Psyllid ID: psy2984


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCIISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDKYSHV
ccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
ccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcHccccc
mefvppnkrsdeYFRTVFEEKGLADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANkhcipdqelIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCIISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHvekkygprwgnIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDKYSHV
mefvppnkrsdeyfRTVFEEKGLADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKhcipdqelIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCIISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDKYSHV
MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMAqasqeakkelqeqleeqiseGASIKDIVADIREIANKHCIPDQELIVLNMDVVKATERLLKLSVSilhihlvpiplllisvlciiscRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDKYSHV
************YFRTVFEEKGLADIVKLH************************SIKDIVADIREIANKHCIPDQELIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCIISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLD*****
MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQAS**********LEEQISEGASIKDIVADIREIANKHCIPDQELIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCIISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEAL*******
MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMA****************QISEGASIKDIVADIREIANKHCIPDQELIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCIISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDKYSHV
*EFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCIISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDK*S**
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
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MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMxxxxxxxxxxxxxxxxxxxxxGASIKDIVADIREIANKHCIPDQELIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCIISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDKYSHV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query228 2.2.26 [Sep-21-2011]
Q8MK44489 Diacylglycerol O-acyltran yes N/A 0.412 0.192 0.484 6e-23
O75907488 Diacylglycerol O-acyltran yes N/A 0.416 0.194 0.489 6e-23
Q9GMF1491 Diacylglycerol O-acyltran N/A N/A 0.416 0.193 0.489 1e-22
Q9Z2A7498 Diacylglycerol O-acyltran yes N/A 0.416 0.190 0.459 5e-22
Q9ERM3498 Diacylglycerol O-acyltran yes N/A 0.416 0.190 0.438 1e-21
Q9SLD2520 Diacylglycerol O-acyltran yes N/A 0.403 0.176 0.387 2e-17
Q9VNE2422 Protein extra bases OS=Dr no N/A 0.350 0.189 0.512 3e-17
Q55BH9617 Diacylglycerol O-acyltran yes N/A 0.407 0.150 0.368 7e-16
Q6PD83419 Basic leucine zipper and no N/A 0.342 0.186 0.435 6e-11
Q5ZLT7418 Basic leucine zipper and yes N/A 0.350 0.191 0.387 3e-08
>sp|Q8MK44|DGAT1_BOVIN Diacylglycerol O-acyltransferase 1 OS=Bos taurus GN=DGAT1 PE=2 SV=2 Back     alignment and function desciption
 Score =  107 bits (267), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 3/97 (3%)

Query: 120 RHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRH 179
           RH YKP++ +G S+  A + VF  SAF HEYLVS+PLR +++WAF GMM QIPL+ +   
Sbjct: 388 RHFYKPMLRRGSSKWAARTAVFLASAFFHEYLVSIPLRMFRLWAFTGMMAQIPLAWI--- 444

Query: 180 VEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITH 216
           V + +   +GN  VW SLI+GQP+ ++MY HD+ + +
Sbjct: 445 VGRFFRGNYGNAAVWLSLIIGQPVAVLMYVHDYYVLN 481




