+   L H + 
Sbjct: 241 EVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 81.3 bits (200), Expect = 1e-17
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 31/159 (19%)

Query: 114 LVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVG 173
           +   +   S KI DFGLA     +P++ +     T  + APEI+          D+W++G
Sbjct: 159 MCETKKASSVKIIDFGLATKL--NPDEIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIG 215

Query: 174 CIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
            +   LL     F  +  ++ L  +         +                         
Sbjct: 216 VLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP------------------ 257

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                     EA   +  +L  +P KR++V+ AL HP+L
Sbjct: 258 ----------EAKDFIKNLLQKEPRKRLTVHDALEHPWL 286

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.3 bits (194), Expect = 6e-17
 Identities = 39/167 (23%), Positives = 60/167 (35%), Gaps = 21/167 (12%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI D G A   +     ++      + YR+PE+L+G   +    D+WS  C+  EL+   
Sbjct: 172 KIADLGNACWYDEHYTNSIQT----REYRSPEVLLG-APWGCGADIWSTACLIFELITGD 226

Query: 184 ILFQAQSP------VQQLGLITDLLGTPTPEEMRHA----------CDGAKCHMLRQTRK 227
            LF+             +  I +LLG      +R+                   L+    
Sbjct: 227 FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPL 286

Query: 228 SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE 274
              L+  Y  S     E    L  ML  DP KR      + HP+L +
Sbjct: 287 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 333

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 8e-17
 Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 31/149 (20%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG      P+ +K  +  V T Y+ APE++   + Y   VD+WS+G +  E++   
Sbjct: 156 KLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGE 213

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             +  ++P++ L LI                          T  +  L +   LS+    
Sbjct: 214 PPYLNENPLRALYLI-------------------------ATNGTPELQNPEKLSA---- 244

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYL 272
                L + L  D  KR S    L H +L
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 12/31 (38%), Positives = 23/31 (74%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILKW 395
           ++L++LHS +++HRDIK  N+L+  +  +K 
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKL 157

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 3e-16
 Identities = 37/161 (22%), Positives = 56/161 (34%), Gaps = 35/161 (21%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++       KI DFG+ + E    +        T  Y APEIL+G + Y+ +VD WS G 
Sbjct: 134 ILLDKDGHIKIADFGMCK-ENMLGDAKTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGV 191

Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL 234
           +  E+L  +  F  Q   +                            +      + L   
Sbjct: 192 LLYEMLIGQSPFHGQDEEELF----------------------HSIRMDNPFYPRWLEK- 228

Query: 235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSA-LCHPYLDE 274
                    EA  LLV++   +P KR+ V      HP   E
Sbjct: 229 ---------EAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 5e-16
 Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 40/158 (25%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQ-YYRAPEILMGARHYSAAVDVWSVGCIFAELLGR 182
           +I DFG A+V  P+  +A     V    Y +PE+L   +    + D+W++GCI  +L+  
Sbjct: 148 QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAG 206

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
              F+A +       I                                +   Y    +  
Sbjct: 207 LPPFRAGNEYLIFQKI--------------------------------IKLEYDFPEKFF 234

Query: 243 GEAVHLLVQMLYFDPTKRISVNSA------LCHPYLDE 274
            +A  L+ ++L  D TKR+             HP+ + 
Sbjct: 235 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 13/28 (46%), Positives = 21/28 (75%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L+YLH   I+HRD+KP N+L+N +  ++
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQ 148

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 2e-15
 Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 41/154 (26%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           K+ DFG   + +       T    T+ Y  PE +   R++  +  VWS+G +  +++   
Sbjct: 151 KLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 207

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           I F+    + +                                             + + 
Sbjct: 208 IPFEHDEEIIR--------------------------------------GQVFFRQRVSS 229

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRL 277
           E  HL+   L   P+ R +      HP++ +  L
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 263

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 3e-15
 Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 29/158 (18%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMG--ARHYSAAVDVWS 171
           +      + KI DFGLA V+         +++  +  + APE++       YS   DV++
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194

Query: 172 VGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL 231
            G +  EL+  ++ +   +   Q+                          +    +    
Sbjct: 195 FGIVLYELMTGQLPYSNINNRDQI--------------------------IFMVGRGYLS 228

Query: 232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH 269
             L  + S        L+ + L     +R      L  
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 7e-05
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + YLH+  I+HRD+K  N+ ++ +  +K
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFLHEDLTVK 144

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.5 bits (180), Expect = 3e-15
 Identities = 32/155 (20%), Positives = 50/155 (32%), Gaps = 37/155 (23%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARH--YSAAVDVWSVGCIFAELLG 181
           K+ DFG A +  P         V T Y+ APE+++      Y   VDVWS+G    EL  
Sbjct: 155 KLGDFGSASIMAP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
           R+      + +  L  I     +P  +                             S   
Sbjct: 210 RKPPLFNMNAMSALYHIAQ-NESPALQ-----------------------------SGHW 239

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGR 276
           +    + +   L   P  R +    L H ++   R
Sbjct: 240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.7 bits (100), Expect = 4e-05
 Identities = 14/32 (43%), Positives = 23/32 (71%)

Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           A + L YLHS  ++HRD+K GN+L++   ++K
Sbjct: 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK 155

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 3e-13
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 27/162 (16%)

Query: 114 LVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVG 173
               +     K+ DFG A+  E   + ++T    T YY APE+L     Y  + D+WS+G
Sbjct: 144 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLG 200

Query: 174 CIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
            I   LL     F +   +                             ++   +      
Sbjct: 201 VIMYILLCGYPPFYSNHGLAIS------------------------PGMKTRIRMGQYEF 236

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG 275
                S+ + E   L+  +L  +PT+R+++   + HP++ + 
Sbjct: 237 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 278

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNC 391
           ++++YLHS  I HRD+KP NLL  S  
Sbjct: 122 EAIQYLHSINIAHRDVKPENLLYTSKR 148

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 4e-13
 Identities = 30/152 (19%), Positives = 46/152 (30%), Gaps = 35/152 (23%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
           K+ DFGLAR+ E +   A         + APE  +    ++   DVWS G +  EL    
Sbjct: 153 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKG 211

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
           R+ +      + L  +      P P E                                 
Sbjct: 212 RVPYPGMVNREVLDQVERGYRMPCPPEC-------------------------------P 240

Query: 243 GEAVHLLVQMLYFDPTKRISVNS--ALCHPYL 272
                L+ Q    +P +R +     A    Y 
Sbjct: 241 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + Y+     +HRD++  N+LV  N + K
Sbjct: 126 MAYVERMNYVHRDLRAANILVGENLVCK 153

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 3e-12
 Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 34/156 (21%)

Query: 125 ICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGA-RHYSAAVDVWSVGCIFAELLGRR 183
           + DFGL++    D  +       T  Y AP+I+ G    +  AVD WS+G +  ELL   
Sbjct: 170 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 229

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F           I+  +    P                                + + 
Sbjct: 230 SPFTVDGEKNSQAEISRRILKSEPP----------------------------YPQEMSA 261

Query: 244 EAVHLLVQMLYFDPTKRISVNS-----ALCHPYLDE 274
            A  L+ ++L  DP KR+            H +  +
Sbjct: 262 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 3e-12
 Identities = 21/156 (13%), Positives = 47/156 (30%), Gaps = 33/156 (21%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
            +       K+ DFGL+R    D   +         +  PE+LM    +S+  D+W+ G 
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGV 189

Query: 175 IFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
           +  E+    ++ ++  +  +    I   L    P                          
Sbjct: 190 LMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA----------------------- 226

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH 269
                   + +   ++    +    +R +    L +
Sbjct: 227 --------SEKVYTIMYSCWHEKADERPTFKILLSN 254

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 4e-12
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 18/156 (11%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAPEILMGARH-----YSAA 166
           ++ +   +  I D GLA   +   +    A    V T+ Y APE+L  + +         
Sbjct: 139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 198

Query: 167 VDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTR 226
            D++++G +F E+  R  +        QL     +   P+ EEMR      K       R
Sbjct: 199 ADIYAMGLVFWEIARRCSIG-GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR 257

Query: 227 KSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRIS 262
                      S +A      ++ +  Y +   R++
Sbjct: 258 WQ---------SCEALRVMAKIMRECWYANGAARLT 284

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 2e-11
 Identities = 31/165 (18%), Positives = 50/165 (30%), Gaps = 38/165 (23%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           V+    + +KI DFGL++    D N  KA T       + APE +     +S+  DVWS 
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSF 196

Query: 173 GCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL 231
           G +  E     +  ++     +   ++        P                        
Sbjct: 197 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC--------------------- 235

Query: 232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRIS---VNSALCHPYLD 273
                       E   L+     +D   R     V   L + Y D
Sbjct: 236 ----------PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 270

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 3e-11
 Identities = 36/156 (23%), Positives = 50/156 (32%), Gaps = 39/156 (25%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
           KI DFGL + E       M     T  Y APE+L     Y  AVD W +G +  E++  R
Sbjct: 145 KITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGR 202

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
           + F  Q   +   LI                                L          + 
Sbjct: 203 LPFYNQDHERLFELI--------------------------------LMEEIRFPRTLSP 230

Query: 244 EAVHLLVQMLYFDPTKRISVNS-----ALCHPYLDE 274
           EA  LL  +L  DP +R+          + H +   
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.004
 Identities = 12/28 (42%), Positives = 21/28 (75%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L+YLHS  +++RDIK  NL+++ +  +K
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIK 145

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 61.7 bits (149), Expect = 3e-11
 Identities = 29/163 (17%), Positives = 47/163 (28%), Gaps = 37/163 (22%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++       +I D GLA              V T  Y APE+L     Y ++ D +S+GC
Sbjct: 138 ILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGC 194

Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL 234
           +  +LL     F+      +  +    L                                
Sbjct: 195 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA----------------------------- 225

Query: 235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNS-----ALCHPYL 272
             L    + E   LL  +L  D  +R+             P+ 
Sbjct: 226 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.3 bits (96), Expect = 1e-04
 Identities = 8/28 (28%), Positives = 22/28 (78%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L+++H+  +++RD+KP N+L++ +  ++
Sbjct: 120 LEHMHNRFVVYRDLKPANILLDEHGHVR 147

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.5 bits (146), Expect = 7e-11
 Identities = 28/165 (16%), Positives = 52/165 (31%), Gaps = 42/165 (25%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++       KI DFG A+               T  Y APE++   + Y+ ++D WS G 
Sbjct: 135 ILLDKNGHIKITDFGFAKYVPDV----TYTLCGTPDYIAPEVVST-KPYNKSIDWWSFGI 189

Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL 234
           +  E+L     F   + ++    I                                L++ 
Sbjct: 190 LIYEMLAGYTPFYDSNTMKTYEKI--------------------------------LNAE 217

Query: 235 YSLSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDE 274
                    +   LL +++  D ++R+            HP+  E
Sbjct: 218 LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 14/28 (50%), Positives = 22/28 (78%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           L+YLHS  I++RD+KP N+L++ N  +K
Sbjct: 117 LEYLHSKDIIYRDLKPENILLDKNGHIK 144

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 60.2 bits (145), Expect = 7e-11
 Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 7/99 (7%)

Query: 124 KICDFGLARVEEPDPNKAMTQE------VVTQYYRAPEILMGARHYSAAVDVWSVGCIFA 177
            + DFG+ +       K             T  Y +    +G R  S   D+ ++G +F 
Sbjct: 146 YVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEALGHVFM 204

Query: 178 ELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDG 216
             L   + +Q             +        +R  C G
Sbjct: 205 YFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAG 243

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 38.3 bits (88), Expect = 0.001
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 363 AFKSLKYLHSARILHRDIKPGNLLVNSNC 391
               ++ +H   +++RDIKP N L+    
Sbjct: 110 MLARVQSIHEKSLVYRDIKPDNFLIGRPN 138

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.9 bits (144), Expect = 1e-10
 Identities = 26/150 (17%), Positives = 44/150 (29%), Gaps = 34/150 (22%)

Query: 115 VMYQATYSSKICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVG 173
            +       KI DFGL+R +   D  KA   + +   +  PE +     Y+   DVW+ G
Sbjct: 171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYG 229

Query: 174 CIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS 232
            +  E+       +   +  + +  + D      PE                        
Sbjct: 230 VVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC---------------------- 267

Query: 233 SLYSLSSQATGEAVHLLVQMLYFDPTKRIS 262
                      E  +L+       P  R S
Sbjct: 268 ---------PLELYNLMRLCWSKLPADRPS 288

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.3 bits (88), Expect = 0.001
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + YL   + +HRD+   N LV  N ++K
Sbjct: 153 MAYLSERKFVHRDLATRNCLVGENMVVK 180

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 59.0 bits (142), Expect = 2e-10
 Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 29/147 (19%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRR 183
                  A  +  +        + T  Y +PE   G     A  DV+S+GC+  E+L   
Sbjct: 153 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGE 211

Query: 184 ILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQATG 243
             F   SPV        +   P P   RH                + LS+          
Sbjct: 212 PPFTGDSPVSVAYQH--VREDPIPPSARH----------------EGLSA---------- 243

Query: 244 EAVHLLVQMLYFDPTKRISVNSALCHP 270
           +   ++++ L  +P  R    + +   
Sbjct: 244 DLDAVVLKALAKNPENRYQTAAEMRAD 270

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 3e-10
 Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 33/147 (22%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-GR 182
           K+ DFG+ R    D   + T       + +PE+      YS+  DVWS G +  E+    
Sbjct: 141 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEG 199

Query: 183 RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQAT 242
           +I ++ +S  + +  I+       P                                  +
Sbjct: 200 KIPYENRSNSEVVEDISTGFRLYKPRLA-------------------------------S 228

Query: 243 GEAVHLLVQMLYFDPTKRISVNSALCH 269
                ++       P  R + +  L  
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 6e-10
 Identities = 22/156 (14%), Positives = 40/156 (25%), Gaps = 37/156 (23%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           V+      +K+ DFGL +      +           + APE L   + +S   DVWS G 
Sbjct: 134 VLVSEDNVAKVSDFGLTKEASSTQDTGKL----PVKWTAPEALRE-KKFSTKSDVWSFGI 188

Query: 175 IFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
           +  E+    R+ +        +  +        P+                         
Sbjct: 189 LLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC----------------------- 225

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH 269
                         ++    + D   R S       
Sbjct: 226 --------PPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           ++YL     +HRD+   N+LV+ + + K
Sbjct: 116 MEYLEGNNFVHRDLAARNVLVSEDNVAK 143

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 1e-09
 Identities = 28/149 (18%), Positives = 47/149 (31%), Gaps = 33/149 (22%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++   T S KI DFGLAR+ E +   A         + APE +     ++   DVWS G 
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGI 198

Query: 175 IFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
           +  E++   RI +   +  + +  +        P+                         
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC----------------------- 235

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRIS 262
                     E   L+       P  R +
Sbjct: 236 --------PEELYQLMRLCWKERPEDRPT 256

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + ++     +HRD++  N+LV+     K
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCK 149

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 5e-09
 Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 35/156 (22%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMT--QEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++  +    K+ DFGL+RV E DP    T     +   + APE +   +  SA  DVWS 
Sbjct: 141 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA-SDVWSF 199

Query: 173 GCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL 231
           G +  E++      +   S  + +  I D    PTP +                      
Sbjct: 200 GIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC--------------------- 238

Query: 232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSAL 267
                           L++Q    +  +R      +
Sbjct: 239 ----------PSAIYQLMMQCWQQERARRPKFADIV 264

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 8e-09
 Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 33/156 (21%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           V+  +    K+ DFGL+R  E       ++  +   + APE +   R +++A DVW  G 
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGV 197

Query: 175 IFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
              E+L      FQ       +G I +    P P                          
Sbjct: 198 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC----------------------- 234

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH 269
                         L+ +   +DP++R         
Sbjct: 235 --------PPTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 9e-09
 Identities = 24/150 (16%), Positives = 43/150 (28%), Gaps = 36/150 (24%)

Query: 124 KICDFGLARV---EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL 180
           K+ DFGLAR    +E D     T   +   + A E L   + ++   DVWS G +  EL+
Sbjct: 170 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELM 228

Query: 181 -GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS 239
                 +   +       +        PE                               
Sbjct: 229 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYC----------------------------- 259

Query: 240 QATGEAVHLLVQMLYFDPTKRISVNSALCH 269
                   ++++  +     R S +  +  
Sbjct: 260 --PDPLYEVMLKCWHPKAEMRPSFSELVSR 287

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 2e-08
 Identities = 30/152 (19%), Positives = 46/152 (30%), Gaps = 36/152 (23%)

Query: 115 VMYQATYSSKICDFGLARV--EEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSV 172
           ++       KI DFGL R   +  D         V   + APE L   R +S A D W  
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMF 200

Query: 173 GCIFAELL-GRRILFQAQSPVQQLGLI-TDLLGTPTPEEMRHACDGAKCHMLRQTRKSQS 230
           G    E+    +  +   +  Q L  I  +    P PE+                     
Sbjct: 201 GVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC-------------------- 240

Query: 231 LSSLYSLSSQATGEAVHLLVQMLYFDPTKRIS 262
                        +  +++VQ     P  R +
Sbjct: 241 -----------PQDIYNVMVQCWAHKPEDRPT 261

