Psyllid ID: psy2984
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 228 | ||||||
| 110762262 | 498 | PREDICTED: diacylglycerol O-acyltransfer | 0.692 | 0.317 | 0.502 | 4e-45 | |
| 383857805 | 498 | PREDICTED: diacylglycerol O-acyltransfer | 0.649 | 0.297 | 0.524 | 9e-45 | |
| 345483246 | 501 | PREDICTED: diacylglycerol O-acyltransfer | 0.649 | 0.295 | 0.540 | 2e-44 | |
| 307189845 | 495 | Diacylglycerol O-acyltransferase 1 [Camp | 0.649 | 0.298 | 0.524 | 2e-44 | |
| 350403310 | 498 | PREDICTED: diacylglycerol O-acyltransfer | 0.692 | 0.317 | 0.492 | 3e-44 | |
| 340723317 | 498 | PREDICTED: diacylglycerol O-acyltransfer | 0.692 | 0.317 | 0.492 | 3e-44 | |
| 332019570 | 182 | Diacylglycerol O-acyltransferase 1 [Acro | 0.644 | 0.807 | 0.521 | 3e-43 | |
| 307208007 | 182 | Diacylglycerol O-acyltransferase 1 [Harp | 0.635 | 0.796 | 0.522 | 7e-43 | |
| 91083363 | 492 | PREDICTED: similar to sterol o-acyltrans | 0.649 | 0.300 | 0.508 | 3e-42 | |
| 195115022 | 561 | GI14192 [Drosophila mojavensis] gi|19391 | 0.618 | 0.251 | 0.517 | 8e-40 |
| >gi|110762262|ref|XP_624754.2| PREDICTED: diacylglycerol O-acyltransferase 1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 122/193 (63%), Gaps = 35/193 (18%)
Query: 71 CIPDQELIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCII------------- 117
C+ + + NMDV KA+ERLLKL++ + L L S+L ++
Sbjct: 306 CVKNSLVPFSNMDVAKASERLLKLAIPNHLVWLCFFYLTFHSLLNLVGELLHFADRNFYC 365
Query: 118 ----------------------SCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVP 155
+ RHLY P++E GY + TAS VFFISAF HEYLVSVP
Sbjct: 366 DWWNAHNIDIFWRTWNMPVHRWAVRHLYIPIIEMGYKKNTASVTVFFISAFFHEYLVSVP 425
Query: 156 LRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVIT 215
L+T+K WAF+GMMGQIPLSM+S+ VEK +G RWGNI VW+SLI+GQPLCIMMYYHD+VIT
Sbjct: 426 LKTFKTWAFLGMMGQIPLSMISKKVEKHWGARWGNITVWASLIIGQPLCIMMYYHDYVIT 485
Query: 216 HFGEALLDKYSHV 228
HFGE L++ YS V
Sbjct: 486 HFGENLIEDYSVV 498
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383857805|ref|XP_003704394.1| PREDICTED: diacylglycerol O-acyltransferase 1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|345483246|ref|XP_001600993.2| PREDICTED: diacylglycerol O-acyltransferase 1-like isoform 1 [Nasonia vitripennis] gi|345483248|ref|XP_003424778.1| PREDICTED: diacylglycerol O-acyltransferase 1-like isoform 2 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|307189845|gb|EFN74110.1| Diacylglycerol O-acyltransferase 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|350403310|ref|XP_003486764.1| PREDICTED: diacylglycerol O-acyltransferase 1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340723317|ref|XP_003400037.1| PREDICTED: diacylglycerol O-acyltransferase 1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|332019570|gb|EGI60049.1| Diacylglycerol O-acyltransferase 1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|307208007|gb|EFN85566.1| Diacylglycerol O-acyltransferase 1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|91083363|ref|XP_975142.1| PREDICTED: similar to sterol o-acyltransferase [Tribolium castaneum] gi|270007773|gb|EFA04221.1| hypothetical protein TcasGA2_TC014471 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|195115022|ref|XP_002002066.1| GI14192 [Drosophila mojavensis] gi|193912641|gb|EDW11508.1| GI14192 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 228 | ||||||