Catalyzes the terminal and only committed step in triacylglycerol synthesis by using diacylglycerol and fatty acyl CoA as substrates. In contrast to DGAT2 it is not essential for survival. May be involved in VLDL (very low density lipoprotein) assembly.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 2EC: 0
>sp|O75907|DGAT1_HUMAN Diacylglycerol O-acyltransferase 1 OS=Homo sapiens GN=DGAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9GMF1|DGAT1_CHLAE Diacylglycerol O-acyltransferase 1 OS=Chlorocebus aethiops GN=DGAT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Z2A7|DGAT1_MOUSE Diacylglycerol O-acyltransferase 1 OS=Mus musculus GN=Dgat1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ERM3|DGAT1_RAT Diacylglycerol O-acyltransferase 1 OS=Rattus norvegicus GN=Dgat1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SLD2|DGAT1_ARATH Diacylglycerol O-acyltransferase 1 OS=Arabidopsis thaliana GN=DGAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9VNE2|EXBA_DROME Protein extra bases OS=Drosophila melanogaster GN=exba PE=1 SV=1 Back     alignment and function description
>sp|Q55BH9|DGAT1_DICDI Diacylglycerol O-acyltransferase 1 OS=Dictyostelium discoideum GN=dgat1 PE=3 SV=2 Back     alignment and function description
>sp|Q6PD83|BZW1A_DANRE Basic leucine zipper and W2 domain-containing protein 1-A OS=Danio rerio GN=bzw1a PE=2 SV=1 Back     alignment and function description
>sp|Q5ZLT7|BZW1_CHICK Basic leucine zipper and W2 domain-containing protein 1 OS=Gallus gallus GN=BZW1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query228
110762262 498 PREDICTED: diacylglycerol O-acyltransfer 0.692 0.317 0.502 4e-45
383857805 498 PREDICTED: diacylglycerol O-acyltransfer 0.649 0.297 0.524 9e-45
345483246 501 PREDICTED: diacylglycerol O-acyltransfer 0.649 0.295 0.540 2e-44
307189845 495 Diacylglycerol O-acyltransferase 1 [Camp 0.649 0.298 0.524 2e-44
350403310 498 PREDICTED: diacylglycerol O-acyltransfer 0.692 0.317 0.492 3e-44
340723317 498 PREDICTED: diacylglycerol O-acyltransfer 0.692 0.317 0.492 3e-44
332019570182 Diacylglycerol O-acyltransferase 1 [Acro 0.644 0.807 0.521 3e-43
307208007182 Diacylglycerol O-acyltransferase 1 [Harp 0.635 0.796 0.522 7e-43
91083363 492 PREDICTED: similar to sterol o-acyltrans 0.649 0.300 0.508 3e-42
195115022 561 GI14192 [Drosophila mojavensis] gi|19391 0.618 0.251 0.517 8e-40
>gi|110762262|ref|XP_624754.2| PREDICTED: diacylglycerol O-acyltransferase 1 [Apis mellifera] Back     alignment and taxonomy information
 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/193 (50%), Positives = 122/193 (63%), Gaps = 35/193 (18%)

Query: 71  CIPDQELIVLNMDVVKATERLLKLSVSILHIHLVPIPLLLISVLCII------------- 117
           C+ +  +   NMDV KA+ERLLKL++    + L    L   S+L ++             
Sbjct: 306 CVKNSLVPFSNMDVAKASERLLKLAIPNHLVWLCFFYLTFHSLLNLVGELLHFADRNFYC 365

Query: 118 ----------------------SCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVP 155
                                 + RHLY P++E GY + TAS  VFFISAF HEYLVSVP
Sbjct: 366 DWWNAHNIDIFWRTWNMPVHRWAVRHLYIPIIEMGYKKNTASVTVFFISAFFHEYLVSVP 425

Query: 156 LRTYKIWAFMGMMGQIPLSMLSRHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVIT 215
           L+T+K WAF+GMMGQIPLSM+S+ VEK +G RWGNI VW+SLI+GQPLCIMMYYHD+VIT
Sbjct: 426 LKTFKTWAFLGMMGQIPLSMISKKVEKHWGARWGNITVWASLIIGQPLCIMMYYHDYVIT 485