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.0 bits (124), Expect = 3e-08
 Identities = 26/149 (17%), Positives = 43/149 (28%), Gaps = 33/149 (22%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
            +    +  K+ DFGL+R+   D   A         + APE L     +S   DVW+ G 
Sbjct: 146 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGV 204

Query: 175 IFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
           +  E+       +      Q   L+        PE                         
Sbjct: 205 LLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC----------------------- 241

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRIS 262
                     +   L+     ++P+ R S
Sbjct: 242 --------PEKVYELMRACWQWNPSDRPS 262

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 368 KYLHSARILHRDIKPGNLLVNSNCILK 394
           +YL     +HRD+   N LV  N ++K
Sbjct: 129 EYLEKKNFIHRDLAARNCLVGENHLVK 155

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 4e-08
 Identities = 24/148 (16%), Positives = 43/148 (29%), Gaps = 34/148 (22%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-G 181
           KI DFGLA++   +  +   +       + A E ++  R Y+   DVWS G    EL+  
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTF 209

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
               +      +   ++      P P                                  
Sbjct: 210 GSKPYDGIPASEISSILEKGERLPQPPIC------------------------------- 238

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCH 269
           T +   ++V+    D   R      +  
Sbjct: 239 TIDVYMIMVKCWMIDADSRPKFRELIIE 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 0.002
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + YL   R++HRD+   N+LV +   +K
Sbjct: 124 MNYLEDRRLVHRDLAARNVLVKTPQHVK 151

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 5e-08
 Identities = 28/165 (16%), Positives = 47/165 (28%), Gaps = 38/165 (23%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV--TQYYRAPEILMGARHYSAAVDVWSV 172
           V+    + +KI DFGL++    D +    +        + APE +   R +S+  DVWS 
Sbjct: 140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSY 198

Query: 173 GCIFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL 231
           G    E L   +  ++     + +  I        P E                      
Sbjct: 199 GVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC--------------------- 237

Query: 232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRIS---VNSALCHPYLD 273
                       E   L+     +    R     V   +   Y  
Sbjct: 238 ----------PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.7 bits (123), Expect = 5e-08
 Identities = 25/158 (15%), Positives = 47/158 (29%), Gaps = 37/158 (23%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV----TQYYRAPEILMGARHYSAAVDVW 170
           ++  +    K+ DFGL+R  E D +       +       + APE +   R +++A DVW
Sbjct: 159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY-RKFTSASDVW 217

Query: 171 SVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQ 229
           S G +  E++      +   +    +  I      P P +                    
Sbjct: 218 SYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDC------------------- 258

Query: 230 SLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSAL 267
                             L++     D   R      +
Sbjct: 259 ------------PSALHQLMLDCWQKDRNHRPKFGQIV 284

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           +KYL     +HRD+   N+LVNSN + K
Sbjct: 141 MKYLADMNYVHRDLAARNILVNSNLVCK 168

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 6e-08
 Identities = 27/156 (17%), Positives = 44/156 (28%), Gaps = 35/156 (22%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++    Y +KI DFGL+R    +     T   +   + A E L     Y+   DVWS G 
Sbjct: 158 ILVGENYVAKIADFGLSRG--QEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGV 214

Query: 175 IFAELL-GRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS 233
           +  E++      +   +  +    +        P                          
Sbjct: 215 LLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC----------------------- 251

Query: 234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH 269
                     E   L+ Q     P +R S    L  
Sbjct: 252 --------DDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           + YL   + +HRD+   N+LV  N + K
Sbjct: 140 MDYLSQKQFIHRDLAARNILVGENYVAK 167

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.6 bits (120), Expect = 1e-07
 Identities = 18/159 (11%), Positives = 36/159 (22%), Gaps = 34/159 (21%)

Query: 126 CDFGLARVEEPDPNKAM------TQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAEL 179
            DFGLA+                     T  Y +    +G    S   D+ S+G +    
Sbjct: 148 IDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYF 206

Query: 180 LGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSS 239
               + +Q      +                       +    + +   + L   Y    
Sbjct: 207 NLGSLPWQGLKAATKRQKY------------------ERISEKKMSTPIEVLCKGYP--- 245

Query: 240 QATGEAVHLLVQMLYFDPTKRIS---VNSALCHPYLDEG 275
               E    L          +     +     + +  +G
Sbjct: 246 ---SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 281

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.7 bits (84), Expect = 0.003
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSN 390
           ++Y+HS   +HRD+KP N L+   
Sbjct: 116 IEYIHSKNFIHRDVKPDNFLMGLG 139

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 1e-07
 Identities = 31/157 (19%), Positives = 44/157 (28%), Gaps = 33/157 (21%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVG 173
           V+       KICDFGLAR    D N        +   + APE L     Y+   DVWS G
Sbjct: 195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYG 253

Query: 174 CIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS 232
            +  E+       +           +  +      +                        
Sbjct: 254 ILLWEIFSLGVNPYPGIPVDANFYKL--IQNGFKMD------------------------ 287

Query: 233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH 269
                   AT E   ++     FD  KR S  +    
Sbjct: 288 ----QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 4e-05
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCIL 393
           K +++L     +HRD+   N+LV    ++
Sbjct: 175 KGMEFLEFKSCVHRDLAARNVLVTHGKVV 203

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.0 bits (116), Expect = 4e-07
 Identities = 32/165 (19%), Positives = 53/165 (32%), Gaps = 42/165 (25%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGC 174
           ++       ++ DFG A+  +                 APEI++  + Y+ AVD W++G 
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWTLCGT----PEALAPEIILS-KGYNKAVDWWALGV 226

Query: 175 IFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL 234
           +  E+      F A  P+Q                        +  +  + R     SS 
Sbjct: 227 LIYEMAAGYPPFFADQPIQIY----------------------EKIVSGKVRFPSHFSS- 263

Query: 235 YSLSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDE 274
                    +   LL  +L  D TKR       VN    H +   
Sbjct: 264 ---------DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (97), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCIL 393
            +YLHS  +++RD+KP NLL++    +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYI 180

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 2e-06
 Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 33/148 (22%)

Query: 124 KICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-G 181
           KICDFGLAR    DP+     +      + APE +   R Y+   DVWS G +  E+   
Sbjct: 174 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSL 232

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
               +      ++                R   +G +                       
Sbjct: 233 GASPYPGVKIDEEF--------------CRRLKEGTR----------------MRAPDYT 262

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSALCH 269
           T E    ++   + +P++R + +  + H
Sbjct: 263 TPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 9/30 (30%), Positives = 20/30 (66%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           K +++L S + +HRD+   N+L++   ++K
Sbjct: 145 KGMEFLASRKCIHRDLAARNILLSEKNVVK 174

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 3e-06
 Identities = 26/146 (17%), Positives = 45/146 (30%), Gaps = 34/146 (23%)

Query: 124 KICDFGLAR-VEEPDPNKAMTQEVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-G 181
           KI DFG+ R + E D  +   + ++   + +PE L     ++   DVWS G +  E+   
Sbjct: 173 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATL 231

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
               +Q  S  Q L  + +                                 L       
Sbjct: 232 AEQPYQGLSNEQVLRFVME-------------------------------GGLLDKPDNC 260

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSAL 267
                 L+     ++P  R S    +
Sbjct: 261 PDMLFELMRMCWQYNPKMRPSFLEII 286

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 4e-06
 Identities = 27/146 (18%), Positives = 43/146 (29%), Gaps = 34/146 (23%)

Query: 124 KICDFGLARVEEPDPNKAMTQ-EVVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELL-G 181
           KI DFGLAR          T    +   + APE L   R Y+   DVWS G +  E+   
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTL 233

Query: 182 RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLSSQA 241
               +      +   L+ +      P                                  
Sbjct: 234 GGSPYPGVPVEELFKLLKEGHRMDKPSNC------------------------------- 262

Query: 242 TGEAVHLLVQMLYFDPTKRISVNSAL 267
           T E   ++    +  P++R +    +
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLV 288

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 0.002
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCILK 394
           ++YL S + +HRD+   N+LV  + ++K
Sbjct: 148 MEYLASKKCIHRDLAARNVLVTEDNVMK 175

>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 217

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Phosducin
domain: Phosducin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 13/89 (14%), Positives = 36/89 (40%)

Query: 6   KKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGRRR 65
           +K + + E        +K+   +    + +  ++ K+   +K   +  E    ++E    
Sbjct: 17  RKFKLESEDGDSIPPSKKEILRQMSSPQSRDDKDSKERMSRKMSIQEYELIHQDKEDEGC 76

Query: 66  RRRRRRRRKKEREKKRSSRRKPFKLSEIS 94
            R+ RR+  ++  +K S   +   + E+ 
Sbjct: 77  LRKYRRQCMQDMHQKLSFGPRYGFVYELE 105

>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300

class: All alpha proteins
fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 5e-05
 Identities = 13/81 (16%), Positives = 40/81 (49%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +   +   E +++ ++  ++KE+  +E  K+  +K + ++ +  K++E     + +E E+
Sbjct: 217 QASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQ 276

Query: 61  EGRRRRRRRRRRRKKEREKKR 81
             +   ++  R  K E +  +
Sbjct: 277 LLKEGFQKESRIMKNEIQDLQ 297

>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300

class: All alpha proteins
fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 11/76 (14%), Positives = 38/76 (50%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            + + K ++  ++K++  ++  K+  EK +    +  +E+++    K +E+ +  +EG +
Sbjct: 224 HEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQ 283

Query: 61  EGRRRRRRRRRRRKKE 76
           +  R  +   +  + +
Sbjct: 284 KESRIMKNEIQDLQTK 299

>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300

class: All alpha proteins
fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 7/81 (8%), Positives = 39/81 (48%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
            ++ + +  +   K   + +++ ++  ++K++  ++  ++  EK + +  +  +E+E   
Sbjct: 208 VERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTL 267

Query: 61  EGRRRRRRRRRRRKKEREKKR 81
             + + + +  +   ++E + 
Sbjct: 268 ALKLQEQEQLLKEGFQKESRI 288

>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300

class: All alpha proteins
fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 15/86 (17%), Positives = 41/86 (47%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E + E+ K +  +   +   + ++K E+  +++++  +E  K+  +K E +  +  + +E
Sbjct: 205 EIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQE 264

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRK 86
                + + + +  KE  +K S   K
Sbjct: 265 RTLALKLQEQEQLLKEGFQKESRIMK 290

>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300

class: All alpha proteins
fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 5e-04
 Identities = 14/85 (16%), Positives = 39/85 (45%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEE 61
           + +  K E  +   K   + ++K ++  ++KE+  +E  K+  +K E +  +  +E E  
Sbjct: 207 EVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERT 266

Query: 62  GRRRRRRRRRRRKKEREKKRSSRRK 86
              + + + +  K+  +K+    + 
Sbjct: 267 LALKLQEQEQLLKEGFQKESRIMKN 291

>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300

class: All alpha proteins
fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 7e-04
 Identities = 12/86 (13%), Positives = 38/86 (44%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
                  +  +   +KEK+ + ++ K +  +   K   E +++ ++  E++    +E  +
Sbjct: 187 SMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLK 246

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRK 86
           +   +    R +  KE+E+  + + +
Sbjct: 247 QLTEKMENDRVQLLKEQERTLALKLQ 272

>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 300

class: All alpha proteins
fold: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
superfamily: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
family: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
domain: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 0.003
 Identities = 11/89 (12%), Positives = 43/89 (48%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
             +   +KEK+ E ++ K +  +   +   + ++K ++  +++++  +E   +  E+ E 
Sbjct: 195 TDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMEN 254

Query: 61  EGRRRRRRRRRRRKKEREKKRSSRRKPFK 89
           +  +  + + R    + +++    ++ F+
Sbjct: 255 DRVQLLKEQERTLALKLQEQEQLLKEGFQ 283

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 9e-05
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 365 KSLKYLHSARILHRDIKPGNLLVNSNCILK 394
           K + +L S   +HRD+   N+L+    I K
Sbjct: 156 KGMAFLASKNCIHRDLAARNILLTHGRITK 185

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 0.001
 Identities = 30/156 (19%), Positives = 47/156 (30%), Gaps = 35/156 (22%)

Query: 115 VMYQATYSSKICDFGLARVEEPDPNKAMTQEVV-TQYYRAPEILMGARHYSAAVDVWSVG 173
           ++      +KICDFGLAR  + D N  +         + APE +     Y+   DVWS G
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYG 234

Query: 174 CIFAELL-GRRILFQAQSPVQQL-GLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL 231
               EL       +       +   +I +     +PE                       
Sbjct: 235 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA--------------------- 273

Query: 232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSAL 267
                       E   ++      DP KR +    +
Sbjct: 274 ----------PAEMYDIMKTCWDADPLKRPTFKQIV 299

>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment {Human (Homo sapiens) [TaxId: 9606]} Length = 230

class: Multi-domain proteins (alpha and beta)
fold: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
superfamily: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
family: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
domain: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEK 44
           + + E +K+  KE+K K K++ EK  K+      +  KE+
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKER 149

>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment {Human (Homo sapiens) [TaxId: 9606]} Length = 230

class: Multi-domain proteins (alpha and beta)
fold: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
superfamily: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
family: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
domain: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 9/58 (15%)

Query: 2   KKKEKKKEKKKEKKKEK------KKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGE 53
           +K+   +EK       K       +  K + E +K   +  KEEK K K++ E+   E
Sbjct: 83  RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARK---QMSKEEKLKIKEENEKLLKE 137

>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Stathmin
family: Stathmin
domain: Stathmin 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.9 bits (88), Expect = 4e-04
 Identities = 13/80 (16%), Positives = 38/80 (47%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           E++++ ++ +  +   EK++ E++  +K  ++     +  K++  +K E   E  E    
Sbjct: 55  EERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLA 114

Query: 61  EGRRRRRRRRRRRKKEREKK 80
               R + + +  ++ R+ K
Sbjct: 115 AMLERLQEKDKHAEEVRKNK 134

>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Stathmin
family: Stathmin
domain: Stathmin 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.4 bits (84), Expect = 0.001
 Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 2   KKKEKKKEKKKEKK---KEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEG 58
           ++ +KK E  +E++   + +  K   +K + +++  +K  E+     K  +E+  ++ E 
Sbjct: 45  EEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMES 104

Query: 59  EEEGRRRRRRRRRRRKKEREKKRSSRRK 86
            +E R         R +E++K     RK
Sbjct: 105 NKENREAHLAAMLERLQEKDKHAEEVRK 132

>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Stathmin
family: Stathmin
domain: Stathmin 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.0 bits (83), Expect = 0.002
 Identities = 10/84 (11%), Positives = 39/84 (46%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           +      ++++   E+ +K+ +  E+++K ++ +  +   EK++ E E  ++  E     
Sbjct: 31  EFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNF 90

Query: 63  RRRRRRRRRRRKKEREKKRSSRRK 86
            +  + +  ++ +  ++ R +   
Sbjct: 91  IKMAKEKLAQKMESNKENREAHLA 114

>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Stathmin
family: Stathmin
domain: Stathmin 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.6 bits (82), Expect = 0.003
 Identities = 14/84 (16%), Positives = 36/84 (42%)

Query: 3   KKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEG 62
           ++     ++ +KK E  ++ +K +E +  K   +K E ++E  +K  EE     +  +E 
Sbjct: 38  RRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEK 97

Query: 63  RRRRRRRRRRRKKEREKKRSSRRK 86
             ++    +  ++        R +
Sbjct: 98  LAQKMESNKENREAHLAAMLERLQ 121

>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 223

class: Multi-domain proteins (alpha and beta)
fold: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
superfamily: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
family: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
domain: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 10/40 (25%), Positives = 27/40 (67%)

Query: 5   EKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEK 44
           + +KE+KK+   ++KK+ + ++EK ++  K  + + ++E+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEEDYKFCELDGRREQ 141

>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 223

class: Multi-domain proteins (alpha and beta)
fold: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
superfamily: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
family: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
domain: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.2 bits (89), Expect = 9e-04
 Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 2   KKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKK---KEEKKKEKKKKEEEEGE 53
           K+        + K+  +    K     + +KE+KK    +EKK+ + ++E+ E +
Sbjct: 75  KESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129

>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: IMD domain
domain: BAP2/IRSp53 N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 11/67 (16%), Positives = 28/67 (41%)

Query: 1   EKKKEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEE 60
           +K +   +      KK + ++  K     K + + KK  KK +  K  ++  ++E +  +
Sbjct: 107 QKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYID 166

Query: 61  EGRRRRR 67
               ++ 
Sbjct: 167 AISNKQG 173

>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: IMD domain
domain: BAP2/IRSp53 N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 11/72 (15%), Positives = 30/72 (41%)

Query: 4   KEKKKEKKKEKKKEKKKKEKKKKEKKKKKEKKKKEEKKKEKKKKEEEEGEEEEEGEEEGR 63
           ++K +   +      KK + +++ K    +K + E KK  KK +  +  ++  + E +  
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYI 165

Query: 64  RRRRRRRRRRKK 75
                ++   + 
Sbjct: 166 DAISNKQGELEN 177

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query: 367 LKYLHSARILHRDIKPGNLLVNSNCI 392
           +   +   I+H D+   N+LV+   I
Sbjct: 116 VAKFYHRGIVHGDLSQYNVLVSEEGI 141