| FB|FBgn0004797 | 615 | mdy "midway" [Drosophila melan | 0.447 | 0.165 | 0.696 | 3.7e-40 | |
| WB|WBGene00010408 | 496 | mboa-2 [Caenorhabditis elegans | 0.425 | 0.195 | 0.555 | 4e-31 | |
| ZFIN|ZDB-GENE-030131-4600 | 499 | dgat1a "diacylglycerol O-acylt | 0.425 | 0.194 | 0.519 | 3.7e-28 | |
| ZFIN|ZDB-GENE-040718-158 | 507 | dgat1b "diacylglycerol O-acylt | 0.429 | 0.193 | 0.543 | 4.9e-28 | |
| UNIPROTKB|E2RDN4 | 489 | DGAT1 "O-acyltransferase" [Can | 0.416 | 0.194 | 0.479 | 2.4e-25 | |
| UNIPROTKB|F1RSM6 | 489 | DGAT1 "O-acyltransferase" [Sus | 0.412 | 0.192 | 0.494 | 9e-25 | |
| UNIPROTKB|Q8MK44 | 489 | DGAT1 "Diacylglycerol O-acyltr | 0.403 | 0.188 | 0.494 | 1.2e-24 | |
| UNIPROTKB|O75907 | 488 | DGAT1 "Diacylglycerol O-acyltr | 0.416 | 0.194 | 0.489 | 1.9e-24 | |
| MGI|MGI:1333825 | 498 | Dgat1 "diacylglycerol O-acyltr | 0.416 | 0.190 | 0.459 | 2.3e-23 | |
| RGD|628673 | 498 | Dgat1 "diacylglycerol O-acyltr | 0.416 | 0.190 | 0.438 | 6.4e-23 |
| FB|FBgn0004797 mdy "midway" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 394 (143.8 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 71/102 (69%), Positives = 84/102 (82%)
Query: 120 RHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRH 179
RHLY P+V+ GYS AS++VF SA HEYLVSVPL+ YKIWAFMGMMGQIPLS +S+
Sbjct: 507 RHLYIPVVQMGYSSRQASTIVFLFSAVFHEYLVSVPLQIYKIWAFMGMMGQIPLSAISKS 566
Query: 180 VEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEAL 221
+EKK GPR GNIIVW+S+ILGQPLCIM YYHD+V+ HF +L
Sbjct: 567 IEKKLGPRMGNIIVWASIILGQPLCIMAYYHDYVVQHFKNSL 608
|
|
| WB|WBGene00010408 mboa-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-4600 dgat1a "diacylglycerol O-acyltransferase homolog 1a (mouse)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040718-158 dgat1b "diacylglycerol O-acyltransferase homolog 1b (mouse)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RDN4 DGAT1 "O-acyltransferase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RSM6 DGAT1 "O-acyltransferase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8MK44 DGAT1 "Diacylglycerol O-acyltransferase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O75907 DGAT1 "Diacylglycerol O-acyltransferase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1333825 Dgat1 "diacylglycerol O-acyltransferase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|628673 Dgat1 "diacylglycerol O-acyltransferase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 228 | |||
| cd11560 | 194 | cd11560, W2_eIF5C_like, C-terminal W2 domain of th | 5e-26 | |
| PLN02401 | 446 | PLN02401, PLN02401, diacylglycerol o-acyltransfera | 2e-23 | |
| PLN03242 | 410 | PLN03242, PLN03242, diacylglycerol o-acyltransfera | 4e-22 | |
| COG5056 | 512 | COG5056, ARE1, Acyl-CoA cholesterol acyltransferas | 2e-10 |
| >gnl|CDD|211398 cd11560, W2_eIF5C_like, C-terminal W2 domain of the eukaryotic translation initiation factor 5C and similar proteins | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 5e-26
Identities = 36/79 (45%), Positives = 58/79 (73%)
Query: 2 EFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVA 61
EF PPNKR++E+F F+E+GL ++V+ + QASQE KKELQ++L+E I+E +K+I+A
Sbjct: 1 EFFPPNKRTEEHFAEHFKEEGLDELVEFYRKQASQEIKKELQQELKEMIAEEEPVKEIIA 60
Query: 62 DIREIANKHCIPDQELIVL 80
++E K +P+ E++ L
Sbjct: 61 AVKEQMKKSSLPEHEVVGL 79
|
eIF5C appears to be essential for the initiation of protein translation; its actual function, and specifically that of the C-terminal W2 domain, are not well understood. The Drosophila ortholog, kra (krasavietz) or exba (extra bases), may be involved in translational inhibition in neural development. The structure of this C-terminal domain resembles that of a set of concatenated HEAT repeats. Length = 194 |
| >gnl|CDD|215225 PLN02401, PLN02401, diacylglycerol o-acyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|178780 PLN03242, PLN03242, diacylglycerol o-acyltransferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227389 COG5056, ARE1, Acyl-CoA cholesterol acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 228 | |||
| KOG0380|consensus | 523 | 100.0 | ||
| PLN02401 | 446 | diacylglycerol o-acyltransferase | 100.0 | |
| PLN03242 | 410 | diacylglycerol o-acyltransferase; Provisional | 100.0 | |
| COG5056 | 512 | ARE1 Acyl-CoA cholesterol acyltransferase [Lipid m | 99.96 | |
| KOG2297|consensus | 412 | 99.87 | ||
| PF03062 | 322 | MBOAT: MBOAT, membrane-bound O-acyltransferase fam | 99.02 | |
| PF13813 | 83 | MBOAT_2: Membrane bound O-acyl transferase family | 95.49 | |
| PLN02332 | 465 | membrane bound O-acyl transferase (MBOAT) family p | 91.93 | |
| PF06570 | 206 | DUF1129: Protein of unknown function (DUF1129); In | 84.04 | |
| KOG2704|consensus | 480 | 82.51 |
| >KOG0380|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=324.78 Aligned_cols=164 Identities=34% Similarity=0.538 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHhcCCChhHHHHh--hcchhHHHHHHHHHHhhhHHHHHHHHH---HHHHHHHHH----------------
Q psy2984 58 DIVADIREIANKHCIPDQELIVL--NMDVVKATERLLKLSVSILHIHLVPIP---LLLISVLCI---------------- 116 (228)
Q Consensus 58 eII~~vk~~~~~~~iPe~e~vf~--~~~~~~~~~r~l~Ls~~~lP~~~~~ll---~~fh~~lN~---------------- 116 (228)
..++.+-.+++++++|..-.+.+ +.|.....++++++++ ||+++||| ++|||||||
T Consensus 317 g~~~l~~~i~~q~~vP~~~n~~~~~~~~~~~~~~~ll~l~i---P~il~~Ll~FY~ifh~~LNa~AEl~rFaDR~FY~DW 393 (523)
T KOG0380|consen 317 GCIFLMVFIFQQWMVPVARNSKDPPFSDASRLIERLLKLMI---PGILIWLLFFYLIFHCWLNAVAELTRFADREFYGDW 393 (523)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcccccchHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHhh
Confidence 34666667889999995322211 1146677888888888 99999999 999999999
Q ss_pred -------------------HHHHhhchhHHhhcCcchhhHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhHHHHHHh
Q psy2984 117 -------------------ISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLS 177 (228)
Q Consensus 117 -------------------wl~rhVY~~~~~~~~sk~~A~~~vF~vSAi~HE~i~~~~~~~~~~~~f~~~~~Q~Pl~~~~ 177 (228)
||+||||+|+++.+.||.+|+++||++||++|||++++++++|++|+|.+||+|+|++.++
T Consensus 394 WNs~s~~~f~R~WN~PVH~wl~RHVY~p~~~~~~sK~~A~l~vF~vSAVfHEy~~~v~l~~Fr~~~f~~~m~Qipl~~~~ 473 (523)
T KOG0380|consen 394 WNSVSWDEFWRTWNVPVHKWLYRHVYKPMLSRGLSKSAATLAVFFVSAVFHEYVVSVPLRIFRPWMFYLFMFQIPLFFFT 473 (523)
T ss_pred hccCcHHHHHHHcCcHHHHHHHHHhhHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCccceeehhhhhhhhhhHHHHHHHHHHHHHHhCCCCcccCC
Q psy2984 178 RHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDKYS 226 (228)
Q Consensus 178 ~~~~~~~~~~~gN~~fW~~l~iG~pl~~~lY~~e~yar~~~~~~~~~~~ 226 (228)
+...++ .+.||++||+++++|||+++++|++|||+|++||+..++..