Query: 216 HFGEALLDKYSHV 228
           HFGE L++ YS V
Sbjct: 486 HFGENLIEDYSVV 498




Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857805|ref|XP_003704394.1| PREDICTED: diacylglycerol O-acyltransferase 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|345483246|ref|XP_001600993.2| PREDICTED: diacylglycerol O-acyltransferase 1-like isoform 1 [Nasonia vitripennis] gi|345483248|ref|XP_003424778.1| PREDICTED: diacylglycerol O-acyltransferase 1-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307189845|gb|EFN74110.1| Diacylglycerol O-acyltransferase 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|350403310|ref|XP_003486764.1| PREDICTED: diacylglycerol O-acyltransferase 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340723317|ref|XP_003400037.1| PREDICTED: diacylglycerol O-acyltransferase 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|332019570|gb|EGI60049.1| Diacylglycerol O-acyltransferase 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307208007|gb|EFN85566.1| Diacylglycerol O-acyltransferase 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|91083363|ref|XP_975142.1| PREDICTED: similar to sterol o-acyltransferase [Tribolium castaneum] gi|270007773|gb|EFA04221.1| hypothetical protein TcasGA2_TC014471 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|195115022|ref|XP_002002066.1| GI14192 [Drosophila mojavensis] gi|193912641|gb|EDW11508.1| GI14192 [Drosophila mojavensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query228
FB|FBgn0004797615 mdy "midway" [Drosophila melan 0.447 0.165 0.696 3.7e-40
WB|WBGene00010408496 mboa-2 [Caenorhabditis elegans 0.425 0.195 0.555 4e-31
ZFIN|ZDB-GENE-030131-4600499 dgat1a "diacylglycerol O-acylt 0.425 0.194 0.519 3.7e-28
ZFIN|ZDB-GENE-040718-158507 dgat1b "diacylglycerol O-acylt 0.429 0.193 0.543 4.9e-28
UNIPROTKB|E2RDN4489 DGAT1 "O-acyltransferase" [Can 0.416 0.194 0.479 2.4e-25
UNIPROTKB|F1RSM6489 DGAT1 "O-acyltransferase" [Sus 0.412 0.192 0.494 9e-25
UNIPROTKB|Q8MK44489 DGAT1 "Diacylglycerol O-acyltr 0.403 0.188 0.494 1.2e-24
UNIPROTKB|O75907488 DGAT1 "Diacylglycerol O-acyltr 0.416 0.194 0.489 1.9e-24
MGI|MGI:1333825498 Dgat1 "diacylglycerol O-acyltr 0.416 0.190 0.459 2.3e-23
RGD|628673498 Dgat1 "diacylglycerol O-acyltr 0.416 0.190 0.438 6.4e-23
FB|FBgn0004797 mdy "midway" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 394 (143.8 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
 Identities = 71/102 (69%), Positives = 84/102 (82%)

Query:   120 RHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLSRH 179
             RHLY P+V+ GYS   AS++VF  SA  HEYLVSVPL+ YKIWAFMGMMGQIPLS +S+ 
Sbjct:   507 RHLYIPVVQMGYSSRQASTIVFLFSAVFHEYLVSVPLQIYKIWAFMGMMGQIPLSAISKS 566

Query:   180 VEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEAL 221
             +EKK GPR GNIIVW+S+ILGQPLCIM YYHD+V+ HF  +L
Sbjct:   567 IEKKLGPRMGNIIVWASIILGQPLCIMAYYHDYVVQHFKNSL 608


GO:0048477 "oogenesis" evidence=IMP
GO:0004772 "sterol O-acyltransferase activity" evidence=ISS
GO:0004144 "diacylglycerol O-acyltransferase activity" evidence=ISS;IDA;NAS
GO:0045477 "regulation of nurse cell apoptotic process" evidence=IMP
GO:0019432 "triglyceride biosynthetic process" evidence=ISS
GO:0010888 "negative regulation of lipid storage" evidence=IDA
GO:0035220 "wing disc development" evidence=IGI
WB|WBGene00010408 mboa-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-4600 dgat1a "diacylglycerol O-acyltransferase homolog 1a (mouse)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-158 dgat1b "diacylglycerol O-acyltransferase homolog 1b (mouse)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDN4 DGAT1 "O-acyltransferase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RSM6 DGAT1 "O-acyltransferase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q8MK44 DGAT1 "Diacylglycerol O-acyltransferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O75907 DGAT1 "Diacylglycerol O-acyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1333825 Dgat1 "diacylglycerol O-acyltransferase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|628673 Dgat1 "diacylglycerol O-acyltransferase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query228
cd11560194 cd11560, W2_eIF5C_like, C-terminal W2 domain of th 5e-26
PLN02401446 PLN02401, PLN02401, diacylglycerol o-acyltransfera 2e-23
PLN03242410 PLN03242, PLN03242, diacylglycerol o-acyltransfera 4e-22
COG5056512 COG5056, ARE1, Acyl-CoA cholesterol acyltransferas 2e-10
>gnl|CDD|211398 cd11560, W2_eIF5C_like, C-terminal W2 domain of the eukaryotic translation initiation factor 5C and similar proteins Back     alignment and domain information
 Score = 99.6 bits (249), Expect = 5e-26
 Identities = 36/79 (45%), Positives = 58/79 (73%)