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	395
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.98
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.97
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.96
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.4
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.56
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.55
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.54
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	98.54
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.51
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.51
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	98.5
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.49
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	98.49
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.48
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	98.47
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	98.47
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.46
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.45
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.43
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	98.42
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.42
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.41
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	98.4
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.4
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.4
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.38
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	98.37
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.37
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.37
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.37
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.36
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.36
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.36
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.35
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.33
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.32
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	98.31
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.3
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.3
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.29
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.28
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	98.28
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.28
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	98.27
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.26
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.25
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	98.25
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.25
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.24
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	98.21
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.2
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.2
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.19
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.19
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.16
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.15
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.13
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	98.12
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.1
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	98.09
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.09
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.07
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.06
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	98.03
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	97.99
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	97.71
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.37
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.65
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.23
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	89.59
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	87.16

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-44  Score=329.30  Aligned_cols=192  Identities=30%  Similarity=0.427  Sum_probs=160.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||++
T Consensus        94 ~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~  172 (299)
T d1ua2a_          94 SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP-NRAYTHQVVTRWYRAPELL  172 (299)
T ss_dssp             CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-CCCCCCSCCCCTTCCHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCC-cccccceecChhhccHHHH
Confidence            467899999999999999999999999999999999999999999999999999876543 2334556899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...|+.++||||+||++|||++|.+||.+.+..+++..|.+.+|+|+.+.+.............    ......+...
T Consensus       173 ~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  248 (299)
T d1ua2a_         173 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK----SFPGIPLHHI  248 (299)
T ss_dssp             TTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC----CCCCCCHHHH
T ss_pred             ccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc----cCCCCChHHh
Confidence            876668999999999999999999999999999999999999999999887654432221111110    1111122344


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....++++.|||.+||++||++||||+|+|+||||.+
T Consensus       249 ~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~  285 (299)
T d1ua2a_         249 FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN  285 (299)
T ss_dssp             CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCC
Confidence            5678899999999999999999999999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=313.28  Aligned_cols=162  Identities=21%  Similarity=0.307  Sum_probs=143.1

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +...+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|.....   ......+||+.|+|||+
T Consensus        99 ~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~---~~~~~~~Gt~~Y~APE~  175 (263)
T d2j4za1          99 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEM  175 (263)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC---CCCEETTEEGGGCCHHH
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCC---CcccccCCCCcccCHHH
Confidence            345789999999999999999999999999999999999999999999999999986532   33456789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++||||+||++|+|++|.+||.+.+..+.+..|...                                ...
T Consensus       176 ~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--------------------------------~~~  222 (263)
T d2j4za1         176 IEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------------------------------EFT  222 (263)
T ss_dssp             HTTCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--------------------------------CCC
T ss_pred             HcCCC-CCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--------------------------------CCC
Confidence            99876 899999999999999999999999998887777766431                                123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ++...++.+.+||.+||..||.+|||++|+|+||||+.
T Consensus       223 ~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         223 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             CCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            45668899999999999999999999999999999974

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-42  Score=318.53  Aligned_cols=190  Identities=33%  Similarity=0.506  Sum_probs=159.8

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ....+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+++....  .......+||+.|+|||+
T Consensus       109 ~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~--~~~~~~~~gT~~Y~APE~  186 (305)
T d1blxa_         109 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEV  186 (305)
T ss_dssp             CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG--GGGGCCCCCCCTTCCHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcc--cccCCCcccChhhcCcch
Confidence            345678888999999999999999999999999999999999999999999999986432  234566799999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++||||+||++|||++|.+||.+.+..+++..|...+|.+....|...........     ..........
T Consensus       187 ~~~~~-y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  260 (305)
T d1blxa_         187 LLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF-----HSKSAQPIEK  260 (305)
T ss_dssp             HTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGS-----CCCCCCCGGG
T ss_pred             hcCCC-CChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhh-----ccccccchhh
Confidence            99876 99999999999999999999999999999999999999999998876654322111111     1111122334


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +....++.+.|||.+||.+||.+||||.|+|+||||.+
T Consensus       261 ~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~  298 (305)
T d1blxa_         261 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD  298 (305)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcC
Confidence            56778999999999999999999999999999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-41  Score=317.19  Aligned_cols=192  Identities=30%  Similarity=0.485  Sum_probs=162.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+...    ...+..+||+.|+|||++
T Consensus       115 ~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~----~~~~~~~~t~~y~aPE~~  190 (346)
T d1cm8a_         115 HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD----SEMTGYVVTRWYRAPEVI  190 (346)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC----SSCCSSCSCGGGCCTHHH
T ss_pred             hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccC----CccccccccccccCHHHH
Confidence            3569999999999999999999999999999999999999999999999999998753    345677999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|.+||.+.+..+++..+....|.++.+.+................. .....+...
T Consensus       191 ~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  269 (346)
T d1cm8a_         191 LNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPE-LEKKDFASI  269 (346)
T ss_dssp             HTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCC-CCCCCGGGT
T ss_pred             cCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCc-ccccchHHh
Confidence            8876689999999999999999999999999999999999999999999988765533322222211111 111223345


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....++.+.|||.+||.+||.+||||.|+|+||||..
T Consensus       270 ~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         270 LTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             CTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             ccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence            5778999999999999999999999999999999975

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-41  Score=310.46  Aligned_cols=165  Identities=22%  Similarity=0.265  Sum_probs=143.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      +.+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||++.
T Consensus       111 ~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~-~~~~~~~~gt~~Y~aPE~~~  189 (293)
T d1yhwa1         111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRSTMVGTPYWMAPEVVT  189 (293)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST-TCCBCCCCSCGGGCCHHHHS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccc-cccccccccCCCccChhhhc
Confidence            46899999999999999999999999999999999999999999999999999876542 23455678999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +.. |+.++||||+||++|+|++|.+||.+.+..+.+..+.... .+                            ....+
T Consensus       190 ~~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~-~~----------------------------~~~~~  239 (293)
T d1yhwa1         190 RKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TP----------------------------ELQNP  239 (293)
T ss_dssp             SSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC-SC----------------------------CCSSG
T ss_pred             CCC-CCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCC-CC----------------------------CCCCc
Confidence            876 8999999999999999999999999988877777664321 11                            11234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...++.+.+||.+||..||.+||||.|+|+||||..
T Consensus       240 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             GGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            567899999999999999999999999999999964

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=307.90  Aligned_cols=167  Identities=19%  Similarity=0.199  Sum_probs=137.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+...... ....+..+||+.|+|||++
T Consensus        98 ~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~  177 (271)
T d1nvra_          98 IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  177 (271)
T ss_dssp             TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHh
Confidence            468999999999999999999999999999999999999999999999999998754321 2335567999999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|+|++|.+||.+.+.......+.....                             .....
T Consensus       178 ~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~  228 (271)
T d1nvra_         178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-----------------------------TYLNP  228 (271)
T ss_dssp             HCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTC-----------------------------TTSTT
T ss_pred             cCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-----------------------------CCCCc
Confidence            8877457889999999999999999999987665443333221110                             00112


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      +...++.+.+||.+||..||.+|||++|+|+||||..
T Consensus       229 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         229 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence            2456889999999999999999999999999999974

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-41  Score=312.39  Aligned_cols=166  Identities=25%  Similarity=0.305  Sum_probs=145.8

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      .+...+++..++.++.||+.||.|||+.|||||||||+|||++.+|.+||+|||+|+.... ........+||+.|+|||
T Consensus        97 ~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~-~~~~~~~~~GT~~Y~aPE  175 (337)
T d1o6la_          97 SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKTFCGTPEYLAPE  175 (337)
T ss_dssp             HHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-TTCCBCCCEECGGGCCGG
T ss_pred             hcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccccccccc-CCcccccceeCHHHhhhh
Confidence            3456789999999999999999999999999999999999999999999999999986543 233456679999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.+ |+.++||||+||++|||++|.+||.+.+....+..|...                                ..
T Consensus       176 ~~~~~~-y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~--------------------------------~~  222 (337)
T d1o6la_         176 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--------------------------------EI  222 (337)
T ss_dssp             GGSSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CC
T ss_pred             hccCCC-CChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC--------------------------------CC
Confidence            999876 899999999999999999999999999887777666431                                12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEG  275 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~  275 (395)
                      .++...++.+.+||.+||+.||.+|+     +++|+++||||.+.
T Consensus       223 ~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         223 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            45567899999999999999999999     49999999999764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-41  Score=306.50  Aligned_cols=167  Identities=23%  Similarity=0.343  Sum_probs=141.5

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPE  155 (395)
                      ..+.+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+...... ....+..+||+.|+|||
T Consensus       101 ~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE  180 (288)
T d1uu3a_         101 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE  180 (288)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCce
Confidence            44679999999999999999999999999999999999999999999999999998765322 23345678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++||||+||++|+|++|.+||.+.+..+.+..|...                                ..
T Consensus       181 ~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~--------------------------------~~  227 (288)
T d1uu3a_         181 LLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------------------------EY  227 (288)
T ss_dssp             HHHTCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT--------------------------------CC
T ss_pred             eeccCC-CCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC--------------------------------CC
Confidence            999876 899999999999999999999999999888877776531                                12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHH------HHcCCccccCc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNS------ALCHPYLDEGR  276 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e------~L~Hp~f~~~~  276 (395)
                      .++...++.+.+||.+||..||.+|||++|      +++||||.+..
T Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         228 DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence            345678899999999999999999999988      58899998743

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=312.89  Aligned_cols=193  Identities=27%  Similarity=0.439  Sum_probs=158.7

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-CeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ....+++..++.++.||+.||.|||+.||+||||||+|||++.++ .+||+|||+|+....  .......+||+.|+|||
T Consensus       115 ~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE  192 (350)
T d1q5ka_         115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSRYYRAPE  192 (350)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCT--TSCCCSCCSCTTSCCHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccC--CcccccccccccccChH
Confidence            345688999999999999999999999999999999999999775 899999999987643  23455678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+...|+.++||||+||++|||++|.+||.+.+..+++..|...+|.+..+.+................ ...  ...
T Consensus       193 ~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~  269 (350)
T d1q5ka_         193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK-AHP--WTK  269 (350)
T ss_dssp             HHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCC-CCC--GGG
T ss_pred             HhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccc-cCc--hhh
Confidence            99876669999999999999999999999999999999999999999999998877653322211111000 001  111


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..++++.|||.+||.+||.+||||.|+|+||||..
T Consensus       270 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         270 VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             TSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             hcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            234567899999999999999999999999999999976

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-40  Score=311.66  Aligned_cols=163  Identities=23%  Similarity=0.249  Sum_probs=144.0

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +.+.+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+...    ......+||+.|||||+
T Consensus       134 ~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~----~~~~~~~Gt~~Y~APE~  209 (350)
T d1rdqe_         134 RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWTLCGTPEALAPEI  209 (350)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECS----SCBCCCEECGGGCCHHH
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecc----cccccccCccccCCHHH
Confidence            34579999999999999999999999999999999999999999999999999999754    23456789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++|||||||++|+|++|.+||.+.+....+..|...                                ...
T Consensus       210 ~~~~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--------------------------------~~~  256 (350)
T d1rdqe_         210 ILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--------------------------------KVR  256 (350)
T ss_dssp             HTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------------------------------CCC
T ss_pred             HcCCC-CCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC--------------------------------CCC
Confidence            99876 899999999999999999999999999888877777542                                123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      .+...++.+.+||.+||..||.+|+     |++++|+||||.+..
T Consensus       257 ~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~  301 (350)
T d1rdqe_         257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             CCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCC
Confidence            4467889999999999999999995     999999999998743

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-40  Score=307.96  Aligned_cols=194  Identities=35%  Similarity=0.575  Sum_probs=158.0

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC--CCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP--NKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~--~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|.......  .......+||+.|+|||+
T Consensus       104 ~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  183 (345)
T d1pmea_         104 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI  183 (345)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHH
Confidence            469999999999999999999999999999999999999999999999999998654321  123456789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhh-hhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKC-HMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  235 (395)
                      +.....|+.++||||+||++|+|++|.+||.+.+..++...+...++.+.............. .........  ...+.
T Consensus       184 l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  261 (345)
T d1pmea_         184 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKN--KVPWN  261 (345)
T ss_dssp             TTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCC--CCCHH
T ss_pred             hhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccC--CCCHH
Confidence            866656899999999999999999999999999999999999999998887765443222111 111111111  11123


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+..++.+.+||.+||.+||.+||||.|+|+||||..
T Consensus       262 ~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~  300 (345)
T d1pmea_         262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  300 (345)
T ss_dssp             HHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            445678899999999999999999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-40  Score=304.99  Aligned_cols=193  Identities=33%  Similarity=0.444  Sum_probs=158.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+....+ .......+||+.|+|||++
T Consensus        96 ~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~-~~~~~~~~gt~~y~apE~~  174 (298)
T d1gz8a_          96 LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPEIL  174 (298)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC-SBCTTCCBCCCTTCCHHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCC-cccceeecccceeeehhhh
Confidence            456899999999999999999999999999999999999999999999999999876542 3445567899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .....++.++||||+||++|+|++|.+||.+.+..+++..+....|.+....+......... ..  .............
T Consensus       175 ~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~  251 (298)
T d1gz8a_         175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-KP--SFPKWARQDFSKV  251 (298)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC-CT--TSCCCCCCCHHHH
T ss_pred             ccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccc-cc--ccccccccchhhh
Confidence            88776789999999999999999999999999999999999998888876655433211110 00  0000111122344


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ....+..+.|||.+||.+||.+||||+|+|+||||++
T Consensus       252 ~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~  288 (298)
T d1gz8a_         252 VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD  288 (298)
T ss_dssp             STTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhcc
Confidence            5678899999999999999999999999999999976

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=308.28  Aligned_cols=196  Identities=26%  Similarity=0.366  Sum_probs=152.6

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC---CCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP---NKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~---~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+......   .......+||++|+||
T Consensus       111 ~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aP  190 (318)
T d3blha1         111 LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP  190 (318)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCH
T ss_pred             ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhH
Confidence            3467778888999999999999999999999999999999999999999999998654321   1233446899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC-Cccch
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS-QSLSS  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  233 (395)
                      |++.+...|+.++||||+||++|||++|.+||.+.+....+..|...+|.++++.+.................. .....
T Consensus       191 E~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (318)
T d3blha1         191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD  270 (318)
T ss_dssp             HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHH
T ss_pred             HHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchh
Confidence            99988766999999999999999999999999999999999999999998887655443222111111111110 00000


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .. .....++.+.|||.+||.+||++||||+|+|+||||..
T Consensus       271 ~~-~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         271 RL-KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             HH-HHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             hh-ccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence            00 01234778999999999999999999999999999975

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.2e-40  Score=302.99  Aligned_cols=192  Identities=31%  Similarity=0.428  Sum_probs=155.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|.....+ .......++|+.|+|||++
T Consensus        94 ~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~~~~~~~y~~pE~~  172 (286)
T d1ob3a_          94 EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-VRKYTHEIVTLWYRAPDVL  172 (286)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHH
T ss_pred             cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccC-ccccceecccchhhhHHHH
Confidence            467899999999999999999999999999999999999999999999999999876532 2234455789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      .+...++.++||||+||++|||++|.+||.+.+..+++..|...+|.+....|...............   .........
T Consensus       173 ~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  249 (286)
T d1ob3a_         173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV---YEPLPWESF  249 (286)
T ss_dssp             TTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC---CCCCCGGGT
T ss_pred             hCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccccc---ccCcchhhh
Confidence            87766899999999999999999999999999999999999999999887766544322211111000   111122345


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      ....++.+.|||.+||++||++||||+|+|+||||+
T Consensus       250 ~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~  285 (286)
T d1ob3a_         250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK  285 (286)
T ss_dssp             CCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            567889999999999999999999999999999996

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-41  Score=305.94  Aligned_cols=168  Identities=18%  Similarity=0.235  Sum_probs=140.9

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... .......+||+.|+|||+
T Consensus       103 ~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~-~~~~~~~~Gt~~y~APE~  181 (288)
T d2jfla1         103 LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYWMAPEV  181 (288)
T ss_dssp             HTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH-HHHHTCCCSCCTTCCHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC-cccccccccccccCCHHH
Confidence            3456899999999999999999999999999999999999999999999999999764321 122345789999999999


Q ss_pred             hhc----CCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         157 LMG----ARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       157 l~~----~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      +.+    ...|+.++||||+||++|+|++|.+||.+.+..+.+..|....  ++                          
T Consensus       182 l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~--~~--------------------------  233 (288)
T d2jfla1         182 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PP--------------------------  233 (288)
T ss_dssp             HTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC--CC--------------------------
T ss_pred             HhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--CC--------------------------
Confidence            853    2348899999999999999999999999988888777765421  10                          


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ....+...++.+.+||.+||..||.+|||++|+|+||||..
T Consensus       234 -~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         234 -TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             -CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             -CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence             11233567889999999999999999999999999999964

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-41  Score=312.15  Aligned_cols=194  Identities=18%  Similarity=0.222  Sum_probs=133.5