T Consensus 474 ~~~~~k--~~~gNi~~W~sliiGq~~~v~lY~~~~y~~~~~~~~~~t~~ 520 (523)
T KOG0380|consen 474 ARFFRK--RSLGNIFFWFSLIIGQPLLVLLYYHEWYARRHCPSANETLY 520 (523)
T ss_pred HHHhhc--cccchhHHHHHHHhccHHHHHHHHHHHHHHhcCCcccchhh
Confidence 877653 38999999999999999999999999999999999988754
|
|
| >PLN02401 diacylglycerol o-acyltransferase | Back alignment and domain information |
|---|
| >PLN03242 diacylglycerol o-acyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG5056 ARE1 Acyl-CoA cholesterol acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
| >KOG2297|consensus | Back alignment and domain information |
|---|
| >PF03062 MBOAT: MBOAT, membrane-bound O-acyltransferase family; InterPro: IPR004299 The MBOAT (membrane bound O-acyl transferase) family of membrane proteins contains a variety of acyltransferase enzymes | Back alignment and domain information |
|---|
| >PF13813 MBOAT_2: Membrane bound O-acyl transferase family | Back alignment and domain information |
|---|
| >PLN02332 membrane bound O-acyl transferase (MBOAT) family protein | Back alignment and domain information |
|---|
| >PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues | Back alignment and domain information |
|---|
| >KOG2704|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 228 | |||
| 1ug3_A | 339 | EIF4GI, eukaryotic protein synthesis initiation fa | 98.68 | |
| 3l6a_A | 364 | Eukaryotic translation initiation factor 4 gamma; | 98.55 | |
| 1paq_A | 189 | Translation initiation factor EIF-2B epsilon subun | 93.13 | |
| 3d3m_A | 168 | Eukaryotic translation initiation factor 4 gamma 2 | 87.26 |
| >1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14 | Back alignment and structure |
|---|
Probab=98.68 E-value=8.5e-09 Score=93.22 Aligned_cols=75 Identities=21% Similarity=0.280 Sum_probs=61.1
Q ss_pred CCCCCCCCCChHHHHHHHhhcCchHHHHHHHHHHhH--HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHhcCCChhHHH
Q psy2984 1 MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQASQ--EAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELI 78 (228)
Q Consensus 1 leffP~~kRs~~~f~~~F~~~gL~el~~~~~k~~~~--~~kkeL~~~L~~~i~~~~~~~eII~~vk~~~~~~~iPe~e~v 78 (228)
++|||+++| ++++|+++||+.+++++.+++++ ..+++++++|+++++++.+.++|+..|++-+.++.+++++++
T Consensus 172 ~~f~P~~~~----~~~~~~~~~L~~l~~~~~~~~~~~~~~~~ev~~~L~~~l~~~~~~~~i~~~i~~~~~~~~~~~~~~~ 247 (339)
T 1ug3_A 172 KEFLPEGQD----IGAFVAEQKVEYTLGEESEAPGQRALPSEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLV 247 (339)
T ss_dssp GGTSCTTCC----HHHHHHHTTCGGGC----------CCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCHHHHTCHHHH
T ss_pred HHhCCCchh----HHHHHHHCCceeecCCcccccccccCCHHHHHHHHHHHHHcCCCHHHHHHHHHhcCChhhCChHHHH
Confidence 479999998 78899999999999999988887 678999999999999999999999999999999999988876
Q ss_pred H
Q psy2984 79 V 79 (228)
Q Consensus 79 f 79 (228)
.
T Consensus 248 ~ 248 (339)
T 1ug3_A 248 R 248 (339)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1paq_A Translation initiation factor EIF-2B epsilon subunit; heat repeat, AA motif; 2.30A {Saccharomyces cerevisiae} SCOP: a.118.1.14 | Back alignment and structure |
|---|
| >3d3m_A Eukaryotic translation initiation factor 4 gamma 2; heat repeat domain, structural genomics, PSI, protein structure initiative; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 228 | ||||
| d1ug3a2 | 127 | a.118.1.14 (A:1438-1564) Eukaryotic initiation fac | 5e-04 |
| >d1ug3a2 a.118.1.14 (A:1438-1564) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]} Length = 127 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: MIF4G domain-like domain: Eukaryotic initiation factor eIF4G species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (85), Expect = 5e-04
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 38 AKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLNMDVV 85
+EL QLE+ + EG+S + + I ++ I L+ M V
Sbjct: 3 PSEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLVRALMTAV 50
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 228 | |||
| d1ug3a2 | 127 | Eukaryotic initiation factor eIF4G {Human (Homo sa | 92.31 | |
| d1paqa_ | 161 | Translation initiation factor eIF-2b epsilon {Bake | 81.61 |
| >d1ug3a2 a.118.1.14 (A:1438-1564) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: MIF4G domain-like domain: Eukaryotic initiation factor eIF4G species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.31 E-value=0.038 Score=40.93 Aligned_cols=41 Identities=27% Similarity=0.362 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHhcCCChhHHH
Q psy2984 38 AKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELI 78 (228)
Q Consensus 38 ~kkeL~~~L~~~i~~~~~~~eII~~vk~~~~~~~iPe~e~v 78 (228)
-.++++++|.++++++.++++|+..|++-+.+..+++.++|
T Consensus 3 ~~~~l~~~L~~~l~e~~~~~~i~~wIk~~~~~~~~~~~~~i 43 (127)
T d1ug3a2 3 PSEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLV 43 (127)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCHHHHTCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHHHhcccccCCChHHH
Confidence 36899999999999999999999999999998888876654
|
| >d1paqa_ a.118.1.14 (A:) Translation initiation factor eIF-2b epsilon {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|