Query: 2  EFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQASQEAKKELQEQLEEQISEGASIKDIVA 61
          EF PPNKR++E+F   F+E+GL ++V+ +  QASQE KKELQ++L+E I+E   +K+I+A
Sbjct: 1  EFFPPNKRTEEHFAEHFKEEGLDELVEFYRKQASQEIKKELQQELKEMIAEEEPVKEIIA 60

Query: 62 DIREIANKHCIPDQELIVL 80
           ++E   K  +P+ E++ L
Sbjct: 61 AVKEQMKKSSLPEHEVVGL 79


eIF5C appears to be essential for the initiation of protein translation; its actual function, and specifically that of the C-terminal W2 domain, are not well understood. The Drosophila ortholog, kra (krasavietz) or exba (extra bases), may be involved in translational inhibition in neural development. The structure of this C-terminal domain resembles that of a set of concatenated HEAT repeats. Length = 194

>gnl|CDD|215225 PLN02401, PLN02401, diacylglycerol o-acyltransferase Back     alignment and domain information
>gnl|CDD|178780 PLN03242, PLN03242, diacylglycerol o-acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|227389 COG5056, ARE1, Acyl-CoA cholesterol acyltransferase [Lipid metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 228
KOG0380|consensus523 100.0
PLN02401446 diacylglycerol o-acyltransferase 100.0
PLN03242410 diacylglycerol o-acyltransferase; Provisional 100.0
COG5056512 ARE1 Acyl-CoA cholesterol acyltransferase [Lipid m 99.96
KOG2297|consensus412 99.87
PF03062322 MBOAT: MBOAT, membrane-bound O-acyltransferase fam 99.02
PF1381383 MBOAT_2: Membrane bound O-acyl transferase family 95.49
PLN02332465 membrane bound O-acyl transferase (MBOAT) family p 91.93
PF06570206 DUF1129: Protein of unknown function (DUF1129); In 84.04
KOG2704|consensus480 82.51
>KOG0380|consensus Back     alignment and domain information
Probab=100.00  E-value=8.4e-42  Score=324.78  Aligned_cols=164  Identities=34%  Similarity=0.538  Sum_probs=145.3

Q ss_pred             HHHHHHHHHHHhcCCChhHHHHh--hcchhHHHHHHHHHHhhhHHHHHHHHH---HHHHHHHHH----------------
Q psy2984          58 DIVADIREIANKHCIPDQELIVL--NMDVVKATERLLKLSVSILHIHLVPIP---LLLISVLCI----------------  116 (228)
Q Consensus        58 eII~~vk~~~~~~~iPe~e~vf~--~~~~~~~~~r~l~Ls~~~lP~~~~~ll---~~fh~~lN~----------------  116 (228)
                      ..++.+-.+++++++|..-.+.+  +.|.....++++++++   ||+++|||   ++|||||||                
T Consensus       317 g~~~l~~~i~~q~~vP~~~n~~~~~~~~~~~~~~~ll~l~i---P~il~~Ll~FY~ifh~~LNa~AEl~rFaDR~FY~DW  393 (523)
T KOG0380|consen  317 GCIFLMVFIFQQWMVPVARNSKDPPFSDASRLIERLLKLMI---PGILIWLLFFYLIFHCWLNAVAELTRFADREFYGDW  393 (523)
T ss_pred             HHHHHHHHHHHHHhhHHHHHhcccccchHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHhh
Confidence            34666667889999995322211  1146677888888888   99999999   999999999                