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      +.+.+++..++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+|+....   ...++.+||++|||||
T Consensus        97 ~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~---~~~~~~~GT~~Y~APE  173 (322)
T d1s9ja_          97 KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPE  173 (322)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---HTC---CCSSCCCCHH
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC---CccccccCCccccCch
Confidence            34578999999999999999999997 5999999999999999999999999999987532   2345679999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHh-HHHHHHHhcCCCCHHHHHhhhhhhhhhhh-hccccCCc---
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQ-QLGLITDLLGTPTPEEMRHACDGAKCHML-RQTRKSQS---  230 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~---  230 (395)
                      ++.+.. |+.++||||+||++|||++|..||.+.+... ++..+....|.+................. ........   
T Consensus       174 vl~~~~-y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (322)
T d1s9ja_         174 RLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFE  252 (322)
T ss_dssp             HHHCSC-CCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHH
T ss_pred             HHcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHH
Confidence            999976 9999999999999999999999998876432 33333333333322111000000000000 00000000   


Q ss_pred             -cchh-----hcc-CCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         231 -LSSL-----YSL-SSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       231 -~~~~-----~~~-~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                       ....     ... ....+.++.|||.+||.+||.+||||+|+|+||||..
T Consensus       253 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         253 LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             HHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence             0000     001 1235789999999999999999999999999999975

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-40  Score=307.03  Aligned_cols=229  Identities=31%  Similarity=0.456  Sum_probs=175.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      +.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|....    ......+||+.|+|||++.
T Consensus       116 ~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~----~~~~~~~g~~~y~apE~~~  191 (348)
T d2gfsa1         116 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIML  191 (348)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCT----GGGSSSCHHHHTSCHHHHT
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccC----cccccccccccccCchhhc
Confidence            459999999999999999999999999999999999999999999999999998643    3455678999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      +...++.++||||+||++|+|++|.+||.+.+.......|....+.+..+.+................. .....+....
T Consensus       192 ~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  270 (348)
T d2gfsa1         192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ-MPKMNFANVF  270 (348)
T ss_dssp             TCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCC-CCCCCHHHHS
T ss_pred             CCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhccc-CCCcchhhhc
Confidence            877679999999999999999999999999999999999999999988876654432222111111111 1111223345


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccCcccccccccccccCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEGRLRFHSCMCKCCYTTPSPTSPPTLSIPGGGGGRQYTVDFEPSA  318 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (395)
                      ...++.+.|||.+||.+||.+||||.|+|+||||...    +                              .+..+|++
T Consensus       271 ~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~----~------------------------------~~~~~~~~  316 (348)
T d2gfsa1         271 IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY----H------------------------------DPDDEPVA  316 (348)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT----C------------------------------CTTSCCCC
T ss_pred             CCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC----C------------------------------CCccCCCC
Confidence            6789999999999999999999999999999999751    1                              11223333


Q ss_pred             CCCCCchhHHhhhhhhHHhhHHHHHHHhh
Q psy2865         319 PQPFDDTWERKLTSVQQVKEEMHKFIAEQ  347 (395)
Q Consensus       319 ~~~~~~~~~~~~~~~~~l~~~i~~~I~~~  347 (395)
                       .+++..++.......+++..+..+++.+
T Consensus       317 -~~~~~~~~~~~~~~~~~k~~~~~e~~~~  344 (348)
T d2gfsa1         317 -DPYDQSFESRDLLIDEWKSLTYDEVISF  344 (348)
T ss_dssp             -CCCCCGGGGCCCCHHHHHHHHHHHHHTC
T ss_pred             -CCCCCcccchhcCHHHHHHHHHHHhhcc
Confidence             3455555555666677777777776654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-40  Score=305.69  Aligned_cols=166  Identities=23%  Similarity=0.297  Sum_probs=130.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec---CCCCeEEeeCCcccccCCCCCCCcccccccccccch
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ---ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAP  154 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~---~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aP  154 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||+.   .++.+||+|||+|+....  .......+||+.|+||
T Consensus       101 ~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~--~~~~~~~~GT~~y~AP  178 (307)
T d1a06a_         101 KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAP  178 (307)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC--------------------CTTSCH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccC--CCeeeeeeeCccccCc
Confidence            35689999999999999999999999999999999999995   478999999999987543  2345567899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. |+.++||||+||++|+|++|.+||.+.+....+..|......+                            .
T Consensus       179 E~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~----------------------------~  229 (307)
T d1a06a_         179 EVLAQKP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF----------------------------D  229 (307)
T ss_dssp             HHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCC----------------------------C
T ss_pred             HHHcCCC-CCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCC----------------------------C
Confidence            9998876 9999999999999999999999999988887777765422111                            1


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ...+...++.+.+||.+||..||.+|||++|+|+||||.+
T Consensus       230 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         230 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence            1234568899999999999999999999999999999975

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-40  Score=301.34  Aligned_cols=163  Identities=23%  Similarity=0.312  Sum_probs=130.9

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccC-----ccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccc
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDG-----YQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYY  151 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~-----iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y  151 (395)
                      ....+++..+..++.||+.||.|||+.|     ||||||||+|||++.++.+||+|||+|+..... ....+..+||+.|
T Consensus       102 ~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~-~~~~~~~~gt~~Y  180 (269)
T d2java1         102 ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYY  180 (269)
T ss_dssp             HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC------------CCCSC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccC-CCccccCCCCccc
Confidence            3457899999999999999999999876     999999999999999999999999999876532 2334567899999


Q ss_pred             cchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCcc
Q psy2865         152 RAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSL  231 (395)
Q Consensus       152 ~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (395)
                      +|||++.+.. |+.++|||||||++|||++|.+||.+.+..+.+..|....                             
T Consensus       181 ~APE~l~~~~-~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~-----------------------------  230 (269)
T d2java1         181 MSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-----------------------------  230 (269)
T ss_dssp             CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-----------------------------
T ss_pred             CCHHHHcCCC-CChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCC-----------------------------
Confidence            9999998876 9999999999999999999999999988877776664310                             


Q ss_pred             chhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcc
Q psy2865         232 SSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYL  272 (395)
Q Consensus       232 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f  272 (395)
                        ...++...++.+.+||.+||..||.+|||++|+|+|||+
T Consensus       231 --~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         231 --FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             --CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence              112445678999999999999999999999999999996

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-40  Score=297.33  Aligned_cols=163  Identities=19%  Similarity=0.184  Sum_probs=134.5

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccC--ccccCCCCCceeec-CCCCeEEeeCCcccccCCCCCCCcccccccccccc
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDG--YQARQPTRQLVMYQ-ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRA  153 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDlkp~Nil~~-~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a  153 (395)
                      +...+++..++.++.||+.||.|||+.|  |+||||||+|||++ .++.+||+|||+|+...   .......+||+.|+|
T Consensus       105 ~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~---~~~~~~~~GT~~Y~a  181 (270)
T d1t4ha_         105 RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---ASFAKAVIGTPEFMA  181 (270)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC---TTSBEESCSSCCCCC
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceecc---CCccCCcccCccccC
Confidence            3457889999999999999999999998  99999999999997 57899999999998643   233456789999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+ . |+.++||||+||++|||++|.+||.+......+...+.. +.++                           
T Consensus       182 PE~~~~-~-~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~-~~~~---------------------------  231 (270)
T d1t4ha_         182 PEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKP---------------------------  231 (270)
T ss_dssp             GGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCC---------------------------
T ss_pred             HHHhCC-C-CCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHc-CCCC---------------------------
Confidence            999865 3 899999999999999999999999876554443332210 1111                           


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                       ..++...++++.+||.+||..||++||||+|+|+||||.
T Consensus       232 -~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         232 -ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             -GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             -cccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence             123456788999999999999999999999999999994

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.3e-40  Score=309.56  Aligned_cols=168  Identities=21%  Similarity=0.204  Sum_probs=141.2

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      +...+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+....   ......+||+.|+|||+
T Consensus       100 ~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~---~~~~~~~GT~~y~APE~  176 (364)
T d1omwa3         100 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK---KKPHASVGTHGYMAPEV  176 (364)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSS---SCCCSCCSCGGGCCHHH
T ss_pred             hcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCC---CcccccccccccchhHH
Confidence            346788899999999999999999999999999999999999999999999999997643   23456689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+...|+.++|||||||++|+|++|.+||.+.+..+....+.....                             ....
T Consensus       177 ~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~-----------------------------~~~~  227 (364)
T d1omwa3         177 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-----------------------------MAVE  227 (364)
T ss_dssp             HSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSS-----------------------------CCCC
T ss_pred             hhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc-----------------------------CCCC
Confidence            97655589999999999999999999999988765444333222111                             1123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcC-----HHHHHcCCccccCc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRIS-----VNSALCHPYLDEGR  276 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~  276 (395)
                      ++...++.+.+||.+||..||.+|||     |+++|+||||.+..
T Consensus       228 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~  272 (364)
T d1omwa3         228 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  272 (364)
T ss_dssp             CCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCC
T ss_pred             CCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCC
Confidence            45678999999999999999999999     89999999998743

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.8e-40  Score=303.07  Aligned_cols=164  Identities=18%  Similarity=0.264  Sum_probs=143.4

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      .....+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+...    ...+..+||+.|+|||
T Consensus        96 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~----~~~~~~~Gt~~Y~APE  171 (316)
T d1fota_          96 RKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYTLCGTPDYIAPE  171 (316)
T ss_dssp             HHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECS----SCBCCCCSCTTTCCHH
T ss_pred             cccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEec----cccccccCcccccCHH
Confidence            345567778888999999999999999999999999999999999999999999999753    2345679999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++||||+||++|+|++|.+||.+.+..+.+..|...                                ..
T Consensus       172 ~l~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--------------------------------~~  218 (316)
T d1fota_         172 VVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA--------------------------------EL  218 (316)
T ss_dssp             HHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC--------------------------------CC
T ss_pred             HHcCCC-CCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC--------------------------------CC
Confidence            998876 899999999999999999999999999888877776541                                12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCccccCc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDEGR  276 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~~~  276 (395)
                      .+++..++.+.+||.+||..||.+|+     |++++|+||||.+..
T Consensus       219 ~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~  264 (316)
T d1fota_         219 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  264 (316)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCC
Confidence            34567889999999999999999996     999999999998743

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.6e-40  Score=303.80  Aligned_cols=162  Identities=19%  Similarity=0.172  Sum_probs=139.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      .+.+++..++.++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+...     .....+||+.|+|||++
T Consensus       109 ~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~-----~~~~~~GT~~Y~APE~~  183 (309)
T d1u5ra_         109 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANSFVGTPYWMAPEVI  183 (309)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS-----SBCCCCSCGGGCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccC-----CCCccccCccccCHHHH
Confidence            4578999999999999999999999999999999999999999999999999998643     23456899999999999


Q ss_pred             hcC--CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGA--RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~--~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+.  ..|+.++|||||||++|||++|.+||.+.+..+.+..+....-.                              .
T Consensus       184 ~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~------------------------------~  233 (309)
T d1u5ra_         184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP------------------------------A  233 (309)
T ss_dssp             TTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC------------------------------C
T ss_pred             hccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC------------------------------C
Confidence            753  34899999999999999999999999998887777766542100                              0


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...++.+.+||.+||..||.+||||+|+|+||||..
T Consensus       234 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~  272 (309)
T d1u5ra_         234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (309)
T ss_dssp             CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcC
Confidence            122456889999999999999999999999999999964

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.9e-40  Score=308.66  Aligned_cols=166  Identities=22%  Similarity=0.308  Sum_probs=143.4

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC--CCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA--TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~--~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..++.++.||+.||.|||+.|||||||||+|||++.  ++.+||+|||+|+....  .......+||+.|||||+
T Consensus       119 ~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~--~~~~~~~~gT~~Y~aPEv  196 (350)
T d1koaa2         119 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP--KQSVKVTTGTAEFAAPEV  196 (350)
T ss_dssp             SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT--TSCEEEECSCTTTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccc--ccccceecCcccccCHHH
Confidence            46899999999999999999999999999999999999964  67899999999987653  234456789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++||||+||++|+|++|.+||.+.+..+.+..|......++.                            .
T Consensus       197 ~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~----------------------------~  247 (350)
T d1koaa2         197 AEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD----------------------------S  247 (350)
T ss_dssp             HHTCC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCC----------------------------G
T ss_pred             HcCCC-CChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc----------------------------c
Confidence            99876 899999999999999999999999999988888887653322211                            2


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccccC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDEG  275 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~~  275 (395)
                      ....+++.+.+||.+||..||.+|||++|+|+||||...
T Consensus       248 ~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         248 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG  286 (350)
T ss_dssp             GGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred             cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            234578899999999999999999999999999999763

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=6.9e-40  Score=307.21  Aligned_cols=166  Identities=22%  Similarity=0.258  Sum_probs=144.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec--CCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ--ATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~--~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..++.++.||+.||.|||+.|||||||||+|||++  .++.+||+|||+|.....  .......+||+.|+|||
T Consensus       121 ~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~--~~~~~~~~gt~~y~aPE  198 (352)
T d1koba_         121 DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFAAPE  198 (352)
T ss_dssp             TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT--TSCEEEECSSGGGCCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCC--CCceeeccCcccccCHH
Confidence            34589999999999999999999999999999999999998  578999999999998653  23455678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++||||+||++|+|++|.+||.+.+..+++..|......++                            .
T Consensus       199 ~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------~  249 (352)
T d1koba_         199 IVDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD----------------------------E  249 (352)
T ss_dssp             HHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC----------------------------S
T ss_pred             HHcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----------------------------c
Confidence            998876 89999999999999999999999999998888888765332221                            1


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...++.+.+||.+||..||.+|||+.|+|+||||..
T Consensus       250 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         250 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            234568899999999999999999999999999999976

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-40  Score=308.49  Aligned_cols=194  Identities=32%  Similarity=0.541  Sum_probs=149.1

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||+++....  ....+..++|+.|+|||++
T Consensus       113 ~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~--~~~~~~~~~t~~y~aPE~l  190 (355)
T d2b1pa1         113 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVI  190 (355)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCTTCCHHHH
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccc--ccccccccccccccChhhh
Confidence            35688999999999999999999999999999999999999999999999999987543  3345667899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccC-Cccchh--
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKS-QSLSSL--  234 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--  234 (395)
                      .+.. |+.++||||+||++|+|++|.+||.+.+...++..|...++.+.++.|.................. ......  
T Consensus       191 ~~~~-~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (355)
T d2b1pa1         191 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP  269 (355)
T ss_dssp             TTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSC
T ss_pred             cCCC-CCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccc
Confidence            9875 899999999999999999999999999999999999999999999888766443322221111110 000000  


Q ss_pred             -------hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 -------YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 -------~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                             .......++++.|||.+||.+||++||||+|+|+||||+.
T Consensus       270 ~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         270 DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             GGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             cccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                   0111234678999999999999999999999999999975

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-40  Score=296.80  Aligned_cols=157  Identities=17%  Similarity=0.239  Sum_probs=134.5

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-CCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      +...+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+|+...   ....+..+||+.|+|||
T Consensus       103 ~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~---~~~~~~~~GT~~y~aPE  179 (273)
T d1xwsa_         103 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPE  179 (273)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC---SSCBCCCCSCGGGSCHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecc---cccccccccCCCcCCHH
Confidence            3467899999999999999999999999999999999999985 4789999999998753   23456678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+...++.++||||+||++|+|++|.+||.+.+      .+..                                ...
T Consensus       180 ~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~--------------------------------~~~  221 (273)
T d1xwsa_         180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIR--------------------------------GQV  221 (273)
T ss_dssp             HHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHH--------------------------------CCC
T ss_pred             HHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhh--------------------------------ccc
Confidence            99887756788999999999999999999997632      1211                                112


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .++...++++.+||.+||..||.+|||++|+|+||||.+
T Consensus       222 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  260 (273)
T d1xwsa_         222 FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD  260 (273)
T ss_dssp             CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence            344678899999999999999999999999999999976

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-39  Score=293.28  Aligned_cols=166  Identities=20%  Similarity=0.225  Sum_probs=143.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC----CeEEeeCCcccccCCCCCCCcccccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY----SSKICDFGLARVEEPDPNKAMTQEVVTQYYRA  153 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~----~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a  153 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++    .+||+|||+|.....  .......+||+.|+|
T Consensus       107 ~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~--~~~~~~~~~t~~y~A  184 (293)
T d1jksa_         107 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GNEFKNIFGTPEFVA  184 (293)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT--SCBCSCCCCCGGGCC
T ss_pred             ccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC--CccccccCCCCcccC
Confidence            35799999999999999999999999999999999999998766    499999999987643  234456689999999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      ||++.+.. |+.++||||+||++|+|++|.+||.+.+..+.+..|......++.                          
T Consensus       185 PE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~--------------------------  237 (293)
T d1jksa_         185 PEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED--------------------------  237 (293)
T ss_dssp             HHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCH--------------------------
T ss_pred             HHHHcCCC-CCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCc--------------------------
Confidence            99998865 899999999999999999999999999988888877653322221                          


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        ..++..++.+.+||.+||..||.+|||++|+|+||||..
T Consensus       238 --~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  276 (293)
T d1jksa_         238 --EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  276 (293)
T ss_dssp             --HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC
T ss_pred             --hhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence              233567889999999999999999999999999999975

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-39  Score=298.33  Aligned_cols=165  Identities=26%  Similarity=0.302  Sum_probs=143.9

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..... ....+..+||+.|+|||+
T Consensus        96 ~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~  174 (320)
T d1xjda_          96 SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNTFCGTPDYIAPEI  174 (320)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBCCCCSCGGGCCHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccc-cccccccCCCCCcCCHHH
Confidence            3456888999999999999999999999999999999999999999999999999865432 334556789999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++||||+||++|+|++|..||.+.+....+..|..  +                              ...
T Consensus       175 ~~~~~-~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~------------------------------~~~  221 (320)
T d1xjda_         175 LLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM--D------------------------------NPF  221 (320)
T ss_dssp             HTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--C------------------------------CCC
T ss_pred             HcCCC-CCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc--C------------------------------CCC
Confidence            99876 89999999999999999999999999988877777643  1                              123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHH-HHHcCCccccC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVN-SALCHPYLDEG  275 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~-e~L~Hp~f~~~  275 (395)
                      ++...++.+.+||.+||..||.+|||+. ++++||||.+.
T Consensus       222 ~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         222 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            4456789999999999999999999995 89999999863

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=8.5e-39  Score=298.13  Aligned_cols=193  Identities=22%  Similarity=0.356  Sum_probs=149.0

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCC-CeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATY-SSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~-~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      .+++..++.++.||+.||.|||++|||||||||+|||++.++ .+||+|||+|+.....  ......++|+.|+|||++.
T Consensus       125 ~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~--~~~~~~~~t~~y~aPE~~~  202 (328)
T d3bqca1         125 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLV  202 (328)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT--CCCCSCCSCGGGCCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCC--CcccccccCccccCccccc
Confidence            588999999999999999999999999999999999998655 5999999999876532  3456678999999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCCCCC-CChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcc---ccCCccchh
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRILFQA-QSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQT---RKSQSLSSL  234 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~f~~-~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  234 (395)
                      +...|+.++||||+||++|+|++|..||.. .+..++...|...+|.+....+...............   .....+...
T Consensus       203 ~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (328)
T d3bqca1         203 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF  282 (328)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGG
T ss_pred             CCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhc
Confidence            877689999999999999999999998865 4566788888888887655544332211110000000   000011111


Q ss_pred             --hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         235 --YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       235 --~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        .......++++.|||.+||.+||.+||||+|+|+||||.+
T Consensus       283 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~  324 (328)
T d3bqca1         283 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  324 (328)
T ss_dssp             CCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             ccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence              1123457899999999999999999999999999999975

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.7e-38  Score=288.22  Aligned_cols=167  Identities=20%  Similarity=0.275  Sum_probs=142.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+....  ....+..+||+.|+|||++
T Consensus       104 ~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~--~~~~~~~~gt~~y~~PE~~  181 (277)
T d1phka_         104 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLREVCGTPSYLAPEII  181 (277)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT--TCCBCCCCSCGGGCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC--CCceeeeeccCCCCCHHHh
Confidence            45799999999999999999999999999999999999999999999999999997653  2345667899999999998


Q ss_pred             hcC-----CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         158 MGA-----RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       158 ~~~-----~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      .+.     ..|+.++||||+||++|+|++|.+||.+.+..+.+..|...--.++                          
T Consensus       182 ~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~--------------------------  235 (277)
T d1phka_         182 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG--------------------------  235 (277)
T ss_dssp             HHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--------------------------
T ss_pred             hccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCC--------------------------
Confidence            642     2368899999999999999999999999998887777754211111                          


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                        .......++++.+||.+||..||.+|||++|+|+||||..
T Consensus       236 --~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         236 --SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             --TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             --CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence              1123467899999999999999999999999999999964

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-39  Score=300.29  Aligned_cols=169  Identities=21%  Similarity=0.305  Sum_probs=133.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC---CCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA---TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~---~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      ..|++..++.++.||+.||.|||+.||+||||||+|||++.   .+.+||+|||+|+....  .......+||+.|+|||
T Consensus       106 ~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~--~~~~~~~~gt~~y~aPE  183 (335)
T d2ozaa1         106 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPYYVAPE  183 (335)
T ss_dssp             CCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC--CCCCCCCSCCCSSCCCC
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccC--CCccccccCCcccCCcH
Confidence            46899999999999999999999999999999999999985   56799999999987653  23455678999999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      ++.+.. |+.++||||+||++|+|++|.+||.+.+....+..+........                        .....
T Consensus       184 ~~~~~~-y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~------------------------~~~~~  238 (335)
T d2ozaa1         184 VLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ------------------------YEFPN  238 (335)
T ss_dssp             CCCGGG-GSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCS------------------------SSCCT
T ss_pred             HHcCCC-CCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCC------------------------CCCCC
Confidence            998876 99999999999999999999999988776555444432111000                        00000


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ..+...++.+.+||.+||+.||++|||+.|+|+||||..
T Consensus       239 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  277 (335)
T d2ozaa1         239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  277 (335)
T ss_dssp             THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHT
T ss_pred             cccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhC
Confidence            112346889999999999999999999999999999964

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-38  Score=287.40  Aligned_cols=194  Identities=29%  Similarity=0.400  Sum_probs=155.5

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+.+++..++.++.|++.||+|||..||+||||||+|||++.++.+||+|||+|+..... ........+++.|+|||+
T Consensus        94 ~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~~~pe~  172 (292)
T d1unla_          94 CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDV  172 (292)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSC-CSCCCSCCSCGGGCCHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCC-CccceeeccccchhhhhH
Confidence            3457788889999999999999999999999999999999999999999999999976543 233445578899999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCC-CCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~-f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+...++.++||||+||++|||++|..| |.+.+..+++..+....+.+....+.............   .........
T Consensus       173 ~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  249 (292)
T d1unla_         173 LFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP---MYPATTSLV  249 (292)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC---CCCTTCCCT
T ss_pred             hccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccc---cccccchhh
Confidence            98876679999999999999999998876 66777888889998888888776554432221111111   111112233


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      ......++.+.|||.+||++||.+||||+|+|+||||++
T Consensus       250 ~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         250 NVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred             hccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence            455678899999999999999999999999999999975

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-37  Score=289.01  Aligned_cols=165  Identities=22%  Similarity=0.253  Sum_probs=142.2

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC--CCCeEEeeCCcccccCCCCCCCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA--TYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~--~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..++.++.||+.||.|||+.||+||||||+|||++.  .+.+||+|||+++....  .......++|+.|+|||+
T Consensus        97 ~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~--~~~~~~~~~t~~y~ape~  174 (321)
T d1tkia_          97 FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP--GDNFRLLFTAPEYYAPEV  174 (321)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT--TCEEEEEESCGGGSCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcccc--CCcccccccccccccchh
Confidence            36899999999999999999999999999999999999985  45799999999987542  233455689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      +.+.. |+.++||||+||++|+|++|.+||.+.+..+.+..|......++.                            .
T Consensus       175 ~~~~~-~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~----------------------------~  225 (321)
T d1tkia_         175 HQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDE----------------------------E  225 (321)
T ss_dssp             HTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCH----------------------------H
T ss_pred             ccCCC-CCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCh----------------------------h
Confidence            98876 899999999999999999999999999998888888764332222                            1


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                      .++..++.+.+||.+||..||.+|||+.|+|+||||..
T Consensus       226 ~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             hccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            23457889999999999999999999999999999964

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-37  Score=277.71  Aligned_cols=165  Identities=17%  Similarity=0.152  Sum_probs=131.3

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCC-CCCCcccccccccccchhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPD-PNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~-~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ..+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+..... .....+..+||+.|+|||++
T Consensus        99 ~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l  178 (276)
T d1uwha_          99 TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI  178 (276)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHH
Confidence            45888889999999999999999999999999999999999999999999999875432 22344567899999999999


Q ss_pred             hcC--CCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         158 MGA--RHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       158 ~~~--~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      .+.  ..|+.++|||||||++|||+||..||.+.+...++..+....-.++                          .+.
T Consensus       179 ~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p--------------------------~~~  232 (276)
T d1uwha_         179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP--------------------------DLS  232 (276)
T ss_dssp             TTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCC--------------------------CGG
T ss_pred             hcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC--------------------------cch
Confidence            753  2388999999999999999999999998877666555433111110                          122


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+..+++.+.+||.+||..||.+|||+.++++|
T Consensus       233 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             GSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            3456788999999999999999999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-37  Score=283.14  Aligned_cols=171  Identities=20%  Similarity=0.256  Sum_probs=140.9

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchh
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPE  155 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPE  155 (395)
                      +....+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+.+............||+.|+|||
T Consensus       121 ~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe  200 (322)
T d1vzoa_         121 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD  200 (322)
T ss_dssp             HHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHH
T ss_pred             HhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhH
Confidence            34456778888999999999999999999999999999999999999999999999876543334455678999999999


Q ss_pred             hhhcCC-CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGAR-HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~-~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. .++.++||||+||++|+|++|..||.+.+..+....+.....                            ...
T Consensus       201 ~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~----------------------------~~~  252 (322)
T d1vzoa_         201 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL----------------------------KSE  252 (322)
T ss_dssp             HHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH----------------------------HCC
T ss_pred             HhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc----------------------------cCC
Confidence            997654 367899999999999999999999998876666555543110                            011


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCc-----CHHHHHcCCcccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRI-----SVNSALCHPYLDE  274 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~-----ta~e~L~Hp~f~~  274 (395)
                      ..++...++.+.+||.+||..||.+|+     ||+|+|+||||+.
T Consensus       253 ~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         253 PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            234567899999999999999999999     5999999999976

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-37  Score=277.18  Aligned_cols=164  Identities=19%  Similarity=0.224  Sum_probs=137.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..........+...||+.|+|||++.
T Consensus       104 ~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~  183 (272)
T d1qpca_         104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN  183 (272)
T ss_dssp             HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHh
Confidence            45888899999999999999999999999999999999999999999999999986543333445568899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. |+.++|||||||++|||+| |.++|.+.+..+.+..+....                               ....
T Consensus       184 ~~~-~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~-------------------------------~~~~  231 (272)
T d1qpca_         184 YGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-------------------------------RMVR  231 (272)
T ss_dssp             HCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-------------------------------CCCC
T ss_pred             CCC-CCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-------------------------------CCCC
Confidence            765 8999999999999999998 566777777666665554311                               1123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc--CCcccc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC--HPYLDE  274 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~--Hp~f~~  274 (395)
                      +...++.+.+||.+||..||++|||++++++  |+||+.
T Consensus       232 p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            4567889999999999999999999999998  888853

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-37  Score=284.24  Aligned_cols=161  Identities=20%  Similarity=0.154  Sum_probs=133.8

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+........ ..+..+||+.|+|||+
T Consensus       158 ~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~  237 (325)
T d1rjba_         158 LNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES  237 (325)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHH
Confidence            456788889999999999999999999999999999999999999999999999875432222 2345678999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||+| |.+||.+.+....+..++..-.                              ..
T Consensus       238 l~~~~-~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~------------------------------~~  286 (325)
T d1rjba_         238 LFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF------------------------------KM  286 (325)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC------------------------------CC
T ss_pred             HcCCC-CCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC------------------------------CC
Confidence            98876 9999999999999999997 8999998776666665543110                              11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...++.+.+||.+||..||++|||++|+++|
T Consensus       287 ~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         287 DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3456778999999999999999999999999976

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-36  Score=279.08  Aligned_cols=161  Identities=17%  Similarity=0.190  Sum_probs=127.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+....... ...+..+||+.|+|||+
T Consensus       128 ~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~  207 (299)
T d1ywna1         128 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  207 (299)
T ss_dssp             --CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhH
Confidence            45688899999999999999999999999999999999999999999999999986543322 23455689999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||++| .+||.+.+....+..++...                              ...
T Consensus       208 l~~~~-~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~------------------------------~~~  256 (299)
T d1ywna1         208 IFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG------------------------------TRM  256 (299)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT------------------------------CCC
T ss_pred             hhcCC-CCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC------------------------------CCC
Confidence            99876 89999999999999999986 57888776555544433210                              012


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...++.+.+||.+||..||.+|||++|+++|
T Consensus       257 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         257 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3446678999999999999999999999999987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-35  Score=279.45  Aligned_cols=194  Identities=24%  Similarity=0.334  Sum_probs=147.2

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccc-cCccccCCCCCceeecCCCC------eEEeeCCcccccCCCCCCCccccccc
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTI-DGYQARQPTRQLVMYQATYS------SKICDFGLARVEEPDPNKAMTQEVVT  148 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDlkp~Nil~~~~~~------vKl~DFGla~~~~~~~~~~~~~~~~t  148 (395)
                      .....+++..++.++.||+.|+.|||+ .||+||||||+|||++.++.      ++|+|||.|....    ......+||
T Consensus       117 ~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~----~~~~~~~gt  192 (362)
T d1q8ya_         117 YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD----EHYTNSIQT  192 (362)
T ss_dssp             TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETT----BCCCSCCSC
T ss_pred             ccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccc----ccccccccc
Confidence            344566778889999999999999997 89999999999999986553      8999999998743    334556899


Q ss_pred             ccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCC------hHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         149 QYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQS------PVQQLGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       149 ~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~------~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                      +.|+|||++.+.. |+.++||||+||++++|++|.+||.+.+      ..+.+..+...+|.++.+.+............
T Consensus       193 ~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  271 (362)
T d1q8ya_         193 REYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNS  271 (362)
T ss_dssp             GGGCCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC
T ss_pred             ccccChhhccccC-CCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccccccccc
Confidence            9999999999876 8999999999999999999999997653      35677788889999888766543222111110


Q ss_pred             ----hcccc--CCc----cchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCcccc
Q psy2865         223 ----RQTRK--SQS----LSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLDE  274 (395)
Q Consensus       223 ----~~~~~--~~~----~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~~  274 (395)
                          .....  ...    ...........++.+.|||.+||.+||.+||||.|||+||||.+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~  333 (362)
T d1q8ya_         272 RGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  333 (362)
T ss_dssp             --CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             chhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCC
Confidence                00000  000    11122334455788999999999999999999999999999975

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-36  Score=274.49  Aligned_cols=165  Identities=18%  Similarity=0.227  Sum_probs=136.2

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccch
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRAP  154 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~aP  154 (395)
                      +...+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+........  ......||+.|+||
T Consensus       100 ~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~AP  179 (277)
T d1xbba_         100 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP  179 (277)
T ss_dssp             HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCH
T ss_pred             hccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCc
Confidence            3456899999999999999999999999999999999999999999999999999876432221  22345789999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccch
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSS  233 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (395)
                      |++.+.. |+.++|||||||++|||++ |.+||.+.+..+....|....                               
T Consensus       180 E~l~~~~-~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~-------------------------------  227 (277)
T d1xbba_         180 ECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE-------------------------------  227 (277)
T ss_dssp             HHHHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-------------------------------
T ss_pred             hhhcCCC-CCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCC-------------------------------
Confidence            9998876 8999999999999999997 899999988776665554210                               


Q ss_pred             hhccCCCCCHHHHHHHHHccccCCCCCcCHHHH---HcCCccc
Q psy2865         234 LYSLSSQATGEAVHLLVQMLYFDPTKRISVNSA---LCHPYLD  273 (395)
Q Consensus       234 ~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~---L~Hp~f~  273 (395)
                      ....+..+++.+.+||.+||..||.+|||++++   |+|+|++
T Consensus       228 ~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         228 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence            123456678999999999999999999999998   5677764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-36  Score=272.65  Aligned_cols=160  Identities=18%  Similarity=0.217  Sum_probs=126.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.|||||||||+||+++.++.+||+|||+|+..........+...||+.|+|||++
T Consensus       102 ~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l  181 (273)
T d1mp8a_         102 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI  181 (273)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHh
Confidence            45688889999999999999999999999999999999999999999999999987654333445556789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|||++ |.+||.+.+..+.+..|....                               ...
T Consensus       182 ~~~~-~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~-------------------------------~~~  229 (273)
T d1mp8a_         182 NFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------------------------------RLP  229 (273)
T ss_dssp             HHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-------------------------------CCC
T ss_pred             ccCC-CCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------------------------CCC
Confidence            8876 8999999999999999997 899999988887777664311                               123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .++.+++.+.+||.+||..||.+|||+.|++.|
T Consensus       230 ~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         230 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            456788999999999999999999999999876

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-35  Score=269.52  Aligned_cols=165  Identities=19%  Similarity=0.237  Sum_probs=131.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||+|||..||+||||||+|||++.++.+||+|||+|+..........+...||+.|+|||++
T Consensus       107 ~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~  186 (285)
T d1fmka3         107 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA  186 (285)
T ss_dssp             HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHH
T ss_pred             cccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHH
Confidence            45689999999999999999999999999999999999999999999999999987654333444556889999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. ++.++|||||||++|||++ |.++|.+....+.+..+.....                               ..
T Consensus       187 ~~~~-~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~-------------------------------~~  234 (285)
T d1fmka3         187 LYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-------------------------------MP  234 (285)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-------------------------------CC
T ss_pred             hCCC-CCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-------------------------------CC
Confidence            8876 8999999999999999998 5666777777666666643211                               12