Q ss_pred             -------------------HHHHhhchhHHhhcCcchhhHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhHHHHHHh
Q psy2984         117 -------------------ISCRHLYKPLVEQGYSRLTASSLVFFISAFMHEYLVSVPLRTYKIWAFMGMMGQIPLSMLS  177 (228)
Q Consensus       117 -------------------wl~rhVY~~~~~~~~sk~~A~~~vF~vSAi~HE~i~~~~~~~~~~~~f~~~~~Q~Pl~~~~  177 (228)
                                         ||+||||+|+++.+.||.+|+++||++||++|||++++++++|++|+|.+||+|+|++.++
T Consensus       394 WNs~s~~~f~R~WN~PVH~wl~RHVY~p~~~~~~sK~~A~l~vF~vSAVfHEy~~~v~l~~Fr~~~f~~~m~Qipl~~~~  473 (523)
T KOG0380|consen  394 WNSVSWDEFWRTWNVPVHKWLYRHVYKPMLSRGLSKSAATLAVFFVSAVFHEYVVSVPLRIFRPWMFYLFMFQIPLFFFT  473 (523)
T ss_pred             hccCcHHHHHHHcCcHHHHHHHHHhhHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                               9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCccceeehhhhhhhhhhHHHHHHHHHHHHHHhCCCCcccCC
Q psy2984         178 RHVEKKYGPRWGNIIVWSSLILGQPLCIMMYYHDFVITHFGEALLDKYS  226 (228)
Q Consensus       178 ~~~~~~~~~~~gN~~fW~~l~iG~pl~~~lY~~e~yar~~~~~~~~~~~  226 (228)
                      +...++  .+.||++||+++++|||+++++|++|||+|++||+..++..
T Consensus       474 ~~~~~k--~~~gNi~~W~sliiGq~~~v~lY~~~~y~~~~~~~~~~t~~  520 (523)
T KOG0380|consen  474 ARFFRK--RSLGNIFFWFSLIIGQPLLVLLYYHEWYARRHCPSANETLY  520 (523)
T ss_pred             HHHhhc--cccchhHHHHHHHhccHHHHHHHHHHHHHHhcCCcccchhh
Confidence            877653  38999999999999999999999999999999999988754



>PLN02401 diacylglycerol o-acyltransferase Back     alignment and domain information
>PLN03242 diacylglycerol o-acyltransferase; Provisional Back     alignment and domain information
>COG5056 ARE1 Acyl-CoA cholesterol acyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG2297|consensus Back     alignment and domain information
>PF03062 MBOAT: MBOAT, membrane-bound O-acyltransferase family; InterPro: IPR004299 The MBOAT (membrane bound O-acyl transferase) family of membrane proteins contains a variety of acyltransferase enzymes Back     alignment and domain information
>PF13813 MBOAT_2: Membrane bound O-acyl transferase family Back     alignment and domain information
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein Back     alignment and domain information
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues Back     alignment and domain information
>KOG2704|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query228
1ug3_A339 EIF4GI, eukaryotic protein synthesis initiation fa 98.68
3l6a_A364 Eukaryotic translation initiation factor 4 gamma; 98.55
1paq_A189 Translation initiation factor EIF-2B epsilon subun 93.13
3d3m_A168 Eukaryotic translation initiation factor 4 gamma 2 87.26
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14 Back     alignment and structure
Probab=98.68  E-value=8.5e-09  Score=93.22  Aligned_cols=75  Identities=21%  Similarity=0.280  Sum_probs=61.1