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHc--CCcccc
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALC--HPYLDE  274 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~--Hp~f~~  274 (395)
                      .+..++..+.+||.+||..||++|||+++++.  |+||..
T Consensus       235 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         235 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            44667889999999999999999999999987  888864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-36  Score=270.14  Aligned_cols=159  Identities=16%  Similarity=0.181  Sum_probs=122.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+|+..............||+.|+|||++.
T Consensus        96 ~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~  175 (263)
T d1sm2a_          96 GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS  175 (263)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhc
Confidence            45677888899999999999999999999999999999999999999999999876543333444568899999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. |+.++|||||||++|||+| |.++|.+.+....+..|.....                               ...
T Consensus       176 ~~~-~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~-------------------------------~~~  223 (263)
T d1sm2a_         176 FSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------------------------------LYK  223 (263)
T ss_dssp             TCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCC-------------------------------CCC
T ss_pred             CCC-CCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCC-------------------------------CCC
Confidence            876 9999999999999999998 6777877777666666643211                               123


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      +...++.+.+||.+||..||++|||++++++|
T Consensus       224 p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         224 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            35568899999999999999999999999986

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-35  Score=264.99  Aligned_cols=160  Identities=14%  Similarity=0.206  Sum_probs=136.5

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..............+|+.|+|||++
T Consensus        94 ~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~  173 (258)
T d1k2pa_          94 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL  173 (258)
T ss_dssp             GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHH
T ss_pred             ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHh
Confidence            34566777788999999999999999999999999999999999999999999987654433445557899999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|||+| |..||.+.+..+....|.....                               ..
T Consensus       174 ~~~~-~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~-------------------------------~~  221 (258)
T d1k2pa_         174 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-------------------------------LY  221 (258)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCC-------------------------------CC
T ss_pred             cCCC-CCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCC-------------------------------CC
Confidence            8876 8999999999999999998 8999999988777776654221                               12


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...++.+.+||.+||..||++|||++++|+|
T Consensus       222 ~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         222 RPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            345677899999999999999999999999987

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-35  Score=272.28  Aligned_cols=160  Identities=17%  Similarity=0.213  Sum_probs=124.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC----CCcccccccccccc
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN----KAMTQEVVTQYYRA  153 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~----~~~~~~~~t~~y~a  153 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......    .......+|+.|+|
T Consensus       122 ~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~a  201 (299)
T d1jpaa_         122 DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA  201 (299)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccC
Confidence            34688888999999999999999999999999999999999999999999999987543221    11223467899999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ||++.+.. |+.++|||||||++|||+| |.+||.+.+..+.+..|.....                             
T Consensus       202 PE~~~~~~-~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~-----------------------------  251 (299)
T d1jpaa_         202 PEAIQYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR-----------------------------  251 (299)
T ss_dssp             HHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-----------------------------
T ss_pred             HHHHhcCC-CCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-----------------------------
Confidence            99998875 8999999999999999997 8999999888777666643211                             


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                        ...+...+..+.+||.+||..||.+|||+.|++++
T Consensus       252 --~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         252 --LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             --CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence              12345678899999999999999999999998864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-36  Score=271.49  Aligned_cols=163  Identities=17%  Similarity=0.189  Sum_probs=137.9

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPEv  156 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......  ...+..+||+.|+|||+
T Consensus       104 ~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~  183 (285)
T d1u59a_         104 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC  183 (285)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHH
Confidence            4688888999999999999999999999999999999999999999999999997654222  22334578999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||+| |.+||.+.+..+.+..|....                               ..
T Consensus       184 ~~~~~-~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~-------------------------------~~  231 (285)
T d1u59a_         184 INFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-------------------------------RM  231 (285)
T ss_dssp             HHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC-------------------------------CC
T ss_pred             HhCCC-CCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            98876 8999999999999999997 999999888777666654311                               12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHH---HcCCccc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSA---LCHPYLD  273 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~---L~Hp~f~  273 (395)
                      ..++.+++.+.+||.+||..||++|||+.++   |+|+|++
T Consensus       232 ~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         232 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            3456788999999999999999999999877   6788885

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-35  Score=270.90  Aligned_cols=158  Identities=18%  Similarity=0.221  Sum_probs=128.7

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhhh
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEILM  158 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl~  158 (395)
                      ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+..........+...||+.|+|||++.
T Consensus       110 ~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~  189 (287)
T d1opja_         110 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA  189 (287)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHc
Confidence            56788888999999999999999999999999999999999999999999999976543333344456889999999998


Q ss_pred             cCCCCCccchHHhHHHHHHHHHcCCCC-CCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhcc
Q psy2865         159 GARHYSAAVDVWSVGCIFAELLGRRIL-FQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSL  237 (395)
Q Consensus       159 ~~~~~~~~~DiWSlG~il~ell~g~~~-f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (395)
                      +.. |+.++|||||||++|||++|..| |.+.+.......+....                               ....
T Consensus       190 ~~~-~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~-------------------------------~~~~  237 (287)
T d1opja_         190 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-------------------------------RMER  237 (287)
T ss_dssp             HCC-CSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-------------------------------CCCC
T ss_pred             CCC-CCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCC-------------------------------CCCC
Confidence            876 99999999999999999996555 44544444333332110                               1134


Q ss_pred             CCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         238 SSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       238 ~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      +...++.+.+||.+||..||.+|||++++++
T Consensus       238 ~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            4678899999999999999999999999976

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.1e-35  Score=268.35  Aligned_cols=168  Identities=21%  Similarity=0.245  Sum_probs=131.0

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC--CCCcccccccccccch
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP--NKAMTQEVVTQYYRAP  154 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~--~~~~~~~~~t~~y~aP  154 (395)
                      +.+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++.......  .......+||+.|+||
T Consensus       104 ~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aP  183 (277)
T d1o6ya_         104 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP  183 (277)
T ss_dssp             HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCH
Confidence            44578999999999999999999999999999999999999999999999999987653321  2244567899999999


Q ss_pred             hhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         155 EILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       155 Evl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      |++.+.. |+.++||||+||++|+|+||.+||.+.+..+.+..+......+                            .
T Consensus       184 E~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~----------------------------~  234 (277)
T d1o6ya_         184 EQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP----------------------------P  234 (277)
T ss_dssp             HHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC----------------------------G
T ss_pred             HHHcCCC-CCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCC----------------------------C
Confidence            9998876 8999999999999999999999999988877776665421111                            1


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCccc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPYLD  273 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~f~  273 (395)
                      .......++.+.+||.+||..||.+||+..+.|.|+|..
T Consensus       235 ~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         235 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            234467889999999999999999999555555677763

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-35  Score=272.33  Aligned_cols=163  Identities=16%  Similarity=0.141  Sum_probs=133.6

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC-Ccccccccccccchh
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK-AMTQEVVTQYYRAPE  155 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~-~~~~~~~t~~y~aPE  155 (395)
                      +...+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+|+........ ......||+.|+|||
T Consensus       104 ~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE  183 (317)
T d1xkka_         104 HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE  183 (317)
T ss_dssp             TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHH
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChH
Confidence            3556788888999999999999999999999999999999999999999999999976543222 234457899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. |+.++|||||||++|||+| |.+||.+.+..+....+....                               .
T Consensus       184 ~l~~~~-~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~-------------------------------~  231 (317)
T d1xkka_         184 SILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-------------------------------R  231 (317)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC-------------------------------C
T ss_pred             HHhcCC-CChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-------------------------------C
Confidence            998876 9999999999999999998 899999887766655554311                               1


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcCCc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALCHPY  271 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~Hp~  271 (395)
                      ...+..+++.+.+||.+||..||.+|||+.|++.|..
T Consensus       232 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~  268 (317)
T d1xkka_         232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS  268 (317)
T ss_dssp             CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHH
Confidence            1234567889999999999999999999999998843

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-34  Score=262.68  Aligned_cols=159  Identities=20%  Similarity=0.262  Sum_probs=122.4

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC--CCcccccccccccchh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN--KAMTQEVVTQYYRAPE  155 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~--~~~~~~~~t~~y~aPE  155 (395)
                      ...+++..+..++.||+.|+.|||+.||+||||||+|||++.++.+||+|||+|+.......  .......||+.|+|||
T Consensus       104 ~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE  183 (283)
T d1mqba_         104 DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE  183 (283)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHH
T ss_pred             cccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHH
Confidence            35678888889999999999999999999999999999999999999999999987543222  1233457899999999


Q ss_pred             hhhcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchh
Q psy2865         156 ILMGARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSL  234 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (395)
                      ++.+.. |+.++|||||||++|||++| .++|.+.+..+.+..+.....                               
T Consensus       184 ~l~~~~-~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~-------------------------------  231 (283)
T d1mqba_         184 AISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR-------------------------------  231 (283)
T ss_dssp             HHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-------------------------------
T ss_pred             HHccCC-CCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCC-------------------------------
Confidence            998875 99999999999999999985 555666665555554432111                               


Q ss_pred             hccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         235 YSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       235 ~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ...+...+..+.+||.+||..||++|||+.++++
T Consensus       232 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         232 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            1234567788999999999999999999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-34  Score=258.85  Aligned_cols=162  Identities=16%  Similarity=0.140  Sum_probs=134.4

Q ss_pred             HHHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCC--Ccccccccccccc
Q psy2865          76 EREKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNK--AMTQEVVTQYYRA  153 (395)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~--~~~~~~~t~~y~a  153 (395)
                      .+.+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+........  ..+...+|..|+|
T Consensus       103 ~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~a  182 (273)
T d1u46a_         103 KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA  182 (273)
T ss_dssp             HHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCC
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCC
Confidence            44567999999999999999999999999999999999999999999999999999976543221  2234467889999


Q ss_pred             hhhhhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccc
Q psy2865         154 PEILMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLS  232 (395)
Q Consensus       154 PEvl~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (395)
                      ||++.+.. |+.++|||||||++|||+| |.+||.+.+..+.+..|....                              
T Consensus       183 PE~~~~~~-~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~------------------------------  231 (273)
T d1u46a_         183 PESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG------------------------------  231 (273)
T ss_dssp             HHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC------------------------------
T ss_pred             HHHHhCCC-CCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCC------------------------------
Confidence            99999876 8999999999999999997 899999999888777765311                              


Q ss_pred             hhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         233 SLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       233 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .....+...++.+.+||.+||..||.+|||+.+++.
T Consensus       232 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            011344677889999999999999999999999863

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=5.3e-34  Score=262.06  Aligned_cols=159  Identities=18%  Similarity=0.183  Sum_probs=132.0

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCC-CCCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDP-NKAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~-~~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||+|||+.|||||||||+|||++.++.+||+|||+|+...... ....+..++|+.|+|||+
T Consensus       134 ~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~  213 (301)
T d1lufa_         134 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES  213 (301)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHH
Confidence            3457888899999999999999999999999999999999999999999999998654322 223345678999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||++| .+||.+.+..+.+..+.+..                               ..
T Consensus       214 ~~~~~-~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~-------------------------------~~  261 (301)
T d1lufa_         214 IFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN-------------------------------IL  261 (301)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-------------------------------CC
T ss_pred             HccCC-CChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            99876 99999999999999999988 47898888887777664311                               12


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+..+++.+.+||.+||..||.+|||+.|+++
T Consensus       262 ~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         262 ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            345677889999999999999999999999965

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-33  Score=257.60  Aligned_cols=159  Identities=20%  Similarity=0.199  Sum_probs=134.3

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.||.|||+.|||||||||+|||++.++.+||+|||+++....... ......++|+.|+|||+
T Consensus       129 ~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  208 (299)
T d1fgka_         129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEA  208 (299)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhH
Confidence            45688999999999999999999999999999999999999999999999999987643322 23455688999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. |+.++|||||||++|||++ |.+||.+.+....+..+....                               ..
T Consensus       209 l~~~~-y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~-------------------------------~~  256 (299)
T d1fgka_         209 LFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-------------------------------RM  256 (299)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-------------------------------CC
T ss_pred             hcCCC-CCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCC-------------------------------CC
Confidence            98876 9999999999999999997 799998877665555443211                               11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+||.+||..||++||||.|+|+
T Consensus       257 ~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         257 DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            345677899999999999999999999999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-33  Score=252.02  Aligned_cols=156  Identities=14%  Similarity=0.157  Sum_probs=126.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+++....    ......+|..|+|||++
T Consensus        97 ~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~----~~~~~~~~~~y~aPE~l  172 (262)
T d1byga_          97 RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEAL  172 (262)
T ss_dssp             HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCC----CCccccccccCCChHHH
Confidence            34688999999999999999999999999999999999999999999999999986432    23445788999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|||+| |.+||.+.+..+.+..|...                               ....
T Consensus       173 ~~~~-~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~-------------------------------~~~~  220 (262)
T d1byga_         173 REKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-------------------------------YKMD  220 (262)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-------------------------------CCCC
T ss_pred             hCCC-CChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-------------------------------CCCC
Confidence            8876 8999999999999999997 79999888777666665321                               1123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ++...++.+.+||.+||..||.+|||+.+++++
T Consensus       221 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            456778999999999999999999999999874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.8e-33  Score=258.45  Aligned_cols=173  Identities=12%  Similarity=0.054  Sum_probs=131.7

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeec---CCCCeEEeeCCcccccCCCCC------CCcccccc
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQ---ATYSSKICDFGLARVEEPDPN------KAMTQEVV  147 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~---~~~~vKl~DFGla~~~~~~~~------~~~~~~~~  147 (395)
                      ....+++..+..++.|++.||.|||+.|||||||||+|||++   .+..++|+|||+|+.......      ......+|
T Consensus        96 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~g  175 (299)
T d1ckia_          96 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG  175 (299)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCC
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCC
Confidence            345789999999999999999999999999999999999876   456799999999997643211      22345689


Q ss_pred             cccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhcccc
Q psy2865         148 TQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRK  227 (395)
Q Consensus       148 t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  227 (395)
                      |+.|+|||++.+.. |+.++|||||||++|||++|.+||.+.........+......                ..     
T Consensus       176 t~~y~aPE~~~~~~-~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~----------------~~-----  233 (299)
T d1ckia_         176 TARYASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK----------------KM-----  233 (299)
T ss_dssp             CSSSCCHHHHTTBC-CCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHH----------------HH-----
T ss_pred             CccccCHHHHhCCC-CCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcc----------------cC-----
Confidence            99999999999876 899999999999999999999999887654443333221000                00     


Q ss_pred             CCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHH---HHHcCCcccc
Q psy2865         228 SQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVN---SALCHPYLDE  274 (395)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~---e~L~Hp~f~~  274 (395)
                         ...........++++.+||..||..||++||+++   ++|+|+|...
T Consensus       234 ---~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~  280 (299)
T d1ckia_         234 ---STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  280 (299)
T ss_dssp             ---HSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ---CCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence               0011223467889999999999999999999987   5577877643

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.8e-33  Score=254.67  Aligned_cols=160  Identities=19%  Similarity=0.182  Sum_probs=132.7

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEv  156 (395)
                      ...+++..+..++.||+.|+.|||+.|||||||||+|||++.++.+||+|||+++....... ...+..+||+.|+|||+
T Consensus       139 ~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~  218 (311)
T d1t46a_         139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES  218 (311)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHH
Confidence            44678888999999999999999999999999999999999999999999999997654322 23345688999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHc-CCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLG-RRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~-g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|||+| |.++|.+.+....+..++..- .                             ..
T Consensus       219 ~~~~~-~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~-~-----------------------------~~  267 (311)
T d1t46a_         219 IFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG-F-----------------------------RM  267 (311)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHT-C-----------------------------CC
T ss_pred             hcCCC-CCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-C-----------------------------CC
Confidence            98765 8999999999999999998 788888877766665554311 0                             01


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      ..+...++.+.+||.+||..||.+|||++++|+
T Consensus       268 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         268 LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            233557889999999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.7e-33  Score=256.57  Aligned_cols=158  Identities=19%  Similarity=0.192  Sum_probs=129.9

Q ss_pred             HhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccchhhh
Q psy2865          78 EKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRAPEIL  157 (395)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~aPEvl  157 (395)
                      ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.....  .......||..|+|||++
T Consensus       121 ~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~l  198 (309)
T d1fvra_         121 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESL  198 (309)
T ss_dssp             SCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEE--CCC----CCTTTCCHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEcccccccccccc--ccccceecCCcccchHHh
Confidence            355777888899999999999999999999999999999999999999999999865422  222345789999999999


Q ss_pred             hcCCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhc
Q psy2865         158 MGARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYS  236 (395)
Q Consensus       158 ~~~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (395)
                      .+.. |+.++|||||||++|||++| .+||.+.+..+.+..|...                               ....
T Consensus       199 ~~~~-~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~-------------------------------~~~~  246 (309)
T d1fvra_         199 NYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-------------------------------YRLE  246 (309)
T ss_dssp             HHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-------------------------------CCCC
T ss_pred             ccCC-CCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc-------------------------------CCCC
Confidence            8876 89999999999999999986 5678887776665554321                               0123


Q ss_pred             cCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         237 LSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       237 ~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      .+...++.+.+||.+||..||++|||+.++++|
T Consensus       247 ~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         247 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            445678999999999999999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-32  Score=252.89  Aligned_cols=162  Identities=19%  Similarity=0.236  Sum_probs=134.9

Q ss_pred             hcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC-CCcccccccccccchhhhhc
Q psy2865          81 RSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN-KAMTQEVVTQYYRAPEILMG  159 (395)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~-~~~~~~~~t~~y~aPEvl~~  159 (395)
                      ++...+..++.|++.||.|||..+|+||||||+|||++.++.+||+|||+|+....... ...+..++|+.|+|||++.+
T Consensus       130 ~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~  209 (308)
T d1p4oa_         130 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  209 (308)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHcc
Confidence            45666788999999999999999999999999999999999999999999986543221 22344578999999999988


Q ss_pred             CCCCCccchHHhHHHHHHHHHcC-CCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhhccC
Q psy2865         160 ARHYSAAVDVWSVGCIFAELLGR-RILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLYSLS  238 (395)
Q Consensus       160 ~~~~~~~~DiWSlG~il~ell~g-~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (395)
                      .. |+.++|||||||++|||+|| .+||.+.+....+..|.+..                               ....+
T Consensus       210 ~~-~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~-------------------------------~~~~p  257 (308)
T d1p4oa_         210 GV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-------------------------------LLDKP  257 (308)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-------------------------------CCCCC
T ss_pred             CC-CCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCC-------------------------------CCCCc
Confidence            76 89999999999999999988 58898888877777665311                               12234


Q ss_pred             CCCCHHHHHHHHHccccCCCCCcCHHHHHc------CCcccc
Q psy2865         239 SQATGEAVHLLVQMLYFDPTKRISVNSALC------HPYLDE  274 (395)
Q Consensus       239 ~~~~~~~~dll~~mL~~dP~~R~ta~e~L~------Hp~f~~  274 (395)
                      ..+++.+.+||.+||..||++|||+.++++      +|+|..
T Consensus       258 ~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence            567889999999999999999999999987      777754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.1e-32  Score=247.75  Aligned_cols=158  Identities=15%  Similarity=0.147  Sum_probs=124.2

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccccccccchhh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVVTQYYRAPEI  156 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~t~~y~aPEv  156 (395)
                      .+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++.......   ...+...||+.|+|||+
T Consensus       126 ~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  205 (311)
T d1r0pa_         126 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES  205 (311)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHH
T ss_pred             cchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHH
Confidence            444556678999999999999999999999999999999999999999999987543221   22334578999999999


Q ss_pred             hhcCCCCCccchHHhHHHHHHHHHcCCCCCCCC-ChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhhhccccCCccchhh
Q psy2865         157 LMGARHYSAAVDVWSVGCIFAELLGRRILFQAQ-SPVQQLGLITDLLGTPTPEEMRHACDGAKCHMLRQTRKSQSLSSLY  235 (395)
Q Consensus       157 l~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~-~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (395)
                      +.+.. ++.++|||||||++|||++|..||... +..+....+..  |.                             ..
T Consensus       206 ~~~~~-~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~--g~-----------------------------~~  253 (311)
T d1r0pa_         206 LQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--GR-----------------------------RL  253 (311)
T ss_dssp             HHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHT--TC-----------------------------CC
T ss_pred             HhcCC-CCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHc--CC-----------------------------CC
Confidence            98875 899999999999999999976666544 33333333322  10                             11


Q ss_pred             ccCCCCCHHHHHHHHHccccCCCCCcCHHHHHcC
Q psy2865         236 SLSSQATGEAVHLLVQMLYFDPTKRISVNSALCH  269 (395)
Q Consensus       236 ~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~H  269 (395)
                      ..+...++.+.+||.+||..||++|||+.|+++|
T Consensus       254 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         254 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            2345678899999999999999999999999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=1.1e-31  Score=245.56  Aligned_cols=164  Identities=12%  Similarity=0.071  Sum_probs=128.8

Q ss_pred             HHhhhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecC-----CCCeEEeeCCcccccCCCCC------CCcccc
Q psy2865          77 REKKRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQA-----TYSSKICDFGLARVEEPDPN------KAMTQE  145 (395)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~-----~~~vKl~DFGla~~~~~~~~------~~~~~~  145 (395)
                      ....++..++..++.|++.||.|||+.||+||||||+|||++.     ++.+||+|||+|+.......      ......
T Consensus        94 ~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~  173 (293)
T d1csna_          94 CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL  173 (293)
T ss_dssp             TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCC
T ss_pred             hccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCce
Confidence            3456888999999999999999999999999999999999974     57799999999987543211      123456


Q ss_pred             cccccccchhhhhcCCCCCccchHHhHHHHHHHHHcCCCCCCCCChHhH---HHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         146 VVTQYYRAPEILMGARHYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQ---LGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       146 ~~t~~y~aPEvl~~~~~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~---l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                      +||+.|+|||++.+.. |+.++|||||||++|||++|..||.+......   +..+....-.+                 
T Consensus       174 ~GT~~y~aPE~~~~~~-~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~-----------------  235 (293)
T d1csna_         174 SGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST-----------------  235 (293)
T ss_dssp             CSCTTTCCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS-----------------
T ss_pred             EEchhhcCHHHhcCCC-CChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC-----------------
Confidence            8999999999999876 89999999999999999999999987654332   22222110000                 


Q ss_pred             hccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         223 RQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                                ....+...+++++.+|+..|+..+|++||+++.+.+
T Consensus       236 ----------~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         236 ----------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             ----------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ----------ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence                      112234567889999999999999999999877644

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-30  Score=239.91  Aligned_cols=180  Identities=17%  Similarity=0.166  Sum_probs=119.1

Q ss_pred             hhhcCCCCchhhHHhhcCCCCccc--------cCccccCCCCCceeecCCCCeEEeeCCcccccCCCCC---CCcccccc
Q psy2865          79 KKRSSRRKPFKLSEISATRPDSTI--------DGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPN---KAMTQEVV  147 (395)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lH~--------~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~---~~~~~~~~  147 (395)
                      ..+++.....++.|++.||.|+|+        .|||||||||+|||++.++.+||+|||+++.......   ......+|
T Consensus        95 ~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~g  174 (303)
T d1vjya_          95 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG  174 (303)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceec
Confidence            357777888899999999999996        5999999999999999999999999999987543221   13345789


Q ss_pred             cccccchhhhhcCC-----CCCccchHHhHHHHHHHHHcCCCCCCCCChHhHHHHHHHhcCCCCHHHHHhhhhhhhhhhh
Q psy2865         148 TQYYRAPEILMGAR-----HYSAAVDVWSVGCIFAELLGRRILFQAQSPVQQLGLITDLLGTPTPEEMRHACDGAKCHML  222 (395)
Q Consensus       148 t~~y~aPEvl~~~~-----~~~~~~DiWSlG~il~ell~g~~~f~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  222 (395)
                      |+.|+|||++.+..     .++.++|||||||++|||+||.+||......... ........+....+...       ..
T Consensus       175 t~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~  246 (303)
T d1vjya_         175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP-YYDLVPSDPSVEEMRKV-------VC  246 (303)
T ss_dssp             CGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT-TTTTSCSSCCHHHHHHH-------HT
T ss_pred             ccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccc-hhhcccccchHHHHHHH-------Hh
Confidence            99999999987542     1567899999999999999999887543321100 00000111111111110       00


Q ss_pred             hccccCCccchhhccCCCCCHHHHHHHHHccccCCCCCcCHHHHHc
Q psy2865         223 RQTRKSQSLSSLYSLSSQATGEAVHLLVQMLYFDPTKRISVNSALC  268 (395)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ta~e~L~  268 (395)
                      .....+ .+.. ..........+.+|+.+||..||++|||+.|+++
T Consensus       247 ~~~~~p-~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         247 EQKLRP-NIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             TSCCCC-CCCG-GGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             ccccCC-CCCc-ccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            000000 0000 0001122345889999999999999999999976

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.40  E-value=7.8e-15  Score=124.00  Aligned_cols=86  Identities=13%  Similarity=-0.022  Sum_probs=62.6

Q ss_pred             hhcCCCCchhhHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccccCCCCCCCcccccccccccc----hh
Q psy2865          80 KRSSRRKPFKLSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARVEEPDPNKAMTQEVVTQYYRA----PE  155 (395)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~~~~~~~~~~~~~~~t~~y~a----PE  155 (395)
                      .++...+..++.|++.|+.|||+.||+||||||+|||++.++ ++|+|||+|.....+   ....+    ..+.    .+
T Consensus        99 ~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~---~~~~~----l~rd~~~~~~  170 (191)
T d1zara2          99 RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEE---GWREI----LERDVRNIIT  170 (191)
T ss_dssp             GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE-EEECCCTTCEETTST---THHHH----HHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC-EEEEECCCcccCCCC---CcHHH----HHHHHHHHHH
Confidence            366777888999999999999999999999999999999655 899999999764321   11111    0111    11


Q ss_pred             hhhcCCCCCccchHHhHHHH
Q psy2865         156 ILMGARHYSAAVDVWSVGCI  175 (395)
Q Consensus       156 vl~~~~~~~~~~DiWSlG~i  175 (395)
                      .+ .. .|+..+|+||+.--
T Consensus       171 ~f-~r-~y~~~~d~~s~~~~  188 (191)
T d1zara2         171 YF-SR-TYRTEKDINSAIDR  188 (191)
T ss_dssp             HH-HH-HHCCCCCHHHHHHH
T ss_pred             HH-cC-CCCCcccHHHHHHH
Confidence            22 22 38899999997643

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=2.1e-09  Score=95.23  Aligned_cols=40  Identities=28%  Similarity=0.562  Sum_probs=36.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       106 ~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl  145 (276)
T d1uwha_         106 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI  145 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEE
Confidence            4556778899999999999999999999999999988875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=4.4e-09  Score=92.87  Aligned_cols=38  Identities=39%  Similarity=0.511  Sum_probs=34.0

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       107 ~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL  144 (271)
T d1nvra_         107 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKI  144 (271)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEE
Confidence            34567799999999999999999999999999988875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=4.5e-09  Score=93.84  Aligned_cols=40  Identities=30%  Similarity=0.545  Sum_probs=35.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       118 ~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl  157 (293)
T d1yhwa1         118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKL  157 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEee
Confidence            3456678899999999999999999999999999998875

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=4.2e-09  Score=93.89  Aligned_cols=40  Identities=33%  Similarity=0.552  Sum_probs=35.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       112 ~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl  151 (288)
T d2jfla1         112 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKL  151 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEE
Confidence            3455677899999999999999999999999999988775

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.7e-09  Score=95.72  Aligned_cols=40  Identities=25%  Similarity=0.421  Sum_probs=35.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||++|||||||||+||||+.+|.+||
T Consensus       136 ~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl  175 (299)
T d1ywna1         136 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI  175 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEE
Confidence            3445678899999999999999999999999999988875

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=5.1e-09  Score=92.02  Aligned_cols=40  Identities=43%  Similarity=0.575  Sum_probs=35.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       108 ~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl  147 (263)
T d2j4za1         108 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKI  147 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEee
Confidence            3445678899999999999999999999999999988874

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.50  E-value=5.3e-09  Score=94.16  Aligned_cols=40  Identities=35%  Similarity=0.645  Sum_probs=35.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       117 ~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl  156 (309)
T d1u5ra_         117 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL  156 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEE
Confidence            3456678899999999999999999999999999998875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=3.3e-09  Score=94.57  Aligned_cols=40  Identities=25%  Similarity=0.429  Sum_probs=35.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       117 ~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl  156 (287)
T d1opja_         117 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV  156 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEE
Confidence            3456678899999999999999999999999999988875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=6.6e-09  Score=94.66  Aligned_cols=40  Identities=30%  Similarity=0.417  Sum_probs=35.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||++|||||||||+||||+.+|.+||
T Consensus       107 ~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl  146 (337)
T d1o6la_         107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI  146 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEE
Confidence            3445677899999999999999999999999999998875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=5.5e-09  Score=94.86  Aligned_cols=40  Identities=23%  Similarity=0.334  Sum_probs=35.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       166 ~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl  205 (325)
T d1rjba_         166 LLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKI  205 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEE
Confidence            3445678899999999999999999999999999998875

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.47  E-value=9.4e-09  Score=92.82  Aligned_cols=37  Identities=38%  Similarity=0.594  Sum_probs=33.8

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       109 ~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL  145 (316)
T d1fota_         109 YAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKI  145 (316)
T ss_dssp             HHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEE
Confidence            4567799999999999999999999999999998875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.47  E-value=8.5e-09  Score=94.46  Aligned_cols=40  Identities=28%  Similarity=0.464  Sum_probs=35.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       143 ~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL  182 (350)
T d1rdqe_         143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV  182 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEe
Confidence            3345677799999999999999999999999999998875

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=6.8e-09  Score=93.05  Aligned_cols=40  Identities=33%  Similarity=0.459  Sum_probs=35.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       130 ~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl  169 (299)
T d1jpaa_         130 LVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKV  169 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEE
Confidence            3456678899999999999999999999999999998875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=1.1e-08  Score=93.72  Aligned_cols=40  Identities=48%  Similarity=0.757  Sum_probs=35.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       111 i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl  150 (345)
T d1pmea_         111 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI  150 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEE
Confidence            4456678899999999999999999999999999998775

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=9.6e-09  Score=91.30  Aligned_cols=40  Identities=33%  Similarity=0.463  Sum_probs=35.9

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.+|+||||||+||||+.+|.+||
T Consensus       112 ~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl  151 (283)
T d1mqba_         112 LVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKV  151 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEE
Confidence            3456678899999999999999999999999999998875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1.4e-08  Score=90.40  Aligned_cols=39  Identities=33%  Similarity=0.582  Sum_probs=34.5

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.|||||||||+||||+.+|.+||
T Consensus       111 ~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl  149 (288)
T d1uu3a_         111 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI  149 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEe
Confidence            345567799999999999999999999999999988774

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1e-08  Score=90.54  Aligned_cols=39  Identities=18%  Similarity=0.417  Sum_probs=34.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+++|+||||||+||||+.++.+||
T Consensus       112 ~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl  150 (272)
T d1qpca_         112 LDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI  150 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCcccCccchhheeeecccceee
Confidence            445677799999999999999999999999999988875

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=9.8e-09  Score=93.00  Aligned_cols=40  Identities=43%  Similarity=0.625  Sum_probs=35.0

Q ss_pred             ccCcchhhhhcccccccC-ceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSA-RILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~-~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||++ ||+||||||+||||+.+|.+||
T Consensus       106 ~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl  146 (322)
T d1s9ja_         106 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL  146 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEE
Confidence            445667889999999974 8999999999999999998875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.40  E-value=1.6e-08  Score=93.12  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=35.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       109 ~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl  148 (364)
T d1omwa3         109 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI  148 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEE
Confidence            3445667799999999999999999999999999998875

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.4e-08  Score=90.81  Aligned_cols=40  Identities=38%  Similarity=0.590  Sum_probs=35.0

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+|||++.++.+||
T Consensus       104 ~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl  143 (298)
T d1gz8a_         104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL  143 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHhhcCCEEccccCchheeecccCccee
Confidence            3445667799999999999999999999999999988764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.40  E-value=1.2e-08  Score=90.86  Aligned_cols=40  Identities=38%  Similarity=0.568  Sum_probs=35.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.|||||||||+||||+.+|.+|+
T Consensus       102 ~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl  141 (286)
T d1ob3a_         102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI  141 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             hHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEe
Confidence            4456677899999999999999999999999999988774

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=1.6e-08  Score=90.46  Aligned_cols=40  Identities=43%  Similarity=0.664  Sum_probs=35.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+|||++.+|.+||
T Consensus       102 ~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL  141 (299)
T d1ua2a_         102 IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKL  141 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhhccceecccCCcceEEecCCCcccc
Confidence            4456678899999999999999999999999999988875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.2e-08  Score=92.16  Aligned_cols=40  Identities=30%  Similarity=0.435  Sum_probs=35.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       113 ~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl  152 (317)
T d1xkka_         113 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI  152 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEe
Confidence            4456778899999999999999999999999999988775

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=2.5e-08  Score=91.40  Aligned_cols=40  Identities=45%  Similarity=0.648  Sum_probs=33.9

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCC-cccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC-ILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~-~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+| .+||
T Consensus       124 ~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl  164 (350)
T d1q5ka_         124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL  164 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeE
Confidence            344567889999999999999999999999999775 5654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.9e-08  Score=90.26  Aligned_cols=38  Identities=39%  Similarity=0.678  Sum_probs=33.9

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.||.|||++|||||||||+|||++..|.+||
T Consensus       120 ~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl  157 (305)
T d1blxa_         120 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL  157 (305)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeee
Confidence            35567799999999999999999999999999988764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.1e-08  Score=89.81  Aligned_cols=40  Identities=28%  Similarity=0.431  Sum_probs=35.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ...++.|++.||.|+|+.+|+||||||+||||+.+|.+||
T Consensus       103 ~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl  142 (263)
T d1sm2a_         103 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV  142 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEe
Confidence            3456678899999999999999999999999999988775

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.5e-08  Score=89.65  Aligned_cols=40  Identities=25%  Similarity=0.378  Sum_probs=35.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.+|.+||
T Consensus       109 ~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl  148 (277)
T d1xbba_         109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKI  148 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccc
Confidence            4556778899999999999999999999999999887764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.2e-08  Score=90.65  Aligned_cols=40  Identities=23%  Similarity=0.326  Sum_probs=35.6

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+||||+.+|.+||
T Consensus       111 ~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl  150 (285)
T d1u59a_         111 VAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKI  150 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceee
Confidence            4456678899999999999999999999999999988775

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.36  E-value=1.7e-08  Score=89.34  Aligned_cols=39  Identities=31%  Similarity=0.628  Sum_probs=33.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCccc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILK  394 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k  394 (395)
                      +..++.|++.|+.|||++||+||||||+||||+.++..+
T Consensus       113 ~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~  151 (277)
T d1o6ya_         113 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK  151 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEE
T ss_pred             HHHHHHHHHHHHHHHHhCCccCccccCcccccCccccce
Confidence            344567789999999999999999999999999887654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.35  E-value=2.7e-08  Score=87.97  Aligned_cols=40  Identities=30%  Similarity=0.479  Sum_probs=35.5

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||++||+||||||+||||+.+|.+||
T Consensus       112 ~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl  151 (277)
T d1phka_         112 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL  151 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEE
Confidence            4446678899999999999999999999999999988875

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=3.2e-08  Score=89.32  Aligned_cols=38  Identities=34%  Similarity=0.635  Sum_probs=34.0

Q ss_pred             CcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       121 ~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl  158 (318)
T d3blha1         121 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL  158 (318)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEe
Confidence            34567799999999999999999999999999988764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=3.5e-08  Score=90.22  Aligned_cols=40  Identities=48%  Similarity=0.762  Sum_probs=35.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+|||++.+|.+|+
T Consensus       123 ~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl  162 (346)
T d1cm8a_         123 IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKI  162 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCcccccCcchhhccccccccc
Confidence            3445677899999999999999999999999999988764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=3.2e-08  Score=88.53  Aligned_cols=39  Identities=26%  Similarity=0.507  Sum_probs=34.8

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.+||||||||+|||++.+|.+||
T Consensus       138 ~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl  176 (299)
T d1fgka_         138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI  176 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEe
Confidence            445667899999999999999999999999999988774

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=3.5e-08  Score=87.07  Aligned_cols=39  Identities=31%  Similarity=0.410  Sum_probs=32.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCC-CcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN-CILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~-~~~k~  395 (395)
                      ..++.|++.|+.|||++||+||||||+||||+.+ +.+||
T Consensus       113 ~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl  152 (273)
T d1xwsa_         113 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL  152 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEE
Confidence            3455677999999999999999999999999854 66664

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=3.3e-08  Score=87.06  Aligned_cols=40  Identities=28%  Similarity=0.443  Sum_probs=33.9

Q ss_pred             ccCcchhhhhcccccccCc--eEecCCCCCCeeecC-CCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSAR--ILHRDIKPGNLLVNS-NCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~--~~hr~~~~~n~~~~~-~~~~k~  395 (395)
                      +..++.|++.||.|||+++  |+||||||+||||+. +|.+||
T Consensus       114 ~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl  156 (270)
T d1t4ha_         114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI  156 (270)
T ss_dssp             HHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEE
Confidence            3455678899999999998  999999999999964 677764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=3.7e-08  Score=90.07  Aligned_cols=39  Identities=49%  Similarity=0.750  Sum_probs=34.4

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||++||+||||||+|||++.+|.+|+
T Consensus       124 ~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl  162 (348)
T d2gfsa1         124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI  162 (348)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCcccccCCccccccccccccc
Confidence            345667799999999999999999999999999988764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.28  E-value=4.7e-08  Score=89.43  Aligned_cols=39  Identities=36%  Similarity=0.508  Sum_probs=32.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeec--CCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVN--SNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~--~~~~~k~  395 (395)
                      ..++.|++.||.|||+.|||||||||+||||+  ..|.+||
T Consensus       130 ~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL  170 (352)
T d1koba_         130 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKI  170 (352)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEE
Confidence            34556779999999999999999999999998  4566664

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=3.3e-08  Score=87.22  Aligned_cols=40  Identities=28%  Similarity=0.427  Sum_probs=35.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||++||+||||||+||||+.++.+||
T Consensus       113 ~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl  152 (273)
T d1u46a_         113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKI  152 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceee
Confidence            3455677899999999999999999999999999887764

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=3.3e-08  Score=87.02  Aligned_cols=40  Identities=28%  Similarity=0.448  Sum_probs=30.3

Q ss_pred             ccCcchhhhhcccccccCc-----eEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSAR-----ILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~-----~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||+.|     |+||||||+||||+.+|.+||
T Consensus       111 ~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl  155 (269)
T d2java1         111 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL  155 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEE
Confidence            4556778899999999876     999999999999999998875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=98.27  E-value=3.5e-08  Score=90.28  Aligned_cols=40  Identities=25%  Similarity=0.399  Sum_probs=33.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecC--CCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNS--NCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~--~~~~k~  395 (395)
                      +..++.|++.||.|||++|||||||||+||||+.  +|.+||
T Consensus       126 ~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL  167 (350)
T d1koaa2         126 AVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKL  167 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEE
Confidence            3445667799999999999999999999999964  466664

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=3.1e-08  Score=87.39  Aligned_cols=40  Identities=40%  Similarity=0.456  Sum_probs=35.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+++||||||||+||||+.+|.+||
T Consensus       110 ~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl  149 (273)
T d1mp8a_         110 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKL  149 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             HHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEE
Confidence            3445678899999999999999999999999999988875

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.25  E-value=5.5e-08  Score=88.12  Aligned_cols=37  Identities=35%  Similarity=0.617  Sum_probs=31.4

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCC-cccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC-ILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~-~~k~  395 (395)
                      ++.|++.||.|||++||+||||||+||||+..+ .+|+
T Consensus       134 i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl  171 (328)
T d3bqca1         134 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL  171 (328)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEE
T ss_pred             HHHHHHHHHHHHhhcccccccccccceEEcCCCCeeee
Confidence            456679999999999999999999999998754 4553

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.25  E-value=3.7e-08  Score=88.23  Aligned_cols=39  Identities=26%  Similarity=0.438  Sum_probs=34.8

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.+||||||||+||||+.++.+||
T Consensus       143 ~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl  181 (301)
T d1lufa_         143 LCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKI  181 (301)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEE
Confidence            445667899999999999999999999999999988875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=6.1e-08  Score=86.16  Aligned_cols=39  Identities=44%  Similarity=0.585  Sum_probs=34.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.||.|||.+||+||||||+||||+.++.+||
T Consensus       104 ~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl  142 (292)
T d1unla_         104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL  142 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceee
Confidence            345567799999999999999999999999998887764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3e-08  Score=87.98  Aligned_cols=39  Identities=23%  Similarity=0.468  Sum_probs=34.7

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       116 ~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl  154 (285)
T d1fmka3         116 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV  154 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEE
Confidence            445677799999999999999999999999999988775

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=7.4e-08  Score=86.91  Aligned_cols=40  Identities=28%  Similarity=0.403  Sum_probs=35.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.||.|||++||+||||||+|||++.+|.+|+
T Consensus       105 ~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl  144 (320)
T d1xjda_         105 ATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI  144 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceec
Confidence            3445678899999999999999999999999999987764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=6.7e-08  Score=84.41  Aligned_cols=39  Identities=31%  Similarity=0.514  Sum_probs=35.0

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+.||+||||||+||||++++.+||
T Consensus       103 ~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl  141 (258)
T d1k2pa_         103 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV  141 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEE
Confidence            445678899999999999999999999999999988775

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.20  E-value=1.2e-07  Score=78.87  Aligned_cols=33  Identities=21%  Similarity=0.297  Sum_probs=29.0

Q ss_pred             chhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         360 QSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       360 ~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      +.|++.++.|||+.||+||||||+||||+..|.
T Consensus       109 ~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~~  141 (191)
T d1zara2         109 LDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGI  141 (191)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSTTSEEEETTEE
T ss_pred             HHHHHHHHHHHhhCCEEEccCChhheeeeCCCE
Confidence            345589999999999999999999999997764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=5.3e-08  Score=87.59  Aligned_cols=39  Identities=26%  Similarity=0.394  Sum_probs=34.3

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||+++||||||||+||||+..|.+|+
T Consensus       148 ~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki  186 (311)
T d1t46a_         148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI  186 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeeecccccccccccccCcccc
Confidence            345677899999999999999999999999999887764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=1e-07  Score=86.62  Aligned_cols=40  Identities=43%  Similarity=0.615  Sum_probs=32.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCC---CcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSN---CILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~---~~~k~  395 (395)
                      +..++.|++.|+.|||++||+||||||+||||+..   +.+|+
T Consensus       113 ~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl  155 (335)
T d2ozaa1         113 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL  155 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccc
Confidence            34456677999999999999999999999999863   45553

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.3e-07  Score=85.27  Aligned_cols=35  Identities=29%  Similarity=0.497  Sum_probs=30.2

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~  391 (395)
                      ..++.|++.|+.|||++||+||||||+||||+.++
T Consensus       105 ~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~  139 (321)
T d1tkia_         105 VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR  139 (321)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccccceeecCCC
Confidence            34456779999999999999999999999998654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.15  E-value=1.3e-07  Score=84.09  Aligned_cols=34  Identities=24%  Similarity=0.465  Sum_probs=29.7

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      +..++.|++.|+.|||++||+||||||+||||+.
T Consensus       103 ~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~  136 (293)
T d1csna_         103 VAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGR  136 (293)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECC
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCCccceeecC
Confidence            3445667799999999999999999999999974

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.3e-07  Score=85.29  Aligned_cols=37  Identities=32%  Similarity=0.352  Sum_probs=33.3

Q ss_pred             cchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         359 PQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       359 ~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ++.|++.|+.|||+.||+||||||+||||+.+|.+||
T Consensus       134 ~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL  170 (322)
T d1vzoa_         134 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVL  170 (322)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEE
Confidence            3457799999999999999999999999999988764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.12  E-value=1.4e-07  Score=84.56  Aligned_cols=40  Identities=33%  Similarity=0.500  Sum_probs=33.0

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeec---CCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVN---SNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~---~~~~~k~  395 (395)
                      +..++.|++.|+.|||++||+||||||+|||+.   .+|.+||
T Consensus       109 ~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl  151 (307)
T d1a06a_         109 ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI  151 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred             HHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEE
Confidence            344566779999999999999999999999995   3566664

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.10  E-value=1.5e-07  Score=84.08  Aligned_cols=34  Identities=29%  Similarity=0.622  Sum_probs=30.1

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNS  389 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~  389 (395)
                      +..++.|++.|+.|||++|||||||||+|||++.
T Consensus       105 ~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~  138 (299)
T d1ckia_         105 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL  138 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCCHhhccccc
Confidence            4556678899999999999999999999999764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.3e-07  Score=84.81  Aligned_cols=40  Identities=23%  Similarity=0.423  Sum_probs=35.8

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.+++.||.|||+.+|+||||||+||||+.++.+||
T Consensus       135 ~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl  174 (308)
T d1p4oa_         135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI  174 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEE
Confidence            4456778899999999999999999999999999988875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=2.1e-07  Score=82.79  Aligned_cols=37  Identities=27%  Similarity=0.461  Sum_probs=32.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCc
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCI  392 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~  392 (395)
                      +..++.|++.|+.|||+.||+||||||+||||+.+|.
T Consensus       115 ~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~  151 (293)
T d1jksa_         115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV  151 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSS
T ss_pred             HHHHHHHHHHHHHhhhhcceeecccccceEEEecCCC
Confidence            3445677899999999999999999999999998764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=2e-07  Score=85.28  Aligned_cols=39  Identities=44%  Similarity=0.655  Sum_probs=33.9

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|||++||+||||||+|||++.++.+|+
T Consensus       122 ~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl  160 (355)
T d2b1pa1         122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  160 (355)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHHHHHhhhcccccccCCccccccccccceee
Confidence            345677799999999999999999999999999877653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=2.1e-07  Score=83.51  Aligned_cols=39  Identities=26%  Similarity=0.416  Sum_probs=34.6

Q ss_pred             cCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         357 INPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       357 ~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      ..++.|++.|+.|+|+.+|+||||||+||||+.++.+||
T Consensus       133 ~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL  171 (311)
T d1r0pa_         133 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV  171 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEE
Confidence            345667899999999999999999999999999888764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.8e-07  Score=83.97  Aligned_cols=40  Identities=25%  Similarity=0.488  Sum_probs=35.4

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|+|+.+|+||||||+|||++.++.+||
T Consensus       129 ~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl  168 (309)
T d1fvra_         129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  168 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred             HHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEE
Confidence            4556788999999999999999999999999998877664

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=4.1e-07  Score=81.24  Aligned_cols=38  Identities=32%  Similarity=0.346  Sum_probs=32.1

Q ss_pred             Ccchhhhhccccccc--------CceEecCCCCCCeeecCCCcccC
Q psy2865         358 NPQSAAFKSLKYLHS--------ARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       358 ~~~~qi~~gl~y~h~--------~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      .++.+++.|+.|+|+        .|||||||||+||||+.+|.+||
T Consensus       104 ~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl  149 (303)
T d1vjya_         104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  149 (303)
T ss_dssp             HHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEE
Confidence            355567888888885        69999999999999999998875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=3.6e-07  Score=79.86  Aligned_cols=40  Identities=23%  Similarity=0.428  Sum_probs=35.3

Q ss_pred             ccCcchhhhhcccccccCceEecCCCCCCeeecCCCcccC
Q psy2865         356 CINPQSAAFKSLKYLHSARILHRDIKPGNLLVNSNCILKW  395 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~~~~~hr~~~~~n~~~~~~~~~k~  395 (395)
                      +..++.|++.|+.|||+.+|+||||||+|||++.+|.+|+
T Consensus       105 ~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl  144 (262)
T d1byga_         105 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV  144 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEE
T ss_pred             HHHHHHHHHhhccccccCceeccccchHhheecCCCCEee
Confidence            3456678899999999999999999999999999988764

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.71  E-value=1e-06  Score=80.55  Aligned_cols=36  Identities=31%  Similarity=0.480  Sum_probs=30.2

Q ss_pred             ccCcchhhhhccccccc-CceEecCCCCCCeeecCCC
Q psy2865         356 CINPQSAAFKSLKYLHS-ARILHRDIKPGNLLVNSNC  391 (395)
Q Consensus       356 ~~~~~~qi~~gl~y~h~-~~~~hr~~~~~n~~~~~~~  391 (395)
                      +..++.|++.|+.|||+ .||+||||||+||||+..|
T Consensus       127 i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~  163 (362)
T d1q8ya_         127 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD  163 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccC
Confidence            34455677999999997 8999999999999997653

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.37  E-value=0.0051  Score=53.86  Aligned_cols=32  Identities=19%  Similarity=0.104  Sum_probs=28.3

Q ss_pred             ccCccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865         102 IDGYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus       102 ~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      ..|+||+|+.++||+++.+..+-|+||+.|+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccccccCCcchhhhhcccccceeEeccccccc
Confidence            35899999999999999887778999998864

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.65  E-value=0.013  Score=49.27  Aligned_cols=44  Identities=18%  Similarity=0.103  Sum_probs=32.5

Q ss_pred             hHHhhcCCCCccccCccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865          90 LSEISATRPDSTIDGYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus        90 ~~qi~~~l~~lH~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      +..+...+.......++|+|+.|.|||++.+..+-|+||+.+..
T Consensus       162 ~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         162 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            33344444444455689999999999999876678999998764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.23  E-value=0.027  Score=47.34  Aligned_cols=32  Identities=9%  Similarity=-0.011  Sum_probs=26.9

Q ss_pred             ccCccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865         102 IDGYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus       102 ~~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      ...++|+|+.|.|||++.++.+-|+||+.+..
T Consensus       182 ~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         182 ELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CcEEEEeeccCcceeecCCceEEEeechhccc
Confidence            34689999999999999776667999998764

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=89.59  E-value=0.059  Score=47.08  Aligned_cols=29  Identities=10%  Similarity=-0.018  Sum_probs=24.1

Q ss_pred             cCccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865         103 DGYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus       103 ~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      .++||+|+.+.|||++.+  ..|+||+-++.
T Consensus       192 ~~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             ceeecCCCCcccEEEeCC--ceEEechhccc
Confidence            478999999999999743  45899998864

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=87.16  E-value=0.12  Score=46.40  Aligned_cols=30  Identities=10%  Similarity=-0.003  Sum_probs=25.9

Q ss_pred             cCccccCCCCCceeecCCCCeEEeeCCcccc
Q psy2865         103 DGYQARQPTRQLVMYQATYSSKICDFGLARV  133 (395)
Q Consensus       103 ~~iiHrDlkp~Nil~~~~~~vKl~DFGla~~  133 (395)
                      ..++|+|+.|.|||++.+. ++|+||-.|.+
T Consensus       223 ~~LiHGDl~~gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             CEEECSCCCGGGEEECSSC-EEECCCTTCEE
T ss_pred             cceeccCCcCCceeEcCCc-eEEechhhccc
Confidence            3689999999999998765 89999988764