Q ss_pred             CCCCCCCCCChHHHHHHHhhcCchHHHHHHHHHHhH--HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHhcCCChhHHH
Q psy2984           1 MEFVPPNKRSDEYFRTVFEEKGLADIVKLHMAQASQ--EAKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELI   78 (228)
Q Consensus         1 leffP~~kRs~~~f~~~F~~~gL~el~~~~~k~~~~--~~kkeL~~~L~~~i~~~~~~~eII~~vk~~~~~~~iPe~e~v   78 (228)
                      ++|||+++|    ++++|+++||+.+++++.+++++  ..+++++++|+++++++.+.++|+..|++-+.++.+++++++
T Consensus       172 ~~f~P~~~~----~~~~~~~~~L~~l~~~~~~~~~~~~~~~~ev~~~L~~~l~~~~~~~~i~~~i~~~~~~~~~~~~~~~  247 (339)
T 1ug3_A          172 KEFLPEGQD----IGAFVAEQKVEYTLGEESEAPGQRALPSEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLV  247 (339)
T ss_dssp             GGTSCTTCC----HHHHHHHTTCGGGC----------CCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCHHHHTCHHHH
T ss_pred             HHhCCCchh----HHHHHHHCCceeecCCcccccccccCCHHHHHHHHHHHHHcCCCHHHHHHHHHhcCChhhCChHHHH
Confidence            479999998    78899999999999999988887  678999999999999999999999999999999999988876


Q ss_pred             H
Q psy2984          79 V   79 (228)
Q Consensus        79 f   79 (228)
                      .
T Consensus       248 ~  248 (339)
T 1ug3_A          248 R  248 (339)
T ss_dssp             H
T ss_pred             H
Confidence            3



>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens} Back     alignment and structure
>1paq_A Translation initiation factor EIF-2B epsilon subunit; heat repeat, AA motif; 2.30A {Saccharomyces cerevisiae} SCOP: a.118.1.14 Back     alignment and structure
>3d3m_A Eukaryotic translation initiation factor 4 gamma 2; heat repeat domain, structural genomics, PSI, protein structure initiative; 1.90A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 228
d1ug3a2127 a.118.1.14 (A:1438-1564) Eukaryotic initiation fac 5e-04
>d1ug3a2 a.118.1.14 (A:1438-1564) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]} Length = 127 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: MIF4G domain-like
domain: Eukaryotic initiation factor eIF4G
species: Human (Homo sapiens) [TaxId: 9606]
 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 38 AKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELIVLNMDVV 85
            +EL  QLE+ + EG+S + +   I    ++  I    L+   M  V
Sbjct: 3  PSEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLVRALMTAV 50


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query228
d1ug3a2127 Eukaryotic initiation factor eIF4G {Human (Homo sa 92.31
d1paqa_161 Translation initiation factor eIF-2b epsilon {Bake 81.61
>d1ug3a2 a.118.1.14 (A:1438-1564) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: MIF4G domain-like
domain: Eukaryotic initiation factor eIF4G
species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.31  E-value=0.038  Score=40.93  Aligned_cols=41  Identities=27%  Similarity=0.362  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHhcCCChhHHH
Q psy2984          38 AKKELQEQLEEQISEGASIKDIVADIREIANKHCIPDQELI   78 (228)
Q Consensus        38 ~kkeL~~~L~~~i~~~~~~~eII~~vk~~~~~~~iPe~e~v   78 (228)
                      -.++++++|.++++++.++++|+..|++-+.+..+++.++|
T Consensus         3 ~~~~l~~~L~~~l~e~~~~~~i~~wIk~~~~~~~~~~~~~i   43 (127)
T d1ug3a2           3 PSEELNRQLEKLLKEGSSNQRVFDWIEANLSEQQIVSNTLV   43 (127)
T ss_dssp             HHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCHHHHTCHHHH
T ss_pred             CHHHHHHHHHHHHHcCCCHHHHHHHHHHhcccccCCChHHH
Confidence            36899999999999999999999999999998888876654



>d1paqa_ a.118.1.14 (A:) Translation initiation factor eIF-2b epsilon {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure