Psyllid ID: psy3027

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Protein Sequence
LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALFGI
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHcccccEEEEcccEEEEEccccccccccccccccHHHHHHHHccEEEEEEcccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHcccccccccccEEEEccccHHHHHHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHcccccccEEEEEEEcccHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHcccccEEEEEccEEEccccccccccEcccccccEEEEEccccEEEEEEcccccEEcEccHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHHHHHcccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEcccHHHHHHHHHccHHHHHHccccHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
llhewpntyTFTKALAEDVlckegkglplavlrpavivstyrepvrgwidnvygpiGMLVGIATGVLHTHLINlntvtdmvpstvsdgpsegvwqkkfptsvfrpdpipiynfvgsarnpiswgkldelatvchpiwptIRAIWYFsfipasnkyTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQalfnkldpedqelfffDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALFGI
Flexible Loop (DISEMBL)
llhewpntYTFTKALAEDVLCKEGKGlplavlrpavivstyrepvrGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALFGI
Low Complexity Region (SEG)
LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGllllvfllYIVQALFGI
Disordered region (IsUnstruct)
****WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV*****EGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALF**
Disordered Region (DISOPRED)
LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALFGI
Disordered Region (DISEMBL)
LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALFGI
Disordered Region (DISPRO)
*LHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALFG*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALFGI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	300	2.2.26 [Sep-21-2011]
A1ZAI5	625	Putative fatty acyl-CoA r	no	N/A	0.956	0.459	0.373	4e-51
Q8WVX9	515	Fatty acyl-CoA reductase	yes	N/A	0.966	0.563	0.326	9e-43
Q922J9	515	Fatty acyl-CoA reductase	yes	N/A	0.966	0.563	0.323	1e-42
Q0P5J1	515	Fatty acyl-CoA reductase	no	N/A	0.97	0.565	0.317	1e-42
Q5R834	515	Fatty acyl-CoA reductase	yes	N/A	0.966	0.563	0.326	1e-42
Q7ZXF5	515	Fatty acyl-CoA reductase	N/A	N/A	0.89	0.518	0.327	2e-42
Q5ZM72	515	Fatty acyl-CoA reductase	yes	N/A	0.966	0.563	0.316	1e-41
Q96K12	515	Fatty acyl-CoA reductase	no	N/A	0.903	0.526	0.322	1e-41
Q66H50	515	Fatty acyl-CoA reductase	yes	N/A	0.966	0.563	0.323	1e-40
Q7TNT2	515	Fatty acyl-CoA reductase	no	N/A	0.96	0.559	0.321	1e-38

>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1

 Score =  201 bits (512), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 109/292 (37%), Positives = 161/292 (55%), Gaps = 5/292 (1%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTYTFTKALAE +L KE   LP+A++RP+++ ++  EP  GW+DN  GP G++ 
Sbjct: 311 LIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVS 370

Query: 61  GIATGVLHTHLINLNTVTDMVP-STVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
            +A G+  T +   N V DMVP   V +      W+    T+  + + + IYN     RN
Sbjct: 371 ALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAWR----TATRKSNNLLIYNCCTGQRN 426

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           PI W +  + A       P    +WY +     N+    +     H +P +ILD +A + 
Sbjct: 427 PIIWSEFVKHAMTSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIM 486

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           G+KP ++ +  KI KA + LEYFA RQW + D NV AL + L P+D+E+F FD+  + W+
Sbjct: 487 GKKPFVVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWD 546

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLL 291
            Y E   LG R +L      +LPA+RK+  RLY  H   K+   LL   FL+
Sbjct: 547 KYVERYVLGFREFLFKQRPESLPASRKRMLRLYYLHQLTKLVAVLLTWRFLM 598

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2

>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1

 Score =  174 bits (440), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 7/297 (2%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTY +TKALAE V+ +EG  L +A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct: 196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPS-EGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
               G+L T   + N + D+VP  V    S    W     + V RP  I +YN    + N
Sbjct: 256 AAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWY----SGVNRPRNIMVYNCTTGSTN 311

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           P  WG+++          P  +A    +    SN   Y+      H  P F+ D    ++
Sbjct: 312 PFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMT 371

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           GR P +M    ++ KA   LEYF    WVW   NV  L N+L+PED++ F  D+ Q+ W 
Sbjct: 372 GRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKTFNIDVRQLHWA 431

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQA 296
            Y E   LG + Y++++++  LPAARK   +L            L++L++ ++I ++
Sbjct: 432 EYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI--LVILIWRIFIARS 486

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1

 Score =  174 bits (440), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 7/297 (2%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTY +TKALAE V+ +EG  L +A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct: 196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPS-EGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
               G+L T   + N + D+VP  V    S    W     + V RP  I +YN    + N
Sbjct: 256 AAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWY----SGVNRPRNIMVYNCTTGSTN 311

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           P  WG+++          P  +A    +    SN   Y+      H  P F+ D    ++
Sbjct: 312 PFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMT 371

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           GR P +M    ++ KA   LEYF    WVW   NV  L N+L+PED++ F  D+ Q+ W 
Sbjct: 372 GRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWA 431

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQA 296
            Y E   +G + Y++++++  LPAARK   +L            L++L++ ++I ++
Sbjct: 432 EYIENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI--LVILIWRIFIARS 486

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 156/296 (52%), Gaps = 5/296 (1%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ +WPNTYT+TKAL E V+ +EG  L +A++RP+++ +T++EP  GW+DN+ GP G+++
Sbjct: 196 LIGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLII 255

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNP 120
               G L +       V D++P+      +  V    + T+V RP    +Y+      NP
Sbjct: 256 AAGKGFLRSIRATPMAVADLIPADTVVNLTLAV---GWYTAVHRPKSTLVYHCTSGNLNP 312

Query: 121 ISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSG 180
            +WGK+           P  RA    +    +N  T +  +   H  P  I D    L+G
Sbjct: 313 CNWGKMGLQVLATFEKIPFERAFRRPNADFTTNNITTHYWNAVSHRAPAIIYDFYLRLTG 372

Query: 181 RKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEY 240
           RKP +  +  ++ +    LEYF +R W W+ +N + L ++L PEDQ +F FD+ Q+ W  
Sbjct: 373 RKPRMTKLMNRLLRTLSMLEYFVNRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLE 432

Query: 241 YAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQA 296
           Y E   LG++ YL+ +D+  +P A++  +RL   H        L L+ + L I ++
Sbjct: 433 YIENYVLGVKKYLLKEDMAGIPEAKQHLKRLRNIHYLFN--TALFLIAWRLLIARS 486

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 7/297 (2%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTY +TKALAE V+ +EG  L +A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct: 196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPS-EGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
               G+L T   + N + D+VP  V    S    W     + V RP  I +YN    + N
Sbjct: 256 AAGKGILRTIRASNNALADLVPVDVVVNMSLAAAWY----SGVNRPRNIMVYNCTTGSTN 311

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           P  WG+++          P  +A    +    SN   Y+      H  P F+ D    ++
Sbjct: 312 PFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMT 371

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           GR P +M    ++ KA   LEYF    WVW   NV  L N+L+PED++ F  D+ Q+ W 
Sbjct: 372 GRSPRMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWA 431

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQA 296
            Y E   LG + Y++++++  LPAARK   +L            L++L++ ++I ++
Sbjct: 432 EYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI--LVILIWRIFIARS 486

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1

 Score =  173 bits (438), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 144/272 (52%), Gaps = 5/272 (1%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTYT+TKALAE V+ +EG  L +A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct: 196 LIGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query: 61  GIATGVLHTHLINLNTVTDMVP-STVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
               G+L T   + N V D++P   V +      W     + V RP  + +YN      N
Sbjct: 256 AAGKGILRTMRASNNAVADLIPVDVVVNTTLAAAWY----SGVNRPKNMLVYNCTTGGTN 311

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           P  WG+++          P  +A    +    SN   Y+      H  P  + D    ++
Sbjct: 312 PFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPALLYDVYLRIT 371

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           GR P +M    ++ +A   LEYF    WVW + N   L ++L PED+++F FD+ Q+ W 
Sbjct: 372 GRSPRMMKTITRLHRAMMLLEYFTSNSWVWNNENTNMLMSQLSPEDKKVFNFDVRQLHWA 431

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRL 271
            Y E   +G + Y++++++  LPAARK   +L
Sbjct: 432 EYMENYCMGTKKYVLNEEMSGLPAARKHLNKL 463

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1

 Score =  170 bits (430), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 152/297 (51%), Gaps = 7/297 (2%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTYT+TKALAE V+ +EG  L  A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct: 196 LIGDRPNTYTYTKALAEYVVQQEGARLNTAIIRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query: 61  GIATGVLHTHLINLNTVTDMVP-STVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
               G+L T   +   V D+VP   V +      W     + V RP  I +YN      N
Sbjct: 256 AAGKGILRTMRASNGAVADLVPVDVVVNMTLAAAWY----SGVNRPRNIMVYNCTTGGTN 311

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           P  W +++          P  +A    +    SN   Y+      H  P F+ D    ++
Sbjct: 312 PFHWSEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRIT 371

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           GR P +M    ++ KA   LEYF    W+W   N+  L N+L PED++ F FD+ Q+ W 
Sbjct: 372 GRSPRMMKTITRLHKAMVFLEYFTSNSWIWNTENMTMLMNQLSPEDKKTFNFDVRQLHWA 431

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQA 296
            Y E   +G + Y++++++  LPAARK   +L            L++L++ ++I ++
Sbjct: 432 EYMENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI--LVILIWRIFIARS 486

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1

 Score =  170 bits (430), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 145/276 (52%), Gaps = 5/276 (1%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ +WPN YT+TKAL E V+ +E + L +A++RP+++ +T++EP  GW+DN+ GP G+++
Sbjct: 196 LIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIII 255

Query: 61  GIATGVLHTHLINLNTVTDMVP-STVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
               G L         V D++P  TV +      W     T+V RP    +Y+      N
Sbjct: 256 ATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWY----TAVHRPKSTLVYHITSGNMN 311

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           P +W K+           P  R     +    SN +T    +   H  P  I D    L+
Sbjct: 312 PCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAPAIIYDCYLRLT 371

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           GRKP +  +  ++ +    LEYF +R W W+ +N + L ++L PEDQ +F FD+ Q+ W 
Sbjct: 372 GRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWL 431

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAH 275
            Y E   LG++ YL+ +D+  +P A+++ +RL   H
Sbjct: 432 EYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIH 467

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1

 Score =  166 bits (421), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 156/297 (52%), Gaps = 7/297 (2%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTY +TKALAE V+ +EG  L +A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct: 196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPS-EGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
               G+L T   + N + D+VP  V    S    W     + V RP  I +YN    + N
Sbjct: 256 AAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWY----SGVNRPRNIMVYNCTTGSTN 311

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           P  WG++ +         P  +   +      SN    +      HT+P  +LD    L+
Sbjct: 312 PFHWGEVGDYLNHSFKTNPLNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRLT 371

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           G+KP +M    ++ KA   LEYF    WVW   NV  L N+L+PED++ F  D+ Q+ W 
Sbjct: 372 GQKPWMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHWA 431

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQA 296
            Y E   +G + Y++++++  LPAARK   +L            L++L++ ++I ++
Sbjct: 432 EYIENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTI--LVILIWRIFIARS 486

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1

 Score =  160 bits (405), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 159/299 (53%), Gaps = 11/299 (3%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTYT+TKAL E V+ +E   L +A++RP+++ +T++EP  GW+DN+ GP G+++
Sbjct: 196 LIGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLII 255

Query: 61  GIATGVLHTHLINLNTVTDMVP-STVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
               G L +       V D++P  TV +      W     T+V RP    IY+      N
Sbjct: 256 ATGKGFLRSIKATPMAVADVIPVDTVVNLTIAVGWY----TAVHRPKSTLIYHSTSGNLN 311

Query: 120 PISWGK--LDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLAS 177
           P +W K  L  LAT+     P   A    +    ++ +T +  +   H +P  I D    
Sbjct: 312 PCNWYKMGLQVLATIEK--IPFESAFRRPNADFTTSNFTTHYWNTVSHRVPAIIYDFYLR 369

Query: 178 LSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMK 237
           L+GRKP ++ +  ++ K    LEYF +  W W+ +N + L ++L PEDQ +F FD+ Q+ 
Sbjct: 370 LTGRKPRMLKLMNRLLKTISMLEYFINHSWEWSTNNTEMLLSELSPEDQRVFNFDVRQLN 429

Query: 238 WEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQA 296
           W  Y E   LG++ YL+ +D+  +P A++  +RL   H        L L+++ L I ++
Sbjct: 430 WLEYIENYVLGVKKYLLKEDLAGIPKAKQHLRRLRNIHYLFN--TALFLIIWRLLIARS 486

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	300
193622556	551	PREDICTED: putative fatty acyl-CoA reduc	0.953	0.519	0.506	2e-82
328720028	553	PREDICTED: putative fatty acyl-CoA reduc	0.976	0.529	0.517	7e-80
328720032	499	PREDICTED: putative fatty acyl-CoA reduc	0.976	0.587	0.510	4e-79
326510115	552	predicted protein [Hordeum vulgare subsp	0.963	0.523	0.476	2e-70
328720030	552	PREDICTED: putative fatty acyl-CoA reduc	0.963	0.523	0.480	4e-70
298402911	626	fatty-acyl CoA reductase 2 [Ostrinia nub	1.0	0.479	0.413	2e-65
157114336	530	hypothetical protein AaeL_AAEL006774 [Ae	0.99	0.560	0.409	3e-63
170067375	564	conserved hypothetical protein [Culex qu	0.953	0.507	0.402	6e-62
158300988	528	AGAP011736-PA [Anopheles gambiae str. PE	0.926	0.526	0.431	7e-62
242006084	521	conserved hypothetical protein [Pediculu	0.98	0.564	0.428	1e-60

>gi|193622556|ref|XP_001950244.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum]

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/292 (50%), Positives = 204/292 (69%), Gaps = 6/292 (2%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           ++ + PNTY FTK+LAED + +E + LP+ V RP V+++TYREPVRGWIDNVYGP G++V
Sbjct: 250 IIGDLPNTYAFTKSLAEDAIRREAQDLPILVFRPTVVIATYREPVRGWIDNVYGPTGLIV 309

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNP 120
           G  TGVLHT+  + N +TDM+P  V    +  +   K   +  + D IPIY    +A+ P
Sbjct: 310 GAGTGVLHTYFGDSNIITDMIP--VDMVVNALICATKETATNNKDDEIPIYTCSSAAQKP 367

Query: 121 ISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSG 180
           I W    E+       WPTIRAIWY+SF   +N Y Y +L+FF H +PG++LD+LA ++G
Sbjct: 368 IKWNDFIEMNRRHGIYWPTIRAIWYYSFWATNNPYFYALLNFFCHIVPGYLLDTLAVIAG 427

Query: 181 RKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEY 240
           +KP+LM IYKKIDK  D L YF+ ++W +T+  V AL+  LD +DQ++F FD+ Q+ WEY
Sbjct: 428 QKPILMKIYKKIDKVRDILAYFSDKEWTFTNDRVLALWKSLDSQDQDIFNFDINQLSWEY 487

Query: 241 YAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLY 292
           +++A  LGLRVYLV DDIHTLPAARKK+++LYIAH  L++F    +  FLLY
Sbjct: 488 FSQAHCLGLRVYLVKDDIHTLPAARKKWEKLYIAHTGLQVF----VYAFLLY 535

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328720028|ref|XP_001946873.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum]

 Score =  303 bits (776), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 152/294 (51%), Positives = 201/294 (68%), Gaps = 1/294 (0%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           +L + PNTY+FTK+LAED + +E + LP+ V RP V+V TYREPVRGWIDNVYGP G++V
Sbjct: 251 ILGDLPNTYSFTKSLAEDAIRREAQDLPILVFRPTVVVGTYREPVRGWIDNVYGPTGIVV 310

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNP 120
           G  TGVLHT+ ++ N VTD++P  +    +     K+  T+  + D IPIY    S + P
Sbjct: 311 GACTGVLHTYFLDSNFVTDIIPVDIVVN-ALICAAKETATANVKHDEIPIYTCSSSIQKP 369

Query: 121 ISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSG 180
           I W +L EL       WPTIRAIWY SF    N Y Y +L+FF H +PG+ LD+ A LSG
Sbjct: 370 IKWKELMELNKRYGIQWPTIRAIWYSSFWVTKNPYLYAMLNFFCHVVPGYTLDTFARLSG 429

Query: 181 RKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEY 240
           +KP+LM IY KIDK SD L YF  ++W + ++ + AL++ LD  D+ELF FD+ Q+ W+Y
Sbjct: 430 KKPILMNIYNKIDKVSDILAYFTGKEWTFPNNRLLALWDTLDGRDKELFNFDIHQLSWDY 489

Query: 241 YAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIV 294
           + +A  LGLRVYLV DDIHTLPAARKK+++LYIAH  L IF   ++L  L  IV
Sbjct: 490 FCQAYCLGLRVYLVKDDIHTLPAARKKWEKLYIAHNILLIFVYGIVLCCLWLIV 543

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328720032|ref|XP_001949806.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum]

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 150/294 (51%), Positives = 200/294 (68%), Gaps = 1/294 (0%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           +L + PNTY+FTK+LAED + +E + LP+ V RP V+V TYREPVRGWIDNVYGP G++V
Sbjct: 197 ILGDLPNTYSFTKSLAEDAIRREAQDLPILVFRPTVVVGTYREPVRGWIDNVYGPTGIVV 256

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNP 120
           G  TGVLHT+ ++ N VTD++P  +          K+  T+  + D IPIY    S + P
Sbjct: 257 GAGTGVLHTYYLDSNIVTDIIPVDIVVNALICA-AKETATANVKHDEIPIYTCSSSIQKP 315

Query: 121 ISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLSG 180
           I W +  EL       WPTIRAIWY SF    N Y Y +L+FF H +PG+ LD+LA  SG
Sbjct: 316 IKWKEFIELNKRYGMQWPTIRAIWYSSFWVTKNPYLYAMLNFFCHVVPGYTLDTLARFSG 375

Query: 181 RKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEY 240
           +KP+LM IYKKIDK  D L YF+ ++W + ++ + AL++ LD +D+ELF FD+ Q+ W+Y
Sbjct: 376 QKPILMNIYKKIDKVRDILAYFSDKEWTFPNNRLLALWDTLDGQDKELFNFDIHQLSWDY 435

Query: 241 YAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIV 294
           + +A  LGLRVYLV DDIHTLPAARKK+++L IAH  L IF   ++L  L  IV
Sbjct: 436 FCQANCLGLRVYLVKDDIHTLPAARKKWEKLNIAHNILLIFVYGIVLCCLWLIV 489

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326510115|dbj|BAJ87274.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 144/302 (47%), Positives = 191/302 (63%), Gaps = 13/302 (4%)

Query: 5   WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIAT 64
           WPNTYTFTKALAED+   E  GLP  + RP+V++STY EPVRGWIDNVYGPIGM+VG+  
Sbjct: 257 WPNTYTFTKALAEDLAKHESAGLPFGIFRPSVVISTYNEPVRGWIDNVYGPIGMIVGVGA 316

Query: 65  GVLHTHLINLNTVTDMVPSTVSDGP---SEGVWQKKFPTSVFRPDPIPIYNFVGSARNPI 121
           GVLHTH  ++  V D+VP  +       S     K  PT     DP PI+N+V S +NPI
Sbjct: 317 GVLHTHHCDVTKVVDLVPVDLVVNALICSAYKVSKNVPT--IESDP-PIFNYVSSKQNPI 373

Query: 122 SWGKLDELATVCH----PIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLAS 177
           +   L+    +      P WPTI A+WY+SF+P +N Y Y +L    HTIPG+ LD L  
Sbjct: 374 N---LENFFAIIKKHGLPNWPTINAVWYYSFMPTNNPYLYSLLFLLFHTIPGYFLDFLCQ 430

Query: 178 LSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMK 237
           L+GRKPML  IYKK+ KA+  L +FA+ +W + D N  AL+  +   D+  FFFD+ +M 
Sbjct: 431 LTGRKPMLSNIYKKMKKANAALSFFANNEWEFNDSNTSALWKDMSEADKNTFFFDIKEMS 490

Query: 238 WEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQAL 297
           W+YY+ A  +GLR+YLV DDIHT+  AR K+++L  AH  LK    ++LL    +I+   
Sbjct: 491 WDYYSRACAIGLRLYLVKDDIHTIKNARIKWEKLRKAHLLLKTVVAIVLLRICWFIINMC 550

Query: 298 FG 299
           F 
Sbjct: 551 FN 552

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|328720030|ref|XP_001944359.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum]

 Score =  270 bits (691), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 145/302 (48%), Positives = 192/302 (63%), Gaps = 13/302 (4%)

Query: 5   WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIAT 64
           WPNTYTFTKALAED+   E  GLPL + RP+V++STY EPVRGWIDNVYGPIGM+VG+  
Sbjct: 257 WPNTYTFTKALAEDLAKHEAVGLPLGIFRPSVVISTYNEPVRGWIDNVYGPIGMIVGVGA 316

Query: 65  GVLHTHLINLNTVTDMVPSTVSDGP---SEGVWQKKFPTSVFRPDPIPIYNFVGSARNPI 121
           GVLHTH  ++  V D+VP  +       S     K  PT    P   PI+N+V S +NPI
Sbjct: 317 GVLHTHHCDVTKVVDLVPVDLVVNALICSAYKVSKTTPTIESNP---PIFNYVSSKQNPI 373

Query: 122 SWGKLDELATVCH----PIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLAS 177
           S   L+    V      P WPTI A+WY+SF+P +N Y Y +L    HTIPG+ LD L  
Sbjct: 374 S---LENFFAVIKKYGLPNWPTINAVWYYSFMPTNNPYLYSLLFLLFHTIPGYFLDFLCQ 430

Query: 178 LSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMK 237
           ++GRKPML  IYKK+ KA+  L +FA+ QW + D+N   L+ ++   D+++FFFD+ +M 
Sbjct: 431 ITGRKPMLTNIYKKMKKANAALSFFANNQWEFIDNNTSTLWKEMSELDKKIFFFDIKEMS 490

Query: 238 WEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQAL 297
           W+YYA A  +GLR+YLV DDIHT+  AR K+++L  AH  LK    ++ +     IV   
Sbjct: 491 WDYYARACAIGLRLYLVKDDIHTIKNARIKWEKLRKAHLILKTIMAIVFIRICWLIVTMC 550

Query: 298 FG 299
           F 
Sbjct: 551 FN 552

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|298402911|gb|ADI82775.1| fatty-acyl CoA reductase 2 [Ostrinia nubilalis]

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 126/305 (41%), Positives = 191/305 (62%), Gaps = 5/305 (1%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           L+ + PNTY FTKA+AE+ + K G+GLP+ ++RP+++VSTY EPVRGW D+VYGP G++V
Sbjct: 322 LIGKRPNTYCFTKAVAEEAVRKYGEGLPICIVRPSIVVSTYEEPVRGWTDSVYGPTGLVV 381

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVS-DGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
           G  TGVL T  ++LN V DMVP  ++ +      W         +   IPIYNFV  A+N
Sbjct: 382 GTGTGVLRTMYMDLNKVADMVPVDLTVNAILASAWHAAKNFKENQTSDIPIYNFVSGAQN 441

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           PI WGK  EL        PT +A+WY+   P ++ + +   +FFLH +P  ++D+  +++
Sbjct: 442 PIKWGKFIELNRKYGIDKPTTKAVWYYGLNPTNSYFMFLFYNFFLHYLPALMVDAYCAVT 501

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           GR+  ++ +Y K+ K ++ L YF+ R W ++D  V+A++  L   D+ +F F MG M W+
Sbjct: 502 GRRRAMLKLYSKVMKMANILFYFSTRDWRFSDRGVRAMWASLSEADRAVFPFSMGDMSWD 561

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKI--FCGLLLLVFLLY--IVQ 295
              E   +GLRVYL+ DD+ TLP ARKK+ RL+  H  LK+  F  +L L +L+   I+ 
Sbjct: 562 RLCETFLIGLRVYLIKDDLSTLPEARKKWNRLFYLHQLLKVVTFALVLNLAYLVLRPILS 621

Query: 296 ALFGI 300
            +FG+
Sbjct: 622 LVFGL 626

Source: Ostrinia nubilalis

Species: Ostrinia nubilalis

Genus: Ostrinia

Family: Crambidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157114336|ref|XP_001658050.1| hypothetical protein AaeL_AAEL006774 [Aedes aegypti] gi|108877391|gb|EAT41616.1| AAEL006774-PA [Aedes aegypti]

 Score =  248 bits (632), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 124/303 (40%), Positives = 182/303 (60%), Gaps = 6/303 (1%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           LL +WPNTYTFTKA+AEDV+ +  +G+P+ + RP ++++TY+EPV GWIDN YGP G++ 
Sbjct: 230 LLDKWPNTYTFTKAIAEDVVRQNSRGMPIGMFRPGIVIATYQEPVPGWIDNFYGPTGVIA 289

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVS-DGPSEGVWQ--KKFPTSVFRPDP-IPIYNFVGS 116
           G  TGVL T   +   V +MVP  +  +G     W   ++F T +  PDP IP+YNF   
Sbjct: 290 GAGTGVLRTLRADPTKVANMVPVDLCVNGIISAAWDIAERFRTEIM-PDPDIPVYNFCTE 348

Query: 117 ARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLA 176
             N I+WG           ++PT+++IWY  +    NK  +Y+   FLH  P    D +A
Sbjct: 349 RSNCITWGDFTYTTIKFGSMYPTLKSIWYLCYTSNPNKVLHYLSILFLHYAPAIFFDVIA 408

Query: 177 SLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQM 236
              GRKP LM  YKKI +  D +EYF+ RQW +   N+ AL+ KL   DQ++FFFDM Q+
Sbjct: 409 LFIGRKPRLMRTYKKIHRFMDVIEYFSMRQWEFKMDNINALWRKLSRADQKVFFFDMRQI 468

Query: 237 KWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQA 296
            W+++ E    G+R YL++D + T+P A  ++ RLY  H A K+   LL++  L++ +  
Sbjct: 469 NWDFFLEQYFCGIRKYLLNDPMETVPEALVRWNRLYWLHQATKVI-ALLVVYKLVFTIWG 527

Query: 297 LFG 299
            F 
Sbjct: 528 FFS 530

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170067375|ref|XP_001868455.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167863531|gb|EDS26914.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  243 bits (621), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 119/296 (40%), Positives = 180/296 (60%), Gaps = 10/296 (3%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           LL +WPNTYTFTKA+AEDV+ +  +G+P+ + RP ++++TY+EPV GWIDN YGP G++ 
Sbjct: 264 LLDKWPNTYTFTKAIAEDVVRQNSRGMPIGMFRPGIVIATYQEPVPGWIDNFYGPTGVIA 323

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVS-DGPSEGVWQ--KKFPTSVFRPDP-IPIYNFVGS 116
           G  TGVL T   +   V +MVP  +  +G     W   ++F T +  PDP IP+YNF   
Sbjct: 324 GAGTGVLRTLRADPTKVANMVPVDLCVNGMISAAWDIAERFQTEIM-PDPEIPVYNFCTE 382

Query: 117 ARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLA 176
             N I+WG           ++PT++++WY  +    N+  +++   FLH +P    D +A
Sbjct: 383 RSNCITWGDFTYTTIKFGSMYPTVKSVWYLCYRSNPNRIMHFLAILFLHYLPAIFFDVIA 442

Query: 177 SLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQM 236
              GRKP LM  YKKI +    +EYF+ RQW +   N+ AL+ +L   DQ+LFFFDM Q+
Sbjct: 443 LFIGRKPRLMRTYKKIHRFMAVIEYFSMRQWDFKMENMNALWRRLSNADQKLFFFDMRQI 502

Query: 237 KWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLY 292
            W+++ E    G+R YL+ D + T+P A  ++ RLY  H A+K+     L++F++Y
Sbjct: 503 NWDFFLEQYFCGIRQYLLRDPLETVPEALVRWNRLYWLHQAVKV-----LVLFVMY 553

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158300988|ref|XP_320774.4| AGAP011736-PA [Anopheles gambiae str. PEST] gi|157013424|gb|EAA00047.4| AGAP011736-PA [Anopheles gambiae str. PEST]

 Score =  243 bits (620), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 172/283 (60%), Gaps = 5/283 (1%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           LL +WPNTYTFTKA+AEDV+ K  +G+P+ + RP ++++TY+EPV GWIDN YGP G++ 
Sbjct: 228 LLDKWPNTYTFTKAIAEDVVRKNSRGMPVGMFRPGIVIATYQEPVPGWIDNFYGPTGVIA 287

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVS-DGPSEGVWQ--KKFPTSVFRPDP-IPIYNFVGS 116
           G  TGVL T   +   V +MVP  +  +G     W   ++F T +  PDP IPIYNF   
Sbjct: 288 GAGTGVLRTLRADPTKVANMVPVDLCVNGIISSAWDIAERFRTEIL-PDPEIPIYNFCTE 346

Query: 117 ARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLA 176
             N I+WG           ++PT++AIWY  +    N   +Y+   FLH  P  + D +A
Sbjct: 347 PNNCITWGDFTHTTIKFGSMYPTMKAIWYLCYASNPNIVLHYLSIIFLHYAPAVVCDIIA 406

Query: 177 SLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQM 236
            L GRKP L+  YKKI +  D +EYF+ R+W +   N+  L+ KL   DQ+LFFFDM Q+
Sbjct: 407 VLIGRKPRLLRSYKKIHRFMDVIEYFSMREWEFKMDNMNGLWRKLSSADQKLFFFDMRQI 466

Query: 237 KWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALK 279
            W+Y+ E    G+R YL++D + T+P A  ++ RLY  H A K
Sbjct: 467 NWDYFLEQYFCGIRRYLLNDPMETVPQAVVRWNRLYWVHQATK 509

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242006084|ref|XP_002423886.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212507132|gb|EEB11148.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/299 (42%), Positives = 190/299 (63%), Gaps = 5/299 (1%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
            ++ WPNTY+FTK +AED++ KEG+ LP+ + RP +I++TY EP+RGW DN+YGP G++V
Sbjct: 220 FIYPWPNTYSFTKQIAEDIISKEGRELPIGIFRPGIIIATYNEPIRGWTDNIYGPTGVIV 279

Query: 61  GIATGVLHTHLINLNTVTDMVP-STVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
           G+ TGVL    I+  TV +MVP   V +G     W+      +     + IYNFV + RN
Sbjct: 280 GVGTGVLRVINIDKETVANMVPVDFVVNGLIVCAWKTHENFRLNDKKNMMIYNFVSATRN 339

Query: 120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
           PI WG+      +    WPT+ AIWY  F    N+  +  +SFFLHT+P +I D +  + 
Sbjct: 340 PIRWGEFSYWNGIYGQNWPTVLAIWYKEFHLVKNRLLFLFVSFFLHTLPSYIADGVFVMC 399

Query: 180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
           G+KP ++ +YKKI+K S+ + YF+ + W ++D N+Q L+  +  +D+ ++ FD+ +M W+
Sbjct: 400 GKKPKMIKLYKKINKFSEVITYFSTQTWSFSDENIQNLWKSISEKDKIIYPFDIEKMDWD 459

Query: 240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKIFCGLLLLVFLLYIVQALF 298
           Y+A+A  LGLRVYL  DDIHTL   RKK++RL   H  L++    LLLVF  +I   LF
Sbjct: 460 YHAQAHLLGLRVYLTKDDIHTLVDGRKKWKRLKFLHRCLQV----LLLVFFTWITYKLF 514

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	300
FB|FBgn0039620	517	CG1443 [Drosophila melanogaste	0.913	0.529	0.370	2.8e-50
FB|FBgn0034145	625	CG5065 [Drosophila melanogaste	0.92	0.441	0.373	2.6e-47
FB|FBgn0038032	502	CG10096 [Drosophila melanogast	0.933	0.557	0.358	3e-46
FB|FBgn0038450	499	CG17560 [Drosophila melanogast	0.923	0.555	0.330	5.2e-42
RGD|1306647	515	Far1 "fatty acyl CoA reductase	0.886	0.516	0.340	6.6e-42
UNIPROTKB|Q66H50	515	Far1 "Fatty acyl-CoA reductase	0.886	0.516	0.340	6.6e-42
UNIPROTKB|Q0P5J1	515	FAR2 "Fatty acyl-CoA reductase	0.896	0.522	0.348	1.1e-41
FB|FBgn0038449	499	CG17562 [Drosophila melanogast	0.933	0.561	0.346	2.8e-41
UNIPROTKB|G8ENM4	515	FAR1 "Uncharacterized protein"	0.89	0.518	0.341	4.6e-41
UNIPROTKB|A5PJQ0	515	FAR1 "Uncharacterized protein"	0.89	0.518	0.341	5.9e-41

FB|FBgn0039620 CG1443 [Drosophila melanogaster (taxid:7227)]

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 106/286 (37%), Positives = 167/286 (58%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             ++  +PNTYTFTK LAE+V+ +  + LP+ + RP ++++TYREPV GWIDN+YGP G++V
Sbjct:   223 IIKGYPNTYTFTKVLAENVVQQSAQNLPVTIFRPGIVITTYREPVTGWIDNMYGPCGVIV 282

Query:    61 GIATGVLHTHLINLNTVTDMVPSTVS-DGPSEGVW---QKKFPTSVFRPDPIPIYNFVGS 116
             GI +GVL     +++    +VP  +  +      W   + K+ T    P   PIYN+V  
Sbjct:   283 GIGSGVLRVFTGDMDNKAHIVPVDMCVNALLASAWDIARNKYET----P---PIYNYVPD 335

Query:   117 ARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLA 176
             A N ++W +  E         P  ++IWY  F    + + Y+IL F  HT+P  ++D++ 
Sbjct:   336 AENMVTWRRYMEDGFEYGCDIPMRKSIWYPRFTIVPHMWQYHILCFLYHTLPALVMDAIM 395

Query:   177 SLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQM 236
              + G+KP +M IY+KI K S+ L+YF+  ++ + + NV+ L  KLD  D+ LF FDM  +
Sbjct:   396 VIIGKKPRMMKIYRKIHKLSNVLKYFSSNEFRFDNDNVRKLTEKLDDRDKRLFAFDMRDL 455

Query:   237 KWEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAH-CALKIF 281
              W         GLR+Y+V DD   +P + K+Y+RL + H   L +F
Sbjct:   456 DWTNLFRVSLYGLRLYVVKDDPSNIPESIKRYERLKVLHYTTLAVF 501

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)]

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 105/281 (37%), Positives = 156/281 (55%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             L+ + PNTYTFTKALAE +L KE   LP+A++RP+++ ++  EP  GW+DN  GP G++ 
Sbjct:   311 LIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVS 370

Query:    61 GIATGVLHTHLINLNTVTDMVP-STVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
              +A G+  T +   N V DMVP   V +      W+    T+  + + + IYN     RN
Sbjct:   371 ALAKGMFRTMMCEKNYVADMVPVDIVINLMIAAAWR----TATRKSNNLLIYNCCTGQRN 426

Query:   120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
             PI W +  + A       P    +WY +     N+    +     H +P +ILD +A + 
Sbjct:   427 PIIWSEFVKHAMTSVRKHPLEGCLWYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIM 486

Query:   180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
             G+KP ++ +  KI KA + LEYFA RQW + D NV AL + L P+D+E+F FD+  + W+
Sbjct:   487 GKKPFVVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWD 546

Query:   240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAHCALKI 280
              Y E   LG R +L      +LPA+RK+  RLY  H   K+
Sbjct:   547 KYVERYVLGFREFLFKQRPESLPASRKRMLRLYYLHQLTKL 587

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0038032 CG10096 [Drosophila melanogaster (taxid:7227)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 104/290 (35%), Positives = 161/290 (55%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             L+ ++PNTYT+TKAL E V+ KE K LPL++ RP VI+++Y+EP+ GWIDN+YGPI +L 
Sbjct:   198 LMGKYPNTYTYTKALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLY 257

Query:    61 GIATGVLHTHLINLNTVTDMVPSTVS-DGPSEGVWQKKFPTSV-FRPDPIPIYNFVGSAR 118
             G A G+LH  L+NL     +VP     +      W     TS+   P+P PIYNF  +  
Sbjct:   258 GAAFGILHITLLNLKAQAGIVPVDYCVNMVLTCAWNTARDTSIKLSPEP-PIYNFTPNND 316

Query:   119 NPISWGKLDELATVCHPIWPTIRAIWYFSFIPASN-KYTYYILSFFLHTIPGFILDSLAS 177
             N I+WG   + A      +P  + +W   F+  +   + +   + F H +PG+ +D    
Sbjct:   317 NLITWGGFRDKAARLRYTYPLTKMMW-LPFLHCTTIPWLFRFTAIFYHLLPGYAIDLALR 375

Query:   178 LSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMK 237
             L G+KP ++ +Y KI K  D L  F    W +   N + L+ K+  EDQ+L+ F+M  + 
Sbjct:   376 LWGKKPRMIKLYDKIHKNIDILAPFVITSWSFDTVNTRKLWAKMSVEDQKLYDFNMSSVD 435

Query:   238 WE-YYAEAMGLGLRVYLVHDDI--HTLPAARKKYQRLYIAHCALKI-FCG 283
             W+ Y+ +A+  G+R+YL  ++     +   RK Y+R    H  L+   CG
Sbjct:   436 WDDYFLQALA-GVRIYLAKEEPGQEVVERGRKIYKRFEFLHRLLQFTLCG 484

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

FB|FBgn0038450 CG17560 [Drosophila melanogaster (taxid:7227)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 93/281 (33%), Positives = 152/281 (54%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             L+  +PNTYT+TKALAEDV+ +E   LPL++ RPA+I+STY+EP+ GW+DN++GP+ +  
Sbjct:   198 LVGSFPNTYTYTKALAEDVILREAGNLPLSIFRPAIIMSTYKEPLVGWVDNLFGPLALCF 257

Query:    61 GIATGVLHTHLINLNTVTDMVPSTVSDGPSEG-VWQK-KFPTSVFRPDPIPIYNFVGSAR 118
             G A G++    ++ +    +VP+      +    W+  +      +    PIY F  S  
Sbjct:   258 GGARGIMRVTTVDPSAKISLVPADYCVNVALACAWRTAEISVQNGKVTTPPIYAFAPSEN 317

Query:   119 NPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASL 178
             N +S+G   + + +   I P  + +WY   +  S    + + +FFLHT+PG+  D L  L
Sbjct:   318 NLMSYGNFIKSSIIYRDIIPLTKMLWYPFVLCISTTSLFPLAAFFLHTLPGYFFDLLLRL 377

Query:   179 SGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKW 238
              GRKP+L+ +Y+KI K    L  F+   W +   N   L   +  +D+ L+ FDM Q+ W
Sbjct:   378 KGRKPILVDLYRKIHKNIAVLGPFSSTTWNFDMTNTMELREAMSKQDRNLYDFDMAQLDW 437

Query:   239 EYYAEAMGLGLRVYLVHDD--IHTLPAARKKYQRLYIAHCA 277
               Y +A   G+R+Y+  +     ++    K   RL + H A
Sbjct:   438 NDYFKAAMYGMRLYIGKEKPTAESIAKGLKLRMRLKVLHYA 478

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 93/273 (34%), Positives = 148/273 (54%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             L+ + PNTY +TKALAE V+ +EG  L +A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct:   196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query:    61 GIATGVLHTHLINLNTVTDMVPSTVSDGPS-EGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
                 G+L T   + N + D+VP  V    S    W     + V RP  I +YN    + N
Sbjct:   256 AAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWY----SGVNRPRNIMVYNCTTGSTN 311

Query:   120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPA-SNKYTYYILSFFLHTIPGFILDSLASL 178
             P  WG++ +         P +  ++   ++   SN    +      HT+P  +LD    L
Sbjct:   312 PFHWGEVGDYLNHSFKTNP-LNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRL 370

Query:   179 SGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKW 238
             +G+KP +M    ++ KA   LEYF    WVW   NV  L N+L+PED++ F  D+ Q+ W
Sbjct:   371 TGQKPWMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHW 430

Query:   239 EYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRL 271
               Y E   +G + Y++++++  LPAARK   +L
Sbjct:   431 AEYIENYCMGTKKYVLNEEMSGLPAARKHLNKL 463

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=IEA;ISO

GO:0008611 "ether lipid biosynthetic process" evidence=IEA;ISO

GO:0010025 "wax biosynthetic process" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA;ISO

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA;ISO

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA;ISO

UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 93/273 (34%), Positives = 148/273 (54%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             L+ + PNTY +TKALAE V+ +EG  L +A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct:   196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query:    61 GIATGVLHTHLINLNTVTDMVPSTVSDGPS-EGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
                 G+L T   + N + D+VP  V    S    W     + V RP  I +YN    + N
Sbjct:   256 AAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWY----SGVNRPRNIMVYNCTTGSTN 311

Query:   120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPA-SNKYTYYILSFFLHTIPGFILDSLASL 178
             P  WG++ +         P +  ++   ++   SN    +      HT+P  +LD    L
Sbjct:   312 PFHWGEVGDYLNHSFKTNP-LNQVFRHPYVKFYSNNLMLHYWKGVKHTVPALLLDLALRL 370

Query:   179 SGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKW 238
             +G+KP +M    ++ KA   LEYF    WVW   NV  L N+L+PED++ F  D+ Q+ W
Sbjct:   371 TGQKPWMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKTFNIDVRQLHW 430

Query:   239 EYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRL 271
               Y E   +G + Y++++++  LPAARK   +L
Sbjct:   431 AEYIENYCMGTKKYVLNEEMSGLPAARKHLNKL 463

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

UNIPROTKB|Q0P5J1 FAR2 "Fatty acyl-CoA reductase 2" [Bos taurus (taxid:9913)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 97/278 (34%), Positives = 153/278 (55%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             L+ +WPNTYT+TKAL E V+ +EG  L +A++RP+++ +T++EP  GW+DN+ GP G+++
Sbjct:   196 LIGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLII 255

Query:    61 GIATGVLHTHLINLNTVTDMVPS-TVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
                 G L +       V D++P+ TV +      W     T+V RP    +Y+      N
Sbjct:   256 AAGKGFLRSIRATPMAVADLIPADTVVNLTLAVGWY----TAVHRPKSTLVYHCTSGNLN 311

Query:   120 PISWGK--LDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLAS 177
             P +WGK  L  LAT    I P  RA    +    +N  T +  +   H  P  I D    
Sbjct:   312 PCNWGKMGLQVLATF-EKI-PFERAFRRPNADFTTNNITTHYWNAVSHRAPAIIYDFYLR 369

Query:   178 LSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMK 237
             L+GRKP +  +  ++ +    LEYF +R W W+ +N + L ++L PEDQ +F FD+ Q+ 
Sbjct:   370 LTGRKPRMTKLMNRLLRTLSMLEYFVNRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLN 429

Query:   238 WEYYAEAMGLGLRVYLVHDDIHTLPAARKKYQRLYIAH 275
             W  Y E   LG++ YL+ +D+  +P A++  +RL   H
Sbjct:   430 WLEYIENYVLGVKKYLLKEDMAGIPEAKQHLKRLRNIH 467

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0038449 CG17562 [Drosophila melanogaster (taxid:7227)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 100/289 (34%), Positives = 155/289 (53%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             LL  +PNTYT+TKALAEDV+ KE  GLPL + RPAVI++ ++EP+ GWIDN+YGP+ +L 
Sbjct:   198 LLGSFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMYGPMAILF 257

Query:    61 GIATGVLHTHLINLNTVTDMVPSTVSDGPSEG-VWQKKFPTSVFRPDPIP-IYNFVGSAR 118
             G+A GVL    I+ +    +VP       +    W+     +       P IY      +
Sbjct:   258 GVARGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIVEGNEMGTQETPLIYQLAPIEQ 317

Query:   119 NPISWGKLDELATVCHPIWPTIRAIWYFSFIPASN-KYTYYILSFFLHTIPGFILDSLAS 177
             N I+ G+    A       P  + IWY  FI      + + + +FF HT+P +  D    
Sbjct:   318 NKITHGEFIRHALDGRTNCPLTKMIWY-PFIHCITVPWLFPLAAFFYHTLPAYFFDLALW 376

Query:   178 LSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMK 237
             LSGRKP L+ +Y+KI K    L  FA + W +   N   L  ++  ED+ +++FDM  + 
Sbjct:   377 LSGRKPRLVKVYQKIHKTLGILGPFACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLN 436

Query:   238 W-EYYAEAMGLGLRVYLVHD--DIHTLPAARKKYQRLYIAHCALK-IFC 282
             W EY+ +A+  G+R +L ++     ++   +K  +RL + H  L+ + C
Sbjct:   437 WKEYFVQALR-GMRQFLGNEAPTPESIAQGKKLIKRLKLLHHILQGVLC 484

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|G8ENM4 FAR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 93/272 (34%), Positives = 145/272 (53%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             L+ + PNTY +TKALAE V+ +EG  L +A++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct:   196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query:    61 GIATGVLHTHLINLNTVTDMVPSTVSDGPS-EGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
                 G+L T   + N + D+VP  V    S    W     + V RP  I +YN    + N
Sbjct:   256 AAGKGILRTMRASNNALADLVPVDVVVNTSLAAAWY----SGVNRPRNIMVYNCTTGSTN 311

Query:   120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
             P  WG+++          P  +A    +    SN   Y+      H  P F+ D    ++
Sbjct:   312 PFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMT 371

Query:   180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
             GR P +M    ++ KA   LEYF    WVW+  NV  L N+L+PED++ F  D+ Q+ W 
Sbjct:   372 GRSPRMMKTITRLHKAMVLLEYFTSNSWVWSTDNVNMLMNQLNPEDKKTFNIDVRQLHWA 431

Query:   240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRL 271
              Y E   +G + Y++++++  LPAARK   +L
Sbjct:   432 EYIENYCMGTKKYVLNEEMSGLPAARKHLNKL 463

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 93/272 (34%), Positives = 144/272 (52%)

Query:     1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
             L+ + PNTY +TKALAE V+ +EG  L + ++RP+++ ++++EP  GWIDN  GP G+ +
Sbjct:   196 LIGDRPNTYIYTKALAEYVVQQEGAKLNVVIVRPSIVGASWKEPFPGWIDNFNGPSGLFI 255

Query:    61 GIATGVLHTHLINLNTVTDMVPSTVSDGPS-EGVWQKKFPTSVFRPDPIPIYNFVGSARN 119
                 G+L T   + N + D+VP  V    S    W     + V RP  I +YN    + N
Sbjct:   256 AAGKGILRTMRASNNALADLVPVDVVVNMSLAAAWY----SGVNRPRNIMVYNCTTGSTN 311

Query:   120 PISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILDSLASLS 179
             P  WG+++          P  +A    +    SN   YY      H  P F+ D    ++
Sbjct:   312 PFHWGEVEYHVISTFKRNPLEQAFRRPNVNLTSNHLLYYYWIAVSHKAPAFLYDIYLRMT 371

Query:   180 GRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWE 239
             GR P +M    ++ KA   LEYF    WVW+  NV  L N+L+PED++ F  D+ Q+ W 
Sbjct:   372 GRSPRMMKTITRLHKAMVFLEYFTSNSWVWSTDNVNMLMNQLNPEDKKTFNIDVRQLHWA 431

Query:   240 YYAEAMGLGLRVYLVHDDIHTLPAARKKYQRL 271
              Y E   +G + Y++++++  LPAARK   +L
Sbjct:   432 EYIENYCMGTKKYVLNEEMSGLPAARKHLNKL 463

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	300
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	3e-34
cd09071	92	cd09071, FAR_C, C-terminal domain of fatty acyl Co	5e-33
pfam03015	94	pfam03015, Sterile, Male sterility protein	4e-25
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	2e-21
PLN02996	491	PLN02996, PLN02996, fatty acyl-CoA reductase	3e-19
PLN02503	605	PLN02503, PLN02503, fatty acyl-CoA reductase 2	6e-14

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score =  126 bits (319), Expect = 3e-34
 Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 3/133 (2%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV 60
           LL   PNTYTFTKALAE ++ KE   LPL ++RP+++ +T +EP  GWIDN  GP G+ +
Sbjct: 186 LLGGHPNTYTFTKALAERLVLKERGNLPLVIVRPSIVGATLKEPFPGWIDNFNGPDGLFL 245

Query: 61  GIATGVLHTHLINLNTVTDMVPSTVSDGPSEGVWQKKFPTSVFRPDPIPIYNFVGSARNP 120
               G+L T   + N V D++P    D  +  +      + V +P  + +Y+   S  NP
Sbjct: 246 AYGKGILRTMNADPNAVADIIP---VDVVANALLAAAAYSGVRKPRELEVYHCGSSDVNP 302

Query: 121 ISWGKLDELATVC 133
            +WG+ +EL    
Sbjct: 303 FTWGEAEELINQY 315

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases

 Score =  116 bits (293), Expect = 5e-33
 Identities = 42/91 (46%), Positives = 58/91 (63%)

Query: 163 FLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLD 222
           FLH +P ++LD L  L GRKP L+ +Y+KI K  D LEYF   +W + + N +AL+ +L 
Sbjct: 1   FLHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLS 60

Query: 223 PEDQELFFFDMGQMKWEYYAEAMGLGLRVYL 253
            ED+ELF FD+  + W+ Y E    GLR YL
Sbjct: 61  EEDRELFNFDIRSIDWDDYFENYIPGLRKYL 91

C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92

>gnl|CDD|111859 pfam03015, Sterile, Male sterility protein

 Score = 96.2 bits (240), Expect = 4e-25
 Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 2/95 (2%)

Query: 163 FLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLD 222
           F HT+P + LD L  L G+KP L+ +Y+KI K  + L+ F+  +W++ + N + L  K+ 
Sbjct: 1   FYHTLPAYFLDLLLRLYGQKPRLVKLYRKIHKGLEVLQPFSLNEWIFDNKNTRELREKMS 60

Query: 223 PEDQELFFFDMGQMKW-EYYAEAMGLGLRVYLVHD 256
            ED++LF FDM  + W EY+  A+  G+R YL+ +
Sbjct: 61  EEDKKLFNFDMESLDWDEYFRNAI-RGIRKYLLKE 94

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 1   LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVY-GPIGML 59
           LL   PN YT +K LAE ++ +   GLP+ + RP++I     E   GWI+    GP G+L
Sbjct: 158 LLGGLPNGYTQSKWLAEQLVREAAGGLPVVIYRPSIITG---ESRTGWINGDDFGPRGLL 214

Query: 60  VGIATGVLHTHLINLNTVTDMVP 82
            G   GVL   L + +   D+VP
Sbjct: 215 GGAGLGVLPDILGDPDARLDLVP 237

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase

 Score = 87.1 bits (216), Expect = 3e-19
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 32/143 (22%)

Query: 2   LHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG 61
           LH WPNTY FTKA+ E +L    + LPL ++RP +I STY+EP  GWI+ +     ++VG
Sbjct: 229 LHGWPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVG 288

Query: 62  IATGVLHTHLINLNTVTDMVPSTV-------------SDGPSEGVWQKKFPTSVFRPDPI 108
              G L   L + N+V D++P+ +                 SE ++              
Sbjct: 289 YGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYH------------- 335

Query: 109 PIYNFVGSA-RNPISWGKLDELA 130
                VGS+ +NP+ +  L + A
Sbjct: 336 -----VGSSLKNPVKFSNLHDFA 353

Length = 491

>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2

 Score = 71.4 bits (175), Expect = 6e-14
 Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 29/257 (11%)

Query: 2   LHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDN--VYGPIGML 59
           L+ W +TY FTKA+ E V+      +P+ ++RP+VI ST+++P  GW++   +  PI + 
Sbjct: 343 LYGWQDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLY 402

Query: 60  VGIATGVLHTHLINLNTVTDMVP------STVSDGPSEGVWQKKFPTSVFRPDPIPIYNF 113
            G   G L   L + N V D+VP      +T++     G   K        P+ I +Y  
Sbjct: 403 YG--KGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAK--------PE-INVYQI 451

Query: 114 VGSARNPISWGKLDELATVCHPIWPTIRAIWYFSFIPASNKYTYYILSFFLHTIPGFILD 173
             S  NP+ +  L  L    +   P + +      +P   K    +  F  H     +L 
Sbjct: 452 ASSVVNPLVFQDLARLLYEHYKSSPYMDSKGRPIHVP-PMKLFSSMEDFSSHLWRDALLR 510

Query: 174 S-LASLSGRKPMLMAIYKKIDKAS-DTLEYFAHRQWVWT-------DHNVQALFNKLDPE 224
           S LA +S     L    + I   S +  +Y A     +T       + N Q L  ++  E
Sbjct: 511 SGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEE 570

Query: 225 DQELFFFDMGQMKWEYY 241
           ++  F FD+G + W  Y
Sbjct: 571 EKAEFGFDVGSIDWRDY 587

Length = 605

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	300
KOG1221|consensus	467		100.0
PLN02503	605	fatty acyl-CoA reductase 2	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PF03015	94	Sterile: Male sterility protein; InterPro: IPR0042	99.97
cd09071	92	FAR_C C-terminal domain of fatty acyl CoA reductas	99.94
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.55
PRK07201	657	short chain dehydrogenase; Provisional	99.25
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.93
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.86
KOG1430|consensus	361		98.8
PLN02427	386	UDP-apiose/xylose synthase	98.7
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.67
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.63
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.63
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.58
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.55
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.51
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.49
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.48
PLN02260	668	probable rhamnose biosynthetic enzyme	98.46
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.45
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.44
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.42
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.39
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.38
PLN02206	442	UDP-glucuronate decarboxylase	98.37
PLN02214	342	cinnamoyl-CoA reductase	98.35
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.33
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.31
PLN02572	442	UDP-sulfoquinovose synthase	98.3
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.24
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.19
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	98.17
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.16
PLN00198	338	anthocyanidin reductase; Provisional	98.12
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.08
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.06
PLN02240	352	UDP-glucose 4-epimerase	98.03
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.03
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.02
PLN02650	351	dihydroflavonol-4-reductase	97.99
KOG0747|consensus	331		97.98
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	97.98
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	97.97
PLN02583	297	cinnamoyl-CoA reductase	97.95
PRK10675	338	UDP-galactose-4-epimerase; Provisional	97.93
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	97.93
PLN00016	378	RNA-binding protein; Provisional	97.93
PLN02686	367	cinnamoyl-CoA reductase	97.91
CHL00194	317	ycf39 Ycf39; Provisional	97.83
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.8
PLN02896	353	cinnamyl-alcohol dehydrogenase	97.74
PLN02653	340	GDP-mannose 4,6-dehydratase	97.61
KOG1502|consensus	327		97.61
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.57
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	97.55
PLN02778	298	3,5-epimerase/4-reductase	97.38
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	97.38
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	97.33
PRK05865	854	hypothetical protein; Provisional	97.1
KOG2865|consensus	391		96.56
PTZ00374	1108	dihydroxyacetone phosphate acyltransferase; Provis	96.43
PLN02260	668	probable rhamnose biosynthetic enzyme	95.91
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.02
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.71
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	94.55
PRK12320	699	hypothetical protein; Provisional	94.07
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	93.17
KOG1371|consensus	343		93.1
PRK09135	249	pteridine reductase; Provisional	93.03
KOG1429|consensus	350		92.54
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	92.19
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	91.85
KOG4288|consensus	283		91.7
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	91.3
PRK06482	276	short chain dehydrogenase; Provisional	91.05
PRK12829	264	short chain dehydrogenase; Provisional	86.29
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	86.02
PRK05875	276	short chain dehydrogenase; Provisional	84.94
PRK06914	280	short chain dehydrogenase; Provisional	84.79
PRK12746	254	short chain dehydrogenase; Provisional	81.09
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	80.79
PRK07067	257	sorbitol dehydrogenase; Provisional	80.1
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	80.04

>KOG1221|consensus

Probab=100.00  E-value=2.6e-76  Score=563.96  Aligned_cols=266  Identities=41%  Similarity=0.764  Sum_probs=257.5

Q ss_pred             CCCCCCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027           1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM   80 (300)
Q Consensus         1 ll~~~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di   80 (300)
                      ++++|||||||||++||++|.+++++||++|+|||||+++++||+|||+||++||+|++.++|+|++|.+.+|+++++|+
T Consensus       200 l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adi  279 (467)
T KOG1221|consen  200 LLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADI  279 (467)
T ss_pred             hcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccce
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcccccccceeeeecchHHHH
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIRAIWYFSFIPASNKYTYY  158 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P~~~~~~~~~~~~  158 (300)
                      ||||+||| +|+++|+++.+.+  +++ .+|||++||..||+||+++.+. .++.. ++|+++.+|+|.+.+++|.+.|.
T Consensus       280 IPvD~vvN~~ia~~~~~~~~~~--~~~-~~IY~~tss~~Np~t~~~~~e~~~~~~~-~~Pl~~~iw~P~~~~~sn~~~f~  355 (467)
T KOG1221|consen  280 IPVDMVVNAMIASAWQHAGNSK--EKT-PPIYHLTSSNDNPVTWGDFIELALRYFE-KIPLEKMIWYPFGTLTSNPWLFN  355 (467)
T ss_pred             eeHHHHHHHHHHHHHHHhccCC--CCC-CcEEEecccccCcccHHHHHHHHHHhcc-cCCcccceeccCceeeecHhHHH
Confidence            99999999 9999998876433  134 7899999999999999999999 99999 99999999999999999999999


Q ss_pred             HHHHHHhhhhHHHHHHHHHhcCCChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCCH
Q psy3027         159 ILSFFLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKW  238 (300)
Q Consensus       159 i~~~~~~~lPa~~~D~~~~l~G~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW  238 (300)
                      +..+++|++||+++|+++++.|+||.+.|+++|+.+..++++||+.++|+||++|+.+|++.|+++||+.|+||++++||
T Consensus       356 ~~~~~~h~lPa~~~d~~~~i~g~k~~~~k~~~ki~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d~~~f~fd~~~ldW  435 (467)
T KOG1221|consen  356 LAAFLYHTLPAYILDLLLRLLGKKPRLVKLYRKIHKLVKLLEPFSLFKWIFDNKNTEKLREKMSEEDKRLFNFDMKQLDW  435 (467)
T ss_pred             HHHHHHHHhhHHHHHHHHHHhCCChhhhHHHHHHHHHHHhhhhheeceEEecCccHHHHHHhCCHHHHhhcCCCcccCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcCCCCCChHHHHHHHHH
Q psy3027         239 EYYAEAMGLGLRVYLVHDDIHTLPAARKKYQR  270 (300)
Q Consensus       239 ~~Y~~~~~~Girkyllke~~~~~~~a~~~~~~  270 (300)
                      ++|+.+|+.|+|+|++||+++++|+||++++|
T Consensus       436 ~ey~~~~i~G~r~~llKe~~e~l~~~r~~~kr  467 (467)
T KOG1221|consen  436 EEYFNRHLLGLRKYLLKESPESLPQARKRLKR  467 (467)
T ss_pred             HHHHHHHHHHHHHHHhcCChhhhHHHHHhhcC
Confidence            99999999999999999999999999999874

>PLN02503 fatty acyl-CoA reductase 2

Probab=100.00  E-value=1e-59  Score=468.12  Aligned_cols=247  Identities=23%  Similarity=0.351  Sum_probs=220.4

Q ss_pred             CCCCCCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027           1 LLHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM   80 (300)
Q Consensus         1 ll~~~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di   80 (300)
                      ++++||||||+||++||++|.++.++||++|+|||||+++++||+|||+||.++..+.+..+|+|+++.++++++..+|+
T Consensus       342 ~~~~~pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~Di  421 (605)
T PLN02503        342 KLYGWQDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDV  421 (605)
T ss_pred             hhCCCCChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeE
Confidence            46899999999999999999999999999999999999999999999999955544555556899999999999999999


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcccccccceeeeecchHHHH
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIRAIWYFSFIPASNKYTYY  158 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P~~~~~~~~~~~~  158 (300)
                      ||||+||| +|+|++.......   .+ ++|||||++..||+||+++.+. .+++. ++|+.+..|+|. ..+.+++.+.
T Consensus       422 VPVD~vvna~i~a~a~~~~~~~---~~-~~vYn~ts~~~nP~t~~~~~~~~~~~~~-~~P~~~~~~~~~-~~~~~~~~~~  495 (605)
T PLN02503        422 VPADMVVNATLAAMAKHGGAAK---PE-INVYQIASSVVNPLVFQDLARLLYEHYK-SSPYMDSKGRPI-HVPPMKLFSS  495 (605)
T ss_pred             EeecHHHHHHHHHHHhhhcccC---CC-CCEEEeCCCCCCCeEHHHHHHHHHHHHh-hCCcccccCcce-eccCceehhh
Confidence            99999999 8888554332111   34 7899999999999999999999 99999 999999999997 5688999999


Q ss_pred             HHHHHHhhhhHHHHHHHHHhc-----CCChHHHHHHHHH--------HhHHhhhhchhcceEEEechhHHHHHhcCCccc
Q psy3027         159 ILSFFLHTIPGFILDSLASLS-----GRKPMLMAIYKKI--------DKASDTLEYFAHRQWVWTDHNVQALFNKLDPED  225 (300)
Q Consensus       159 i~~~~~~~lPa~~~D~~~~l~-----G~kp~l~k~~~k~--------~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D  225 (300)
                      +..++.|+    +.|.++++.     |++|++.+.++|+        .+..++++||++++|+|+++|+++|++.|+++|
T Consensus       496 ~~~~~~h~----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~D  571 (605)
T PLN02503        496 MEDFSSHL----WRDALLRSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEE  571 (605)
T ss_pred             HHHHHHHH----HHHHHHHHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHH
Confidence            99999885    688887764     4788888877644        448999999999999999999999999999999


Q ss_pred             cccccccCCCCCHHHHHHH-HHHHHHHHHcCCC
Q psy3027         226 QELFFFDMGQMKWEYYAEA-MGLGLRVYLVHDD  257 (300)
Q Consensus       226 ~~~F~fD~~~idW~~Y~~~-~~~Girkyllke~  257 (300)
                      |+.|+||++++||++|+++ |++|+|||++|+.
T Consensus       572 r~~F~~D~~~idW~~Y~~~~~i~G~rky~lk~~  604 (605)
T PLN02503        572 KAEFGFDVGSIDWRDYITNVHIPGLRRHVMKGR  604 (605)
T ss_pred             hhccCCCcCCCCHHHHHHHhhhhHHHHHHhccC
Confidence            9999999999999999997 9999999999984

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=1.2e-55  Score=433.58  Aligned_cols=248  Identities=25%  Similarity=0.371  Sum_probs=231.7

Q ss_pred             CCCCCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027           2 LHEWPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         2 l~~~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV   81 (300)
                      +++|||||++||++||+++.++.+++|++|+||++|+|+.++|+|||+|+++++.+++.++++|.++.++++++...|+|
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v  308 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVI  308 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeeccee
Confidence            57899999999999999999988899999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcc----cccccceeeeecchH
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTI----RAIWYFSFIPASNKY  155 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~----~~l~~P~~~~~~~~~  155 (300)
                      |||+||| +++++++... ..   .. .+|||++|+..||+||+|+.+. .++++ ++|+.    +.+|+|.++++++.+
T Consensus       309 ~Vddvv~a~l~a~~~~~~-~~---~~-~~vYNi~s~~~~~~s~~ei~~~~~~~~~-~~p~~~~~~~~~~~p~~~~~~~~~  382 (491)
T PLN02996        309 PADMVVNAMIVAMAAHAG-GQ---GS-EIIYHVGSSLKNPVKFSNLHDFAYRYFS-KNPWINKEGSPVKVGKGTILSTMA  382 (491)
T ss_pred             cccHHHHHHHHHHHHhhc-cC---CC-CcEEEecCCCCCcccHHHHHHHHHHHhh-hCCCcCCCCCeEeeCCceecCcHH
Confidence            9999999 9998876421 01   23 5799999999999999999999 99999 99998    599999999999999


Q ss_pred             HHHHHHHHHhhhhHHHHHHHHH--hcCCChHHHHHHHHH---HhHHhhhhchhcceEEEechhHHHHHhcCCccc---cc
Q psy3027         156 TYYILSFFLHTIPGFILDSLAS--LSGRKPMLMAIYKKI---DKASDTLEYFAHRQWVWTDHNVQALFNKLDPED---QE  227 (300)
Q Consensus       156 ~~~i~~~~~~~lPa~~~D~~~~--l~G~kp~l~k~~~k~---~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D---~~  227 (300)
                      .|.+..++.|.+|++++|++..  +.|+||++.|+++|+   ++.+++++||++++|+|+++|+++|++.|+++|   |+
T Consensus       383 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~  462 (491)
T PLN02996        383 SFSLYMTIRYLLPLKALQLVNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEAD  462 (491)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCcccccccc
Confidence            9999999999999999999988  678999999999999   666999999999999999999999999999955   99


Q ss_pred             cccccCCCCCHHHHHHH-HHHHHHHHHcC
Q psy3027         228 LFFFDMGQMKWEYYAEA-MGLGLRVYLVH  255 (300)
Q Consensus       228 ~F~fD~~~idW~~Y~~~-~~~Girkyllk  255 (300)
                      .|+||++++||++|+++ |++|+|||++|
T Consensus       463 ~f~~d~~~~~w~~y~~~~~~~g~~~y~~k  491 (491)
T PLN02996        463 MFDFDPKSIDWEDYMTNVHIPGLVKYVLK  491 (491)
T ss_pred             EeccCcccCCHHHHHHHhhHHHHHHHhcC
Confidence            99999999999999999 99999999987

>PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms

Probab=99.97  E-value=9.9e-31  Score=202.17  Aligned_cols=94  Identities=38%  Similarity=0.852  Sum_probs=92.3

Q ss_pred             HHhhhhHHHHHHHHHhcCCChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCCHHHHH
Q psy3027         163 FLHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYA  242 (300)
Q Consensus       163 ~~~~lPa~~~D~~~~l~G~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~  242 (300)
                      ++|++||+++|+++++.|+||++.|+++|++++.++++||++++|+|+++|+.+|++.|+++||+.|+||+++|||++|+
T Consensus         1 ~~h~lPA~~~D~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~   80 (94)
T PF03015_consen    1 LFHFLPAYLLDLILRLFGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEYF   80 (94)
T ss_pred             CcchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHHH
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCC
Q psy3027         243 EAMGLGLRVYLVHD  256 (300)
Q Consensus       243 ~~~~~Girkyllke  256 (300)
                      .+|+.|+|||++||
T Consensus        81 ~~~~~G~rkyllke   94 (94)
T PF03015_consen   81 RNYIPGIRKYLLKE   94 (94)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999998

The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process

>cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases

Probab=99.94  E-value=5.4e-27  Score=180.35  Aligned_cols=91  Identities=45%  Similarity=0.865  Sum_probs=89.1

Q ss_pred             HhhhhHHHHHHHHHhcCCChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCCHHHHHH
Q psy3027         164 LHTIPGFILDSLASLSGRKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMKWEYYAE  243 (300)
Q Consensus       164 ~~~lPa~~~D~~~~l~G~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~~  243 (300)
                      .|.+||.++|.++.+.|++|++.++++|+.+.+++++||++++|+|+++|+++|++.|+++||+.|+||+++|||++|++
T Consensus         2 ~~~lpa~~~d~~~~l~g~~~~~~~~~~k~~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~~idW~~Y~~   81 (92)
T cd09071           2 LHLLPAYLLDLLLRLLGRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDYFE   81 (92)
T ss_pred             cccchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCCCCCHHHHHH
Confidence            58899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHc
Q psy3027         244 AMGLGLRVYLV  254 (300)
Q Consensus       244 ~~~~Girkyll  254 (300)
                      ++++|+|+|++
T Consensus        82 ~~~~G~r~yll   92 (92)
T cd09071          82 NYIPGLRKYLL   92 (92)
T ss_pred             HHHHHHHHHhC
Confidence            99999999975

C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.55  E-value=2.9e-15  Score=135.06  Aligned_cols=83  Identities=28%  Similarity=0.447  Sum_probs=60.1

Q ss_pred             CCCCcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCC-ChHHHHHHHhhcceeeeccCCCcccc
Q psy3027           3 HEWPNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVY-GPIGMLVGIATGVLHTHLINLNTVTD   79 (300)
Q Consensus         3 ~~~pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~-g~~~~~~~~~~G~l~~~~~~~~~~~d   79 (300)
                      .+++|+|+.||++||++++++.  .++|++|+|||+|+|   +|.+||.++.. ++..+.....+|.++..+++++..+|
T Consensus       162 ~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g---~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d  238 (249)
T PF07993_consen  162 QGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG---DSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLD  238 (249)
T ss_dssp             TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE----SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--
T ss_pred             ccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc---cCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEe
Confidence            4789999999999999999985  489999999999999   56689999998 77778888889999989888888999


Q ss_pred             eeccccccc
Q psy3027          80 MVPSTVSDG   88 (300)
Q Consensus        80 iVPVD~vvn   88 (300)
                      +||||+||+
T Consensus       239 ~vPVD~va~  247 (249)
T PF07993_consen  239 LVPVDYVAR  247 (249)
T ss_dssp             EEEHHHHHH
T ss_pred             EECHHHHHh
Confidence            999999998

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1.5e-10  Score=117.79  Aligned_cols=116  Identities=26%  Similarity=0.332  Sum_probs=82.3

Q ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhh-cce---eeeccCCCcccce
Q psy3027           5 WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIAT-GVL---HTHLINLNTVTDM   80 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~-G~l---~~~~~~~~~~~di   80 (300)
                      .+|.|..||+.+|+++.+. .++|++|+||+.|+|..+   .|..+++.++..++..+.. +..   ....+..+...++
T Consensus       147 ~~~~Y~~sK~~~E~~~~~~-~g~~~~ilRp~~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (657)
T PRK07201        147 LPTPYHRTKFEAEKLVREE-CGLPWRVYRPAVVVGDSR---TGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNI  222 (657)
T ss_pred             CCCchHHHHHHHHHHHHHc-CCCcEEEEcCCeeeecCC---CCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeee
Confidence            4588999999999999864 589999999999999765   4555666654433222111 111   1133445567899


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||||+|++ ++.++.. .   .   .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       223 v~vddva~ai~~~~~~-~---~---~~-g~~~ni~~~--~~~s~~el~~~i~~~~g  268 (657)
T PRK07201        223 VPVDYVADALDHLMHK-D---G---RD-GQTFHLTDP--KPQRVGDIYNAFARAAG  268 (657)
T ss_pred             eeHHHHHHHHHHHhcC-c---C---CC-CCEEEeCCC--CCCcHHHHHHHHHHHhC
Confidence            99999999 6655421 1   1   23 579999987  78999999999 87766

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.93  E-value=4e-09  Score=97.03  Aligned_cols=118  Identities=17%  Similarity=0.101  Sum_probs=85.6

Q ss_pred             CCcHHHHHHHHHHHHHHHhcC-------CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcc
Q psy3027           5 WPNTYTFTKALAEDVLCKEGK-------GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTV   77 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~~-------~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~   77 (300)
                      +.+.|..||++||++|.+..+       +|-.+++||+.|+|..+..+       .  ..+......|......++++..
T Consensus       142 ~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~-------~--~~~~~~~~~g~~~~~~g~~~~~  212 (280)
T PF01073_consen  142 PLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRL-------V--PRLVKMVRSGLFLFQIGDGNNL  212 (280)
T ss_pred             ccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccc-------c--chhhHHHHhcccceeecCCCce
Confidence            667999999999999998743       59999999999999655211       1  1223334456555677788889


Q ss_pred             cceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCccc-HhHHHHH-HHHcC
Q psy3027          78 TDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPIS-WGKLDEL-ATVCH  134 (300)
Q Consensus        78 ~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t-~~~~~~~-~~~~~  134 (300)
                      .|++.|+.||. .+.|+.+........... +++|+++++  .|++ +.|+... .+.++
T Consensus       213 ~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~-G~~y~itd~--~p~~~~~~f~~~~~~~~G  269 (280)
T PF01073_consen  213 FDFVYVENVAHAHVLAAQALLEPGKPERVA-GQAYFITDG--EPVPSFWDFMRPLWEALG  269 (280)
T ss_pred             ECcEeHHHHHHHHHHHHHHhccccccccCC-CcEEEEECC--CccCcHHHHHHHHHHHCC
Confidence            99999999999 877765433320000134 789999998  8888 8899877 66655

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.86  E-value=3.2e-09  Score=99.65  Aligned_cols=120  Identities=16%  Similarity=0.197  Sum_probs=79.8

Q ss_pred             CCCCcHHHHHHHHHHHHHHHh-cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHh-hcceeeeccCCCcccce
Q psy3027           3 HEWPNTYTFTKALAEDVLCKE-GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIA-TGVLHTHLINLNTVTDM   80 (300)
Q Consensus         3 ~~~pNtYt~TK~~aE~lv~~~-~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~-~G~l~~~~~~~~~~~di   80 (300)
                      +++++.|+.||+.||.||+++ ..|||++|+||+.|+|+++   .|-.+.-...+-++.++. .|+.   | +.+.-.|+
T Consensus       162 ~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~lg~~---P-~~~~~~~~  234 (382)
T COG3320         162 QGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQLGIA---P-DSEYSLDM  234 (382)
T ss_pred             CccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc---cCccccchHHHHHHHHHHHhCCC---C-Ccccchhh
Confidence            468899999999999999999 3499999999999999998   564443333343333322 3433   2 45677899


Q ss_pred             eccccccc-cccccccccCCCC----CCCCCCCcEEEeeCCCCCcccHhHHHHH-HH
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTS----VFRPDPIPIYNFVGSARNPISWGKLDEL-AT  131 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~----~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~  131 (300)
                      +|||.|+. +.+.+-..+.+..    .++.. -..|| .++..+.+...++.+. .+
T Consensus       235 ~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~-f~~~~-~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         235 LPVDHVARAVVAPSVQVAEAIAALGAHSDIR-FNQLH-MLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             CccceeeEEeehhhhhHHHHHHHhccCccch-hhhee-cccCCCccchhHHHHhHhh
Confidence            99999999 6555443321000    00011 13455 4455688999999888 54

>KOG1430|consensus

Probab=98.80  E-value=7.3e-08  Score=91.02  Aligned_cols=190  Identities=13%  Similarity=0.069  Sum_probs=119.7

Q ss_pred             CCCcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027           4 EWPNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         4 ~~pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV   81 (300)
                      .|++.|+.||++||++|.++.  ++|-.+.+||++|+|.-+.         .-...+....-.|......++.+..-|.+
T Consensus       148 ~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~---------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~  218 (361)
T KOG1430|consen  148 KHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDK---------RLLPKIVEALKNGGFLFKIGDGENLNDFT  218 (361)
T ss_pred             ccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCc---------cccHHHHHHHHccCceEEeeccccccceE
Confidence            577899999999999999985  4799999999999985541         11234556667787777888889999999


Q ss_pred             ccccccc-ccccccccc-CCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcccccccceeeeecchHHHH
Q psy3027          82 PSTVSDG-PSEGVWQKK-FPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIRAIWYFSFIPASNKYTYY  158 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~-~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P~~~~~~~~~~~~  158 (300)
                      +++-|+- .+.|+.... ....   .. +++|+++++  +|+..-++... .+.++...|.  ....|-.       +  
T Consensus       219 ~~~Nva~ahilA~~aL~~~~~~---~~-Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~~~~--~~~~p~~-------l--  281 (361)
T KOG1430|consen  219 YGENVAWAHILAARALLDKSPS---VN-GQFYFITDD--TPVRFFDFLSPLVKALGYCLPS--SIKLPLF-------L--  281 (361)
T ss_pred             EechhHHHHHHHHHHHHhcCCc---cC-ceEEEEeCC--CcchhhHHHHHHHHhcCCCCCc--eeecchH-------H--
Confidence            9999998 666665443 2111   34 789999988  67655555446 5555513332  1112211       1  


Q ss_pred             HHHHHHhhhhHHHHHHHHHhcC-CChHHHHHHHHHHhHHhhhhchhcceEEEechhHHHHHhcCCccccccccccCCCCC
Q psy3027         159 ILSFFLHTIPGFILDSLASLSG-RKPMLMAIYKKIDKASDTLEYFAHRQWVWTDHNVQALFNKLDPEDQELFFFDMGQMK  237 (300)
Q Consensus       159 i~~~~~~~lPa~~~D~~~~l~G-~kp~l~k~~~k~~~~~~~~~~f~~~~w~F~~~n~~~L~~~l~~~D~~~F~fD~~~id  237 (300)
                            -+.-+++...+..+.+ ..|.+.+.  ++..        +.-.-.|+..++++.+.-.+            .++
T Consensus       282 ------~~~~~~l~e~~~~~l~p~~p~lt~~--~v~~--------~~~~~~f~~~kA~~~lgY~P------------~~~  333 (361)
T KOG1430|consen  282 ------SYFLAYLLEIVYFLLRPYQPILTRF--RVAL--------LGVTRTFSIEKAKRELGYKP------------LVS  333 (361)
T ss_pred             ------HHHHHHHHHHHHHhccCCCCCcChh--heee--------eccccccCHHHHHHhhCCCC------------cCC
Confidence                  1112334444444555 45555441  2211        11244678888888777655            345


Q ss_pred             HHHHHHHHHH
Q psy3027         238 WEYYAEAMGL  247 (300)
Q Consensus       238 W~~Y~~~~~~  247 (300)
                      |++-.+.++.
T Consensus       334 ~~e~~~~~~~  343 (361)
T KOG1430|consen  334 LEEAIQRTIH  343 (361)
T ss_pred             HHHHHHHHHH
Confidence            6666555554

>PLN02427 UDP-apiose/xylose synthase

Probab=98.70  E-value=4.3e-08  Score=93.69  Aligned_cols=120  Identities=16%  Similarity=0.147  Sum_probs=81.1

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccc---cCCCChHH-HHHHHhhcceeeeccCCCcccce
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWI---DNVYGPIG-MLVGIATGVLHTHLINLNTVTDM   80 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~---d~~~g~~~-~~~~~~~G~l~~~~~~~~~~~di   80 (300)
                      +.|+.||.++|+++..+.  .+++++|+||+.|+|+..+.++|--   +.+..... ++.....|.--.+.++++...|.
T Consensus       180 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~  259 (386)
T PLN02427        180 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTF  259 (386)
T ss_pred             cchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECc
Confidence            579999999999998763  4899999999999998766555410   01111111 11222234322355666777899


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.||++++ ++.++....   .   .. ..+||++++. .++|+.|+.+. .+...
T Consensus       260 i~V~Dva~ai~~al~~~~---~---~~-g~~yni~~~~-~~~s~~el~~~i~~~~g  307 (386)
T PLN02427        260 VYIKDAIEAVLLMIENPA---R---AN-GHIFNVGNPN-NEVTVRQLAEMMTEVYA  307 (386)
T ss_pred             EeHHHHHHHHHHHHhCcc---c---cc-CceEEeCCCC-CCccHHHHHHHHHHHhc
Confidence            99999999 766653211   0   12 4699998751 37999999999 77665

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.67  E-value=6.1e-08  Score=90.59  Aligned_cols=113  Identities=22%  Similarity=0.270  Sum_probs=74.4

Q ss_pred             CCcHHHHHHHHHHHHHHHhc-CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHH-hhcceeeeccCCCcccceec
Q psy3027           5 WPNTYTFTKALAEDVLCKEG-KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGI-ATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~-~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~-~~G~l~~~~~~~~~~~diVP   82 (300)
                      ..+.|+.||+.+|+++.+.. .++|++|+||+.|.|+..   .|....-.....++.+. ..|.   .+.......|.+|
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~  234 (367)
T TIGR01746       161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSY---TGAINSSDILWRMVKGCLALGA---YPDSPELTEDLTP  234 (367)
T ss_pred             cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCC---CCCCCchhHHHHHHHHHHHhCC---CCCCCccccCccc
Confidence            35789999999999998874 489999999999999743   33221111111122211 2232   2322234678999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HH
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-AT  131 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~  131 (300)
                      ||++++ ++.++.....  .   .. ..+||++++  ++++|+|+.+. .+
T Consensus       235 vddva~ai~~~~~~~~~--~---~~-~~~~~v~~~--~~~s~~e~~~~i~~  277 (367)
T TIGR01746       235 VDYVARAIVALSSQPAA--S---AG-GPVFHVVNP--EPVSLDEFLEWLER  277 (367)
T ss_pred             HHHHHHHHHHHHhCCCc--c---cC-CceEEecCC--CCCCHHHHHHHHHH
Confidence            999999 7665532110  0   12 469999987  88999999999 76

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.63  E-value=1.1e-07  Score=89.78  Aligned_cols=116  Identities=12%  Similarity=-0.038  Sum_probs=81.1

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      +.|+.||..+|+++..+.  .++|++|+||+.|+|....|-.+    ... ...++.....|.--.+.++++..-|+|.|
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~----~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v  238 (348)
T PRK15181        163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGA----YSAVIPRWILSLLKDEPIYINGDGSTSRDFCYI  238 (348)
T ss_pred             ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCc----cccCHHHHHHHHHcCCCcEEeCCCCceEeeEEH
Confidence            579999999999998763  48999999999999976543211    111 12233333334333466788888899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |++|+ ++.++.+...  .   .. ..+||++++  .++|++|+.+. .+...
T Consensus       239 ~D~a~a~~~~~~~~~~--~---~~-~~~yni~~g--~~~s~~e~~~~i~~~~~  283 (348)
T PRK15181        239 ENVIQANLLSATTNDL--A---SK-NKVYNVAVG--DRTSLNELYYLIRDGLN  283 (348)
T ss_pred             HHHHHHHHHHHhcccc--c---CC-CCEEEecCC--CcEeHHHHHHHHHHHhC
Confidence            99999 7655422111  1   23 569999988  78999999999 76554

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.63  E-value=9.7e-08  Score=89.89  Aligned_cols=110  Identities=15%  Similarity=0.019  Sum_probs=80.5

Q ss_pred             cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||..+|+++...  ..++|++|+||+.|+|..+.|- +      ....++.....|.--.+.++++..-|+|.||
T Consensus       158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~------~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  230 (355)
T PRK10217        158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-K------LIPLMILNALAGKPLPVYGNGQQIRDWLYVE  230 (355)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-c------HHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence            67999999999999876  3489999999999999765321 1      1112223333443223557888889999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .++. ++.++. ..       .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       231 D~a~a~~~~~~-~~-------~~-~~~yni~~~--~~~s~~~~~~~i~~~~~  271 (355)
T PRK10217        231 DHARALYCVAT-TG-------KV-GETYNIGGH--NERKNLDVVETICELLE  271 (355)
T ss_pred             HHHHHHHHHHh-cC-------CC-CCeEEeCCC--CcccHHHHHHHHHHHhc
Confidence            9999 766652 11       22 569999998  88999999998 77766

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.58  E-value=1.5e-07  Score=86.38  Aligned_cols=110  Identities=16%  Similarity=0.040  Sum_probs=79.4

Q ss_pred             cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||+.+|+++...  ..++|++|+||+.|+|+...|- ++      ...++.....|..-.+.++++...|.|+||
T Consensus       148 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~------~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (317)
T TIGR01181       148 SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KL------IPLMITNALAGKPLPVYGDGQQVRDWLYVE  220 (317)
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cH------HHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence            46999999999999876  3589999999999999654321 11      112333344443223556777888999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+++ +..+..+ .       .. ..+||++++  .++|+.|+.+. .+.+.
T Consensus       221 D~a~~~~~~~~~-~-------~~-~~~~~~~~~--~~~s~~~~~~~i~~~~~  261 (317)
T TIGR01181       221 DHCRAIYLVLEK-G-------RV-GETYNIGGG--NERTNLEVVETILELLG  261 (317)
T ss_pred             HHHHHHHHHHcC-C-------CC-CceEEeCCC--CceeHHHHHHHHHHHhC
Confidence            9999 6555421 1       22 569999988  78999999999 87766

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.55  E-value=2.3e-07  Score=85.59  Aligned_cols=112  Identities=13%  Similarity=-0.024  Sum_probs=79.5

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHH-HHHhhcce-eeeccCCCcccceec
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGML-VGIATGVL-HTHLINLNTVTDMVP   82 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~-~~~~~G~l-~~~~~~~~~~~diVP   82 (300)
                      +.|+.||..+|++++++.  .++|++|+||+.|+|....+ .|.   +.+....+ ..+..|.. ....++++...|++.
T Consensus       138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~-~~~---~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~  213 (308)
T PRK11150        138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGH-KGS---MASVAFHLNNQLNNGENPKLFEGSENFKRDFVY  213 (308)
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCC-CCc---cchhHHHHHHHHhcCCCCEEecCCCceeeeeee
Confidence            689999999999998873  48999999999999976533 121   11111111 23344432 233456677889999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||++++ ++.++. .        .. ..+||++++  .++|+.|+.+. .+...
T Consensus       214 v~D~a~a~~~~~~-~--------~~-~~~yni~~~--~~~s~~el~~~i~~~~~  255 (308)
T PRK11150        214 VGDVAAVNLWFWE-N--------GV-SGIFNCGTG--RAESFQAVADAVLAYHK  255 (308)
T ss_pred             HHHHHHHHHHHHh-c--------CC-CCeEEcCCC--CceeHHHHHHHHHHHhC
Confidence            999999 776652 1        12 359999998  78999999999 77765

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.51  E-value=3.3e-07  Score=86.19  Aligned_cols=109  Identities=16%  Similarity=0.044  Sum_probs=79.9

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      |.|+.||+.+|+++...+  .++|++|+||+.|+|....+        .+.. .++.....|.--.+.++++...|.|.|
T Consensus       165 ~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  236 (352)
T PRK10084        165 SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP--------EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (352)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc--------cchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence            799999999999998763  48999999999999965422        1111 223333334322456778889999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |++++ ++.++. ..       .. ..+||++++  ++.|+.|+.+. .+..+
T Consensus       237 ~D~a~a~~~~l~-~~-------~~-~~~yni~~~--~~~s~~~~~~~i~~~~~  278 (352)
T PRK10084        237 EDHARALYKVVT-EG-------KA-GETYNIGGH--NEKKNLDVVLTICDLLD  278 (352)
T ss_pred             HHHHHHHHHHHh-cC-------CC-CceEEeCCC--CcCcHHHHHHHHHHHhc
Confidence            99999 765542 11       23 579999988  78999999999 77766

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.49  E-value=3.3e-07  Score=83.47  Aligned_cols=107  Identities=13%  Similarity=0.066  Sum_probs=73.9

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|+.||..+|+++.+.  ++|++|+||++|+|..+.      .++  ...++.....|.  .+...++...+.+.||+
T Consensus       121 ~~~Y~~~K~~~E~~~~~~--~~~~~ilR~~~v~G~~~~------~~~--~~~~~~~~~~~~--~~~~~~~~~~~~v~v~D  188 (287)
T TIGR01214       121 LNVYGQSKLAGEQAIRAA--GPNALIVRTSWLYGGGGG------RNF--VRTMLRLAGRGE--ELRVVDDQIGSPTYAKD  188 (287)
T ss_pred             cchhhHHHHHHHHHHHHh--CCCeEEEEeeecccCCCC------CCH--HHHHHHHhhcCC--CceEecCCCcCCcCHHH
Confidence            468999999999999876  689999999999986531      011  112232222232  12222345678899999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.. ..      .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       189 va~a~~~~~~~-~~------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~~  229 (287)
T TIGR01214       189 LARVIAALLQR-LA------RA-RGVYHLANS--GQCSWYEFAQAIFEEAG  229 (287)
T ss_pred             HHHHHHHHHhh-cc------CC-CCeEEEECC--CCcCHHHHHHHHHHHhC
Confidence            999 7666532 11      23 569999987  78999999999 77766

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.48  E-value=6.3e-07  Score=84.31  Aligned_cols=124  Identities=16%  Similarity=0.109  Sum_probs=82.8

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      |.|+.||..+|+++.++.  .++|++|+||+.|+|....|...=-++... ...++..+..|.--.+.++++..-|+|.|
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v  226 (347)
T PRK11908        147 WIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDI  226 (347)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccH
Confidence            479999999999998873  589999999999999766542110001111 11233333344322355567778899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP  138 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P  138 (300)
                      |++++ ++.++.....  .   .. ..+||++++ .+++|++|+.+. .+..+ ..|
T Consensus       227 ~D~a~a~~~~~~~~~~--~---~~-g~~yni~~~-~~~~s~~e~~~~i~~~~~-~~~  275 (347)
T PRK11908        227 DDGIDALMKIIENKDG--V---AS-GKIYNIGNP-KNNHSVRELANKMLELAA-EYP  275 (347)
T ss_pred             HHHHHHHHHHHhCccc--c---CC-CCeEEeCCC-CCCcCHHHHHHHHHHHhc-Ccc
Confidence            99999 7766532110  0   22 569999864 247999999999 87766 444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.46  E-value=3.9e-07  Score=93.38  Aligned_cols=110  Identities=16%  Similarity=0.066  Sum_probs=79.9

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      |.|+.||..+|+++.++.  .++|++|+||+.|+|..+.|     +++  ...++.....|..-.++++++...+.|+||
T Consensus       157 ~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~-----~~~--i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~  229 (668)
T PLN02260        157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-----EKL--IPKFILLAMQGKPLPIHGDGSNVRSYLYCE  229 (668)
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc-----ccH--HHHHHHHHhCCCCeEEecCCCceEeeEEHH
Confidence            679999999999998763  48999999999999976532     111  112223333343234667788888999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++++ +..++. ..       .. ..+||++++  +++|+.|+.+. .+.++
T Consensus       230 Dva~a~~~~l~-~~-------~~-~~vyni~~~--~~~s~~el~~~i~~~~g  270 (668)
T PLN02260        230 DVAEAFEVVLH-KG-------EV-GHVYNIGTK--KERRVIDVAKDICKLFG  270 (668)
T ss_pred             HHHHHHHHHHh-cC-------CC-CCEEEECCC--CeeEHHHHHHHHHHHhC
Confidence            9999 665542 11       22 569999988  78999999999 77665

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.45  E-value=4.5e-07  Score=99.76  Aligned_cols=115  Identities=17%  Similarity=0.239  Sum_probs=76.9

Q ss_pred             CCcHHHHHHHHHHHHHHHh-cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhccee-eeccCCCcccceec
Q psy3027           5 WPNTYTFTKALAEDVLCKE-GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLH-THLINLNTVTDMVP   82 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~-~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~-~~~~~~~~~~diVP   82 (300)
                      .++.|+.||+.||+++.++ ..++|++|+||+.|+|+...+.  |  +   ...++....++... ....+.....|.+|
T Consensus      1146 ~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~--~--~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 1218 (1389)
T TIGR03443      1146 LGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGA--T--N---TDDFLLRMLKGCIQLGLIPNINNTVNMVP 1218 (1389)
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCC--C--C---chhHHHHHHHHHHHhCCcCCCCCcccccc
Confidence            4578999999999999886 3589999999999999865421  2  1   12233322222211 11123445689999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||+|++ ++.++.....  .   .. ..+||++++  .+++|.++.+. .+...
T Consensus      1219 Vddva~ai~~~~~~~~~--~---~~-~~i~~~~~~--~~~~~~~~~~~l~~~g~ 1264 (1389)
T TIGR03443      1219 VDHVARVVVAAALNPPK--E---SE-LAVAHVTGH--PRIRFNDFLGTLKTYGY 1264 (1389)
T ss_pred             HHHHHHHHHHHHhCCcc--c---CC-CCEEEeCCC--CCCcHHHHHHHHHHhCC
Confidence            999999 7666532211  1   12 469999877  67999999999 76533

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.44  E-value=5.5e-07  Score=82.92  Aligned_cols=120  Identities=18%  Similarity=0.092  Sum_probs=80.1

Q ss_pred             cHHHHHHHHHHHHHHHhc---CCCCEEEecccEEeeccCCCccccccC-CCChHHHHHHHhhcc---eeee----c-cCC
Q psy3027           7 NTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVSTYREPVRGWIDN-VYGPIGMLVGIATGV---LHTH----L-INL   74 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~~~eP~pGw~d~-~~g~~~~~~~~~~G~---l~~~----~-~~~   74 (300)
                      +.|+.||+.+|+++.+..   .+++++|+||+.|+|...+++.|+... .......+.....|.   +...    + .++
T Consensus       143 ~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  222 (328)
T TIGR01179       143 NPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDG  222 (328)
T ss_pred             CchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCC
Confidence            679999999999998762   689999999999999876655554311 111112222222211   1111    1 244


Q ss_pred             Ccccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          75 NTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        75 ~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +...|.|++|.+++ +..++.....  .   .. ..+||++++  .++|++|+.+. .+..+
T Consensus       223 ~~~~~~v~~~D~a~~~~~~~~~~~~--~---~~-~~~~n~~~~--~~~s~~ei~~~~~~~~g  276 (328)
T TIGR01179       223 TCVRDYIHVMDLADAHLAALEYLLN--G---GE-SHVYNLGYG--QGFSVLEVIEAFKKVSG  276 (328)
T ss_pred             ceEEeeeeHHHHHHHHHHHHhhhhc--C---CC-cceEEcCCC--CcccHHHHHHHHHHHhC
Confidence            56679999999999 6655533221  1   22 579999987  78999999999 77766

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.42  E-value=5.6e-07  Score=87.81  Aligned_cols=111  Identities=10%  Similarity=-0.054  Sum_probs=80.8

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||..||+++.++.  .+++++|+||+.|+|....+-.|.     -...++.....|.--.+.++++..-|+|.||
T Consensus       261 s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~-----~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~  335 (436)
T PLN02166        261 SCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGR-----VVSNFVAQTIRKQPMTVYGDGKQTRSFQYVS  335 (436)
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccc-----hHHHHHHHHhcCCCcEEeCCCCeEEeeEEHH
Confidence            569999999999998873  489999999999999654321110     0122333344444334667888888999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++++ ++.++. .        .. ..+||++++  +++|+.|+.+. .+...
T Consensus       336 Dva~ai~~~~~-~--------~~-~giyNIgs~--~~~Si~ela~~I~~~~g  375 (436)
T PLN02166        336 DLVDGLVALME-G--------EH-VGPFNLGNP--GEFTMLELAEVVKETID  375 (436)
T ss_pred             HHHHHHHHHHh-c--------CC-CceEEeCCC--CcEeHHHHHHHHHHHhC
Confidence            9999 766552 1        12 459999987  78999999999 87766

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.39  E-value=1.4e-06  Score=80.29  Aligned_cols=113  Identities=13%  Similarity=0.070  Sum_probs=77.7

Q ss_pred             CcHHHHHHHHHHHHHHHh----cCCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcc-eeee-----ccCC
Q psy3027           6 PNTYTFTKALAEDVLCKE----GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGV-LHTH-----LINL   74 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~----~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~-l~~~-----~~~~   74 (300)
                      .+.|+.||..+|++++++    ..+++++|+||+.|+|+.+.+- |   ++.+.. .++.....|. +...     .+++
T Consensus       135 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (314)
T TIGR02197       135 LNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHK-G---KMASVAFHLFNQIKAGGNVKLFKSSEGFKDG  210 (314)
T ss_pred             CCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCC-C---CcccHHHHHHHHHhcCCCeEEecCccccCCC
Confidence            478999999999999874    3468999999999999765321 1   111111 2222223332 2211     2356


Q ss_pred             Ccccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          75 NTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        75 ~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +...|+++||++++ +..++.. .        . ..+||++++  .++|+.|+.+. .+..+
T Consensus       211 ~~~~~~i~v~D~a~~i~~~~~~-~--------~-~~~yni~~~--~~~s~~e~~~~i~~~~g  260 (314)
T TIGR02197       211 EQLRDFVYVKDVVDVNLWLLEN-G--------V-SGIFNLGTG--RARSFNDLADAVFKALG  260 (314)
T ss_pred             CceeeeEEHHHHHHHHHHHHhc-c--------c-CceEEcCCC--CCccHHHHHHHHHHHhC
Confidence            77789999999999 7666532 1        1 459999988  78999999999 77666

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.38  E-value=1.1e-06  Score=80.52  Aligned_cols=111  Identities=18%  Similarity=0.147  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCc-cccccCCCChHHHHHHHhhcce-eeeccCCCcccceecc
Q psy3027           8 TYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPV-RGWIDNVYGPIGMLVGIATGVL-HTHLINLNTVTDMVPS   83 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~-pGw~d~~~g~~~~~~~~~~G~l-~~~~~~~~~~~diVPV   83 (300)
                      .|+.||.+||+++.++..  ++|++|+||+.|+|..+.+. ++|     ....++.....|.. ....++++...+++.|
T Consensus       141 ~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  215 (314)
T COG0451         141 PYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSG-----VVSAFIRQLLKGEPIIVIGGDGSQTRDFVYV  215 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcC-----cHHHHHHHHHhCCCcceEeCCCceeEeeEeH
Confidence            499999999999999864  89999999999999766542 111     12233433444542 4566677777899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.++. ++.++..     .   .. . +||++++. .+.|.+|+.+. .+...
T Consensus       216 ~D~a~~~~~~~~~-----~---~~-~-~~ni~~~~-~~~~~~e~~~~~~~~~~  257 (314)
T COG0451         216 DDVADALLLALEN-----P---DG-G-VFNIGSGT-AEITVRELAEAVAEAVG  257 (314)
T ss_pred             HHHHHHHHHHHhC-----C---CC-c-EEEeCCCC-CcEEHHHHHHHHHHHhC
Confidence            99999 7666521     1   23 4 99999873 38999999999 77766

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.37  E-value=9.7e-07  Score=86.32  Aligned_cols=111  Identities=8%  Similarity=-0.102  Sum_probs=79.7

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|..||..||+++..+.  .+++++|+||+.|+|....+-.|-     ....++.....|.--.++++++..-|++.||
T Consensus       260 s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~-----~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~  334 (442)
T PLN02206        260 SCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGR-----VVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  334 (442)
T ss_pred             chHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccc-----hHHHHHHHHHcCCCcEEeCCCCEEEeEEeHH
Confidence            679999999999998763  489999999999999654211110     1122333333333224667788888999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++. ++.++.   .      .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       335 Dva~ai~~a~e---~------~~-~g~yNIgs~--~~~sl~Elae~i~~~~g  374 (442)
T PLN02206        335 DLVEGLMRLME---G------EH-VGPFNLGNP--GEFTMLELAKVVQETID  374 (442)
T ss_pred             HHHHHHHHHHh---c------CC-CceEEEcCC--CceeHHHHHHHHHHHhC
Confidence            9999 776652   1      12 458999988  78999999999 87765

>PLN02214 cinnamoyl-CoA reductase

Probab=98.35  E-value=1.7e-06  Score=81.49  Aligned_cols=107  Identities=21%  Similarity=0.214  Sum_probs=72.4

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||..||+++.++.  .++|++|+||+.|+|....|.      .......+.....|.... .  ++..-|+|.||
T Consensus       159 ~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~------~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~  229 (342)
T PLN02214        159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPT------INASLYHVLKYLTGSAKT-Y--ANLTQAYVDVR  229 (342)
T ss_pred             cHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHHHcCCccc-C--CCCCcCeeEHH
Confidence            579999999999998863  489999999999999754431      111112222233333222 1  23456999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +||+ ++.++.+ .       .. ...||++++   +.++.|+.+. .+...
T Consensus       230 Dva~a~~~al~~-~-------~~-~g~yn~~~~---~~~~~el~~~i~~~~~  269 (342)
T PLN02214        230 DVALAHVLVYEA-P-------SA-SGRYLLAES---ARHRGEVVEILAKLFP  269 (342)
T ss_pred             HHHHHHHHHHhC-c-------cc-CCcEEEecC---CCCHHHHHHHHHHHCC
Confidence            9999 7766632 1       12 348998753   5799999999 77654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.33  E-value=1.7e-06  Score=88.74  Aligned_cols=121  Identities=16%  Similarity=0.098  Sum_probs=80.8

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      +.|+.||.++|+++..+.  .++|++|+||+.|+|..+.+....-.+-.+.. .++.....|.--.+.++++..-|.|.|
T Consensus       461 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v  540 (660)
T PRK08125        461 WIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDI  540 (660)
T ss_pred             cchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeH
Confidence            369999999999998863  38999999999999976543211100001111 222233334332455777888999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ +++++.....  .   .. ..+||++++ .+++|++|+.+. .+..+
T Consensus       541 ~Dva~a~~~~l~~~~~--~---~~-g~iyni~~~-~~~~s~~el~~~i~~~~g  586 (660)
T PRK08125        541 RDGIEALFRIIENKDN--R---CD-GQIINIGNP-DNEASIRELAEMLLASFE  586 (660)
T ss_pred             HHHHHHHHHHHhcccc--c---cC-CeEEEcCCC-CCceeHHHHHHHHHHHhc
Confidence            99999 7666532110  1   23 569999986 236899999999 77766

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.31  E-value=1.6e-06  Score=79.54  Aligned_cols=113  Identities=11%  Similarity=-0.026  Sum_probs=75.5

Q ss_pred             HHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHH----Hhhcce-eeeccCCCcccce
Q psy3027           8 TYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG----IATGVL-HTHLINLNTVTDM   80 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~----~~~G~l-~~~~~~~~~~~di   80 (300)
                      .|..||..+|+++..+  ..++|++++||+.|+|... ...+-..++  ...++..    ...|.- ...+++++...|.
T Consensus       129 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~-~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~  205 (306)
T PLN02725        129 WYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHD-NFHPENSHV--IPALIRRFHEAKANGAPEVVVWGSGSPLREF  205 (306)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC-CCCCCCCcc--cHHHHHHHHHHhhcCCCeEEEcCCCCeeecc
Confidence            3999999999998775  3489999999999999753 111100011  1122211    122322 2236677878899


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.||.+++ ++.++.. .       .. ...||++++  .++|+.|+.+. .+.+.
T Consensus       206 i~v~Dv~~~~~~~~~~-~-------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~~  250 (306)
T PLN02725        206 LHVDDLADAVVFLMRR-Y-------SG-AEHVNVGSG--DEVTIKELAELVKEVVG  250 (306)
T ss_pred             ccHHHHHHHHHHHHhc-c-------cc-CcceEeCCC--CcccHHHHHHHHHHHhC
Confidence            99999999 6655521 1       12 457899887  78999999999 77765

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.30  E-value=1.2e-06  Score=85.61  Aligned_cols=117  Identities=12%  Similarity=0.087  Sum_probs=79.1

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCc---cccccCC------CChH-HHHHHHhhcceeeeccCC
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPV---RGWIDNV------YGPI-GMLVGIATGVLHTHLINL   74 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~---pGw~d~~------~g~~-~~~~~~~~G~l~~~~~~~   74 (300)
                      |.|+.||..+|+++..++  .++|++++||+.|+|..+.+-   |.-+.++      .+.. .++.....|.--.+.+++
T Consensus       226 s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G  305 (442)
T PLN02572        226 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKG  305 (442)
T ss_pred             CcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCC
Confidence            579999999999998874  389999999999999765331   1111111      1212 223333345433456777


Q ss_pred             Ccccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027          75 NTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV  132 (300)
Q Consensus        75 ~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~  132 (300)
                      +..-|+|.||+||+ ++.++.....  .   +. ..+||+.+   .++|++|+.+. .+.
T Consensus       306 ~~~Rdfi~V~Dva~a~~~al~~~~~--~---g~-~~i~Nigs---~~~si~el~~~i~~~  356 (442)
T PLN02572        306 GQTRGFLDIRDTVRCIEIAIANPAK--P---GE-FRVFNQFT---EQFSVNELAKLVTKA  356 (442)
T ss_pred             CEEECeEEHHHHHHHHHHHHhChhh--c---Cc-eeEEEeCC---CceeHHHHHHHHHHH
Confidence            88889999999999 7766532111  1   22 35899964   36999999999 776

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.24  E-value=3.2e-06  Score=80.62  Aligned_cols=112  Identities=11%  Similarity=0.008  Sum_probs=79.5

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCC-CChHHHHHHHhh-cceeeeccCCCcccceec
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNV-YGPIGMLVGIAT-GVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~-~g~~~~~~~~~~-G~l~~~~~~~~~~~diVP   82 (300)
                      +.|+.+|..+|+++..+.  .++|++|+||+.|+|....    |-++- .-+..++..... +..-.++++++...|+|.
T Consensus       165 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~  240 (370)
T PLN02695        165 DAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGT----WKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTF  240 (370)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCC----ccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEe
Confidence            589999999999998863  4899999999999996432    21111 113344433322 222246678888899999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||+++. +..++. .        .. ..+||++++  +++|++|+.+. .+...
T Consensus       241 v~D~a~ai~~~~~-~--------~~-~~~~nv~~~--~~~s~~el~~~i~~~~g  282 (370)
T PLN02695        241 IDECVEGVLRLTK-S--------DF-REPVNIGSD--EMVSMNEMAEIALSFEN  282 (370)
T ss_pred             HHHHHHHHHHHHh-c--------cC-CCceEecCC--CceeHHHHHHHHHHHhC
Confidence            999999 665432 1        12 458999987  78999999999 77655

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.19  E-value=6.1e-06  Score=76.39  Aligned_cols=106  Identities=14%  Similarity=0.209  Sum_probs=72.0

Q ss_pred             cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||.++|+++.++  ..++|++|+||+.|+|....|..+      .....+.....|.-    ..++...|.|.||
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~----~~~~~~~~~i~v~  229 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLN------TSAEAILNLINGAQ----TFPNASYRWVDVR  229 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCC------chHHHHHHHhcCCc----cCCCCCcCeEEHH
Confidence            57999999999999876  348999999999999976544211      11222222222321    1234567999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .||+ ++.++. ..       .. ...||++ +  .++|+.|+.+. .+...
T Consensus       230 Dva~a~~~~~~-~~-------~~-~~~~~~~-g--~~~s~~e~~~~i~~~~~  269 (322)
T PLN02662        230 DVANAHIQAFE-IP-------SA-SGRYCLV-E--RVVHYSEVVKILHELYP  269 (322)
T ss_pred             HHHHHHHHHhc-Cc-------Cc-CCcEEEe-C--CCCCHHHHHHHHHHHCC
Confidence            9999 766652 11       11 3478886 4  57999999999 77654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=98.17  E-value=6e-06  Score=76.71  Aligned_cols=106  Identities=18%  Similarity=0.221  Sum_probs=73.0

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|..||.+||+++.++.  .+++++|+||+.|+|....|..    ++  ...++..+..|.-  ..  ++...+.|.||
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~----~~--~~~~~~~~~~g~~--~~--~~~~~~~v~v~  230 (322)
T PLN02986        161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTL----NF--SVELIVDFINGKN--LF--NNRFYRFVDVR  230 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCC----Cc--cHHHHHHHHcCCC--CC--CCcCcceeEHH
Confidence            669999999999998863  4899999999999997665421    11  1233333333331  11  23446899999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+|+ ++.++.. .       .. ..+||+ ++  .++|++|+.+. .+.+.
T Consensus       231 Dva~a~~~al~~-~-------~~-~~~yni-~~--~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        231 DVALAHIKALET-P-------SA-NGRYII-DG--PIMSVNDIIDILRELFP  270 (322)
T ss_pred             HHHHHHHHHhcC-c-------cc-CCcEEE-ec--CCCCHHHHHHHHHHHCC
Confidence            9999 7766532 1       11 348998 44  47999999999 77655

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.16  E-value=6.2e-06  Score=76.65  Aligned_cols=106  Identities=15%  Similarity=0.205  Sum_probs=71.4

Q ss_pred             cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||..+|+++..+  ..++|++|+||+.|+|....|..+    +  ...++.....|-..  .+  ...-|++.||
T Consensus       162 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~----~--~~~~i~~~~~~~~~--~~--~~~r~~i~v~  231 (325)
T PLN02989        162 QWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLN----F--SVAVIVELMKGKNP--FN--TTHHRFVDVR  231 (325)
T ss_pred             cchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCC----c--hHHHHHHHHcCCCC--CC--CcCcCeeEHH
Confidence            57999999999999876  348999999999999976654311    1  12233333233211  11  2234899999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++|+ ++.++.. .       .. ..+||+ ++  .++|++|+.+. .+...
T Consensus       232 Dva~a~~~~l~~-~-------~~-~~~~ni-~~--~~~s~~ei~~~i~~~~~  271 (325)
T PLN02989        232 DVALAHVKALET-P-------SA-NGRYII-DG--PVVTIKDIENVLREFFP  271 (325)
T ss_pred             HHHHHHHHHhcC-c-------cc-CceEEE-ec--CCCCHHHHHHHHHHHCC
Confidence            9999 7666521 1       12 348999 44  37999999999 77655

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.12  E-value=8.5e-06  Score=76.29  Aligned_cols=110  Identities=13%  Similarity=0.012  Sum_probs=68.9

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeecc-CC----Ccccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLI-NL----NTVTD   79 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~-~~----~~~~d   79 (300)
                      +.|+.||..+|+++..+.  .+++++|+||+.|+|..+.+.   +   ....+++.....|.--...+ ++    +...|
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~---~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  239 (338)
T PLN00198        166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSD---I---PSSLSLAMSLITGNEFLINGLKGMQMLSGSIS  239 (338)
T ss_pred             chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCC---C---CCcHHHHHHHHcCCccccccccccccccCCcc
Confidence            359999999999998863  389999999999999765321   1   11112222222232111111 11    12359


Q ss_pred             eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .|.||++|+ ++.++.. .       .. ..+|+ +++  .++|+.|+.+. .+...
T Consensus       240 ~i~V~D~a~a~~~~~~~-~-------~~-~~~~~-~~~--~~~s~~el~~~i~~~~~  284 (338)
T PLN00198        240 ITHVEDVCRAHIFLAEK-E-------SA-SGRYI-CCA--ANTSVPELAKFLIKRYP  284 (338)
T ss_pred             eeEHHHHHHHHHHHhhC-c-------Cc-CCcEE-Eec--CCCCHHHHHHHHHHHCC
Confidence            999999999 7666532 1       11 23675 444  46899999999 76554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.08  E-value=7.8e-06  Score=77.01  Aligned_cols=117  Identities=13%  Similarity=0.001  Sum_probs=77.5

Q ss_pred             cHHHHHHHHHHHHHHHhc---------CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcc
Q psy3027           7 NTYTFTKALAEDVLCKEG---------KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTV   77 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~---------~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~   77 (300)
                      +.|+.||..+|.+++.++         .+++++++||+.|+|..+.. +   +++  ...++.....|..- ..++++..
T Consensus       150 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~---~~~--~~~~~~~~~~g~~~-~~~~g~~~  222 (349)
T TIGR02622       150 DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-E---DRL--IPDVIRAFSSNKIV-IIRNPDAT  222 (349)
T ss_pred             CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-h---hhh--hHHHHHHHhcCCCe-EECCCCcc
Confidence            679999999999997752         28999999999999854210 0   111  11233333344332 23467788


Q ss_pred             cceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          78 TDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        78 ~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      -|+|.||++|+ ++.++.+......   .. ..+||++|+...+.|..|+.+. .+...
T Consensus       223 rd~i~v~D~a~a~~~~~~~~~~~~~---~~-~~~yni~s~~~~~~s~~~~~~~i~~~~~  277 (349)
T TIGR02622       223 RPWQHVLEPLSGYLLLAEKLFTGQA---EF-AGAWNFGPRASDNARVVELVVDALEFWW  277 (349)
T ss_pred             cceeeHHHHHHHHHHHHHHHhhcCc---cc-cceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence            89999999999 7766532211001   12 4599999865478999999988 66544

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.06  E-value=3.7e-05  Score=71.01  Aligned_cols=106  Identities=15%  Similarity=0.141  Sum_probs=70.6

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|..||..+|+++.++.  .++|++|+||+.|+|.....       ......++.....+..   +...+...|.|.||
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~  208 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIK-------PTPTGRIIVDFLNGKM---PAYVDTGLNLVHVD  208 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCC-------CCcHHHHHHHHHcCCC---ceeeCCCcceEEHH
Confidence            479999999999999873  48999999999999865310       0011123332222221   11123446899999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+++ ++.++.. .       .. ..+|+++ +  .++|++|+.+. .+..+
T Consensus       209 D~a~a~~~~~~~-~-------~~-~~~~~~~-~--~~~s~~e~~~~i~~~~g  248 (328)
T TIGR03466       209 DVAEGHLLALER-G-------RI-GERYILG-G--ENLTLKQILDKLAEITG  248 (328)
T ss_pred             HHHHHHHHHHhC-C-------CC-CceEEec-C--CCcCHHHHHHHHHHHhC
Confidence            9999 7666532 1       22 4578774 4  57999999999 77766

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02240 UDP-glucose 4-epimerase

Probab=98.03  E-value=1.5e-05  Score=74.81  Aligned_cols=123  Identities=14%  Similarity=0.009  Sum_probs=78.0

Q ss_pred             CcHHHHHHHHHHHHHHHhc---CCCCEEEecccEEeeccCCCcccccc-CC-CChHHHHHHHhhccee--eecc------
Q psy3027           6 PNTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVSTYREPVRGWID-NV-YGPIGMLVGIATGVLH--THLI------   72 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~~~eP~pGw~d-~~-~g~~~~~~~~~~G~l~--~~~~------   72 (300)
                      .+.|+.||..+|+++.+..   .+++++++||+.|+|......-|.-. .+ .+...++.....|...  .+.+      
T Consensus       153 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  232 (352)
T PLN02240        153 TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTK  232 (352)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCC
Confidence            4789999999999998652   47999999999888865321112110 00 1111223223223211  1222      


Q ss_pred             CCCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          73 NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        73 ~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++..-|.|.||++++ ++.++........   .. ..+||++++  .++|++|+.+. .+...
T Consensus       233 ~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~---~~-~~~yni~~~--~~~s~~el~~~i~~~~g  290 (352)
T PLN02240        233 DGTGVRDYIHVMDLADGHIAALRKLFTDPD---IG-CEAYNLGTG--KGTSVLEMVAAFEKASG  290 (352)
T ss_pred             CCCEEEeeEEHHHHHHHHHHHHhhhhhccC---CC-CceEEccCC--CcEeHHHHHHHHHHHhC
Confidence            4567789999999999 7766643211001   22 469999988  78999999999 77665

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.03  E-value=1.7e-05  Score=72.84  Aligned_cols=132  Identities=16%  Similarity=0.057  Sum_probs=93.7

Q ss_pred             cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccc-cccCCCChHHHHHHHhhcceee--ecc------CCC
Q psy3027           7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRG-WIDNVYGPIGMLVGIATGVLHT--HLI------NLN   75 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pG-w~d~~~g~~~~~~~~~~G~l~~--~~~------~~~   75 (300)
                      |+|+.||.+.|++++..  ..++.++|+|==-+.|+..+..-| |-.+.+....++..+..|....  +.|      |+.
T Consensus       140 NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT  219 (329)
T COG1087         140 NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGT  219 (329)
T ss_pred             CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCC
Confidence            79999999999999988  458999999999999888754444 4445544445555555565442  333      455


Q ss_pred             cccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcccccccc
Q psy3027          76 TVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIRAIWYF  146 (300)
Q Consensus        76 ~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~~l~~P  146 (300)
                      .+=|.|.|.+.++ -++|.-....  .   +. ..+||+.++  +..|..|+++. .+..+...|.+-.-+.|
T Consensus       220 ~iRDYIHV~DLA~aH~~Al~~L~~--~---g~-~~~~NLG~G--~G~SV~evi~a~~~vtg~~ip~~~~~RR~  284 (329)
T COG1087         220 CIRDYIHVDDLADAHVLALKYLKE--G---GS-NNIFNLGSG--NGFSVLEVIEAAKKVTGRDIPVEIAPRRA  284 (329)
T ss_pred             eeeeeeehhHHHHHHHHHHHHHHh--C---Cc-eeEEEccCC--CceeHHHHHHHHHHHhCCcCceeeCCCCC
Confidence            6669999999999 6666543332  1   33 469999999  88999999999 77666355554333333

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.02  E-value=5.9e-06  Score=72.57  Aligned_cols=95  Identities=20%  Similarity=0.192  Sum_probs=68.8

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      +.|..+|..+|+++.++.  .+++++|+||+.|+|.. .|-    .+..+.. .++..+.+|.--.++++++...|++.|
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  212 (236)
T PF01370_consen  138 SPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-NPN----NNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHV  212 (236)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-SSS----SSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEH
T ss_pred             ccccccccccccccccccccccccccccccccccccc-ccc----cccccccchhhHHhhcCCcccccCCCCCccceEEH
Confidence            569999999999999884  38999999999999977 111    1122222 344455567644677889999999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEee
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFV  114 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~  114 (300)
                      |++++ ++.++.+..       .. ..+||++
T Consensus       213 ~D~a~~~~~~~~~~~-------~~-~~~yNig  236 (236)
T PF01370_consen  213 DDLAEAIVAALENPK-------AA-GGIYNIG  236 (236)
T ss_dssp             HHHHHHHHHHHHHSC-------TT-TEEEEES
T ss_pred             HHHHHHHHHHHhCCC-------CC-CCEEEeC
Confidence            99999 766663222       13 5799974

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02650 dihydroflavonol-4-reductase

Probab=97.99  E-value=2.3e-05  Score=73.79  Aligned_cols=106  Identities=17%  Similarity=0.171  Sum_probs=68.2

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHH--hhcceeeeccCCCcccceec
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGI--ATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~--~~G~l~~~~~~~~~~~diVP   82 (300)
                      +.|+.||..+|+++..+.  .+++++|+||+.|+|....+.      .  +..++...  ..|... ..+.. ...|+|.
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~------~--~~~~~~~~~~~~~~~~-~~~~~-~~r~~v~  230 (351)
T PLN02650        161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS------M--PPSLITALSLITGNEA-HYSII-KQGQFVH  230 (351)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC------C--CccHHHHHHHhcCCcc-ccCcC-CCcceee
Confidence            479999999999998873  389999999999999755321      1  11122111  112111 11111 2359999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||++++ ++.++.. .       .. ..+| ++++  .++|+.|+.+. .+...
T Consensus       231 V~Dva~a~~~~l~~-~-------~~-~~~~-i~~~--~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        231 LDDLCNAHIFLFEH-P-------AA-EGRY-ICSS--HDATIHDLAKMLREKYP  272 (351)
T ss_pred             HHHHHHHHHHHhcC-c-------Cc-CceE-EecC--CCcCHHHHHHHHHHhCc
Confidence            999999 7666531 1       11 3478 4555  56899999999 77554

>KOG0747|consensus

Probab=97.98  E-value=1.4e-05  Score=72.60  Aligned_cols=115  Identities=16%  Similarity=0.044  Sum_probs=82.3

Q ss_pred             CcHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           6 PNTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      -|.|..||+.||++|+.+..  ++|++|+|-+-|+|..+-|.-       ..--++.....|---++.|++...-+-+.|
T Consensus       154 tnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~k-------lipkFi~l~~~~~~~~i~g~g~~~rs~l~v  226 (331)
T KOG0747|consen  154 TNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEK-------LIPKFIKLAMRGKEYPIHGDGLQTRSYLYV  226 (331)
T ss_pred             CCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHH-------HhHHHHHHHHhCCCcceecCcccceeeEeH
Confidence            37999999999999999943  899999999999998775520       000122222223333577788888899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP  138 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P  138 (300)
                      +.+++ +-+++.+ +.       . +.|||+.+.  -+++..|+.+. .+.+..+.|
T Consensus       227 eD~~ea~~~v~~K-g~-------~-geIYNIgtd--~e~~~~~l~k~i~eli~~~~~  272 (331)
T KOG0747|consen  227 EDVSEAFKAVLEK-GE-------L-GEIYNIGTD--DEMRVIDLAKDICELFEKRLP  272 (331)
T ss_pred             HHHHHHHHHHHhc-CC-------c-cceeeccCc--chhhHHHHHHHHHHHHHHhcc
Confidence            99999 6555433 32       2 679999976  78899999888 766652333

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=97.98  E-value=2.2e-05  Score=72.56  Aligned_cols=105  Identities=15%  Similarity=0.122  Sum_probs=63.4

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccC--CCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLIN--LNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~--~~~~~diVPVD   84 (300)
                      |.|+.||..+|+++..+..  +.+|+||+.|+|....       ++  ...++.....|---.+.++  ++..-+..-+|
T Consensus       126 ~~Yg~sK~~~E~~~~~~~~--~~~ilR~~~vyGp~~~-------~~--~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d  194 (299)
T PRK09987        126 NVYGETKLAGEKALQEHCA--KHLIFRTSWVYAGKGN-------NF--AKTMLRLAKEREELSVINDQFGAPTGAELLAD  194 (299)
T ss_pred             CHHHHHHHHHHHHHHHhCC--CEEEEecceecCCCCC-------CH--HHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHH
Confidence            7899999999999987643  6799999999985431       11  1122222222322123333  22221223366


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHc
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVC  133 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~  133 (300)
                      .++. +..+. ...       .. ..+||++++  +++|+.|+.+. .+..
T Consensus       195 ~~~~~~~~~~-~~~-------~~-~giyni~~~--~~~s~~e~~~~i~~~~  234 (299)
T PRK09987        195 CTAHAIRVAL-NKP-------EV-AGLYHLVAS--GTTTWHDYAALVFEEA  234 (299)
T ss_pred             HHHHHHHHhh-ccC-------CC-CCeEEeeCC--CCccHHHHHHHHHHHH
Confidence            6666 44333 111       12 359999998  78999999998 6643

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=97.97  E-value=4e-06  Score=77.29  Aligned_cols=111  Identities=15%  Similarity=0.117  Sum_probs=70.5

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      |.|+.||.++|+.|.+...  -..|+|+|.|+|.....+..|         ++-....|-  .+....+.....+.|+.+
T Consensus       123 ~~YG~~K~~~E~~v~~~~~--~~~IlR~~~~~g~~~~~~~~~---------~~~~~~~~~--~i~~~~d~~~~p~~~~dl  189 (286)
T PF04321_consen  123 NVYGRSKLEGEQAVRAACP--NALILRTSWVYGPSGRNFLRW---------LLRRLRQGE--PIKLFDDQYRSPTYVDDL  189 (286)
T ss_dssp             SHHHHHHHHHHHHHHHH-S--SEEEEEE-SEESSSSSSHHHH---------HHHHHHCTS--EEEEESSCEE--EEHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcC--CEEEEecceecccCCCchhhh---------HHHHHhcCC--eeEeeCCceeCCEEHHHH
Confidence            7899999999999998654  799999999999744323222         222222333  233345777789999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP  138 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P  138 (300)
                      |. ++..+.+.... .   .. ..|||++++  .++|+.|+.+. .+.++ ..+
T Consensus       190 A~~i~~l~~~~~~~-~---~~-~Giyh~~~~--~~~S~~e~~~~i~~~~~-~~~  235 (286)
T PF04321_consen  190 ARVILELIEKNLSG-A---SP-WGIYHLSGP--ERVSRYEFAEAIAKILG-LDP  235 (286)
T ss_dssp             HHHHHHHHHHHHH--G---GG--EEEE---B--S-EEHHHHHHHHHHHHT-HCT
T ss_pred             HHHHHHHHHhcccc-c---cc-ceeEEEecC--cccCHHHHHHHHHHHhC-CCC
Confidence            99 76666432210 0   12 479999998  78999999999 88777 443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=97.95  E-value=2.4e-05  Score=72.24  Aligned_cols=103  Identities=11%  Similarity=0.032  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           8 TYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .|..||.+||+++.++  ..+++++++||+.|.|....+..          .    ...|... .  -++...++|.||+
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----------~----~~~~~~~-~--~~~~~~~~v~V~D  224 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----------P----YLKGAAQ-M--YENGVLVTVDVNF  224 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----------h----hhcCCcc-c--CcccCcceEEHHH
Confidence            5999999999999775  34899999999999986543211          0    1111111 1  1223457999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCc
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPT  139 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~  139 (300)
                      ||+ +++|+.+ ..      .  ...|.|+++  +..+++++.++ ++.+- .+|.
T Consensus       225 va~a~~~al~~-~~------~--~~r~~~~~~--~~~~~~~~~~~~~~~~p-~~~~  268 (297)
T PLN02583        225 LVDAHIRAFED-VS------S--YGRYLCFNH--IVNTEEDAVKLAQMLSP-LIPS  268 (297)
T ss_pred             HHHHHHHHhcC-cc------c--CCcEEEecC--CCccHHHHHHHHHHhCC-CCCC
Confidence            999 7777632 11      2  336888876  44567889999 77655 5554

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=97.93  E-value=3.5e-05  Score=71.90  Aligned_cols=121  Identities=16%  Similarity=0.100  Sum_probs=75.7

Q ss_pred             CcHHHHHHHHHHHHHHHhc---CCCCEEEecccEEeeccCCCccccccC--CCChHHHHHHHhhccee--eecc------
Q psy3027           6 PNTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVSTYREPVRGWIDN--VYGPIGMLVGIATGVLH--THLI------   72 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~~~eP~pGw~d~--~~g~~~~~~~~~~G~l~--~~~~------   72 (300)
                      .+.|..||..+|+++.++.   .+++++|+||+.|+|....-+-|--+.  .......+.....|...  .+.+      
T Consensus       146 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (338)
T PRK10675        146 QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_pred             CChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCC
Confidence            4689999999999998763   479999999999988542101010000  00111222222222111  1111      


Q ss_pred             CCCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          73 NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        73 ~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++...|+|.||.+++ ++.++.....  .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       226 ~g~~~~~~v~v~D~a~~~~~~~~~~~~--~---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  281 (338)
T PRK10675        226 DGTGVRDYIHVMDLADGHVAAMEKLAN--K---PG-VHIYNLGAG--VGSSVLDVVNAFSKACG  281 (338)
T ss_pred             CCcEEEeeEEHHHHHHHHHHHHHhhhc--c---CC-CceEEecCC--CceeHHHHHHHHHHHhC
Confidence            4566789999999999 7666532111  1   12 469999987  78999999999 77665

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=97.93  E-value=2.2e-05  Score=73.73  Aligned_cols=110  Identities=16%  Similarity=-0.034  Sum_probs=76.4

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCC-CC-hHHHHHHHhhcc-eeeeccCCCccccee
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNV-YG-PIGMLVGIATGV-LHTHLINLNTVTDMV   81 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~-~g-~~~~~~~~~~G~-l~~~~~~~~~~~diV   81 (300)
                      |.|+.||..+|++++.++  .++++++.|+.-++|...    |  +++ .. ....+.....|. .....++++..-|+|
T Consensus       154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  227 (343)
T TIGR01472       154 SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRR----G--ENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWG  227 (343)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC----C--ccccchHHHHHHHHHHcCCCCceeeCCCccccCce
Confidence            689999999999998874  378999888876665431    1  111 11 111222233343 234557888899999


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .||++|+ ++.++. .        .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       228 ~V~D~a~a~~~~~~-~--------~~-~~~yni~~g--~~~s~~e~~~~i~~~~g  270 (343)
T TIGR01472       228 HAKDYVEAMWLMLQ-Q--------DK-PDDYVIATG--ETHSVREFVEVSFEYIG  270 (343)
T ss_pred             eHHHHHHHHHHHHh-c--------CC-CccEEecCC--CceeHHHHHHHHHHHcC
Confidence            9999999 776652 1        12 358999998  78999999999 77666

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN00016 RNA-binding protein; Provisional

Probab=97.93  E-value=3.7e-05  Score=73.41  Aligned_cols=103  Identities=14%  Similarity=0.049  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-cc
Q psy3027          12 TKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-PS   90 (300)
Q Consensus        12 TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i   90 (300)
                      +|..+|+.+++  .++|++|+||+.|+|.....      +  ....++.....|..-.++++++...+++.||++++ ++
T Consensus       188 sK~~~E~~l~~--~~l~~~ilRp~~vyG~~~~~------~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~  257 (378)
T PLN00016        188 GHLEVEAYLQK--LGVNWTSFRPQYIYGPGNNK------D--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFA  257 (378)
T ss_pred             hHHHHHHHHHH--cCCCeEEEeceeEECCCCCC------c--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHH
Confidence            89999999875  48999999999999865421      0  00112222333432245667788889999999999 66


Q ss_pred             cccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          91 EGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        91 ~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .++.. .   .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       258 ~~l~~-~---~---~~-~~~yni~~~--~~~s~~el~~~i~~~~g  292 (378)
T PLN00016        258 LVVGN-P---K---AA-GQIFNIVSD--RAVTFDGMAKACAKAAG  292 (378)
T ss_pred             HHhcC-c---c---cc-CCEEEecCC--CccCHHHHHHHHHHHhC
Confidence            55532 1   1   23 579999987  78999999999 77766

>PLN02686 cinnamoyl-CoA reductase

Probab=97.91  E-value=3.3e-05  Score=73.66  Aligned_cols=107  Identities=16%  Similarity=0.037  Sum_probs=71.4

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||..+|+++..+.  .+++++++||+.|+|....+.        .+..++ ....|.. .+.+++  ..+.|.||
T Consensus       214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~--------~~~~~~-~~~~g~~-~~~g~g--~~~~v~V~  281 (367)
T PLN02686        214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRR--------NSTATI-AYLKGAQ-EMLADG--LLATADVE  281 (367)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCC--------CChhHH-HHhcCCC-ccCCCC--CcCeEEHH
Confidence            469999999999998763  489999999999999643210        122222 2223432 233333  34699999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .|++ +++++.....  .   .. ..+| ++++  .++++.|+.+. .+..+
T Consensus       282 Dva~A~~~al~~~~~--~---~~-~~~y-i~~g--~~~s~~e~~~~i~~~~g  324 (367)
T PLN02686        282 RLAEAHVCVYEAMGN--K---TA-FGRY-ICFD--HVVSREDEAEELARQIG  324 (367)
T ss_pred             HHHHHHHHHHhccCC--C---CC-CCcE-EEeC--CCccHHHHHHHHHHHcC
Confidence            9999 7766632111  1   12 4578 7776  67999999999 77765

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.83  E-value=0.00019  Score=66.72  Aligned_cols=102  Identities=15%  Similarity=0.119  Sum_probs=68.1

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      ..|..+|..+|+.+++  .++|++|+||+.+++..       +..      .....-.+. ......++...+.|.||++
T Consensus       119 ~~~~~~K~~~e~~l~~--~~l~~tilRp~~~~~~~-------~~~------~~~~~~~~~-~~~~~~~~~~~~~i~v~Dv  182 (317)
T CHL00194        119 IPLMKLKSDIEQKLKK--SGIPYTIFRLAGFFQGL-------ISQ------YAIPILEKQ-PIWITNESTPISYIDTQDA  182 (317)
T ss_pred             ChHHHHHHHHHHHHHH--cCCCeEEEeecHHhhhh-------hhh------hhhhhccCC-ceEecCCCCccCccCHHHH
Confidence            5689999999999875  58999999999554211       000      000000111 1222345666799999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ +..++.. ..      .. ..+||++++  .++|++|+.+. .+..+
T Consensus       183 a~~~~~~l~~-~~------~~-~~~~ni~g~--~~~s~~el~~~~~~~~g  222 (317)
T CHL00194        183 AKFCLKSLSL-PE------TK-NKTFPLVGP--KSWNSSEIISLCEQLSG  222 (317)
T ss_pred             HHHHHHHhcC-cc------cc-CcEEEecCC--CccCHHHHHHHHHHHhC
Confidence            99 6555421 11      23 579999988  78999999999 87766

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.80  E-value=8.2e-05  Score=67.49  Aligned_cols=105  Identities=12%  Similarity=-0.004  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHHHHhc-CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           8 TYTFTKALAEDVLCKEG-KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~-~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      .|..+|...|+.+.... .++|++|+||+.|+|...    |++.      .++.....+. ....++++...|.|.||.+
T Consensus       135 ~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~----~~~~------~~~~~~~~~~-~~~~g~~~~~~~~i~v~Dv  203 (292)
T TIGR01777       135 FLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG----GALA------KMLPPFRLGL-GGPLGSGRQWFSWIHIEDL  203 (292)
T ss_pred             hHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc----chhH------HHHHHHhcCc-ccccCCCCcccccEeHHHH
Confidence            34566767787766543 479999999999999532    2211      1111111111 1124567888899999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +. +..++. ..       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       204 a~~i~~~l~-~~-------~~-~g~~~~~~~--~~~s~~di~~~i~~~~g  242 (292)
T TIGR01777       204 VQLILFALE-NA-------SI-SGPVNATAP--EPVRNKEFAKALARALH  242 (292)
T ss_pred             HHHHHHHhc-Cc-------cc-CCceEecCC--CccCHHHHHHHHHHHhC
Confidence            99 665552 11       22 458999987  78999999999 77666

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=97.74  E-value=6.7e-05  Score=70.77  Aligned_cols=108  Identities=16%  Similarity=0.115  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCC-ccccccCCCChHHHHHH--HhhcceeeeccC---CCcccc
Q psy3027           8 TYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREP-VRGWIDNVYGPIGMLVG--IATGVLHTHLIN---LNTVTD   79 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP-~pGw~d~~~g~~~~~~~--~~~G~l~~~~~~---~~~~~d   79 (300)
                      .|+.||.+||+++.++.  .+++++|+||+.|+|....+ +|.++.       .+..  .|.+......+.   .....|
T Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~d  247 (353)
T PLN02896        175 VYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQ-------VLLSPITGDSKLFSILSAVNSRMGSIA  247 (353)
T ss_pred             cHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHH-------HHHHHhcCCccccccccccccccCcee
Confidence            79999999999998873  48999999999999976543 222221       1111  111111111111   111348


Q ss_pred             eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +|.||.+|+ ++.++.. .       .. ..+|++ ++  .+++++|+.+. .+...
T Consensus       248 fi~v~Dva~a~~~~l~~-~-------~~-~~~~~~-~~--~~~s~~el~~~i~~~~~  292 (353)
T PLN02896        248 LVHIEDICDAHIFLMEQ-T-------KA-EGRYIC-CV--DSYDMSELINHLSKEYP  292 (353)
T ss_pred             EEeHHHHHHHHHHHHhC-C-------Cc-CccEEe-cC--CCCCHHHHHHHHHHhCC
Confidence            999999999 7766531 1       11 246864 44  57999999999 77654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=97.61  E-value=0.00017  Score=67.49  Aligned_cols=109  Identities=15%  Similarity=-0.092  Sum_probs=73.6

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHH----HHHhhcc-eeeeccCCCccc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGML----VGIATGV-LHTHLINLNTVT   78 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~----~~~~~G~-l~~~~~~~~~~~   78 (300)
                      .+.|..||..+|+++..++  .+++++..|+.-+++.      |..+++-  ...+    ...-.|. .....++++..-
T Consensus       159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~~r  230 (340)
T PLN02653        159 RSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESP------RRGENFV--TRKITRAVGRIKVGLQKKLFLGNLDASR  230 (340)
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCC------CCCcccc--hhHHHHHHHHHHcCCCCceEeCCCccee
Confidence            3579999999999998763  3677777777665553      2212211  1111    1122333 223457788889


Q ss_pred             ceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          79 DMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        79 diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |++.||.+++ ++.++..         .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       231 d~i~v~D~a~a~~~~~~~---------~~-~~~yni~~g--~~~s~~e~~~~i~~~~g  276 (340)
T PLN02653        231 DWGFAGDYVEAMWLMLQQ---------EK-PDDYVVATE--ESHTVEEFLEEAFGYVG  276 (340)
T ss_pred             cceeHHHHHHHHHHHHhc---------CC-CCcEEecCC--CceeHHHHHHHHHHHcC
Confidence            9999999999 7766521         12 358999988  88999999999 77665

>KOG1502|consensus

Probab=97.61  E-value=0.00028  Score=65.84  Aligned_cols=111  Identities=18%  Similarity=0.230  Sum_probs=82.6

Q ss_pred             cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|..||.+||+...+.  ..+++++.+-|+.|.|+.-.|      .++...-.++..-+|.....+   +....+|.||
T Consensus       162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~------~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVr  232 (327)
T KOG1502|consen  162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP------SLNSSLNALLKLIKGLAETYP---NFWLAFVDVR  232 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc------ccchhHHHHHHHHhcccccCC---CCceeeEeHH
Confidence            57999999999999988  358999999999999966554      456656666677777654443   3334489999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCc
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPT  139 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~  139 (300)
                      +||+ .+.|..+.        .. ..-|+|++.  + .+++|+.+. .+.+. .+|.
T Consensus       233 DVA~AHv~a~E~~--------~a-~GRyic~~~--~-~~~~ei~~~l~~~~P-~~~i  276 (327)
T KOG1502|consen  233 DVALAHVLALEKP--------SA-KGRYICVGE--V-VSIKEIADILRELFP-DYPI  276 (327)
T ss_pred             HHHHHHHHHHcCc--------cc-CceEEEecC--c-ccHHHHHHHHHHhCC-CCCC
Confidence            9999 77776322        22 458999886  3 349999999 87766 6663

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.57  E-value=0.00016  Score=69.57  Aligned_cols=105  Identities=10%  Similarity=0.062  Sum_probs=72.0

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCc-ccceecccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNT-VTDMVPSTV   85 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~-~~diVPVD~   85 (300)
                      +.|..+|..+|+.+.++..+++++|+||+.+.+.    +++          .+.....|..-.+.++++. ..+.|.||+
T Consensus       190 ~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~----~~~----------~~~~~~~g~~~~~~GdG~~~~~~~I~v~D  255 (390)
T PLN02657        190 LEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKS----LGG----------QVEIVKDGGPYVMFGDGKLCACKPISEAD  255 (390)
T ss_pred             hHHHHHHHHHHHHHHhccCCCCEEEEccHHHhcc----cHH----------HHHhhccCCceEEecCCcccccCceeHHH
Confidence            4688999999999876557999999999987752    211          1222223433335566654 346799999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++. ++.++.+.    .   .. ..+||+.++ ..++|++|+.+. .+..+
T Consensus       256 lA~~i~~~~~~~----~---~~-~~~~~Iggp-~~~~S~~Eia~~l~~~lG  297 (390)
T PLN02657        256 LASFIADCVLDE----S---KI-NKVLPIGGP-GKALTPLEQGEMLFRILG  297 (390)
T ss_pred             HHHHHHHHHhCc----c---cc-CCEEEcCCC-CcccCHHHHHHHHHHHhC
Confidence            998 66655321    1   23 579999863 247899999999 88777

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.55  E-value=0.00017  Score=66.21  Aligned_cols=114  Identities=17%  Similarity=0.087  Sum_probs=86.0

Q ss_pred             cHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      ++|.-|||-|.+||+.+..  +||++|.|+|--+|+.+.|=     .+ -| -++.-+-.|.--.++|++..+=|-+.|+
T Consensus       150 SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-----Kl-IP-~~I~nal~g~~lpvYGdG~~iRDWl~Ve  222 (340)
T COG1088         150 SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-----KL-IP-LMIINALLGKPLPVYGDGLQIRDWLYVE  222 (340)
T ss_pred             CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-----hh-hH-HHHHHHHcCCCCceecCCcceeeeEEeH
Confidence            6799999999999999854  99999999999999998762     00 01 1223345577668999999999999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP  138 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P  138 (300)
                      .-++ +-... ..+       .- +.+||+.++  |..+--|+.+. .+...+..|
T Consensus       223 Dh~~ai~~Vl-~kg-------~~-GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         223 DHCRAIDLVL-TKG-------KI-GETYNIGGG--NERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             hHHHHHHHHH-hcC-------cC-CceEEeCCC--ccchHHHHHHHHHHHhCcccc
Confidence            9998 43322 222       23 679999988  77899999999 777773444

>PLN02778 3,5-epimerase/4-reductase

Probab=97.38  E-value=0.0005  Score=63.64  Aligned_cols=98  Identities=19%  Similarity=0.161  Sum_probs=63.1

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      |.|+.||.++|+++..+.   ...++|++++.+...          ..+..++..+..|--....+     .|.+.||.+
T Consensus       139 s~Yg~sK~~~E~~~~~y~---~~~~lr~~~~~~~~~----------~~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~  200 (298)
T PLN02778        139 SFYSKTKAMVEELLKNYE---NVCTLRVRMPISSDL----------SNPRNFITKITRYEKVVNIP-----NSMTILDEL  200 (298)
T ss_pred             CchHHHHHHHHHHHHHhh---ccEEeeecccCCccc----------ccHHHHHHHHHcCCCeeEcC-----CCCEEHHHH
Confidence            789999999999998875   467899977554311          01112222222221101111     268888999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ ++.+.. .        +. ..+||++++  .++|+.|+.+. .+...
T Consensus       201 v~al~~~l~-~--------~~-~g~yNigs~--~~iS~~el~~~i~~~~~  238 (298)
T PLN02778        201 LPISIEMAK-R--------NL-TGIYNFTNP--GVVSHNEILEMYRDYID  238 (298)
T ss_pred             HHHHHHHHh-C--------CC-CCeEEeCCC--CcccHHHHHHHHHHHhC
Confidence            98 665541 1        12 359999887  68999999998 87766

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=97.38  E-value=0.00028  Score=64.72  Aligned_cols=103  Identities=15%  Similarity=0.157  Sum_probs=71.6

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHH-HhhcceeeeccCCCcccceecccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG-IATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~-~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      |-|+.||.++|+.|.++.  =-..|+|.|+|++.....|          ...|+- ...|.  .+.+-.|....-+++..
T Consensus       122 nvYG~sKl~GE~~v~~~~--~~~~I~Rtswv~g~~g~nF----------v~tml~la~~~~--~l~vv~Dq~gsPt~~~d  187 (281)
T COG1091         122 NVYGRSKLAGEEAVRAAG--PRHLILRTSWVYGEYGNNF----------VKTMLRLAKEGK--ELKVVDDQYGSPTYTED  187 (281)
T ss_pred             hhhhHHHHHHHHHHHHhC--CCEEEEEeeeeecCCCCCH----------HHHHHHHhhcCC--ceEEECCeeeCCccHHH
Confidence            679999999999999875  3468999999999765222          222222 22332  22333567777788888


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++. +...+...        .. ..+||++++  ..+||-|+.+. .+..+
T Consensus       188 lA~~i~~ll~~~--------~~-~~~yH~~~~--g~~Swydfa~~I~~~~~  227 (281)
T COG1091         188 LADAILELLEKE--------KE-GGVYHLVNS--GECSWYEFAKAIFEEAG  227 (281)
T ss_pred             HHHHHHHHHhcc--------cc-CcEEEEeCC--CcccHHHHHHHHHHHhC
Confidence            888 65554211        22 459999998  66899999999 77665

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=97.33  E-value=0.0006  Score=63.75  Aligned_cols=103  Identities=15%  Similarity=0.107  Sum_probs=67.7

Q ss_pred             cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeeccCCCccccccCCCChHHHHH-HHhhcceeeeccCCCcccce
Q psy3027           7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV-GIATGVLHTHLINLNTVTDM   80 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~-~~~~G~l~~~~~~~~~~~di   80 (300)
                      +.|+.||+.+|+++...     ..+++++++||+.|.|+..        +   ....+. ....|.-....++++..-|+
T Consensus       133 ~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~--------~---~i~~~~~~~~~~~~~~~i~~~~~~r~~  201 (324)
T TIGR03589       133 NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG--------S---VVPFFKSLKEEGVTELPITDPRMTRFW  201 (324)
T ss_pred             CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC--------C---cHHHHHHHHHhCCCCeeeCCCCceEee
Confidence            67999999999999663     3489999999999998421        1   122222 22234211112255666789


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV  132 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~  132 (300)
                      +.||.+|+ ++.++.. .       .. ..+|+ .++  ...+..|+.+. .+.
T Consensus       202 i~v~D~a~a~~~al~~-~-------~~-~~~~~-~~~--~~~sv~el~~~i~~~  243 (324)
T TIGR03589       202 ITLEQGVNFVLKSLER-M-------LG-GEIFV-PKI--PSMKITDLAEAMAPE  243 (324)
T ss_pred             EEHHHHHHHHHHHHhh-C-------CC-CCEEc-cCC--CcEEHHHHHHHHHhh
Confidence            99999999 7666532 1       12 45784 444  45899999988 654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK05865 hypothetical protein; Provisional

Probab=97.10  E-value=0.0013  Score=69.12  Aligned_cols=93  Identities=14%  Similarity=0.192  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-ccc
Q psy3027          13 KALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-PSE   91 (300)
Q Consensus        13 K~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i~   91 (300)
                      |..+|+++.+  .++|++|+||+.|+|...   +.|+..+           .+......++.+...|+|.||++++ ++.
T Consensus       106 K~aaE~ll~~--~gl~~vILRp~~VYGP~~---~~~i~~l-----------l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~  169 (854)
T PRK05865        106 QPRVEQMLAD--CGLEWVAVRCALIFGRNV---DNWVQRL-----------FALPVLPAGYADRVVQVVHSDDAQRLLVR  169 (854)
T ss_pred             HHHHHHHHHH--cCCCEEEEEeceEeCCCh---HHHHHHH-----------hcCceeccCCCCceEeeeeHHHHHHHHHH
Confidence            9999999965  489999999999998531   2222211           1111112244566679999999999 665


Q ss_pred             ccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HH
Q psy3027          92 GVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-AT  131 (300)
Q Consensus        92 aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~  131 (300)
                      ++....       .. ..+||++++  +++|+.|+.+. .+
T Consensus       170 aL~~~~-------~~-ggvyNIgsg--~~~Si~EIae~l~~  200 (854)
T PRK05865        170 ALLDTV-------ID-SGPVNLAAP--GELTFRRIAAALGR  200 (854)
T ss_pred             HHhCCC-------cC-CCeEEEECC--CcccHHHHHHHHhh
Confidence            542111       12 469999998  78999999998 54

>KOG2865|consensus

Probab=96.56  E-value=0.0047  Score=56.61  Aligned_cols=111  Identities=20%  Similarity=0.174  Sum_probs=70.8

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      |.-|-.||+++|..|+++..+  .+|+|||-|+|+.+-        +-.+...++-- .|.+.......+..=--|.|-+
T Consensus       185 ~Sr~LrsK~~gE~aVrdafPe--AtIirPa~iyG~eDr--------fln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~D  253 (391)
T KOG2865|consen  185 PSRMLRSKAAGEEAVRDAFPE--ATIIRPADIYGTEDR--------FLNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVD  253 (391)
T ss_pred             hHHHHHhhhhhHHHHHhhCCc--ceeechhhhcccchh--------HHHHHHHHHHh-cCceeeecCCcceeeccEEEeh
Confidence            567889999999999997543  589999999998762        22222222211 2333322221122223456666


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP  138 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P  138 (300)
                      |+. |+.|+-+. .      .. +.+|..+.+  .-.+..|+.+. .+-.+ +.|
T Consensus       254 Vaa~IvnAvkDp-~------s~-Gktye~vGP--~~yql~eLvd~my~~~~-~~~  297 (391)
T KOG2865|consen  254 VAAAIVNAVKDP-D------SM-GKTYEFVGP--DRYQLSELVDIMYDMAR-EWP  297 (391)
T ss_pred             HHHHHHHhccCc-c------cc-CceeeecCC--chhhHHHHHHHHHHHHh-hcc
Confidence            666 76665322 1      34 789999987  66899999999 77766 655

>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional

Probab=96.43  E-value=0.0054  Score=64.48  Aligned_cols=76  Identities=12%  Similarity=0.124  Sum_probs=52.8

Q ss_pred             HHHHHhhcceeeeccCCCcccceeccccccc--cccccccccCCCCC-CCCCCCcEEEeeCCCCCcccHhHHHHH-HHHc
Q psy3027          58 MLVGIATGVLHTHLINLNTVTDMVPSTVSDG--PSEGVWQKKFPTSV-FRPDPIPIYNFVGSARNPISWGKLDEL-ATVC  133 (300)
Q Consensus        58 ~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn--~i~aa~~~~~~~~~-~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~  133 (300)
                      +.++..+|.++.+|..-...+-++|+|...|  +++-.+.....-.+ .... ...--|+++.+|.+-|+-+.++ +.|.
T Consensus       236 ~~~~~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vwgm~~~ylm~yy  314 (1108)
T PTZ00374        236 VCLGVALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHGGLAECVECA-AEMQLCGAPGDNSLVWGMVAEYLMDYY  314 (1108)
T ss_pred             HHHHHhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcCChHHHhcch-hhheeccCCccceeeHHHHHHHHHHHH
Confidence            4567788999999988888889999999999  55555432210000 0011 1234467778899999999999 8887


Q ss_pred             C
Q psy3027         134 H  134 (300)
Q Consensus       134 ~  134 (300)
                      +
T Consensus       315 ~  315 (1108)
T PTZ00374        315 G  315 (1108)
T ss_pred             h
Confidence            6

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=95.91  E-value=0.018  Score=59.12  Aligned_cols=97  Identities=20%  Similarity=0.168  Sum_probs=57.8

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      |.|+.||..+|+++.++.   ...++|++++.+....   |       +..++..+.++.. .+.. +   .+..-+|.+
T Consensus       510 ~~Yg~sK~~~E~~~~~~~---~~~~~r~~~~~~~~~~---~-------~~nfv~~~~~~~~-~~~v-p---~~~~~~~~~  571 (668)
T PLN02260        510 SFYSKTKAMVEELLREYD---NVCTLRVRMPISSDLS---N-------PRNFITKISRYNK-VVNI-P---NSMTVLDEL  571 (668)
T ss_pred             ChhhHHHHHHHHHHHhhh---hheEEEEEEecccCCC---C-------ccHHHHHHhccce-eecc-C---CCceehhhH
Confidence            889999999999998863   5788899988853211   1       1122222211111 1111 1   123344555


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHc
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVC  133 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~  133 (300)
                      +. ++.++ +.        .. ..+||++++  .++||.|+.+. .+..
T Consensus       572 ~~~~~~l~-~~--------~~-~giyni~~~--~~~s~~e~a~~i~~~~  608 (668)
T PLN02260        572 LPISIEMA-KR--------NL-RGIWNFTNP--GVVSHNEILEMYKDYI  608 (668)
T ss_pred             HHHHHHHH-Hh--------CC-CceEEecCC--CcCcHHHHHHHHHHhc
Confidence            55 33333 11        12 469999998  68999999998 7654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.02  E-value=0.052  Score=49.36  Aligned_cols=99  Identities=13%  Similarity=0.177  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-cc
Q psy3027          12 TKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-PS   90 (300)
Q Consensus        12 TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i   90 (300)
                      .+...|+.+.+. .++|.+|+||+.++.....+.  +...+         ...|.+  ..+.++...+.|.++.++. +.
T Consensus       114 ~~~~~~~~l~~~-~gi~~tilRp~~f~~~~~~~~--~~~~~---------~~~~~~--~~~~g~~~~~~v~~~Dva~~~~  179 (285)
T TIGR03649       114 AMGQVHAHLDSL-GGVEYTVLRPTWFMENFSEEF--HVEAI---------RKENKI--YSATGDGKIPFVSADDIARVAY  179 (285)
T ss_pred             hHHHHHHHHHhc-cCCCEEEEeccHHhhhhcccc--ccccc---------ccCCeE--EecCCCCccCcccHHHHHHHHH
Confidence            445556666542 489999999997764321110  00000         012332  2335677889999999999 55


Q ss_pred             cccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          91 EGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        91 ~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+..+ .   .   .. ..+|+++++  .++|+.|+.+. .+..+
T Consensus       180 ~~l~~-~---~---~~-~~~~~l~g~--~~~s~~eia~~l~~~~g  214 (285)
T TIGR03649       180 RALTD-K---V---AP-NTDYVVLGP--ELLTYDDVAEILSRVLG  214 (285)
T ss_pred             HHhcC-C---C---cC-CCeEEeeCC--ccCCHHHHHHHHHHHhC
Confidence            54422 1   1   23 569999987  78999999999 87776

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.71  E-value=0.078  Score=47.39  Aligned_cols=87  Identities=16%  Similarity=0.177  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-c
Q psy3027          11 FTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-P   89 (300)
Q Consensus        11 ~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~   89 (300)
                      .+|..+|+.+++  .+++++|+||+.+.+...   .|                  .....+. .......|..++|++ +
T Consensus       159 ~~k~~~e~~l~~--~gi~~~iirpg~~~~~~~---~~------------------~~~~~~~-~~~~~~~i~~~dvA~~~  214 (251)
T PLN00141        159 VAKLQAEKYIRK--SGINYTIVRPGGLTNDPP---TG------------------NIVMEPE-DTLYEGSISRDQVAEVA  214 (251)
T ss_pred             HHHHHHHHHHHh--cCCcEEEEECCCccCCCC---Cc------------------eEEECCC-CccccCcccHHHHHHHH
Confidence            468888888765  479999999998875321   11                  1111111 111124588999999 6


Q ss_pred             ccccccccCCCCCCCCCCCcEEEeeCCCCCc-ccHhHHHHH
Q psy3027          90 SEGVWQKKFPTSVFRPDPIPIYNFVGSARNP-ISWGKLDEL  129 (300)
Q Consensus        90 i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np-~t~~~~~~~  129 (300)
                      ..++....       .. ..++.+++...++ .|++++...
T Consensus       215 ~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~  247 (251)
T PLN00141        215 VEALLCPE-------SS-YKVVEIVARADAPKRSYKDLFAS  247 (251)
T ss_pred             HHHhcChh-------hc-CcEEEEecCCCCCchhHHHHHHH
Confidence            66553211       23 5689999877776 889888765

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=94.55  E-value=0.11  Score=47.61  Aligned_cols=87  Identities=15%  Similarity=0.110  Sum_probs=61.7

Q ss_pred             CCCCEEEecccEEeeccCCCccccccCCCChHHHHH-HHhhcceeeeccCCCcccceeccccccc-cccccccccCCCCC
Q psy3027          25 KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV-GIATGVLHTHLINLNTVTDMVPSTVSDG-PSEGVWQKKFPTSV  102 (300)
Q Consensus        25 ~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~-~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~  102 (300)
                      .+..+++.|-|+|.++..           |+.+-+. .+..|+- --.|+++.-..-|.+|++|| ++-+..+.      
T Consensus       151 ~gtRvvllRtGvVLs~~G-----------GaL~~m~~~fk~glG-G~~GsGrQ~~SWIhieD~v~~I~fll~~~------  212 (297)
T COG1090         151 LGTRVVLLRTGVVLSPDG-----------GALGKMLPLFKLGLG-GKLGSGRQWFSWIHIEDLVNAILFLLENE------  212 (297)
T ss_pred             cCceEEEEEEEEEecCCC-----------cchhhhcchhhhccC-CccCCCCceeeeeeHHHHHHHHHHHHhCc------
Confidence            488999999999998543           2222222 2222221 13467888899999999999 76665321      


Q ss_pred             CCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027         103 FRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus       103 ~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                        .. ...||+|++  ||++..++.+. .+..+
T Consensus       213 --~l-sGp~N~taP--~PV~~~~F~~al~r~l~  240 (297)
T COG1090         213 --QL-SGPFNLTAP--NPVRNKEFAHALGRALH  240 (297)
T ss_pred             --CC-CCcccccCC--CcCcHHHHHHHHHHHhC
Confidence              12 358999998  99999999999 77766

>PRK12320 hypothetical protein; Provisional

Probab=94.07  E-value=0.096  Score=54.17  Aligned_cols=89  Identities=11%  Similarity=-0.022  Sum_probs=58.3

Q ss_pred             HHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-ccccc
Q psy3027          15 LAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-PSEGV   93 (300)
Q Consensus        15 ~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~i~aa   93 (300)
                      .+|+++.+  .++|++|+||+.|+|....+.      .   ..++.......+      .+..+.+|.||++++ ++.++
T Consensus       112 ~aE~ll~~--~~~p~~ILR~~nVYGp~~~~~------~---~r~I~~~l~~~~------~~~pI~vIyVdDvv~alv~al  174 (699)
T PRK12320        112 QAETLVST--GWAPSLVIRIAPPVGRQLDWM------V---CRTVATLLRSKV------SARPIRVLHLDDLVRFLVLAL  174 (699)
T ss_pred             HHHHHHHh--cCCCEEEEeCceecCCCCccc------H---hHHHHHHHHHHH------cCCceEEEEHHHHHHHHHHHH
Confidence            58988865  359999999999999643221      0   012221111111      133456799999999 76665


Q ss_pred             ccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027          94 WQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV  132 (300)
Q Consensus        94 ~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~  132 (300)
                      . ..       .  ..+||++++  +.+|+.|+.+. ...
T Consensus       175 ~-~~-------~--~GiyNIG~~--~~~Si~el~~~i~~~  202 (699)
T PRK12320        175 N-TD-------R--NGVVDLATP--DTTNVVTAWRLLRSV  202 (699)
T ss_pred             h-CC-------C--CCEEEEeCC--CeeEHHHHHHHHHHh
Confidence            2 11       2  349999999  78999999888 654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=93.17  E-value=0.1  Score=43.92  Aligned_cols=63  Identities=19%  Similarity=0.177  Sum_probs=45.3

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.|...|..+|+++.+  .+++.+|+|||.+++...++..                      .+....+...+.|.++.|
T Consensus       118 ~~~~~~~~~~e~~~~~--~~~~~~ivrp~~~~~~~~~~~~----------------------~~~~~~~~~~~~i~~~Dv  173 (183)
T PF13460_consen  118 PEYARDKREAEEALRE--SGLNWTIVRPGWIYGNPSRSYR----------------------LIKEGGPQGVNFISREDV  173 (183)
T ss_dssp             HHHHHHHHHHHHHHHH--STSEEEEEEESEEEBTTSSSEE----------------------EESSTSTTSHCEEEHHHH
T ss_pred             hhhHHHHHHHHHHHHh--cCCCEEEEECcEeEeCCCccee----------------------EEeccCCCCcCcCCHHHH
Confidence            4789999999999975  4999999999999987543110                      111133445588999999


Q ss_pred             cc-ccccc
Q psy3027          87 DG-PSEGV   93 (300)
Q Consensus        87 vn-~i~aa   93 (300)
                      +. ++.++
T Consensus       174 A~~~~~~l  181 (183)
T PF13460_consen  174 AKAIVEAL  181 (183)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            88 65543

...

>KOG1371|consensus

Probab=93.10  E-value=0.27  Score=46.03  Aligned_cols=125  Identities=15%  Similarity=0.053  Sum_probs=78.3

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccC-----CCccccccCCCChHHHHHHHhhcceeeecc------C
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYR-----EPVRGWIDNVYGPIGMLVGIATGVLHTHLI------N   73 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~-----eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~------~   73 (300)
                      |.|+.||...|++.....  ..+-++++|-.-++|+.-     |+.+|--.|+.. .+.=.++++.--....+      +
T Consensus       151 ~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t~d  229 (343)
T KOG1371|consen  151 NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTTID  229 (343)
T ss_pred             CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccccC
Confidence            789999999999999883  368889999887777332     333555555542 22222333322222333      3


Q ss_pred             CCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCcc
Q psy3027          74 LNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTI  140 (300)
Q Consensus        74 ~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~  140 (300)
                      ++.+-|-|.|=..+. .+.|+.+...  .   .+ ..|||+.++  ++.+..++.+. .+..+.+.|..
T Consensus       230 gt~vrdyi~v~Dla~~h~~al~k~~~--~---~~-~~i~Nlgtg--~g~~V~~lv~a~~k~~g~~~k~~  290 (343)
T KOG1371|consen  230 GTIVRDYIHVLDLADGHVAALGKLRG--A---AE-FGVYNLGTG--KGSSVLELVTAFEKALGVKIKKK  290 (343)
T ss_pred             CCeeecceeeEehHHHHHHHhhcccc--c---hh-eeeEeecCC--CCccHHHHHHHHHHHhcCCCCcc
Confidence            455556676666677 5555543322  1   34 569999998  88889999999 65544355543

>PRK09135 pteridine reductase; Provisional

Probab=93.03  E-value=0.18  Score=44.28  Aligned_cols=36  Identities=17%  Similarity=0.138  Sum_probs=30.4

Q ss_pred             cHHHHHHHHHHHHHHHhc----CCCCEEEecccEEeeccC
Q psy3027           7 NTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVSTYR   42 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~~~~   42 (300)
                      +.|+.||+.+|.+++...    .+++++++||+.|.+...
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~  193 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED  193 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence            689999999999997752    369999999999987654

>KOG1429|consensus

Probab=92.54  E-value=0.4  Score=44.20  Aligned_cols=111  Identities=12%  Similarity=-0.032  Sum_probs=79.9

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      ..|..-|..||.|+..+.  .++-+.|.|+=-.+|..-    -|.|+- -..-+....-++---++++++...=.+..||
T Consensus       168 ~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm----~~~dgr-vvsnf~~q~lr~epltv~g~G~qtRSF~yvs  242 (350)
T KOG1429|consen  168 SCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM----HMDDGR-VVSNFIAQALRGEPLTVYGDGKQTRSFQYVS  242 (350)
T ss_pred             hhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc----ccCCCh-hhHHHHHHHhcCCCeEEEcCCcceEEEEeHH
Confidence            468999999999999984  489999999998888543    244411 1112233333444446889998888999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+|+ ++..+...        .. .+ +|+.++  +..|..|+.++ .+...
T Consensus       243 D~Vegll~Lm~s~--------~~-~p-vNiGnp--~e~Tm~elAemv~~~~~  282 (350)
T KOG1429|consen  243 DLVEGLLRLMESD--------YR-GP-VNIGNP--GEFTMLELAEMVKELIG  282 (350)
T ss_pred             HHHHHHHHHhcCC--------Cc-CC-cccCCc--cceeHHHHHHHHHHHcC
Confidence            9999 88776311        11 22 788887  78999999999 77654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=92.19  E-value=0.15  Score=47.28  Aligned_cols=107  Identities=12%  Similarity=0.062  Sum_probs=69.9

Q ss_pred             CcHHHHHHHHHHHHHHHhcC-----CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027           6 PNTYTFTKALAEDVLCKEGK-----GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM   80 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~-----~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di   80 (300)
                      -|.|+.||.+||+++..+..     +-..++||-+-|.++...-+|.|.+.+.          .|---+ .-+++..==+
T Consensus       135 tnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~----------~g~PlT-vT~p~mtRff  203 (293)
T PF02719_consen  135 TNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIK----------NGGPLT-VTDPDMTRFF  203 (293)
T ss_dssp             -SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHH----------TTSSEE-ECETT-EEEE
T ss_pred             CcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHH----------cCCcce-eCCCCcEEEE
Confidence            48999999999999998844     4699999999999998888887765442          232111 2244544446


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +=++-.++ ++.|+. .+.       . +.||-.-.+  .|++..|+.+. .+..+
T Consensus       204 mti~EAv~Lvl~a~~-~~~-------~-geifvl~mg--~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  204 MTIEEAVQLVLQAAA-LAK-------G-GEIFVLDMG--EPVKILDLAEAMIELSG  248 (293)
T ss_dssp             E-HHHHHHHHHHHHH-H---------T-TEEEEE-----TCEECCCHHHHHHHHTT
T ss_pred             ecHHHHHHHHHHHHh-hCC-------C-CcEEEecCC--CCcCHHHHHHHHHhhcc
Confidence            67777788 665553 221       2 568877776  78999999998 76655

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=91.85  E-value=0.23  Score=43.73  Aligned_cols=110  Identities=15%  Similarity=0.127  Sum_probs=66.0

Q ss_pred             CCCcH-HHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee-
Q psy3027           4 EWPNT-YTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV-   81 (300)
Q Consensus         4 ~~pNt-Yt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV-   81 (300)
                      .+|.. .-..|...|+.+++.  ++|.+|+||++-+...-.++.++.+--.          .+..-.++++.+.....+ 
T Consensus       113 ~~p~~~~~~~k~~ie~~l~~~--~i~~t~i~~g~f~e~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  180 (233)
T PF05368_consen  113 SEPEIPHFDQKAEIEEYLRES--GIPYTIIRPGFFMENLLPPFAPVVDIKK----------SKDVVTLPGPGNQKAVPVT  180 (233)
T ss_dssp             STTHHHHHHHHHHHHHHHHHC--TSEBEEEEE-EEHHHHHTTTHHTTCSCC----------TSSEEEEETTSTSEEEEEE
T ss_pred             ccccchhhhhhhhhhhhhhhc--cccceeccccchhhhhhhhhcccccccc----------cceEEEEccCCCccccccc
Confidence            34543 334789999998775  9999999999877655444433222111          011123555556555554 


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ..+++++ ...+..+... .    .. ...+++++   ..+|++|+.+. .+..+
T Consensus       181 ~~~Dvg~~va~il~~p~~-~----~~-~~~~~~~~---~~~t~~eia~~~s~~~G  226 (233)
T PF05368_consen  181 DTRDVGRAVAAILLDPEK-H----NN-GKTIFLAG---ETLTYNEIAAILSKVLG  226 (233)
T ss_dssp             HHHHHHHHHHHHHHSGGG-T----TE-EEEEEEGG---GEEEHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHcChHH-h----cC-CEEEEeCC---CCCCHHHHHHHHHHHHC
Confidence            7788888 5444432111 1    13 46777755   46899999999 77666

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG4288|consensus

Probab=91.70  E-value=0.16  Score=45.45  Aligned_cols=86  Identities=20%  Similarity=0.068  Sum_probs=55.8

Q ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcc---eeeeccCCCccccee
Q psy3027           5 WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGV---LHTHLINLNTVTDMV   81 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~---l~~~~~~~~~~~diV   81 (300)
                      -|..|-.+|..||.-+.+..+ ..=.|+||+.++++  .++.|=--.+......+-..-++.   ++.++.-+.....-|
T Consensus       171 i~rGY~~gKR~AE~Ell~~~~-~rgiilRPGFiyg~--R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppv  247 (283)
T KOG4288|consen  171 IPRGYIEGKREAEAELLKKFR-FRGIILRPGFIYGT--RNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPV  247 (283)
T ss_pred             cchhhhccchHHHHHHHHhcC-CCceeeccceeecc--cccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCc
Confidence            366899999999999887654 77789999999998  344442222222222222223333   344555566667778


Q ss_pred             ccccccc-ccccc
Q psy3027          82 PSTVSDG-PSEGV   93 (300)
Q Consensus        82 PVD~vvn-~i~aa   93 (300)
                      +||-|+- .+-|+
T Consensus       248 nve~VA~aal~ai  260 (283)
T KOG4288|consen  248 NVESVALAALKAI  260 (283)
T ss_pred             CHHHHHHHHHHhc
Confidence            9999988 55554

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=91.30  E-value=0.95  Score=45.43  Aligned_cols=113  Identities=14%  Similarity=0.090  Sum_probs=77.2

Q ss_pred             CcHHHHHHHHHHHHHHHhcC-----CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027           6 PNTYTFTKALAEDVLCKEGK-----GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM   80 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~-----~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di   80 (300)
                      .|.|+-||.+||.++..+.+     +--.+.||-+-|.|+...-+|=+.+-          +..|- ..-.-+++..==+
T Consensus       383 tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~Q----------I~~Gg-plTvTdp~mtRyf  451 (588)
T COG1086         383 TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQ----------IAEGG-PLTVTDPDMTRFF  451 (588)
T ss_pred             chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHH----------HHcCC-CccccCCCceeEE
Confidence            59999999999999988744     36789999999999887655533322          22231 1112244444345


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCCccc
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWPTIR  141 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P~~~  141 (300)
                      .=++-.|+ ++.|+.. +       .. +.||=.-.|  .|++..|+.+. .+..+ .+|..+
T Consensus       452 MTI~EAv~LVlqA~a~-~-------~g-GeifvldMG--epvkI~dLAk~mi~l~g-~~~~~d  502 (588)
T COG1086         452 MTIPEAVQLVLQAGAI-A-------KG-GEIFVLDMG--EPVKIIDLAKAMIELAG-QTPPGD  502 (588)
T ss_pred             EEHHHHHHHHHHHHhh-c-------CC-CcEEEEcCC--CCeEHHHHHHHHHHHhC-CCCCCC
Confidence            55666677 6666532 2       23 568888777  79999999999 88887 777653

>PRK06482 short chain dehydrogenase; Provisional

Probab=91.05  E-value=0.41  Score=43.08  Aligned_cols=33  Identities=18%  Similarity=0.214  Sum_probs=27.5

Q ss_pred             cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027           7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS   39 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~   39 (300)
                      +.|+.||+..|.+++...     .+++++++||+.+..
T Consensus       146 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t  183 (276)
T PRK06482        146 SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPART  183 (276)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccc
Confidence            689999999998887652     489999999998743

>PRK12829 short chain dehydrogenase; Provisional

Probab=86.29  E-value=0.43  Score=42.31  Aligned_cols=35  Identities=11%  Similarity=0.201  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC
Q psy3027           8 TYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR   42 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~   42 (300)
                      .|+.+|+..|.++....     .+++++++||+.|.+...
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence            49999999998887652     489999999999876543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=86.02  E-value=0.75  Score=40.48  Aligned_cols=97  Identities=8%  Similarity=-0.006  Sum_probs=52.8

Q ss_pred             cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC-CCccccccCCCChHHHHHHHhhcceeeeccCCCcccce
Q psy3027           7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR-EPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDM   80 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~-eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~di   80 (300)
                      +.|+.||+.+|.+++...     .+++++++||+.|.+... +.++.-............   .+.    ........+.
T Consensus       148 ~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~  220 (255)
T TIGR01963       148 SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVI---REV----MLPGQPTKRF  220 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHH---HHH----HHccCccccC
Confidence            679999999898886542     389999999998875431 111110000000000000   000    0112233468


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGS  116 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~  116 (300)
                      +.+|.+++ ++.++.+...  .   .. ..+|++.++
T Consensus       221 ~~~~d~a~~~~~~~~~~~~--~---~~-g~~~~~~~g  251 (255)
T TIGR01963       221 VTVDEVAETALFLASDAAA--G---IT-GQAIVLDGG  251 (255)
T ss_pred             cCHHHHHHHHHHHcCcccc--C---cc-ceEEEEcCc
Confidence            99999999 7766643221  1   23 568888754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05875 short chain dehydrogenase; Provisional

Probab=84.94  E-value=1.2  Score=39.95  Aligned_cols=35  Identities=20%  Similarity=0.435  Sum_probs=28.6

Q ss_pred             CCcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027           5 WPNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS   39 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~   39 (300)
                      ..+.|+-||+..|.+++...     .++.++++||+.|..
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t  194 (276)
T PRK05875        155 WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRT  194 (276)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCC
Confidence            34679999999999998752     478999999997754

>PRK06914 short chain dehydrogenase; Provisional

Probab=84.79  E-value=0.5  Score=42.53  Aligned_cols=36  Identities=17%  Similarity=0.177  Sum_probs=29.0

Q ss_pred             CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeecc
Q psy3027           6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTY   41 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~   41 (300)
                      .+.|+-||+..|.+++..+     .+++++++||+.+....
T Consensus       150 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (280)
T PRK06914        150 LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI  190 (280)
T ss_pred             CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence            3579999999999887642     38999999999886643

>PRK12746 short chain dehydrogenase; Provisional

Probab=81.09  E-value=0.99  Score=39.84  Aligned_cols=35  Identities=11%  Similarity=0.241  Sum_probs=27.9

Q ss_pred             cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027           7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY   41 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~   41 (300)
                      ..|+.||+..|.+++..     ..++++++++|+.|.+..
T Consensus       158 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  197 (254)
T PRK12746        158 IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI  197 (254)
T ss_pred             cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence            46999999999987654     247999999999886543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=80.79  E-value=0.65  Score=41.14  Aligned_cols=96  Identities=4%  Similarity=-0.125  Sum_probs=53.9

Q ss_pred             cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC-CCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccc
Q psy3027           7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR-EPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTD   79 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~-eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~d   79 (300)
                      +.|.-||+..|.+++...     .++.++++||+.|.+... +.++........ ....        .+.+........+
T Consensus       155 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~  226 (262)
T PRK13394        155 SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEV--------VKKVMLGKTVDGV  226 (262)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHH--------HHHHHhcCCCCCC
Confidence            579999999888876552     479999999998876432 111111111100 0000        1111122333457


Q ss_pred             eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027          80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGS  116 (300)
Q Consensus        80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~  116 (300)
                      ++.++.+++ ++.++.....  .   .. +.+|++..+
T Consensus       227 ~~~~~dva~a~~~l~~~~~~--~---~~-g~~~~~~~g  258 (262)
T PRK13394        227 FTTVEDVAQTVLFLSSFPSA--A---LT-GQSFVVSHG  258 (262)
T ss_pred             CCCHHHHHHHHHHHcCcccc--C---Cc-CCEEeeCCc
Confidence            899999999 7766533221  1   23 467777654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=80.10  E-value=1  Score=39.91  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=28.4

Q ss_pred             cHHHHHHHHHHHHHHHh-----cCCCCEEEecccEEeecc
Q psy3027           7 NTYTFTKALAEDVLCKE-----GKGLPLAVLRPAVIVSTY   41 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~-----~~~lPv~IvRPsiV~~~~   41 (300)
                      ..|+.||+..|.+++..     ..++++.++||+.|.+..
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  190 (257)
T PRK07067        151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM  190 (257)
T ss_pred             chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence            57999999988887654     348999999999987643

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=80.04  E-value=8.9  Score=33.88  Aligned_cols=103  Identities=15%  Similarity=0.106  Sum_probs=64.7

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      |..|..+|..+|+++.+  .++|.+++||+..+.....           .. .......|......  +..+...|.+|.
T Consensus       115 ~~~~~~~~~~~e~~l~~--sg~~~t~lr~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~--~~~~~~~i~~~d  178 (275)
T COG0702         115 PSALARAKAAVEAALRS--SGIPYTTLRRAAFYLGAGA-----------AF-IEAAEAAGLPVIPR--GIGRLSPIAVDD  178 (275)
T ss_pred             ccHHHHHHHHHHHHHHh--cCCCeEEEecCeeeeccch-----------hH-HHHHHhhCCceecC--CCCceeeeEHHH
Confidence            56799999999999987  5899999997655442221           00 22223333322222  223677888999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++. +..+.....       .. ..+|.++..  ...+..+..+. .+...
T Consensus       179 ~a~~~~~~l~~~~-------~~-~~~~~l~g~--~~~~~~~~~~~l~~~~g  219 (275)
T COG0702         179 VAEALAAALDAPA-------TA-GRTYELAGP--EALTLAELASGLDYTIG  219 (275)
T ss_pred             HHHHHHHHhcCCc-------cc-CcEEEccCC--ceecHHHHHHHHHHHhC
Confidence            888 444332111       23 579999876  66888888888 55544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	300
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-08

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 53.8 bits (129), Expect = 2e-08
 Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 18/148 (12%)

Query: 1   LLHEWPNTYTFTKALAEDVLCK--EGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGM 58
           +   W   Y  +K   E +L +  +   LP+AV R  +I++      +  + +      M
Sbjct: 241 VDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVT--RM 298

Query: 59  LVG-IATGVL-------HTHLINLNTVTDMVP-STVSDGPSEGVWQKKFPTSVFRPDPIP 109
           ++  +ATG+         +         D +P + V++  +    +     +        
Sbjct: 299 VLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGAR----VAGSSLAGFA 354

Query: 110 IYNFVGSARNPISWGKL-DELATVCHPI 136
            Y+ +    + I   +  D L    +PI
Sbjct: 355 TYHVMNPHDDGIGLDEYVDWLIEAGYPI 382

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	300
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.1
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.89
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.88
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.88
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.85
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.81
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.81
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.8
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.78
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.78
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.76
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.72
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.72
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.72
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.7
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.69
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.68
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.66
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.66
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.63
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.6
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.59
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.59
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.58
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.58
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.58
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.57
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.56
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.55
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.55
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.53
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.53
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.53
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.51
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.49
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.49
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.47
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.43
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	98.42
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.39
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.38
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.37
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.36
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.33
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.3
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.28
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.28
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.26
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.25
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.24
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.23
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.22
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.19
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.18
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.17
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.12
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.09
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	98.08
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.07
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.07
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.05
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.03
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.98
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.87
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.84
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.8
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.7
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.68
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.67
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	97.67
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.61
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.54
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	97.52
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	97.52
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.47
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.33
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.27
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.14
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.07
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.96
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.88
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	96.86
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.76
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.64
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.37
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.08
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	94.83
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	92.39
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	91.99
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	90.99
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	90.88
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	89.66
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	88.85
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	88.1
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	82.33

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.10  E-value=8.4e-11  Score=114.09  Aligned_cols=122  Identities=17%  Similarity=0.207  Sum_probs=83.9

Q ss_pred             CCCcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccC----CCccccccCCCChHHHHHHHhhcceee-eccC---
Q psy3027           4 EWPNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYR----EPVRGWIDNVYGPIGMLVGIATGVLHT-HLIN---   73 (300)
Q Consensus         4 ~~pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~----eP~pGw~d~~~g~~~~~~~~~~G~l~~-~~~~---   73 (300)
                      .++|.|+.||+.+|+++++..  .+++++|+||+.|+|..+    .+..+|+..+     +......|.... +++.   
T Consensus       244 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l-----~~~~~~~g~~P~~~~~~~~~  318 (478)
T 4dqv_A          244 GWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRM-----VLSLMATGIAPRSFYEPDSE  318 (478)
T ss_dssp             TSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHH-----HHHHHHHCEEESCSBCCCTT
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHH-----HHHHHHcCcccccccccccc
Confidence            456889999999999999884  389999999999998644    1223333221     112234465432 2222   


Q ss_pred             ---CCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          74 ---LNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        74 ---~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                         ++...|.||||+|++ ++.++........   .. ..+||++++..+++||.|+.+. .+...
T Consensus       319 G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~---~~-~~~ynv~~~~~~~~s~~el~~~l~~~g~  380 (478)
T 4dqv_A          319 GNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL---AG-FATYHVMNPHDDGIGLDEYVDWLIEAGY  380 (478)
T ss_dssp             SCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCC---CS-EEEEEESCCCCSSCSHHHHHHHHHHTTC
T ss_pred             cccccceeeeeeHHHHHHHHHHHHhhcccCCC---CC-CceEEecCCCCCCcCHHHHHHHHHHcCC
Confidence               267889999999999 7776643221111   23 6799999986666999999999 77633

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.90  E-value=3.5e-09  Score=96.09  Aligned_cols=111  Identities=14%  Similarity=0.015  Sum_probs=85.4

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .+.|+.||+.+|+++.++.  .+++++|+||+.|+|....+-       .....++.....|....++++++...+.|+|
T Consensus       130 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v  202 (311)
T 3m2p_A          130 DLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKREFLYA  202 (311)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEH
T ss_pred             CchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEEceEEH
Confidence            3789999999999999873  599999999999999766432       1122344445556655677888999999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ ++.++.. .       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       203 ~Dva~a~~~~~~~-~-------~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  244 (311)
T 3m2p_A          203 KDAAKSVIYALKQ-E-------KV-SGTFNIGSG--DALTNYEVANTINNAFG  244 (311)
T ss_dssp             HHHHHHHHHHTTC-T-------TC-CEEEEECCS--CEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhc-C-------CC-CCeEEeCCC--CcccHHHHHHHHHHHhC
Confidence            99999 7666521 1       23 579999988  78999999999 88777

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.89  E-value=1.1e-08  Score=97.30  Aligned_cols=113  Identities=14%  Similarity=0.050  Sum_probs=80.1

Q ss_pred             CCcHHHHHHHHHHHHHHHhc-CCCCEEEecccEEeeccCCCccccccCCCC--hHHHHHHHhhcceeeeccCCCccccee
Q psy3027           5 WPNTYTFTKALAEDVLCKEG-KGLPLAVLRPAVIVSTYREPVRGWIDNVYG--PIGMLVGIATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~-~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g--~~~~~~~~~~G~l~~~~~~~~~~~diV   81 (300)
                      ..|.|+.||+.+|+++++.. .+++++|+||+.|+|....+.  |..+...  ...++.....+.. ...++++...+.+
T Consensus       224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v  300 (427)
T 4f6c_A          224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLDC-IGVSMAEMPVDFS  300 (427)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCC--CCTTGGGCHHHHHHHHHHHSSE-EEHHHHTCEECCE
T ss_pred             CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCc--cccCcchHHHHHHHHHHHhcCC-CCCccccceEEEe
Confidence            56899999999999999874 589999999999999776432  2222211  2233333333221 1123457888999


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HH
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-AT  131 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~  131 (300)
                      |||++++ ++.++...        .. ..+||++++  +++||.|+.+. .+
T Consensus       301 ~v~DvA~ai~~~~~~~--------~~-g~~~~l~~~--~~~s~~el~~~i~~  341 (427)
T 4f6c_A          301 FVDTTARQIVALAQVN--------TP-QIIYHVLSP--NKMPVKSLLECVKR  341 (427)
T ss_dssp             EHHHHHHHHHHHTTSC--------CC-CSEEEESCS--CCEEHHHHHHHHHS
T ss_pred             eHHHHHHHHHHHHcCC--------CC-CCEEEecCC--CCCcHHHHHHHHHH
Confidence            9999999 77665311        13 579999988  78999999999 65

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.88  E-value=1.7e-09  Score=100.68  Aligned_cols=113  Identities=12%  Similarity=0.062  Sum_probs=83.9

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHH-HHhhcceeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV-GIATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~-~~~~G~l~~~~~~~~~~~diVP   82 (300)
                      +|.|+.||+.+|+++.++.  .++|++|+||+.|+|...+|-      .++....+. ....|.. ....+++...+.|+
T Consensus       100 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~  172 (369)
T 3st7_A          100 DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN------YNSVIATFCYKIARNEE-IQVNDRNVELTLNY  172 (369)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT------SSCHHHHHHHHHHTTCC-CCCSCTTCEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCC------cchHHHHHHHHHHcCCC-eEecCCCeEEEEEE
Confidence            6899999999999998863  479999999999999877652      233333333 3334443 23347888999999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||++++ ++.++.....      .. ..+||++++  .++|++|+.+. .+..+
T Consensus       173 v~Dva~~~~~~l~~~~~------~~-~~~~~i~~~--~~~s~~e~~~~~~~~~g  217 (369)
T 3st7_A          173 VDDIVAEIKRAIEGTPT------IE-NGVPTVPNV--FKVTLGEIVDLLYKFKQ  217 (369)
T ss_dssp             HHHHHHHHHHHHHTCCC------EE-TTEECCSCC--EEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCcc------cC-CceEEeCCC--CceeHHHHHHHHHHHhC
Confidence            999999 7776642211      11 469999987  88999999999 77655

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.88  E-value=2.4e-09  Score=99.54  Aligned_cols=120  Identities=15%  Similarity=0.086  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHHHHhcC-CCCEEEecccEEeeccCCCccccccCCCChHH-HHHHHhhcceeeeccCCCcccceecccc
Q psy3027           8 TYTFTKALAEDVLCKEGK-GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIG-MLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~~-~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~-~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .|+.||..+|+++.++.. ++|++|+||+.|+|...++..++.+...+... ++.....|....++++++...+.|+||+
T Consensus       171 ~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  250 (372)
T 3slg_A          171 IYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDD  250 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHH
T ss_pred             cHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHH
Confidence            799999999999998844 89999999999999887654443333333322 3344455655567778889999999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.....  .   .. ..+||++++ ..++|+.|+.+. .+..+
T Consensus       251 va~a~~~~~~~~~~--~---~~-~~~~ni~~~-~~~~s~~e~~~~i~~~~g  294 (372)
T 3slg_A          251 GISALMKIIENSNG--V---AT-GKIYNIGNP-NNNFSVRELANKMLELAA  294 (372)
T ss_dssp             HHHHHHHHHHCGGG--T---TT-TEEEEECCT-TCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccC--c---CC-CceEEeCCC-CCCccHHHHHHHHHHHhC
Confidence            999 7666543211  0   23 579999983 168999999999 87776

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.85  E-value=2.8e-09  Score=98.21  Aligned_cols=116  Identities=15%  Similarity=0.009  Sum_probs=87.0

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~diVP   82 (300)
                      .+.|+.||..+|+++.++.  .+++++|+||+.|+|....+-..+    .+ ...++.....|....++++++...|.|+
T Consensus       172 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  247 (351)
T 3ruf_A          172 LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAY----AAVIPKWTAAMLKGDDVYINGDGETSRDFCY  247 (351)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTT----CCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcch----hhHHHHHHHHHHcCCCcEEeCCCCeEEeeEE
Confidence            4789999999999998863  389999999999999776543111    11 1234444555655567788899999999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||++++ ++.++....   .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       248 v~Dva~a~~~~~~~~~---~---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  292 (351)
T 3ruf_A          248 IDNVIQMNILSALAKD---S---AK-DNIYNVAVG--DRTTLNELSGYIYDELN  292 (351)
T ss_dssp             HHHHHHHHHHHHTCCG---G---GC-SEEEEESCS--CCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcc---c---cC-CCEEEeCCC--CcccHHHHHHHHHHHhC
Confidence            999999 766653311   1   23 679999998  78999999999 88777

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.81  E-value=6.3e-09  Score=93.54  Aligned_cols=115  Identities=10%  Similarity=-0.068  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHH----HhhcceeeeccCCCccccee
Q psy3027           8 TYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG----IATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~----~~~G~l~~~~~~~~~~~diV   81 (300)
                      .|+.||..+|+++.++.  .++|++|+||+.|+|....+-.+..   .....++..    ...|..-.++++++...|+|
T Consensus       141 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (319)
T 4b8w_A          141 GYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDG---HVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFI  217 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTS---CHHHHHHHHHHHHHHHTCCEEEESCSCCEECEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccc---cccHHHHHHHHHHhccCCceEEeCCCCeeEEEE
Confidence            59999999999998863  4899999999999997765422110   011112222    44555445677888999999


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +||++++ ++.++.....      .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       218 ~v~Dva~a~~~~~~~~~~------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  263 (319)
T 4b8w_A          218 YSLDLAQLFIWVLREYNE------VE-PIILSVGEE--DEVSIKEAAEAVVEAMD  263 (319)
T ss_dssp             EHHHHHHHHHHHHHHCCC------SS-CEEECCCGG--GCEEHHHHHHHHHHHTT
T ss_pred             eHHHHHHHHHHHHhcccc------CC-ceEEEecCC--CceeHHHHHHHHHHHhC
Confidence            9999999 7666533221      23 569999988  78999999999 88776

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.81  E-value=5.7e-09  Score=101.65  Aligned_cols=113  Identities=15%  Similarity=0.096  Sum_probs=80.5

Q ss_pred             CCcHHHHHHHHHHHHHHHhc-CCCCEEEecccEEeeccCCCcccc-ccCCCC--hHHHHHHHhhcceeeeccCCCcccce
Q psy3027           5 WPNTYTFTKALAEDVLCKEG-KGLPLAVLRPAVIVSTYREPVRGW-IDNVYG--PIGMLVGIATGVLHTHLINLNTVTDM   80 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~-~~lPv~IvRPsiV~~~~~eP~pGw-~d~~~g--~~~~~~~~~~G~l~~~~~~~~~~~di   80 (300)
                      ..|.|..||+.+|+++.++. .++|++|+||+.|+|....   || ..|...  ...++.....+.. ...++++...++
T Consensus       305 ~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~g~~~~~~  380 (508)
T 4f6l_B          305 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNG---RWHMRNIKTNRFSMVMNDLLQLDC-IGVSMAEMPVDF  380 (508)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSS---CCCCTTCTTCHHHHHHHHHTTCSE-EETTGGGSEEEC
T ss_pred             CCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCC---CcccCCcchHHHHHHHHHHHHcCC-CCCCccCceEEE
Confidence            46899999999999999874 6999999999999997764   33 222211  2233333333221 112345788999


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV  132 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~  132 (300)
                      +|||++++ ++.++...        .. ..+||++++  +++||.|+.+. .+.
T Consensus       381 v~v~DvA~ai~~~~~~~--------~~-~~~~nl~~~--~~~s~~el~~~i~~~  423 (508)
T 4f6l_B          381 SFVDTTARQIVALAQVN--------TP-QIIYHVLSP--NKMPVKSLLECVKRK  423 (508)
T ss_dssp             EEHHHHHHHHHHHTTBC--------CS-CSEEEESCS--CEEEHHHHHHHHHSS
T ss_pred             EcHHHHHHHHHHHHhCC--------CC-CCEEEeCCC--CCCCHHHHHHHHHHc
Confidence            99999999 77665321        13 579999998  88999999998 654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.80  E-value=8.7e-09  Score=94.68  Aligned_cols=110  Identities=19%  Similarity=0.045  Sum_probs=83.8

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||+.+|+++.++.  .+++++|+||+.|+|....+-       .....++.....|..-.+.++++...|.|+||
T Consensus       172 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  244 (346)
T 4egb_A          172 SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVT  244 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHH
Confidence            789999999999999873  389999999999999765331       11223444444555445667888999999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+++ ++.++.. .       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       245 Dva~a~~~~~~~-~-------~~-g~~~~i~~~--~~~s~~e~~~~i~~~~g  285 (346)
T 4egb_A          245 DHCSAIDVVLHK-G-------RV-GEVYNIGGN--NEKTNVEVVEQIITLLG  285 (346)
T ss_dssp             HHHHHHHHHHHH-C-------CT-TCEEEECCS--CCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc-C-------CC-CCEEEECCC--CceeHHHHHHHHHHHhC
Confidence            9999 7666532 1       22 569999998  78999999999 87777

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.78  E-value=1.2e-08  Score=93.37  Aligned_cols=120  Identities=16%  Similarity=0.018  Sum_probs=84.8

Q ss_pred             cHHHHHHHHHHHHHHHh---cCCCCEEEecccEEeeccCCCccccccCC--CChHHHHHHHhhccee--eecc------C
Q psy3027           7 NTYTFTKALAEDVLCKE---GKGLPLAVLRPAVIVSTYREPVRGWIDNV--YGPIGMLVGIATGVLH--THLI------N   73 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~---~~~lPv~IvRPsiV~~~~~eP~pGw~d~~--~g~~~~~~~~~~G~l~--~~~~------~   73 (300)
                      +.|+.||+.+|++++..   .++++++|+||+.|+|.....+.|...+-  ......+.....|...  .+.+      +
T Consensus       151 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  230 (341)
T 3enk_A          151 NPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPD  230 (341)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTT
T ss_pred             ChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCC
Confidence            78999999999999875   34699999999999998765444442221  2233344443444222  2334      6


Q ss_pred             CCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          74 LNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        74 ~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++...|.|+||++++ ++.++.....  .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       231 g~~~~~~i~v~Dva~a~~~~~~~~~~--~---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  285 (341)
T 3enk_A          231 GTGVRDYIHVVDLARGHIAALDALER--R---DA-SLTVNLGTG--RGYSVLEVVRAFEKASG  285 (341)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHHH--H---TS-CEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred             CCeeEeeEEHHHHHHHHHHHHHhhhc--C---Cc-ceEEEeCCC--CceeHHHHHHHHHHHhC
Confidence            788889999999999 7766643111  1   23 579999988  88999999999 77766

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.78  E-value=1.5e-08  Score=91.91  Aligned_cols=109  Identities=13%  Similarity=0.073  Sum_probs=82.3

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhc-ceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATG-VLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G-~l~~~~~~~~~~~diVPV   83 (300)
                      +.|+.||+.+|++++..+  .+++++|+||+.|+|....+  |++      ..++.....| ......++++...|.|+|
T Consensus       136 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  207 (313)
T 3ehe_A          136 SLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVI------YDFIMKLKRNPEELEILGNGEQNKSYIYI  207 (313)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHH------HHHHHHHHHCTTEEEESTTSCCEECCEEH
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChH------HHHHHHHHcCCCceEEeCCCCeEEeEEEH
Confidence            679999999999998863  48999999999999965542  221      2233333344 222466788889999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |++++ ++.++.   .  .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       208 ~Dva~a~~~~~~---~--~---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  249 (313)
T 3ehe_A          208 SDCVDAMLFGLR---G--D---ER-VNIFNIGSE--DQIKVKRIAEIVCEELG  249 (313)
T ss_dssp             HHHHHHHHHHTT---C--C---SS-EEEEECCCS--CCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhc---c--C---CC-CceEEECCC--CCeeHHHHHHHHHHHhC
Confidence            99999 766653   1  1   23 579999988  78999999999 88777

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.77  E-value=1.3e-08  Score=94.46  Aligned_cols=114  Identities=11%  Similarity=-0.020  Sum_probs=85.4

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|+.||+.+|+++......++++|+||+.|+|....+-..+.   .....++.....|......++++...+.|+||.
T Consensus       158 ~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  234 (362)
T 3sxp_A          158 ENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTA---SMVLQLALGAMAFKEVKLFEFGEQLRDFVYIED  234 (362)
T ss_dssp             SSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGS---CHHHHHHHHHHTTSEEECSGGGCCEEECEEHHH
T ss_pred             CChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcch---hHHHHHHHHHHhCCCeEEECCCCeEEccEEHHH
Confidence            46799999999999999877799999999999987654432110   112234444555655556677888999999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |++ ++.++..     .   .. + +||++++  .++|+.|+.+. .+..+
T Consensus       235 va~ai~~~~~~-----~---~~-g-~~~i~~~--~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          235 VIQANVKAMKA-----Q---KS-G-VYNVGYS--QARSYNEIVSILKEHLG  273 (362)
T ss_dssp             HHHHHHHHTTC-----S---SC-E-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhc-----C---CC-C-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence            999 7666521     1   23 5 9999988  78999999999 77766

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.76  E-value=2.7e-08  Score=89.88  Aligned_cols=109  Identities=11%  Similarity=-0.047  Sum_probs=82.7

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCC-CEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGL-PLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~l-Pv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVP   82 (300)
                      .+.|+.||+.+|+++.++.  .++ +++|+||+.|+|....+ .    +  ....++.....|..-.+.++++...+.|+
T Consensus       140 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  212 (321)
T 3vps_A          140 RSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP-D----A--LVPRLCANLLTRNELPVEGDGEQRRDFTY  212 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-T----S--HHHHHHHHHHHHSEEEEETTSCCEECEEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-C----C--hHHHHHHHHHcCCCeEEeCCCCceEceEE
Confidence            4789999999999999873  478 99999999999976543 1    1  12233444445554456778889999999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.+++ ++.++..     .   .. + +||++++  .++|+.|+.+. . ..+
T Consensus       213 v~Dva~~~~~~~~~-----~---~~-g-~~~i~~~--~~~s~~e~~~~i~-~~g  253 (321)
T 3vps_A          213 ITDVVDKLVALANR-----P---LP-S-VVNFGSG--QSLSVNDVIRILQ-ATS  253 (321)
T ss_dssp             HHHHHHHHHHGGGS-----C---CC-S-EEEESCS--CCEEHHHHHHHHH-TTC
T ss_pred             HHHHHHHHHHHHhc-----C---CC-C-eEEecCC--CcccHHHHHHHHH-HhC
Confidence            999999 7666521     1   23 5 9999988  78999999999 8 665

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.72  E-value=3e-08  Score=88.59  Aligned_cols=101  Identities=17%  Similarity=0.147  Sum_probs=77.0

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      |.|..||+.+|+++.+. .+++++|+||+.|+|..+.++.    .+          ..|....+.++ +...+.|+||.+
T Consensus       125 ~~Y~~sK~~~E~~~~~~-~~~~~~ilRp~~v~G~~~~~~~----~~----------~~~~~~~~~~~-~~~~~~i~v~Dv  188 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV-PNLPLHVFRLAGIYGPGRGPFS----KL----------GKGGIRRIIKP-GQVFSRIHVEDI  188 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS-TTCCEEEEEECEEEBTTBSSST----TS----------SSSCCCEEECT-TCCBCEEEHHHH
T ss_pred             CHHHHHHHHHHHHHHhh-cCCCEEEEeccceECCCchHHH----HH----------hcCCccccCCC-CcccceEEHHHH
Confidence            67999999999999988 7899999999999997665432    11          12332233333 567899999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ ++.++.+ .       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       189 a~a~~~~~~~-~-------~~-g~~~~i~~~--~~~s~~e~~~~i~~~~g  227 (286)
T 3ius_A          189 AQVLAASMAR-P-------DP-GAVYNVCDD--EPVPPQDVIAYAAELQG  227 (286)
T ss_dssp             HHHHHHHHHS-C-------CT-TCEEEECCS--CCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhC-C-------CC-CCEEEEeCC--CCccHHHHHHHHHHHcC
Confidence            99 7666531 1       22 569999988  78999999999 87776

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.72  E-value=1.9e-08  Score=92.04  Aligned_cols=120  Identities=13%  Similarity=0.065  Sum_probs=84.2

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      +.|+.||+.+|+++.++.  .+++++|+||+.|+|...++...+..+..+ ...++.....|....++++++...+.|+|
T Consensus       146 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  225 (345)
T 2bll_A          146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  225 (345)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred             cccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEH
Confidence            389999999999998763  389999999999999776543222111111 12344444455544466777888899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCC-cccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARN-PISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~n-p~t~~~~~~~-~~~~~  134 (300)
                      |.+++ ++.++.+...  .   .. ..+||++++  . ++|+.|+.+. .+..+
T Consensus       226 ~Dva~a~~~~~~~~~~--~---~~-g~~~~i~~~--~~~~s~~e~~~~i~~~~g  271 (345)
T 2bll_A          226 RDGIEALYRIIENAGN--R---CD-GEIINIGNP--ENEASIEELGEMLLASFE  271 (345)
T ss_dssp             HHHHHHHHHHHHCGGG--T---TT-TEEEEECCT--TSEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccc--c---CC-CceEEeCCC--CCCCCHHHHHHHHHHHhC
Confidence            99999 7666532210  0   13 579999976  4 7999999999 77766

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.72  E-value=2e-08  Score=94.14  Aligned_cols=118  Identities=11%  Similarity=0.040  Sum_probs=84.4

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCC---ccccccCCC------C-hHHHHHHHhhcceeeeccC
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREP---VRGWIDNVY------G-PIGMLVGIATGVLHTHLIN   73 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP---~pGw~d~~~------g-~~~~~~~~~~G~l~~~~~~   73 (300)
                      .+.|+.||+.+|+++...+  .+++++|+||+.|+|....+   -|+|+++..      + ...++.....|....+.++
T Consensus       189 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  268 (404)
T 1i24_A          189 SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGK  268 (404)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETT
T ss_pred             CChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCC
Confidence            3689999999999998763  28999999999999987654   345554432      2 2234444455654446678


Q ss_pred             CCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027          74 LNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV  132 (300)
Q Consensus        74 ~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~  132 (300)
                      ++...|.|+||+||+ ++.++.....  .   +. ..+||+++   .++|+.|+.+. .+.
T Consensus       269 g~~~~~~i~v~Dva~a~~~~l~~~~~--~---g~-~~~yni~~---~~~s~~e~~~~i~~~  320 (404)
T 1i24_A          269 GGQTRGYLDIRDTVQCVEIAIANPAK--A---GE-FRVFNQFT---EQFSVNELASLVTKA  320 (404)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHSCCC--T---TC-EEEEEECS---EEEEHHHHHHHHHHH
T ss_pred             CCceECcEEHHHHHHHHHHHHhCccc--C---CC-ceEEEECC---CCCcHHHHHHHHHHH
Confidence            888899999999999 7766532111  0   11 26999975   47999999999 775

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.70  E-value=6.2e-08  Score=88.54  Aligned_cols=105  Identities=13%  Similarity=0.215  Sum_probs=77.2

Q ss_pred             CcHHHHHHHHHHHHHHHhc-CCCCEEEecccEEeeccC-CCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           6 PNTYTFTKALAEDVLCKEG-KGLPLAVLRPAVIVSTYR-EPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~-~~lPv~IvRPsiV~~~~~-eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .+.|+.||+.+|+++.+.. .+++++|+||+.|+|... .|  +       ...++.....|....+   ++...+.++|
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v  219 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---VAGQRNVIDA  219 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---ECCEEEEEEH
T ss_pred             cChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---cCCCcceeeH
Confidence            5789999999999998862 389999999999998655 21  1       1233333444543223   5677899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ ++.++.+ .       .. ..+||++++  . +|+.|+.+. .+..+
T Consensus       220 ~Dva~~~~~~~~~-~-------~~-g~~~~v~~~--~-~s~~e~~~~i~~~~g  260 (342)
T 2x4g_A          220 AEAGRGLLMALER-G-------RI-GERYLLTGH--N-LEMADLTRRIAELLG  260 (342)
T ss_dssp             HHHHHHHHHHHHH-S-------CT-TCEEEECCE--E-EEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhC-C-------CC-CceEEEcCC--c-ccHHHHHHHHHHHhC
Confidence            99999 7666532 1       22 469999987  6 999999999 87766

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.69  E-value=2.8e-08  Score=89.83  Aligned_cols=114  Identities=11%  Similarity=-0.000  Sum_probs=79.4

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhc-ceeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATG-VLHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G-~l~~~~~~~~~~~diVP   82 (300)
                      .+.|+.||+.+|+++++..  .+++++|+||+.|+|....+  ++      ...++.....+ ..-...++++...|.|+
T Consensus       134 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  205 (312)
T 3ko8_A          134 ISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GV------IYDFIMKLRRNPNVLEVLGDGTQRKSYLY  205 (312)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SH------HHHHHHHHHHCTTEEEEC----CEECEEE
T ss_pred             CChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--Ch------HHHHHHHHHhCCCCeEEcCCCCeEEeeEE
Confidence            4789999999999998874  38999999999999965432  11      12233333333 22235677888899999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.+++ ++.++.+.... .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       206 v~Dva~a~~~~~~~~~~~-~---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  252 (312)
T 3ko8_A          206 VRDAVEATLAAWKKFEEM-D---AP-FLALNVGNV--DAVRVLDIAQIVAEVLG  252 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHS-C---CS-EEEEEESCS--SCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcccc-C---CC-CcEEEEcCC--CceeHHHHHHHHHHHhC
Confidence            999999 76665431100 1   23 579999988  78999999999 88777

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.68  E-value=2.7e-08  Score=92.95  Aligned_cols=118  Identities=13%  Similarity=0.061  Sum_probs=85.7

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccc-cccCC----CC-hHHHHHHHhhcceeeeccCCCcc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRG-WIDNV----YG-PIGMLVGIATGVLHTHLINLNTV   77 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pG-w~d~~----~g-~~~~~~~~~~G~l~~~~~~~~~~   77 (300)
                      .+.|..||+.+|+++.+..  .+++++|+||+.|+|....+.+| |..+.    .+ ...++..+..|..-.++++++..
T Consensus       178 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~  257 (377)
T 2q1s_A          178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT  257 (377)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE
Confidence            4689999999999998863  38999999999999977643333 22221    12 22344444455543456778889


Q ss_pred             cceecccccccc-ccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          78 TDMVPSTVSDGP-SEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        78 ~diVPVD~vvn~-i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+.|+||++++. ++.+....       .. + +||++++  .++|++|+.+. .+..+
T Consensus       258 ~~~i~v~Dva~a~i~~~~~~~-------~~-g-~~~i~~~--~~~s~~e~~~~i~~~~g  305 (377)
T 2q1s_A          258 RDFIFVEDVANGLIACAADGT-------PG-G-VYNIASG--KETSIADLATKINEITG  305 (377)
T ss_dssp             ECCEEHHHHHHHHHHHHHHCC-------TT-E-EEECCCC--CCEEHHHHHHHHHHHHT
T ss_pred             EeeEEHHHHHHHHHHHHHhcC-------CC-C-eEEecCC--CceeHHHHHHHHHHHhC
Confidence            999999999994 66654321       23 6 9999987  78999999999 87766

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.66  E-value=8.2e-08  Score=87.40  Aligned_cols=121  Identities=17%  Similarity=0.096  Sum_probs=82.3

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccC-CCChHHHHHHHhhcc--eeeecc------CC
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDN-VYGPIGMLVGIATGV--LHTHLI------NL   74 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~-~~g~~~~~~~~~~G~--l~~~~~------~~   74 (300)
                      .+.|+.||+.+|+++....  .+++++|+||+.|+|.......|.-+. .......+.....|.  .-.+++      ++
T Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          139 TNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             CChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            3789999999999998863  389999999999999764333332211 122233333333322  112333      56


Q ss_pred             Ccccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          75 NTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        75 ~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +...|.|+||++++ ++.++.....  .   .. ..+||++++  .++|++|+.+. .+..+
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~--~---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  272 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQN--G---GE-SDFYNLGNG--NGFSVKEIVDAVREVTN  272 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHT--T---CC-CEEEECCCT--TCBCHHHHHHHHHHHTT
T ss_pred             ceeEeeEeHHHHHHHHHHHHhcccc--C---CC-CCeEEeCCC--CCccHHHHHHHHHHHhC
Confidence            77889999999999 7666532221  0   12 469999987  78999999999 87766

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.66  E-value=3.7e-08  Score=92.15  Aligned_cols=124  Identities=15%  Similarity=0.013  Sum_probs=83.1

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccC-CCChHHHHH-----HHhhcce----------
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDN-VYGPIGMLV-----GIATGVL----------   67 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~-~~g~~~~~~-----~~~~G~l----------   67 (300)
                      .+.|+.||+.+|+++....  .+++++|+||+.|+|.......|..+. -......+.     ....|..          
T Consensus       172 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (397)
T 1gy8_A          172 ESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTD  251 (397)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------C
T ss_pred             CCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccC
Confidence            3789999999999998863  289999999999999876554454322 223333333     3323321          


Q ss_pred             --eeecc------CCCcccceeccccccc-cccccccccCCCCCCCCCCC---cEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          68 --HTHLI------NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPI---PIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        68 --~~~~~------~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~---~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                        -.+++      +++...|.|+||+|++ ++.++........  ... .   .+||++++  +++|+.|+.+. .+..+
T Consensus       252 ~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~--~~~-~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g  326 (397)
T 1gy8_A          252 KRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGP--NDK-SKYFSVFNLGTS--RGYSVREVIEVARKTTG  326 (397)
T ss_dssp             CCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCT--TTG-GGSEEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred             CCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhccccccc--ccc-cCCCcEEEeCCC--CcccHHHHHHHHHHHhC
Confidence              12333      5677889999999999 7766532211000  001 2   79999987  78999999999 77766

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.63  E-value=5e-08  Score=89.94  Aligned_cols=115  Identities=13%  Similarity=-0.063  Sum_probs=83.0

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCCh-HHHHHHHhhcceeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGP-IGMLVGIATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~-~~~~~~~~~G~l~~~~~~~~~~~diVP   82 (300)
                      .+.|+.||+.+|+++....  .+++++|+||+.|+|....+-..    ..+. ..++.....|....++++++...+.|+
T Consensus       174 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  249 (352)
T 1sb8_A          174 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGA----YAAVIPKWTSSMIQGDDVYINGDGETSRDFCY  249 (352)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCST----TCCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcc----hhhHHHHHHHHHHCCCCcEEeCCCCceEeeEE
Confidence            4789999999999998763  38999999999999976543210    1111 123333445554446678888899999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHc
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVC  133 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~  133 (300)
                      ||.+++ ++.++....   .   .. ..+||++++  .++|++|+.+. .+..
T Consensus       250 v~Dva~a~~~~~~~~~---~---~~-~~~~ni~~~--~~~s~~e~~~~i~~~~  293 (352)
T 1sb8_A          250 IENTVQANLLAATAGL---D---AR-NQVYNIAVG--GRTSLNQLFFALRDGL  293 (352)
T ss_dssp             HHHHHHHHHHHHTCCG---G---GC-SEEEEESCS--CCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccc---c---CC-CceEEeCCC--CCccHHHHHHHHHHHH
Confidence            999999 766653211   1   23 579999988  78999999999 7776

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.60  E-value=4.8e-08  Score=90.14  Aligned_cols=117  Identities=11%  Similarity=-0.044  Sum_probs=79.8

Q ss_pred             CcHHHHHHHHHHHHHHHhc-----------CCCCEEEecccEEeeccCCCccccccCCCCh-HHHHHHHhhcceeeeccC
Q psy3027           6 PNTYTFTKALAEDVLCKEG-----------KGLPLAVLRPAVIVSTYREPVRGWIDNVYGP-IGMLVGIATGVLHTHLIN   73 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~-----------~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~-~~~~~~~~~G~l~~~~~~   73 (300)
                      .+.|+.||+.+|+++....           .+++++|+||+.|+|....+-       .+. ..++.....|....+ ++
T Consensus       154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-------~~~~~~~~~~~~~g~~~~~-~~  225 (357)
T 1rkx_A          154 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-------DRIVPDILRAFEQSQPVII-RN  225 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-------SCHHHHHHHHHHTTCCEEC-SC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-------ccHHHHHHHHHhcCCCEEE-CC
Confidence            4789999999999998763           289999999999999643211       111 223333444543223 35


Q ss_pred             CCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          74 LNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        74 ~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++...|.|+||.+++ ++.++........   .. ..+||++++...++|+.|+.+. .+..+
T Consensus       226 ~~~~~~~v~v~Dva~a~~~~~~~~~~~~~---~~-~~~~ni~~~~~~~~s~~e~~~~i~~~~g  284 (357)
T 1rkx_A          226 PHAIRPWQHVLEPLSGYLLLAQKLYTDGA---EY-AEGWNFGPNDADATPVKNIVEQMVKYWG  284 (357)
T ss_dssp             TTCEECCEETHHHHHHHHHHHHHHHHTCG---GG-CSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred             CCCeeccEeHHHHHHHHHHHHHhhhhcCC---CC-CceEEECCCCCCcccHHHHHHHHHHHhC
Confidence            677889999999999 7666532100000   12 4699999753468999999999 87766

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.59  E-value=7.8e-08  Score=88.33  Aligned_cols=111  Identities=11%  Similarity=-0.067  Sum_probs=80.7

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||+.+|+++.+..  .+++++|+||+.|+|....+-.+     .....++.....|..-.++++++...+.|+||
T Consensus       168 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  242 (343)
T 2b69_A          168 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVS  242 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHH
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHH
Confidence            569999999999998753  48999999999999976543211     01122333333444334567788889999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+++ ++.++.   .      .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       243 Dva~a~~~~~~---~------~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  282 (343)
T 2b69_A          243 DLVNGLVALMN---S------NV-SSPVNLGNP--EEHTILEFAQLIKNLVG  282 (343)
T ss_dssp             HHHHHHHHHHT---S------SC-CSCEEESCC--CEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHh---c------CC-CCeEEecCC--CCCcHHHHHHHHHHHhC
Confidence            9999 765542   1      12 469999988  78999999999 87766

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.59  E-value=8.6e-08  Score=87.62  Aligned_cols=111  Identities=14%  Similarity=0.047  Sum_probs=81.2

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .+.|+.||+.+|+++.+..  .+++++|+||+.|+|....+ .+.      ...++.....|..-.++++++...+.++|
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  220 (337)
T 1r6d_A          148 NSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-EKL------IPLFVTNLLDGGTLPLYGDGANVREWVHT  220 (337)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-TSH------HHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC-CCh------HHHHHHHHhcCCCcEEeCCCCeeEeeEeH
Confidence            3789999999999998763  38999999999999976532 111      11233333344433455777888899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ ++.++.+ .       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       221 ~Dva~a~~~~~~~-~-------~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g  262 (337)
T 1r6d_A          221 DDHCRGIALVLAG-G-------RA-GEIYHIGGG--LELTNRELTGILLDSLG  262 (337)
T ss_dssp             HHHHHHHHHHHHH-C-------CT-TCEEEECCC--CEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhC-C-------CC-CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence            99999 7665532 1       22 569999987  78999999999 77766

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.58  E-value=4e-08  Score=89.93  Aligned_cols=116  Identities=17%  Similarity=0.119  Sum_probs=81.9

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCcc--ccccCCCChHHHHHHHhhcc-----eeeeccCCCc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVR--GWIDNVYGPIGMLVGIATGV-----LHTHLINLNT   76 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~p--Gw~d~~~g~~~~~~~~~~G~-----l~~~~~~~~~   76 (300)
                      .+.|+.||+.+|+++.+..  .+++++|+||+.|.|....+..  |++      ..++.....|.     .-...++++.
T Consensus       162 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~g~~  235 (347)
T 1orr_A          162 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWV------GWFCQKAVEIKNGINKPFTISGNGKQ  235 (347)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHH------HHHHHHHHHHHTTCCCCEEEESSSCC
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHH------HHHHHHHHhCcccCCCCeEEecCCcc
Confidence            4689999999999998863  3899999999999997654321  111      12222232332     2235677888


Q ss_pred             ccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          77 VTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        77 ~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ..|.|+||.+++ ++.++....   .   .. +.+||++++..+++|+.|+.+. .+..+
T Consensus       236 ~~~~i~v~Dva~a~~~~~~~~~---~---~~-g~~~~v~~~~~~~~s~~e~~~~i~~~~g  288 (347)
T 1orr_A          236 VRDVLHAEDMISLYFTALANVS---K---IR-GNAFNIGGTIVNSLSLLELFKLLEDYCN  288 (347)
T ss_dssp             EEECEEHHHHHHHHHHHHHTHH---H---HT-TCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred             eEeeEEHHHHHHHHHHHHhccc---c---CC-CCEEEeCCCCCCCccHHHHHHHHHHHhC
Confidence            899999999999 766653211   1   23 5699999875457999999999 87766

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.58  E-value=1.3e-07  Score=86.26  Aligned_cols=111  Identities=13%  Similarity=0.035  Sum_probs=78.6

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .+.|+.||+.+|+++.+..  .+++++|+||+.|+|....|- +.      ...++.....|..-.+.++++...+.++|
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  220 (336)
T 2hun_A          148 SSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KL------IPKTIIRASLGLKIPIYGTGKNVRDWLYV  220 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SH------HHHHHHHHHTTCCEEEETC---CEEEEEH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-ch------HHHHHHHHHcCCCceEeCCCCceeeeEEH
Confidence            4689999999999998763  489999999999999765320 11      11233333344333455677778899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ ++.++.+ .       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       221 ~Dva~~~~~~~~~-~-------~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g  262 (336)
T 2hun_A          221 EDHVRAIELVLLK-G-------ES-REIYNISAG--EEKTNLEVVKIILRLMG  262 (336)
T ss_dssp             HHHHHHHHHHHHH-C-------CT-TCEEEECCS--CEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhC-C-------CC-CCEEEeCCC--CcccHHHHHHHHHHHhC
Confidence            99999 7666522 1       23 569999987  78999999999 87776

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.58  E-value=3.4e-08  Score=90.73  Aligned_cols=119  Identities=12%  Similarity=0.060  Sum_probs=80.1

Q ss_pred             CcHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCC-cccccc----CC-----------CC-hHHHHHHHhhcc
Q psy3027           6 PNTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREP-VRGWID----NV-----------YG-PIGMLVGIATGV   66 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP-~pGw~d----~~-----------~g-~~~~~~~~~~G~   66 (300)
                      .+.|+.||+.+|+++.++  ..+++++|+||+.|++..... -+|+..    ..           .+ ...++.....|.
T Consensus       149 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (347)
T 4id9_A          149 NSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGE  228 (347)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSS
T ss_pred             CChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCC
Confidence            478999999999999876  348999999999999322210 011110    00           00 111222333444


Q ss_pred             eeeeccCCCcccce----eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          67 LHTHLINLNTVTDM----VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        67 l~~~~~~~~~~~di----VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .-.+.++++...|.    |+||.+++ ++.++....       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       229 ~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  292 (347)
T 4id9_A          229 PSHILARNENGRPFRMHITDTRDMVAGILLALDHPE-------AA-GGTFNLGAD--EPADFAALLPKIAALTG  292 (347)
T ss_dssp             CCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG-------GT-TEEEEESCS--SCEEHHHHHHHHHHHHC
T ss_pred             CeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc-------cC-CCeEEECCC--CcccHHHHHHHHHHHhC
Confidence            33466677777788    99999999 776663221       12 579999988  78999999999 87776

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.57  E-value=6.6e-08  Score=87.68  Aligned_cols=121  Identities=8%  Similarity=-0.075  Sum_probs=80.9

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCCh-HHHHHHHh----hc-ceeeeccCCCccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGP-IGMLVGIA----TG-VLHTHLINLNTVT   78 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~-~~~~~~~~----~G-~l~~~~~~~~~~~   78 (300)
                      +.|..||+.+|+++.++.  .+++++|+||+.|+|....+.++    -.+. ..++..+.    .| .--.++++++...
T Consensus       134 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~  209 (321)
T 1e6u_A          134 EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS----NSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR  209 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTT----CSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEE
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCC----CCccHHHHHHHHHHhhhcCCCceEEcCCCCEEE
Confidence            489999999999998863  38999999999999976643211    1111 12222222    23 2223567788899


Q ss_pred             ceeccccccc-cccccccccCCC-CCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          79 DMVPSTVSDG-PSEGVWQKKFPT-SVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        79 diVPVD~vvn-~i~aa~~~~~~~-~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.|+||.+++ ++.++.+..... ..+... ..+||++++  .++|+.|+.+. .+..+
T Consensus       210 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  265 (321)
T 1e6u_A          210 EFLHVDDMAAASIHVMELAHEVWLENTQPM-LSHINVGTG--VDCTIRELAQTIAKVVG  265 (321)
T ss_dssp             CEEEHHHHHHHHHHHHHSCHHHHHHTSBTT-BCCEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred             EeEEHHHHHHHHHHHHhCcccccccccccC-CceEEeCCC--CCccHHHHHHHHHHHhC
Confidence            9999999999 766653211000 000012 369999987  78999999999 77766

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.56  E-value=1.4e-07  Score=86.45  Aligned_cols=121  Identities=13%  Similarity=-0.005  Sum_probs=80.8

Q ss_pred             CcHHHHHHHHHHHHHHHhc---CCCCEEEecccEEeeccCCCccccccC--CCChHHHHHHHhh--cceeeecc------
Q psy3027           6 PNTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVSTYREPVRGWIDN--VYGPIGMLVGIAT--GVLHTHLI------   72 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~~~eP~pGw~d~--~~g~~~~~~~~~~--G~l~~~~~------   72 (300)
                      .+.|+.||+.+|+++....   .+++++|+||+.|+|.....+.|.-+.  .......+.....  |..-.+.+      
T Consensus       154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (348)
T 1ek6_A          154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE  233 (348)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCC
Confidence            4789999999999998863   349999999999998754222222111  1222333333333  32222333      


Q ss_pred             CCCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          73 NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        73 ~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++...|.|+||.+++ ++.++.....  .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       234 ~g~~~~~~i~v~Dva~a~~~~~~~~~~--~---~g-~~~~ni~~~--~~~s~~e~~~~i~~~~g  289 (348)
T 1ek6_A          234 DGTGVRDYIHVVDLAKGHIAALRKLKE--Q---CG-CRIYNLGTG--TGYSVLQMVQAMEKASG  289 (348)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTT--T---CC-EEEEEECCS--CCEEHHHHHHHHHHHHC
T ss_pred             CCceEEeeEEHHHHHHHHHHHHhcccc--c---CC-ceEEEeCCC--CCccHHHHHHHHHHHhC
Confidence            4577889999999999 7666532211  1   11 269999987  78999999999 87766

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.55  E-value=9.7e-08  Score=85.93  Aligned_cols=113  Identities=10%  Similarity=-0.009  Sum_probs=71.1

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCc-cccee
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNT-VTDMV   81 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~-~~diV   81 (300)
                      .+.|+.||+.+|+++.+..  .+++++|+||+.|+|....+..    +..+.. .++..+..|....+.++++. ..+.|
T Consensus       137 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i  212 (310)
T 1eq2_A          137 LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  212 (310)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGG----GGSCHHHHHHHHHHC-------------CBCEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCC----ccchHHHHHHHHHHcCCCcEEecCCCcceEccE
Confidence            4689999999999998874  4899999999999997654311    112222 23333334433234566777 88999


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +||.+++ ++.++.+         .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       213 ~v~Dva~~~~~~~~~---------~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  255 (310)
T 1eq2_A          213 YVGDVADVNLWFLEN---------GV-SGIFNLGTG--RAESFQAVADATLAYHK  255 (310)
T ss_dssp             EHHHHHHHHHHHHHH---------CC-CEEEEESCS--CCBCHHHHHHHC-----
T ss_pred             EHHHHHHHHHHHHhc---------CC-CCeEEEeCC--CccCHHHHHHHHHHHcC
Confidence            9999999 7666521         12 469999987  78999999999 77665

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.55  E-value=1.1e-07  Score=87.20  Aligned_cols=111  Identities=12%  Similarity=-0.006  Sum_probs=81.5

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .+.|..||+.+|+++.+..  .+++++|+||+.|+|....+- +.      ...++.....|....++++++...+.++|
T Consensus       158 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  230 (348)
T 1oc2_A          158 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KF------IPRQITNILAGIKPKLYGEGKNVRDWIHT  230 (348)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SH------HHHHHHHHHHTCCCEEETTSCCEEECEEH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-ch------HHHHHHHHHcCCCceEecCCCceEeeEEH
Confidence            3789999999999998863  389999999999998665321 11      11233333445433455677888899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.|++ ++.++.+ .       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       231 ~Dva~~~~~~~~~-~-------~~-g~~~~i~~~--~~~s~~e~~~~i~~~~g  272 (348)
T 1oc2_A          231 NDHSTGVWAILTK-G-------RM-GETYLIGAD--GEKNNKEVLELILEKMG  272 (348)
T ss_dssp             HHHHHHHHHHHHH-C-------CT-TCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhC-C-------CC-CCeEEeCCC--CCCCHHHHHHHHHHHhC
Confidence            99999 7666531 1       22 569999987  78999999999 87766

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.53  E-value=1.3e-07  Score=87.05  Aligned_cols=111  Identities=14%  Similarity=0.028  Sum_probs=81.2

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .+.|+.||+.+|+++....  .+++++|+||+.|.|....|- +.      ...++.....|..-.+.++++...+.++|
T Consensus       164 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  236 (361)
T 1kew_A          164 SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KL------IPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (361)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SH------HHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cH------HHHHHHHHHcCCCceEcCCCceeEeeEEH
Confidence            4789999999999998863  289999999999999765321 11      12233333445433455677788899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ ++.++.+ .       .. +.+||++++  .++|+.|+.+. .+..+
T Consensus       237 ~Dva~a~~~~~~~-~-------~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g  278 (361)
T 1kew_A          237 EDHARALHMVVTE-G-------KA-GETYNIGGH--NEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             HHHHHHHHHHHHH-C-------CT-TCEEEECCC--CEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-C-------CC-CCEEEecCC--CeeeHHHHHHHHHHHhC
Confidence            99999 7666532 1       23 569999987  78999999999 77665

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.53  E-value=1.7e-07  Score=83.92  Aligned_cols=101  Identities=14%  Similarity=0.010  Sum_probs=74.8

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|+.||..+|++ .+.   ++++|+||+.|+|....+   +          +.....   ....++++...|.|+||.
T Consensus       130 ~~~Y~~sK~~~E~~-~~~---~~~~ilR~~~v~G~~~~~---~----------~~~~~~---~~~~~~~~~~~~~i~v~D  189 (286)
T 3gpi_A          130 KDFSGKRMLEAEAL-LAA---YSSTILRFSGIYGPGRLR---M----------IRQAQT---PEQWPARNAWTNRIHRDD  189 (286)
T ss_dssp             CSHHHHHHHHHHHH-GGG---SSEEEEEECEEEBTTBCH---H----------HHHTTC---GGGSCSSBCEECEEEHHH
T ss_pred             CChhhHHHHHHHHH-Hhc---CCeEEEecccccCCCchh---H----------HHHHHh---cccCCCcCceeEEEEHHH
Confidence            47899999999999 664   999999999999965531   1          111111   123367788889999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.....  .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       190 va~~~~~~~~~~~~--~---~~-~~~~~~~~~--~~~s~~e~~~~i~~~~g  232 (286)
T 3gpi_A          190 GAAFIAYLIQQRSH--A---VP-ERLYIVTDN--QPLPVHDLLRWLADRQG  232 (286)
T ss_dssp             HHHHHHHHHHHHTT--S---CC-CSEEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhhhcc--C---CC-CceEEEeCC--CCCCHHHHHHHHHHHcC
Confidence            999 7666643210  1   23 579999987  78999999999 88777

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.53  E-value=1.8e-07  Score=84.79  Aligned_cols=111  Identities=13%  Similarity=-0.035  Sum_probs=79.9

Q ss_pred             CcHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhh---c--ceeeeccCCCccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIAT---G--VLHTHLINLNTVT   78 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~---G--~l~~~~~~~~~~~   78 (300)
                      .+.|..||+.+|+++.....  +++++|+||+.|+|....+ .+.      ...++.....   |  ......++++...
T Consensus       149 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~-~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  221 (321)
T 2pk3_A          149 MSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL-GFV------TQDFAKQIVDIEMEKQEPIIKVGNLEAVR  221 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT-TSH------HHHHHHHHHHHHTTSSCSEEEESCSSCEE
T ss_pred             CCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC-Cch------HHHHHHHHHHHhcCCCCCeEEeCCCCcEE
Confidence            47899999999999988643  8999999999999965532 111      1122222222   4  2223556777888


Q ss_pred             ceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          79 DMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        79 diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +.+.||.+++ ++.++.+.        .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       222 ~~v~v~Dva~a~~~~~~~~--------~~-g~~~~i~~~--~~~s~~e~~~~i~~~~g  268 (321)
T 2pk3_A          222 DFTDVRDIVQAYWLLSQYG--------KT-GDVYNVCSG--IGTRIQDVLDLLLAMAN  268 (321)
T ss_dssp             EEEEHHHHHHHHHHHHHHC--------CT-TCEEEESCS--CEEEHHHHHHHHHHHSS
T ss_pred             eeEEHHHHHHHHHHHHhCC--------CC-CCeEEeCCC--CCeeHHHHHHHHHHHhC
Confidence            9999999999 76665321        12 569999987  78999999999 87766

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.51  E-value=1.1e-07  Score=86.74  Aligned_cols=113  Identities=12%  Similarity=-0.054  Sum_probs=80.2

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcce-eeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVL-HTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l-~~~~~~~~~~~diVP   82 (300)
                      .+.|+.||+.+|+++.+..  .+++++|+||+.|+|....+  ++...  ....++.....|.. ....++++...|.|+
T Consensus       159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~~--~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~  234 (335)
T 1rpn_A          159 RSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI--EFVTR--KVTDAVARIKLGKQQELRLGNVDAKRDWGF  234 (335)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHHH--HHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCC--CcchH--HHHHHHHHHHcCCCceEEeCCCcceeceEE
Confidence            3689999999999998863  38999999999999854321  11100  01223333444542 234577788999999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.+++ ++.++.+         .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       235 v~Dva~a~~~~~~~---------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  276 (335)
T 1rpn_A          235 AGDYVEAMWLMLQQ---------DK-ADDYVVATG--VTTTVRDMCQIAFEHVG  276 (335)
T ss_dssp             HHHHHHHHHHHHHS---------SS-CCCEEECCS--CEEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhc---------CC-CCEEEEeCC--CCccHHHHHHHHHHHhC
Confidence            999999 7666521         12 469999987  78999999999 87766

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.49  E-value=1.9e-07  Score=87.19  Aligned_cols=114  Identities=10%  Similarity=-0.044  Sum_probs=82.6

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcce-eeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVL-HTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l-~~~~~~~~~~~diVP   82 (300)
                      .+.|..||+.+|+++.+..  .+++++|+||+.|+|....+..++.   .....++.....|.- -.++++++...+.|+
T Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  249 (379)
T 2c5a_A          173 QDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGRE---KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF  249 (379)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCC---CHHHHHHHHHHHCSSCEEEESCSCCEECCEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccc---cHHHHHHHHHHhCCCceEEeCCCCeeEEEEE
Confidence            3689999999999998763  3899999999999997665433221   112233434434432 235667788889999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.+++ ++.++.+         .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       250 v~Dva~ai~~~l~~---------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  291 (379)
T 2c5a_A          250 IDECVEGVLRLTKS---------DF-REPVNIGSD--EMVSMNEMAEMVLSFEE  291 (379)
T ss_dssp             HHHHHHHHHHHHHS---------SC-CSCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHhhc---------cC-CCeEEeCCC--CccCHHHHHHHHHHHhC
Confidence            999999 7666521         12 469999988  78999999999 87766

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.49  E-value=2.4e-07  Score=85.57  Aligned_cols=113  Identities=10%  Similarity=0.005  Sum_probs=81.6

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCc-cccee
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNT-VTDMV   81 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~-~~diV   81 (300)
                      .+.|..||+.+|+++.+..  .+++++|+||+.|+|....+. +   +..+.. .++.....|....+.++++. ..+.|
T Consensus       184 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  259 (357)
T 2x6t_A          184 LNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHK-G---SMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  259 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTC-G---GGSCHHHHHHHHHHTTCCCEEETTGGGCEECEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCC-c---ccchHHHHHHHHHHcCCCcEEeCCCCcceEccE
Confidence            4689999999999998874  379999999999998765431 1   111222 23333344443345566677 88999


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +||.+++ ++.++.+         .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       260 ~v~Dva~ai~~~~~~---------~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  302 (357)
T 2x6t_A          260 YVGDVADVNLWFLEN---------GV-SGIFNLGTG--RAESFQAVADATLAYHK  302 (357)
T ss_dssp             EHHHHHHHHHHHHHH---------CC-CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred             EHHHHHHHHHHHHhc---------CC-CCeEEecCC--CcccHHHHHHHHHHHcC
Confidence            9999999 7666521         12 469999987  78999999999 77766

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.47  E-value=3e-07  Score=84.03  Aligned_cols=121  Identities=16%  Similarity=0.092  Sum_probs=79.2

Q ss_pred             CcHHHHHHHHHHHHHHHhc---CCCCEEEecccEEeeccCCCccccccC--CCChHHHHHHHhhccee--eecc------
Q psy3027           6 PNTYTFTKALAEDVLCKEG---KGLPLAVLRPAVIVSTYREPVRGWIDN--VYGPIGMLVGIATGVLH--THLI------   72 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~---~~lPv~IvRPsiV~~~~~eP~pGw~d~--~~g~~~~~~~~~~G~l~--~~~~------   72 (300)
                      .+.|..||+.+|+++++..   .+++++|+||+.|+|.....+.|--+.  .......+.....|...  .+.+      
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  225 (338)
T 1udb_A          146 QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             CChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCC
Confidence            4789999999999998752   379999999999998654322232111  11223333333332111  1222      


Q ss_pred             CCCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          73 NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        73 ~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++...|.|.||++++ ++.++.....  .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~--~---~~-~~~yni~~~--~~~s~~e~~~~i~~~~g  281 (338)
T 1udb_A          226 DGTGVRDYIHVMDLADGHVVAMEKLAN--K---PG-VHIYNLGAG--VGNSVLDVVNAFSKACG  281 (338)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTT--C---CE-EEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred             CCceeeeeEEHHHHHHHHHHHHhhhhc--c---CC-CcEEEecCC--CceeHHHHHHHHHHHhC
Confidence            4566779999999999 7766532211  1   11 369999987  78999999999 77766

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.43  E-value=1.3e-06  Score=77.88  Aligned_cols=103  Identities=13%  Similarity=0.174  Sum_probs=73.4

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      |..|..||..+|+++++  .+++++|+||+.+.+..-   ++++         ......|...  ...++...+.++||.
T Consensus       114 ~~~y~~~K~~~E~~~~~--~~~~~~ilrp~~~~~~~~---~~~~---------~~~~~~~~~~--~~~~~~~~~~i~~~D  177 (287)
T 2jl1_A          114 IIPLAHVHLATEYAIRT--TNIPYTFLRNALYTDFFV---NEGL---------RASTESGAIV--TNAGSGIVNSVTRNE  177 (287)
T ss_dssp             CSTHHHHHHHHHHHHHH--TTCCEEEEEECCBHHHHS---SGGG---------HHHHHHTEEE--ESCTTCCBCCBCHHH
T ss_pred             CCchHHHHHHHHHHHHH--cCCCeEEEECCEeccccc---hhhH---------HHHhhCCcee--ccCCCCccCccCHHH
Confidence            56899999999999976  589999999998776321   1221         1112234332  334567789999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.+..       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       178 va~~~~~~~~~~~-------~~-g~~~~i~~~--~~~s~~e~~~~i~~~~g  218 (287)
T 2jl1_A          178 LALAAATVLTEEG-------HE-NKTYNLVSN--QPWTFDELAQILSEVSG  218 (287)
T ss_dssp             HHHHHHHHHTSSS-------CT-TEEEEECCS--SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhcCCC-------CC-CcEEEecCC--CcCCHHHHHHHHHHHHC
Confidence            999 666553211       23 569999987  78999999999 87766

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=98.42  E-value=5.7e-07  Score=79.99  Aligned_cols=102  Identities=12%  Similarity=0.113  Sum_probs=73.2

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      |+.|..||..+|+++++  .+++++|+||+.+.+..    .+++         ......|.+.  .++++...+.+.+|.
T Consensus       111 ~~~y~~sK~~~e~~~~~--~~~~~~ilrp~~~~~~~----~~~~---------~~~~~~~~~~--~~~~~~~~~~i~~~D  173 (286)
T 2zcu_A          111 PLGLADEHIETEKMLAD--SGIVYTLLRNGWYSENY----LASA---------PAALEHGVFI--GAAGDGKIASATRAD  173 (286)
T ss_dssp             CSTTHHHHHHHHHHHHH--HCSEEEEEEECCBHHHH----HTTH---------HHHHHHTEEE--ESCTTCCBCCBCHHH
T ss_pred             cchhHHHHHHHHHHHHH--cCCCeEEEeChHHhhhh----HHHh---------HHhhcCCcee--ccCCCCccccccHHH
Confidence            67899999999999976  48999999999876532    1111         1112234432  345677889999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.+..       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       174 va~~~~~~~~~~~-------~~-g~~~~i~~~--~~~s~~e~~~~i~~~~g  214 (286)
T 2zcu_A          174 YAAAAARVISEAG-------HE-GKVYELAGD--SAWTLTQLAAELTKQSG  214 (286)
T ss_dssp             HHHHHHHHHHSSS-------CT-TCEEEECCS--SCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhcCCC-------CC-CceEEEeCC--CcCCHHHHHHHHHHHHC
Confidence            999 766553211       23 579999987  78999999999 77766

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.39  E-value=1.1e-06  Score=78.97  Aligned_cols=106  Identities=11%  Similarity=0.046  Sum_probs=77.5

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.|..+|..+|........+++++|+||+.|+|...    |+..      -+......|.. ...++++...+.|.||++
T Consensus       130 ~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~----~~~~------~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dv  198 (298)
T 4b4o_A          130 DFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG----GAMG------HMLLPFRLGLG-GPIGSGHQFFPWIHIGDL  198 (298)
T ss_dssp             SHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTS----HHHH------HHHHHHHTTCC-CCBTTSCSBCCEEEHHHH
T ss_pred             chhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCC----Cchh------HHHHHHhcCCc-ceecccCceeecCcHHHH
Confidence            457788888887766556799999999999999542    2211      12223334443 345788999999999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |+ ++.++.+.        .. ..+||++++  +|+|+.|+.+. ++..+
T Consensus       199 a~a~~~~~~~~--------~~-~g~yn~~~~--~~~t~~e~~~~ia~~lg  237 (298)
T 4b4o_A          199 AGILTHALEAN--------HV-HGVLNGVAP--SSATNAEFAQTFGAALG  237 (298)
T ss_dssp             HHHHHHHHHCT--------TC-CEEEEESCS--CCCBHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCC--------CC-CCeEEEECC--CccCHHHHHHHHHHHhC
Confidence            99 76665321        12 459999988  89999999999 88777

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.38  E-value=3.8e-07  Score=82.15  Aligned_cols=117  Identities=12%  Similarity=0.005  Sum_probs=79.3

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHH-HhhcceeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG-IATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~-~~~G~l~~~~~~~~~~~diVP   82 (300)
                      .+.|..||+.+|+++.+..  .+++++|+||+.|+|....|-.+..   ......+.. ...|.. ...++++...|.|+
T Consensus       140 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~  215 (312)
T 2yy7_A          140 STVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKKY-ECFLSSETKMPMMY  215 (312)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSEE-EESSCTTCCEEEEE
T ss_pred             CchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCCe-EEecCCCceeeeee
Confidence            4789999999999998763  3899999999999997655432211   112233322 233433 34567788899999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.+++ ++.++.....  .  ... ..+||+++   .++|+.|+.+. .+...
T Consensus       216 v~Dva~a~~~~~~~~~~--~--~~~-~~~~ni~~---~~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          216 MDDAIDATINIMKAPVE--K--IKI-HSSYNLAA---MSFTPTEIANEIKKHIP  261 (312)
T ss_dssp             HHHHHHHHHHHHHSCGG--G--CCC-SSCEECCS---EEECHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHhCccc--c--ccc-CceEEeCC---CccCHHHHHHHHHHHCC
Confidence            999999 7666532111  0  011 36999974   47999999999 76654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.37  E-value=8.8e-07  Score=78.99  Aligned_cols=104  Identities=10%  Similarity=0.057  Sum_probs=75.2

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|+.||..+|+++++...  +++|+||+.|+|.....   +      ...++.....|..-.+.+  +...+.|+||.
T Consensus       127 ~~~Y~~sK~~~E~~~~~~~~--~~~ilR~~~v~G~~~~~---~------~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D  193 (287)
T 3sc6_A          127 INIYGASKYAGEQFVKELHN--KYFIVRTSWLYGKYGNN---F------VKTMIRLGKEREEISVVA--DQIGSPTYVAD  193 (287)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS--SEEEEEECSEECSSSCC---H------HHHHHHHHTTCSEEEEEC--SCEECCEEHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCC--CcEEEeeeeecCCCCCc---H------HHHHHHHHHcCCCeEeec--CcccCceEHHH
Confidence            37899999999999998754  78999999999965421   1      112233333343323333  47789999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.      .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       194 va~~~~~~~~------~---~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  232 (287)
T 3sc6_A          194 LNVMINKLIH------T---SL-YGTYHVSNT--GSCSWFEFAKKIFSYAN  232 (287)
T ss_dssp             HHHHHHHHHT------S---CC-CEEEECCCB--SCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHh------C---CC-CCeEEEcCC--CcccHHHHHHHHHHHcC
Confidence            999 766652      1   22 469999998  78999999999 87776

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.36  E-value=3.4e-07  Score=92.01  Aligned_cols=120  Identities=13%  Similarity=0.065  Sum_probs=83.8

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      |.|+.||+.+|+++.++.  .+++++|+||+.|+|....+..++.-+..+ ...++..+..|..-.+.++++...+.++|
T Consensus       461 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v  540 (660)
T 1z7e_A          461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  540 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEH
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEH
Confidence            479999999999998753  389999999999999876543221111111 12334444455544456677888899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCC-cccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARN-PISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~n-p~t~~~~~~~-~~~~~  134 (300)
                      |.+++ ++.++.....  .   .. ..+||++++  . ++|+.|+.+. .+..+
T Consensus       541 ~Dva~ai~~~l~~~~~--~---~~-g~~~ni~~~--~~~~s~~el~~~i~~~~g  586 (660)
T 1z7e_A          541 RDGIEALYRIIENAGN--R---CD-GEIINIGNP--ENEASIEELGEMLLASFE  586 (660)
T ss_dssp             HHHHHHHHHHHHCGGG--T---TT-TEEEEECCG--GGEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCccc--c---CC-CeEEEECCC--CCCcCHHHHHHHHHHHhc
Confidence            99999 7666532211  0   13 579999876  4 7999999999 77665

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.33  E-value=5.7e-07  Score=80.62  Aligned_cols=108  Identities=13%  Similarity=0.128  Sum_probs=76.0

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|+.||+.+|+++.+...  +++|+||+.|+|....   +++      ..++.....|..-...+  +...+.++||.
T Consensus       125 ~~~Y~~sK~~~E~~~~~~~~--~~~ilRp~~v~G~~~~---~~~------~~~~~~~~~~~~~~~~~--~~~~~~i~v~D  191 (299)
T 1n2s_A          125 LNVYGKTKLAGEKALQDNCP--KHLIFRTSWVYAGKGN---NFA------KTMLRLAKERQTLSVIN--DQYGAPTGAEL  191 (299)
T ss_dssp             SSHHHHHHHHHHHHHHHHCS--SEEEEEECSEECSSSC---CHH------HHHHHHHHHCSEEEEEC--SCEECCEEHHH
T ss_pred             ccHHHHHHHHHHHHHHHhCC--CeEEEeeeeecCCCcC---cHH------HHHHHHHhcCCCEEeec--CcccCCeeHHH
Confidence            47899999999999988753  9999999999986542   111      12333333443222333  47789999999


Q ss_pred             ccc-cccccccccCCCCCCCC-CCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRP-DPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~-~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.+...  .   . . ..+||++++  .++|++|+.+. .+..+
T Consensus       192 va~~~~~~~~~~~~--~---~~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  235 (299)
T 1n2s_A          192 LADCTAHAIRVALN--K---PEV-AGLYHLVAG--GTTTWHDYAALVFDEAR  235 (299)
T ss_dssp             HHHHHHHHHHHHHH--C---GGG-CEEEECCCB--SCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcc--c---ccc-CceEEEeCC--CCCCHHHHHHHHHHHhC
Confidence            999 7666533210  0   1 2 469999987  78999999999 77666

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.30  E-value=1.4e-06  Score=78.63  Aligned_cols=112  Identities=12%  Similarity=0.031  Sum_probs=77.6

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHh-hcceeeeccCCCcccceeccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIA-TGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~-~G~l~~~~~~~~~~~diVPVD   84 (300)
                      .+.|..||+.+|+++++.  +++++|+||+.|+|....+-.+++..      ++.... .|....+  .++...+.++||
T Consensus       130 ~~~Y~~sK~~~e~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~i~v~  199 (315)
T 2ydy_A          130 LNLYGKTKLDGEKAVLEN--NLGAAVLRIPILYGEVEKLEESAVTV------MFDKVQFSNKSANM--DHWQQRFPTHVK  199 (315)
T ss_dssp             CSHHHHHHHHHHHHHHHH--CTTCEEEEECSEECSCSSGGGSTTGG------GHHHHHCCSSCEEE--ECSSBBCCEEHH
T ss_pred             cCHHHHHHHHHHHHHHHh--CCCeEEEeeeeeeCCCCcccccHHHH------HHHHHHhcCCCeee--ccCceECcEEHH
Confidence            478999999999999887  47889999999998766532232221      222222 3332122  345677999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+++ ++.++.+.... .   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       200 Dva~a~~~~~~~~~~~-~---~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  244 (315)
T 2ydy_A          200 DVATVCRQLAEKRMLD-P---SI-KGTFHWSGN--EQMTKYEMACAIADAFN  244 (315)
T ss_dssp             HHHHHHHHHHHHHHTC-T---TC-CEEEECCCS--CCBCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhhccc-c---CC-CCeEEEcCC--CcccHHHHHHHHHHHhC
Confidence            9999 76665432110 1   23 579999988  78999999999 87766

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.28  E-value=1.1e-06  Score=79.27  Aligned_cols=110  Identities=19%  Similarity=0.114  Sum_probs=78.2

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeec-----cCCCccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHL-----INLNTVT   78 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~-----~~~~~~~   78 (300)
                      +.|..||+.+|++++...  .+++++|+||+.|+|....+..     -.+.. .++.....|....+.     ++++...
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  215 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHG-----EAGVVAIFAERVLKGLPVTLYARKTPGDEGCVR  215 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSS-----TTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCC-----cCcHHHHHHHHHHcCCCcEEEecccCCCCCeEE
Confidence            689999999999998763  3899999999999996543210     01111 122223334432344     6777788


Q ss_pred             ceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          79 DMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        79 diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+.||.+++ ++.++..          . ..+||++++  .++|+.|+.+. .+..+
T Consensus       216 ~~i~v~Dva~a~~~~~~~----------~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  260 (311)
T 2p5y_A          216 DYVYVGDVAEAHALALFS----------L-EGIYNVGTG--EGHTTREVLMAVAEAAG  260 (311)
T ss_dssp             CEEEHHHHHHHHHHHHHH----------C-CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred             eeEEHHHHHHHHHHHHhC----------C-CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence            9999999999 7666521          1 459999987  78999999999 77766

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.28  E-value=1.3e-06  Score=88.15  Aligned_cols=123  Identities=12%  Similarity=-0.008  Sum_probs=80.1

Q ss_pred             cHHHHHHHHHHHHHHHhc----CCCCEEEecccEEeeccCCCcccccc--CCCChHHHHHHHhhc--ceeeecc------
Q psy3027           7 NTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVSTYREPVRGWID--NVYGPIGMLVGIATG--VLHTHLI------   72 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~~~~eP~pGw~d--~~~g~~~~~~~~~~G--~l~~~~~------   72 (300)
                      +.|+.||+.+|+++++..    .+++++|+||+.|+|.....+.|--+  ........+.....|  ..-.+.+      
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  240 (699)
T 1z45_A          161 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSR  240 (699)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------C
T ss_pred             ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCC
Confidence            789999999999998762    58999999999999865322222100  011223333333332  1112333      


Q ss_pred             CCCcccceeccccccc-cccccccccC-CCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          73 NLNTVTDMVPSTVSDG-PSEGVWQKKF-PTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        73 ~~~~~~diVPVD~vvn-~i~aa~~~~~-~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++...|.|+||+||+ ++.++..... ...  ... ..+||++++  .++|+.|+.+. .+..+
T Consensus       241 ~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~--~~~-~~~yni~~~--~~~s~~el~~~i~~~~g  300 (699)
T 1z45_A          241 DGTPIRDYIHVVDLAKGHIAALQYLEAYNEN--EGL-CREWNLGSG--KGSTVFEVYHAFCKASG  300 (699)
T ss_dssp             CSSCEECEEEHHHHHHHHHHHHHHHHHSCTT--CCE-EEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred             CCCeeEeeEEHHHHHHHHHHHHhhhhccccc--cCC-ceEEEECCC--CCCcHHHHHHHHHHHhC
Confidence            5677889999999999 7766542110 000  022 469999988  78999999999 77766

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.26  E-value=1.6e-06  Score=79.35  Aligned_cols=102  Identities=16%  Similarity=0.130  Sum_probs=74.1

Q ss_pred             cHHHHHHHHHHHHHHH-hcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           7 NTYTFTKALAEDVLCK-EGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~-~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      +.|..||+.+|+++.. ..   +++|+||+.|+|..+.  .+.      ...++.....|.  .+.+ ++...+.++||.
T Consensus       161 ~~Y~~sK~~~E~~~~~s~~---~~~ilR~~~v~gp~~~--~~~------~~~~~~~~~~~~--~~~~-~~~~~~~i~v~D  226 (333)
T 2q1w_A          161 SSYAISKSANEDYLEYSGL---DFVTFRLANVVGPRNV--SGP------LPIFFQRLSEGK--KCFV-TKARRDFVFVKD  226 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTC---CEEEEEESEEESTTCC--SSH------HHHHHHHHHTTC--CCEE-EECEECEEEHHH
T ss_pred             CchHHHHHHHHHHHHhhhC---CeEEEeeceEECcCCc--CcH------HHHHHHHHHcCC--eeeC-CCceEeeEEHHH
Confidence            7999999999999988 65   9999999999985421  111      112333333444  3344 566789999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++..         .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       227 va~ai~~~~~~---------~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g  265 (333)
T 2q1w_A          227 LARATVRAVDG---------VG-HGAYHFSSG--TDVAIKELYDAVVEAMA  265 (333)
T ss_dssp             HHHHHHHHHTT---------CC-CEEEECSCS--CCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhc---------CC-CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence            999 7666521         22 469999987  78999999999 87766

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.25  E-value=1.2e-06  Score=81.40  Aligned_cols=112  Identities=13%  Similarity=-0.084  Sum_probs=79.3

Q ss_pred             cHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcce-eeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVL-HTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l-~~~~~~~~~~~diVPV   83 (300)
                      +.|+.||+.+|+++.....  +++++|+||+.++|....+  ++...  ....++.....|.. ....++++...|.|+|
T Consensus       178 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~--~~~~~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v  253 (375)
T 1t2a_A          178 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGA--NFVTR--KISRSVAKIYLGQLECFSLGNLDAKRDWGHA  253 (375)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHHH--HHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCC--CcchH--HHHHHHHHHHcCCCceeEeCCCCceeeeEEH
Confidence            6899999999999988642  8999999999998854321  12110  01122333334532 2345778888999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |++++ ++.++. .        .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       254 ~Dva~a~~~~~~-~--------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  294 (375)
T 1t2a_A          254 KDYVEAMWLMLQ-N--------DE-PEDFVIATG--EVHSVREFVEKSFLHIG  294 (375)
T ss_dssp             HHHHHHHHHHHH-S--------SS-CCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHh-c--------CC-CceEEEeCC--CcccHHHHHHHHHHHhC
Confidence            99999 766652 1        12 468999987  78999999999 87766

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.24  E-value=1.4e-06  Score=78.66  Aligned_cols=117  Identities=16%  Similarity=-0.005  Sum_probs=78.6

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHH-HhhcceeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG-IATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~-~~~G~l~~~~~~~~~~~diVP   82 (300)
                      .+.|..||+.+|+++..+.  .+++++|+||+.|+|+...|-.+..+   .....+.. ...|.. ...++++...|.|+
T Consensus       134 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~  209 (317)
T 3ajr_A          134 RTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTD---YAVEIFYYAVKREKY-KCYLAPNRALPMMY  209 (317)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSST---HHHHHHHHHHTTCCE-EECSCTTCCEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchh---HHHHHHHHHHhCCCc-eeecCccceeeeeE
Confidence            4789999999999998763  38999999999999876554322211   11222322 223433 34556778889999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.+++ ++.++..... ..   .. ..+||+++   .++|+.|+.+. .+...
T Consensus       210 v~Dva~a~~~~l~~~~~-~~---~~-g~~~~i~~---~~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          210 MPDALKALVDLYEADRD-KL---VL-RNGYNVTA---YTFTPSELYSKIKERIP  255 (317)
T ss_dssp             HHHHHHHHHHHHHCCGG-GC---SS-CSCEECCS---EEECHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCcc-cc---cc-CceEecCC---ccccHHHHHHHHHHHCC
Confidence            999999 7666532211 00   12 36999975   46999999999 76544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.23  E-value=1.9e-06  Score=79.60  Aligned_cols=113  Identities=13%  Similarity=-0.012  Sum_probs=79.8

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcce-eeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVL-HTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l-~~~~~~~~~~~diVP   82 (300)
                      .+.|+.||+.+|++++...  .+++++++||+.++|....+  ++..+  ....++.....|.. ....++++...|.|+
T Consensus       153 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  228 (372)
T 1db3_A          153 RSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGE--TFVTR--KITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (372)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHHH--HHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             CChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCC--cchhh--HHHHHHHHHHcCCCCceeecCCCceeeeeE
Confidence            4689999999999998764  38999999999988754421  11110  01122333344542 234577888899999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||++++ ++.++. .        .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       229 v~Dva~a~~~~~~-~--------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g  270 (372)
T 1db3_A          229 AKDYVKMQWMMLQ-Q--------EQ-PEDFVIATG--VQYSVRQFVEMAAAQLG  270 (372)
T ss_dssp             HHHHHHHHHHTTS-S--------SS-CCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHh-c--------CC-CceEEEcCC--CceeHHHHHHHHHHHhC
Confidence            999999 766652 1        12 468999987  78999999999 87766

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.22  E-value=2.6e-06  Score=77.85  Aligned_cols=105  Identities=12%  Similarity=0.085  Sum_probs=75.6

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|+.||+.+|++++..  +++.+|+||+.|+|...      -.++  ...++.....|.  ...++++ ..+.+.||.
T Consensus       157 ~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~------~~~~--~~~~~~~~~~~~--~~~~~~~-~~~~i~~~D  223 (330)
T 2pzm_A          157 FTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL------AIGP--IPTFYKRLKAGQ--KCFCSDT-VRDFLDMSD  223 (330)
T ss_dssp             CSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC------CSSH--HHHHHHHHHTTC--CCCEESC-EECEEEHHH
T ss_pred             CChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC------CCCH--HHHHHHHHHcCC--EEeCCCC-EecceeHHH
Confidence            478999999999999887  89999999999998432      0011  112233333443  3445556 789999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ .++.+...        .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       224 va~~a~~~~~~~--------~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g  263 (330)
T 2pzm_A          224 FLAIADLSLQEG--------RP-TGVFNVSTG--EGHSIKEVFDVVLDYVG  263 (330)
T ss_dssp             HHHHHHHHTSTT--------CC-CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhc--------CC-CCEEEeCCC--CCCCHHHHHHHHHHHhC
Confidence            998 76665422        12 469999987  78999999999 77766

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.19  E-value=2.2e-06  Score=79.72  Aligned_cols=111  Identities=15%  Similarity=-0.075  Sum_probs=78.9

Q ss_pred             CcHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCC--hHHHHHHHhhcce-eeeccCCCcccce
Q psy3027           6 PNTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYG--PIGMLVGIATGVL-HTHLINLNTVTDM   80 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g--~~~~~~~~~~G~l-~~~~~~~~~~~di   80 (300)
                      .+.|+.||+.+|+++.....  +++++++||+.++|...      .+++..  ...++.....|.. ....++++...+.
T Consensus       182 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~------~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          182 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRR------GENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTS------CTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCC------CCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            47899999999999988743  89999999998887432      222211  1122333334532 2345677888899


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++||.+++ ++.++.+         .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       256 v~v~Dva~a~~~~~~~---------~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  299 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQ---------EK-PDDYVVATE--EGHTVEEFLDVSFGYLG  299 (381)
T ss_dssp             EEHHHHHHHHHHHHTS---------SS-CCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred             EEHHHHHHHHHHHHhC---------CC-CCeEEeeCC--CCCcHHHHHHHHHHHcC
Confidence            99999999 7666521         12 469999988  78999999999 87766

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.18  E-value=3.2e-06  Score=75.46  Aligned_cols=103  Identities=12%  Similarity=0.027  Sum_probs=73.8

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|+.||+.+|+++++..  .+++|+||+.|+|. .+   +++      ..++.....|......+  +...+.++||.
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~--~~~~~lR~~~v~G~-~~---~~~------~~~~~~~~~~~~~~~~~--~~~~~~i~v~D  199 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALN--PKYYIVRTAWLYGD-GN---NFV------KTMINLGKTHDELKVVH--DQVGTPTSTVD  199 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHC--SSEEEEEECSEESS-SS---CHH------HHHHHHHHHCSEEEEES--SCEECCEEHHH
T ss_pred             ccHHHHHHHHHHHHHHhhC--CCeEEEeeeeeeCC-Cc---ChH------HHHHHHHhcCCcEEeec--CeeeCCccHHH
Confidence            4789999999999998875  37999999999986 32   211      12222233343222333  46789999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.+.         . ..+||++++  .++|+.|+.+. .+..+
T Consensus       200 va~~~~~~~~~~---------~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  238 (292)
T 1vl0_A          200 LARVVLKVIDEK---------N-YGTFHCTCK--GICSWYDFAVEIFRLTG  238 (292)
T ss_dssp             HHHHHHHHHHHT---------C-CEEEECCCB--SCEEHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcC---------C-CcEEEecCC--CCccHHHHHHHHHHHhC
Confidence            999 76665321         2 469999987  78999999999 77766

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.17  E-value=2.9e-06  Score=76.67  Aligned_cols=105  Identities=19%  Similarity=0.166  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCC-ccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           8 TYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREP-VRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP-~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      .|+.||+++|+++.++.  .+++++|+||+.|+|....+ ++.++       ..+.....|....+. +  ...+.++||
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~-------~~~~~~~~g~~~~~~-~--~~~~~i~v~  228 (322)
T 2p4h_X          159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSI-------EKALVLVLGKKEQIG-V--TRFHMVHVD  228 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHH-------HHHTHHHHSCGGGCC-E--EEEEEEEHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchH-------HHHHHHHhCCCccCc-C--CCcCEEEHH
Confidence            69999999999998763  58999999999999865432 11111       111111222211121 1  234899999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .|++ ++.++.+ .   .   .. + .|| +++  .++|+.|+.+. .+...
T Consensus       229 Dva~a~~~~~~~-~---~---~~-g-~~~-~~~--~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          229 DVARAHIYLLEN-S---V---PG-G-RYN-CSP--FIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHHHHHHHHHS-C---C---CC-E-EEE-CCC--EEEEHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHhhC-c---C---CC-C-CEE-EcC--CCCCHHHHHHHHHHhCC
Confidence            9999 7666521 1   1   22 3 588 454  67999999999 66543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.12  E-value=4.1e-06  Score=76.21  Aligned_cols=111  Identities=14%  Similarity=-0.079  Sum_probs=78.5

Q ss_pred             CcHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCC--hHHHHHHHhhcce-eeeccCCCcccce
Q psy3027           6 PNTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYG--PIGMLVGIATGVL-HTHLINLNTVTDM   80 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g--~~~~~~~~~~G~l-~~~~~~~~~~~di   80 (300)
                      .+.|+.||+.+|++++....  ++++++.||+.++|      ||+.++...  ....+.....|.. ....++++...|.
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~g------pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (345)
T 2z1m_A          148 RSPYAVAKLFGHWITVNYREAYNMFACSGILFNHES------PLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDW  221 (345)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEC------TTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECC
T ss_pred             CChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecC------CCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeee
Confidence            36899999999999988632  79999999999888      454443211  1112222334432 2245667778899


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +.||.+++ ++.++.   .      .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       222 ~~v~Dva~a~~~~~~---~------~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g  265 (345)
T 2z1m_A          222 GYAPEYVEAMWLMMQ---Q------PE-PDDYVIATG--ETHTVREFVEKAAKIAG  265 (345)
T ss_dssp             EEHHHHHHHHHHHHT---S------SS-CCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred             EEHHHHHHHHHHHHh---C------CC-CceEEEeCC--CCccHHHHHHHHHHHhC
Confidence            99999999 766652   1      12 459999987  78999999999 87766

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.09  E-value=3.2e-06  Score=77.74  Aligned_cols=111  Identities=16%  Similarity=0.153  Sum_probs=74.3

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CC-CCEEEecccEEeeccCCCccccccCCCChHHHHHHH--hhcceeeeccCC---Ccc
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KG-LPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGI--ATGVLHTHLINL---NTV   77 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~-lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~--~~G~l~~~~~~~---~~~   77 (300)
                      +|.|    +.+|+++.++.  .+ ++++|+||+.|+|....+...    ...+..++...  ..|....+++++   ...
T Consensus       151 ~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~  222 (364)
T 2v6g_A          151 MNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMN----LVGTLCVYAAICKHEGKVLRFTGCKAAWDGY  222 (364)
T ss_dssp             CCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSC----HHHHHHHHHHHHHHHTCCBCCCSCHHHHHSC
T ss_pred             chhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccc----hHHHHHHHHHHHHhcCCceecCCCccccccc
Confidence            5678    46899998863  34 999999999999976543211    00111223333  245433456655   355


Q ss_pred             cceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          78 TDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        78 ~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .++++||.+++ ++.++.+..       .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       223 ~~~~~v~Dva~a~~~~~~~~~-------~~-g~~~ni~~~--~~~s~~e~~~~i~~~~g  271 (364)
T 2v6g_A          223 SDCSDADLIAEHHIWAAVDPY-------AK-NEAFNVSNG--DVFKWKHFWKVLAEQFG  271 (364)
T ss_dssp             BCCEEHHHHHHHHHHHHHCGG-------GT-TEEEEECCS--CCBCHHHHHHHHHHHHT
T ss_pred             CCCCcHHHHHHHHHHHHhCCC-------CC-CceEEecCC--CcCCHHHHHHHHHHHhC
Confidence            78899999999 766653211       13 569999987  78999999999 87766

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.07  E-value=2.7e-06  Score=83.04  Aligned_cols=106  Identities=17%  Similarity=0.099  Sum_probs=74.0

Q ss_pred             CcHHHHHHHHHHHHHHHh-cCCCCEEEecccEEeeccCCCccccccCCCChHHHHH-HHhhcceeeeccCCCcccceecc
Q psy3027           6 PNTYTFTKALAEDVLCKE-GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLV-GIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~-~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~-~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .+.|..+|..+|+++... ..+++++|+||+.|+|...           +....+. .+..|.. ...++++...+.|+|
T Consensus       275 ~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~-----------~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v  342 (516)
T 3oh8_A          275 DDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG-----------GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAI  342 (516)
T ss_dssp             SSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB-----------SHHHHHHHTTC---C-CCCTTSCCEECEEEH
T ss_pred             cChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC-----------ChHHHHHHHHHhCCC-cccCCCCceEceEeH
Confidence            357899999999887655 4689999999999999542           1122222 1223332 356778889999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |++++ ++.++.+.        .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       343 ~Dva~ai~~~l~~~--------~~-~g~~ni~~~--~~~s~~el~~~i~~~~g  384 (516)
T 3oh8_A          343 DDLTDIYYRAIVDA--------QI-SGPINAVAP--NPVSNADMTKILATSMH  384 (516)
T ss_dssp             HHHHHHHHHHHHCT--------TC-CEEEEESCS--CCEEHHHHHHHTTC---
T ss_pred             HHHHHHHHHHHhCc--------cc-CCcEEEECC--CCCCHHHHHHHHHHHhC
Confidence            99999 76665321        12 459999998  88999999999 77665

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.07  E-value=6e-06  Score=75.87  Aligned_cols=107  Identities=12%  Similarity=-0.024  Sum_probs=75.1

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.|..||+.+|+++++  .++|++|+||+.+.+....   ++...    .   .....+-...++++++...+.|++|++
T Consensus       134 ~~y~~sK~~~e~~l~~--~g~~~tivrpg~~~g~~~~---~~~~~----~---~~~~~~~~~~~~g~g~~~~~~i~~~Dv  201 (346)
T 3i6i_A          134 LNMYREKRRVRQLVEE--SGIPFTYICCNSIASWPYY---NNIHP----S---EVLPPTDFFQIYGDGNVKAYFVAGTDI  201 (346)
T ss_dssp             HHHHHHHHHHHHHHHH--TTCCBEEEECCEESSCCCS---CC------------CCCCSSCEEEETTSCCCEEEECHHHH
T ss_pred             chHHHHHHHHHHHHHH--cCCCEEEEEecccccccCc---ccccc----c---cccCCCceEEEccCCCceEEecCHHHH
Confidence            6899999999999987  5899999999999885432   21110    0   000112223467788889999999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ ++.++.+..       .. .++||+++ ..+++|+.|+.+. .+..+
T Consensus       202 a~~~~~~l~~~~-------~~-~~~~~i~g-~~~~~s~~e~~~~~~~~~g  242 (346)
T 3i6i_A          202 GKFTMKTVDDVR-------TL-NKSVHFRP-SCNCLNINELASVWEKKIG  242 (346)
T ss_dssp             HHHHHHHTTCGG-------GT-TEEEECCC-GGGEECHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCcc-------cc-CeEEEEeC-CCCCCCHHHHHHHHHHHHC
Confidence            99 766653221       22 46888873 2278999999999 77766

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.05  E-value=4.2e-06  Score=76.05  Aligned_cols=112  Identities=13%  Similarity=0.081  Sum_probs=73.2

Q ss_pred             cHHHHHHHHHHHHHHHhc----CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceec
Q psy3027           7 NTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVP   82 (300)
                      +.|+.||+.+|+++....    .+++++|+||+.|.|....|...   . .....++.....|....+.++. ...+.++
T Consensus       174 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  248 (342)
T 1y1p_A          174 WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVS  248 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence            689999999999998763    37999999999999976654311   0 1122333333344322223333 4568999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.|++ ++.++.+..       .. +..+ ++++  .++|+.|+.+. .+...
T Consensus       249 v~Dva~a~~~~~~~~~-------~~-g~~~-~~~g--~~~s~~e~~~~i~~~~~  291 (342)
T 1y1p_A          249 AVDIGLLHLGCLVLPQ-------IE-RRRV-YGTA--GTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             HHHHHHHHHHHHHCTT-------CC-SCEE-EECC--EEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHcCcc-------cC-CceE-EEeC--CCCCHHHHHHHHHHHCC
Confidence            999999 766653211       12 3334 3455  67999999999 87766

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.03  E-value=7.2e-06  Score=74.87  Aligned_cols=116  Identities=14%  Similarity=-0.017  Sum_probs=77.3

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCC-C-hHHHHHHHhhcceeeeccCCCccccee
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVY-G-PIGMLVGIATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~-g-~~~~~~~~~~G~l~~~~~~~~~~~diV   81 (300)
                      .+.|..||+.+|+++.+..  .+++.+++||+.|++.     ||+.++.. + ...++.....|....++++++...+++
T Consensus       162 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~-----pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (342)
T 2hrz_A          162 LTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIR-----PGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHA  236 (342)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTC-----CSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEec-----CCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeE
Confidence            4689999999999998873  3799999999999862     33332211 1 122333333454334555667778899


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +||.+++ ++.++..... ..   .. ..+||++ +  .++|+.|+.+. .+..+
T Consensus       237 ~v~Dva~~~~~~~~~~~~-~~---~~-~~~~ni~-g--~~~s~~e~~~~i~~~~g  283 (342)
T 2hrz_A          237 SPRSAVGFLIHGAMIDVE-KV---GP-RRNLSMP-G--LSATVGEQIEALRKVAG  283 (342)
T ss_dssp             CHHHHHHHHHHHHHSCHH-HH---CS-CCEEECC-C--EEEEHHHHHHHHHHHHC
T ss_pred             ehHHHHHHHHHHHhcccc-cc---CC-ccEEEcC-C--CCCCHHHHHHHHHHHcC
Confidence            9999999 7666532110 00   12 4699994 4  57999999999 77766

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.98  E-value=1.1e-05  Score=74.61  Aligned_cols=104  Identities=11%  Similarity=0.003  Sum_probs=72.6

Q ss_pred             CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcc-eeeeccCCCcccc
Q psy3027           6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGV-LHTHLINLNTVTD   79 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~-l~~~~~~~~~~~d   79 (300)
                      .|.|+.||+.+|+++....     .+++++|+||+.|.|+....+|.          +......|. .-.+ .+++..-+
T Consensus       149 ~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~----------~~~~~~~g~~~~~i-~~~~~~r~  217 (344)
T 2gn4_A          149 INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPF----------FKKLVQNKASEIPI-TDIRMTRF  217 (344)
T ss_dssp             CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHH----------HHHHHHHTCCCEEE-SCTTCEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHH----------HHHHHHcCCCceEE-eCCCeEEe
Confidence            3789999999999998864     47999999999999865432222          222233443 1122 25666778


Q ss_pred             eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHH
Q psy3027          80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATV  132 (300)
Q Consensus        80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~  132 (300)
                      .+++|.+++ ++.++.. .       .. +.+|+++++   ++|+.|+.+. .+.
T Consensus       218 ~i~v~D~a~~v~~~l~~-~-------~~-g~~~~~~~~---~~s~~el~~~i~~~  260 (344)
T 2gn4_A          218 WITLDEGVSFVLKSLKR-M-------HG-GEIFVPKIP---SMKMTDLAKALAPN  260 (344)
T ss_dssp             EECHHHHHHHHHHHHHH-C-------CS-SCEEEECCC---EEEHHHHHHHHCTT
T ss_pred             eEEHHHHHHHHHHHHhh-c-------cC-CCEEecCCC---cEEHHHHHHHHHHh
Confidence            999999999 7766532 1       12 569998654   5899999998 543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.87  E-value=1.5e-05  Score=68.29  Aligned_cols=91  Identities=13%  Similarity=-0.054  Sum_probs=60.6

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|..||+.+|++++...  .+++++|+||+.|+|....+  +...           .+.+ .....+  + ..+.|.+|
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~~-----------~~~~-~~~~~~--~-~~~~i~~~  195 (227)
T 3dhn_A          133 NILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT--GRYR-----------LGKD-DMIVDI--V-GNSHISVE  195 (227)
T ss_dssp             GGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCC--CCCE-----------EESS-BCCCCT--T-SCCEEEHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccc--ccee-----------ecCC-CcccCC--C-CCcEEeHH
Confidence            679999999998887764  58999999999999865431  1110           0111 111111  2 26899999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHh
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWG  124 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~  124 (300)
                      .|++ ++.++.+..       .. .++||++++  .|.+|.
T Consensus       196 Dva~ai~~~l~~~~-------~~-g~~~~~~~~--~~~~~~  226 (227)
T 3dhn_A          196 DYAAAMIDELEHPK-------HH-QERFTIGYL--EHHHHH  226 (227)
T ss_dssp             HHHHHHHHHHHSCC-------CC-SEEEEEECC--SCCC--
T ss_pred             HHHHHHHHHHhCcc-------cc-CcEEEEEee--hhcccC
Confidence            9999 776663221       23 679999998  667775

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.84  E-value=7.4e-06  Score=76.01  Aligned_cols=110  Identities=6%  Similarity=-0.085  Sum_probs=73.3

Q ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCc-cccccCCCChHHHHHHHhhccee-eeccCCCcccceec
Q psy3027           5 WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPV-RGWIDNVYGPIGMLVGIATGVLH-THLINLNTVTDMVP   82 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~-pGw~d~~~g~~~~~~~~~~G~l~-~~~~~~~~~~diVP   82 (300)
                      -++.|..||+.+|+++++.  +++++|+||+++++.....+ +-+...         ....|... .++++++...+.|+
T Consensus       123 ~~~~y~~sK~~~E~~~~~~--gi~~~ivrpg~~g~~~~~~~~~~~~~~---------~~~~g~~~~~~~~~~~~~~~~i~  191 (352)
T 1xgk_A          123 PAVPMWAPKFTVENYVRQL--GLPSTFVYAGIYNNNFTSLPYPLFQME---------LMPDGTFEWHAPFDPDIPLPWLD  191 (352)
T ss_dssp             CCCTTTHHHHHHHHHHHTS--SSCEEEEEECEEGGGCBSSSCSSCBEE---------ECTTSCEEEEESSCTTSCEEEEC
T ss_pred             CCccHHHHHHHHHHHHHHc--CCCEEEEecceecCCchhccccccccc---------ccCCCceEEeeccCCCCceeeEe
Confidence            4688999999999999874  89999999997654322110 000000         00223332 34666788889999


Q ss_pred             c-ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 S-TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 V-D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      | |++++ ++.++.+...  .   .. ..+||+++   .++|+.|+.+. .+..+
T Consensus       192 v~~Dva~ai~~~l~~~~~--~---~~-g~~~~l~~---~~~s~~e~~~~i~~~~G  237 (352)
T 1xgk_A          192 AEHDVGPALLQIFKDGPQ--K---WN-GHRIALTF---ETLSPVQVCAAFSRALN  237 (352)
T ss_dssp             HHHHHHHHHHHHHHHCHH--H---HT-TCEEEECS---EEECHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHhCCch--h---hC-CeEEEEec---CCCCHHHHHHHHHHHHC
Confidence            9 99999 7666532110  0   12 56999984   46999999999 87766

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.80  E-value=2e-05  Score=67.44  Aligned_cols=87  Identities=13%  Similarity=0.091  Sum_probs=64.6

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|..||+.+|++++ ...+++++|+||+.|.+...+   |.                  +.    .++...+.+++|.
T Consensus       123 ~~~Y~~sK~~~e~~~~-~~~~i~~~ilrp~~v~g~~~~---~~------------------~~----~~~~~~~~i~~~D  176 (219)
T 3dqp_A          123 LKDYYIAKHFADLYLT-KETNLDYTIIQPGALTEEEAT---GL------------------ID----INDEVSASNTIGD  176 (219)
T ss_dssp             THHHHHHHHHHHHHHH-HSCCCEEEEEEECSEECSCCC---SE------------------EE----ESSSCCCCEEHHH
T ss_pred             ccHHHHHHHHHHHHHH-hccCCcEEEEeCceEecCCCC---Cc------------------cc----cCCCcCCcccHHH
Confidence            5789999999999997 456899999999999985432   11                  11    1256678999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL  129 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~  129 (300)
                      +++ ++.++.+..       .. ..+||++++   +.+++|+.+.
T Consensus       177 va~~i~~~l~~~~-------~~-g~~~~i~~g---~~~~~e~~~~  210 (219)
T 3dqp_A          177 VADTIKELVMTDH-------SI-GKVISMHNG---KTAIKEALES  210 (219)
T ss_dssp             HHHHHHHHHTCGG-------GT-TEEEEEEEC---SEEHHHHHHT
T ss_pred             HHHHHHHHHhCcc-------cc-CcEEEeCCC---CccHHHHHHH
Confidence            999 766663221       23 579999886   4789888765

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.70  E-value=4.3e-05  Score=66.10  Aligned_cols=99  Identities=14%  Similarity=0.123  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccccc
Q psy3027           8 TYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSD   87 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vv   87 (300)
                      .|..||+.+|+++++  .+++++++||+.|.+...... ..+.+              ....+..   ...+.+++|.++
T Consensus       150 ~y~~sK~~~e~~~~~--~~i~~~~vrpg~v~~~~~~~~-~~~~~--------------~~~~~~~---~~~~~~~~~Dva  209 (253)
T 1xq6_A          150 NILVWKRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVR-ELLVG--------------KDDELLQ---TDTKTVPRADVA  209 (253)
T ss_dssp             CHHHHHHHHHHHHHT--SSSCEEEEEECEEECSCSSSS-CEEEE--------------STTGGGG---SSCCEEEHHHHH
T ss_pred             hHHHHHHHHHHHHHh--CCCceEEEecceeecCCcchh-hhhcc--------------CCcCCcC---CCCcEEcHHHHH
Confidence            477899999999976  589999999999998653211 01100              0001111   124589999999


Q ss_pred             c-cccccccccCCCCCCCCCCCcEEEeeCCCC-CcccHhHHHHH-HHHcC
Q psy3027          88 G-PSEGVWQKKFPTSVFRPDPIPIYNFVGSAR-NPISWGKLDEL-ATVCH  134 (300)
Q Consensus        88 n-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~-np~t~~~~~~~-~~~~~  134 (300)
                      + ++.++.+..       .. ..+||++++.. .++|+.|+.+. .+..+
T Consensus       210 ~~~~~~~~~~~-------~~-g~~~~i~~~~~~~~~s~~e~~~~~~~~~g  251 (253)
T 1xq6_A          210 EVCIQALLFEE-------AK-NKAFDLGSKPEGTSTPTKDFKALFSQVTS  251 (253)
T ss_dssp             HHHHHHTTCGG-------GT-TEEEEEEECCTTTSCCCCCHHHHHHTCCC
T ss_pred             HHHHHHHcCcc-------cc-CCEEEecCCCcCCCCCHHHHHHHHHHHhC
Confidence            9 766653211       23 56999998743 57999999999 76654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.68  E-value=3.7e-05  Score=66.57  Aligned_cols=89  Identities=18%  Similarity=0.189  Sum_probs=64.7

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|..||+.+|+++++  .+++++|+||+.|.+...+                     |... ...+.+...+.+++|.
T Consensus       144 ~~~Y~~sK~~~e~~~~~--~gi~~~~lrpg~v~~~~~~---------------------~~~~-~~~~~~~~~~~i~~~D  199 (236)
T 3e8x_A          144 MRHYLVAKRLADDELKR--SSLDYTIVRPGPLSNEEST---------------------GKVT-VSPHFSEITRSITRHD  199 (236)
T ss_dssp             GHHHHHHHHHHHHHHHH--SSSEEEEEEECSEECSCCC---------------------SEEE-EESSCSCCCCCEEHHH
T ss_pred             hhhHHHHHHHHHHHHHH--CCCCEEEEeCCcccCCCCC---------------------CeEE-eccCCCcccCcEeHHH
Confidence            46899999999999984  5899999999999885431                     1111 1123344578999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL  129 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~  129 (300)
                      +++ ++.++.+..       .. ..+||++++   +.+++|+.+.
T Consensus       200 va~~~~~~~~~~~-------~~-g~~~~v~~~---~~~~~e~~~~  233 (236)
T 3e8x_A          200 VAKVIAELVDQQH-------TI-GKTFEVLNG---DTPIAKVVEQ  233 (236)
T ss_dssp             HHHHHHHHTTCGG-------GT-TEEEEEEEC---SEEHHHHHHT
T ss_pred             HHHHHHHHhcCcc-------cc-CCeEEEeCC---CcCHHHHHHH
Confidence            999 766653221       23 579999886   4899998875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.67  E-value=4.7e-05  Score=66.92  Aligned_cols=98  Identities=14%  Similarity=0.031  Sum_probs=68.7

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|+.||+.+|++++.    ++.+++||+.|+|  .+++..         .++.....|......+  + ..+.+++|.
T Consensus       127 ~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~G--~~~~~~---------~~~~~~~~~~~~~~~~--~-~~~~~~~~d  188 (273)
T 2ggs_A          127 INYYGLSKLLGETFALQ----DDSLIIRTSGIFR--NKGFPI---------YVYKTLKEGKTVFAFK--G-YYSPISARK  188 (273)
T ss_dssp             SSHHHHHHHHHHHHHCC----TTCEEEEECCCBS--SSSHHH---------HHHHHHHTTCCEEEES--C-EECCCBHHH
T ss_pred             CCHHHHHHHHHHHHHhC----CCeEEEecccccc--ccHHHH---------HHHHHHHcCCCEEeec--C-CCCceEHHH
Confidence            47899999999999976    7899999999997  222211         1222233343222332  2 678999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ ++.++.+ .       .  ..+||+++   .++|++|+.+. .+..+
T Consensus       189 va~~i~~~~~~-~-------~--~g~~~i~~---~~~s~~e~~~~~~~~~g  226 (273)
T 2ggs_A          189 LASAILELLEL-R-------K--TGIIHVAG---ERISRFELALKIKEKFN  226 (273)
T ss_dssp             HHHHHHHHHHH-T-------C--CEEEECCC---CCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhc-C-------c--CCeEEECC---CcccHHHHHHHHHHHhC
Confidence            999 7666531 1       1  34999975   67999999999 88776

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.67  E-value=1.3e-05  Score=67.94  Aligned_cols=91  Identities=13%  Similarity=0.073  Sum_probs=61.6

Q ss_pred             CCcHHHHHHHHHHHHHHHhcCCCC-EEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           5 WPNTYTFTKALAEDVLCKEGKGLP-LAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~~~lP-v~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      -++.|..||+.+|+++++.  +++ ++|+||+.|.|...+  +.+.+.+.+          .... + .+  ...+.+++
T Consensus       121 ~~~~y~~sK~~~e~~~~~~--~~~~~~~vrp~~v~g~~~~--~~~~~~~~~----------~~~~-~-~~--~~~~~i~~  182 (215)
T 2a35_A          121 SSIFYNRVKGELEQALQEQ--GWPQLTIARPSLLFGPREE--FRLAEILAA----------PIAR-I-LP--GKYHGIEA  182 (215)
T ss_dssp             CSSHHHHHHHHHHHHHTTS--CCSEEEEEECCSEESTTSC--EEGGGGTTC----------CCC--------CHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHc--CCCeEEEEeCceeeCCCCc--chHHHHHHH----------hhhh-c-cC--CCcCcEeH
Confidence            4679999999999999864  899 999999999987654  234333321          1111 1 11  25689999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhH
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGK  125 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~  125 (300)
                      |.+++ ++.++.      .   .. ..+||++++  .++++++
T Consensus       183 ~Dva~~~~~~~~------~---~~-~~~~~i~~~--~~~~~~~  213 (215)
T 2a35_A          183 CDLARALWRLAL------E---EG-KGVRFVESD--ELRKLGK  213 (215)
T ss_dssp             HHHHHHHHHHHT------C---CC-SEEEEEEHH--HHHHHHH
T ss_pred             HHHHHHHHHHHh------c---CC-CCceEEcHH--HHHHhhc
Confidence            99999 766652      1   22 569999976  5555543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.61  E-value=8.6e-05  Score=66.45  Aligned_cols=106  Identities=8%  Similarity=-0.060  Sum_probs=71.7

Q ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcce-eeeccCCCcccceecc
Q psy3027           5 WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVL-HTHLINLNTVTDMVPS   83 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l-~~~~~~~~~~~diVPV   83 (300)
                      .++.|..||+.+|+++++.  ++|++|+||+.+.+....   .+....         ...|.. ......++...+.|.+
T Consensus       126 ~~~~y~~sK~~~e~~~~~~--gi~~~ilrp~~~~~~~~~---~~~~~~---------~~~g~~~~~~~~~~~~~~~~i~~  191 (299)
T 2wm3_A          126 LAAAHFDGKGEVEEYFRDI--GVPMTSVRLPCYFENLLS---HFLPQK---------APDGKSYLLSLPTGDVPMDGMSV  191 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHH--TCCEEEEECCEEGGGGGT---TTCCEE---------CTTSSSEEECCCCTTSCEEEECG
T ss_pred             ccCchhhHHHHHHHHHHHC--CCCEEEEeecHHhhhchh---hcCCcc---------cCCCCEEEEEecCCCCccceecH
Confidence            4689999999999999874  799999999999885332   122111         011210 1111236677899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ +..++.+...      .. ..+||+++   .++|+.|+.+. .+..+
T Consensus       192 ~Dva~~~~~~l~~~~~------~~-g~~~~~~g---~~~s~~e~~~~~~~~~g  234 (299)
T 2wm3_A          192 SDLGPVVLSLLKMPEK------YV-GQNIGLST---CRHTAEEYAALLTKHTR  234 (299)
T ss_dssp             GGHHHHHHHHHHSHHH------HT-TCEEECCS---EEECHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcChhh------hC-CeEEEeee---ccCCHHHHHHHHHHHHC
Confidence            99999 6655532110      12 46999874   36999999999 77766

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.54  E-value=7.4e-05  Score=67.10  Aligned_cols=107  Identities=7%  Similarity=-0.031  Sum_probs=70.8

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.| .||+.+|+++++  .++|++|+||+.+++.....+....+ ...       ...+.+ .++++++...+.|.+|.+
T Consensus       133 ~~y-~sK~~~e~~~~~--~g~~~~ilrp~~~~~~~~~~~~~~~~-~~~-------~~~~~~-~~~~~g~~~~~~i~~~Dv  200 (313)
T 1qyd_A          133 ITF-IDKRKVRRAIEA--ASIPYTYVSSNMFAGYFAGSLAQLDG-HMM-------PPRDKV-LIYGDGNVKGIWVDEDDV  200 (313)
T ss_dssp             HHH-HHHHHHHHHHHH--TTCCBCEEECCEEHHHHTTTSSCTTC-CSS-------CCSSEE-CCBTTSCSEEEEECHHHH
T ss_pred             chH-HHHHHHHHHHHh--cCCCeEEEEeceeccccccccccccc-ccc-------CCCCeE-EEeCCCCceEEEEEHHHH
Confidence            468 999999999976  47999999999998754321111100 000       011222 355677888999999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ ++.++.+..       .. ..+|+++++ .+++|+.|+.+. .+..+
T Consensus       201 a~~~~~~l~~~~-------~~-~~~~~~~g~-~~~~s~~e~~~~~~~~~g  241 (313)
T 1qyd_A          201 GTYTIKSIDDPQ-------TL-NKTMYIRPP-MNILSQKEVIQIWERLSE  241 (313)
T ss_dssp             HHHHHHHTTCGG-------GS-SSEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCcc-------cC-CceEEEeCC-CCccCHHHHHHHHHHhcC
Confidence            99 666553211       12 457776642 157999999999 87766

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=97.52  E-value=7.8e-05  Score=67.84  Aligned_cols=105  Identities=13%  Similarity=0.060  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHH--HhhcceeeeccCCCcccceecc
Q psy3027           8 TYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG--IATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~--~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .|..||+++|+++.++.  .+++++|+||+.|+|....+.      +.  ..+...  ...|.-. ..... ...+.+.|
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~------~~--~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v  231 (337)
T 2c29_D          162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS------MP--PSLITALSPITGNEA-HYSII-RQGQFVHL  231 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS------CC--HHHHHHTHHHHTCGG-GHHHH-TEEEEEEH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CC--chHHHHHHHHcCCCc-ccccc-CCCCEEEH
Confidence            69999999999998763  489999999999999654321      11  111110  0111100 11110 12348999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.|++ ++.++.+ .       .. ..+|++++   ..+|+.|+.+. .+...
T Consensus       232 ~Dva~a~~~~~~~-~-------~~-~~~~~~~~---~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          232 DDLCNAHIYLFEN-P-------KA-EGRYICSS---HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHHHHHHHHHHHC-T-------TC-CEEEEECC---EEEEHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHhcC-c-------cc-CceEEEeC---CCCCHHHHHHHHHHHCC
Confidence            99999 7665521 1       11 34786644   35899999999 76543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=97.52  E-value=1.5e-05  Score=72.57  Aligned_cols=108  Identities=16%  Similarity=0.104  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCC-ccccccCCCChHHHHHHHhhcceeeec-c----CCCcccc
Q psy3027           8 TYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREP-VRGWIDNVYGPIGMLVGIATGVLHTHL-I----NLNTVTD   79 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP-~pGw~d~~~g~~~~~~~~~~G~l~~~~-~----~~~~~~d   79 (300)
                      .|..||+++|+++.++.  .+++++|+||+.|+|....+ ++..+       ..+.....|.-..+. +    ..+...|
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~  239 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSI-------GLAMSLITGNEFLINGMKGMQMLSGSVS  239 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHH-------HHHHHHHHTCHHHHHHHHHHHHHHSSEE
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchH-------HHHHHHHcCCccccccccccccccCccc
Confidence            49999999999998763  38999999999999976543 12111       111111111100000 0    0112348


Q ss_pred             eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +|.||.|++ ++.++.. .       .. ..+|++++   ..+|+.|+.+. .+...
T Consensus       240 ~i~v~Dva~a~~~~~~~-~-------~~-~~~~~~~~---~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          240 IAHVEDVCRAHIFVAEK-E-------SA-SGRYICCA---ANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             EEEHHHHHHHHHHHHHC-T-------TC-CEEEEECS---EEECHHHHHHHHHHHCT
T ss_pred             EEEHHHHHHHHHHHHcC-C-------Cc-CCcEEEec---CCCCHHHHHHHHHHhCC
Confidence            999999999 7666521 1       12 34788764   35899999999 76544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.47  E-value=0.00015  Score=64.85  Aligned_cols=106  Identities=12%  Similarity=0.028  Sum_probs=70.8

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.| .||+.+|+.+++.  ++|++|+||+.+.+.....+.....  ..       ...+.+ .++++++...+.+++|.+
T Consensus       129 ~~y-~sK~~~e~~~~~~--~~~~~~~r~~~~~~~~~~~~~~~~~--~~-------~~~~~~-~~~~~~~~~~~~i~~~Dv  195 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIEAE--GIPYTYVSSNCFAGYFLRSLAQAGL--TA-------PPRDKV-VILGDGNARVVFVKEEDI  195 (308)
T ss_dssp             HHH-HHHHHHHHHHHHH--TCCBEEEECCEEHHHHTTTTTCTTC--SS-------CCSSEE-EEETTSCCEEEEECHHHH
T ss_pred             hHH-HHHHHHHHHHHhc--CCCeEEEEeceeccccccccccccc--cC-------CCCCce-EEecCCCceEEEecHHHH
Confidence            468 9999999999764  7999999999998754321111000  00       011222 356678888999999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ ++.++.+..       .. ..+|+++++ .+++|++|+.+. .+..+
T Consensus       196 a~~~~~~l~~~~-------~~-~~~~~~~g~-~~~~s~~e~~~~~~~~~g  236 (308)
T 1qyc_A          196 GTFTIKAVDDPR-------TL-NKTLYLRLP-ANTLSLNELVALWEKKID  236 (308)
T ss_dssp             HHHHHTTSSCGG-------GT-TEEEECCCG-GGEEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCcc-------cc-CeEEEEeCC-CCccCHHHHHHHHHHHhC
Confidence            99 665553211       12 457777642 157999999999 87766

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.33  E-value=0.00024  Score=63.46  Aligned_cols=106  Identities=12%  Similarity=0.016  Sum_probs=69.8

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.| .||+.+|+.+++.  ++|++|+||+.+.+...   +++.....      .....+.+ .++++++...+.+.+|.+
T Consensus       128 ~~y-~sK~~~e~~~~~~--~i~~~~lrp~~~~~~~~---~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~i~~~Dv  194 (307)
T 2gas_A          128 QVF-EEKASIRRVIEAE--GVPYTYLCCHAFTGYFL---RNLAQLDA------TDPPRDKV-VILGDGNVKGAYVTEADV  194 (307)
T ss_dssp             HHH-HHHHHHHHHHHHH--TCCBEEEECCEETTTTG---GGTTCTTC------SSCCSSEE-EEETTSCSEEEEECHHHH
T ss_pred             hHH-HHHHHHHHHHHHc--CCCeEEEEcceeecccc---cccccccc------ccCCCCeE-EEecCCCcceEEeeHHHH
Confidence            478 9999999999764  79999999999887432   22111100      00011222 345677888999999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ ++.++.+..       .. ..+|+++++ .+++|++|+.+. .+..+
T Consensus       195 a~~~~~~l~~~~-------~~-~~~~~~~~~-~~~~s~~e~~~~~~~~~g  235 (307)
T 2gas_A          195 GTFTIRAANDPN-------TL-NKAVHIRLP-KNYLTQNEVIALWEKKIG  235 (307)
T ss_dssp             HHHHHHHHTCGG-------GT-TEEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCcc-------cc-CceEEEeCC-CCcCCHHHHHHHHHHHhC
Confidence            99 666553211       12 456766542 157999999999 77766

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.27  E-value=0.00015  Score=65.42  Aligned_cols=106  Identities=9%  Similarity=-0.056  Sum_probs=70.0

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.| .||+.+|+++++.  +++++|+||+.+++....   .......      .....+.+ ...++++...+.+.+|.+
T Consensus       129 ~~y-~sK~~~e~~~~~~--~~~~~~lrp~~~~~~~~~---~~~~~~~------~~~~~~~~-~~~~~~~~~~~~i~~~Dv  195 (321)
T 3c1o_A          129 SVL-EKKRIIRRAIEAA--ALPYTYVSANCFGAYFVN---YLLHPSP------HPNRNDDI-VIYGTGETKFVLNYEEDI  195 (321)
T ss_dssp             HHH-HHHHHHHHHHHHH--TCCBEEEECCEEHHHHHH---HHHCCCS------SCCTTSCE-EEETTSCCEEEEECHHHH
T ss_pred             hHH-HHHHHHHHHHHHc--CCCeEEEEeceecccccc---ccccccc------cccccCce-EEecCCCcceeEeeHHHH
Confidence            468 9999999999763  799999999998874221   1110000      00011222 345677888999999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ ++.++.+..       .. ..+|+++++ ..++|++|+.+. .+..+
T Consensus       196 a~~~~~~l~~~~-------~~-g~~~~~~g~-~~~~t~~e~~~~~~~~~g  236 (321)
T 3c1o_A          196 AKYTIKVACDPR-------CC-NRIVIYRPP-KNIISQNELISLWEAKSG  236 (321)
T ss_dssp             HHHHHHHHHCGG-------GT-TEEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCcc-------cc-CeEEEEeCC-CCcccHHHHHHHHHHHcC
Confidence            99 665553211       12 467777642 157999999999 87766

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.14  E-value=0.00037  Score=59.27  Aligned_cols=85  Identities=5%  Similarity=-0.081  Sum_probs=55.7

Q ss_pred             CcHHHHHHHHHHHHHHHh-cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           6 PNTYTFTKALAEDVLCKE-GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~-~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      .+.|..||+.+|.+.... ..+++++|+||+.|.+.  .+..|+...            ...   +. .++...+.|.+|
T Consensus       129 ~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~--~~~~~~~~~------------~~~---~~-~~~~~~~~i~~~  190 (224)
T 3h2s_A          129 QPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS--GPATSYVAG------------KDT---LL-VGEDGQSHITTG  190 (224)
T ss_dssp             STTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCCC--CCCCCEEEE------------SSB---CC-CCTTSCCBCCHH
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccCC--CcccCceec------------ccc---cc-cCCCCCceEeHH
Confidence            478999999999764332 46999999999999976  222332110            011   11 123445889999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGS  116 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~  116 (300)
                      .|++ ++.++.+..       .. .++|++++.
T Consensus       191 DvA~~~~~~l~~~~-------~~-g~~~~~~~~  215 (224)
T 3h2s_A          191 NMALAILDQLEHPT-------AI-RDRIVVRDA  215 (224)
T ss_dssp             HHHHHHHHHHHSCC-------CT-TSEEEEEEC
T ss_pred             HHHHHHHHHhcCcc-------cc-CCEEEEecC
Confidence            9999 776663221       23 579999875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.07  E-value=0.00032  Score=63.26  Aligned_cols=103  Identities=9%  Similarity=-0.080  Sum_probs=68.6

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.| .||+.+|+++++  .++|++|+||+.+.+..-   +.+....         ...+.. .++++++...+.+.+|.+
T Consensus       131 ~~y-~sK~~~e~~~~~--~~~~~~~lr~~~~~~~~~---~~~~~~~---------~~~~~~-~~~~~~~~~~~~i~~~Dv  194 (318)
T 2r6j_A          131 ALI-ERKRMIRRAIEE--ANIPYTYVSANCFASYFI---NYLLRPY---------DPKDEI-TVYGTGEAKFAMNYEQDI  194 (318)
T ss_dssp             HHH-HHHHHHHHHHHH--TTCCBEEEECCEEHHHHH---HHHHCTT---------CCCSEE-EEETTSCCEEEEECHHHH
T ss_pred             hhH-HHHHHHHHHHHh--cCCCeEEEEcceehhhhh---hhhcccc---------CCCCce-EEecCCCceeeEeeHHHH
Confidence            358 999999999976  479999999998875311   1111100         011222 355677888999999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ ++.++.+..       .. ..+|+++++ .+++|+.|+.+. .+..+
T Consensus       195 a~~~~~~l~~~~-------~~-~~~~~~~g~-~~~~s~~e~~~~~~~~~g  235 (318)
T 2r6j_A          195 GLYTIKVATDPR-------AL-NRVVIYRPS-TNIITQLELISRWEKKIG  235 (318)
T ss_dssp             HHHHHHHTTCGG-------GT-TEEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHhcCcc-------cc-CeEEEecCC-CCccCHHHHHHHHHHHhC
Confidence            99 665553211       12 457776532 157999999999 77766

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.96  E-value=0.00018  Score=61.00  Aligned_cols=92  Identities=10%  Similarity=0.034  Sum_probs=48.3

Q ss_pred             cHHHHHHHHHHHH--HHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDV--LCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~l--v~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|..+|..+|.+  +.++..+++++|+||+.|.+.  .+..|..          . .+...+ ...+++   .+.|.+|
T Consensus       126 ~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~--~~~~~~~----------~-~~~~~~-~~~~~~---~~~i~~~  188 (221)
T 3ew7_A          126 PYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP--GERTGDY----------Q-IGKDHL-LFGSDG---NSFISME  188 (221)
T ss_dssp             CCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCC--C------------------------------------CCCHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecC--CCccCce----------E-eccccc-eecCCC---CceEeHH
Confidence            4489999999998  333256899999999999875  2222210          0 011111 111222   2578899


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhH
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGK  125 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~  125 (300)
                      .|++ ++.++.+..       .. .++||++++  ++.+..|
T Consensus       189 Dva~~~~~~l~~~~-------~~-g~~~~~~~~--~~~~~~~  220 (221)
T 3ew7_A          189 DYAIAVLDEIERPN-------HL-NEHFTVAGK--LEHHHHH  220 (221)
T ss_dssp             HHHHHHHHHHHSCS-------CT-TSEEECCC----------
T ss_pred             HHHHHHHHHHhCcc-------cc-CCEEEECCC--Ccccccc
Confidence            9999 776663221       23 679999987  5545443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.88  E-value=0.0018  Score=57.29  Aligned_cols=96  Identities=8%  Similarity=0.007  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-c
Q psy3027          11 FTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-P   89 (300)
Q Consensus        11 ~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-~   89 (300)
                      ..+..+|+.+.+  .+++++|+||+.+.+.    +.+|+.         .....+..  ....++...+.|.+|.+++ +
T Consensus       119 ~~~~~~e~~~~~--~g~~~~ilrp~~~~~~----~~~~~~---------~~~~~~~~--~~~~g~~~~~~i~~~Dva~~~  181 (289)
T 3e48_A          119 PYFGYASRLLST--SGIDYTYVRMAMYMDP----LKPYLP---------ELMNMHKL--IYPAGDGRINYITRNDIARGV  181 (289)
T ss_dssp             HHHHHHHHHHHH--HCCEEEEEEECEESTT----HHHHHH---------HHHHHTEE--CCCCTTCEEEEECHHHHHHHH
T ss_pred             hhHHHHHHHHHH--cCCCEEEEeccccccc----cHHHHH---------HHHHCCCE--ecCCCCceeeeEEHHHHHHHH
Confidence            334566776664  4899999999998763    222211         11223332  3345678889999999999 6


Q ss_pred             ccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          90 SEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        90 i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +.++.+..       .. ..+||++ +  .++|+.|+.+. .+..+
T Consensus       182 ~~~l~~~~-------~~-g~~~~~~-~--~~~s~~e~~~~~~~~~g  216 (289)
T 3e48_A          182 IAIIKNPD-------TW-GKRYLLS-G--YSYDMKELAAILSEASG  216 (289)
T ss_dssp             HHHHHCGG-------GT-TCEEEEC-C--EEEEHHHHHHHHHHHHT
T ss_pred             HHHHcCCC-------cC-CceEEeC-C--CcCCHHHHHHHHHHHHC
Confidence            66653221       22 5699999 7  78999999999 87766

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=96.86  E-value=0.00022  Score=62.80  Aligned_cols=83  Identities=12%  Similarity=0.086  Sum_probs=57.7

Q ss_pred             cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|..||+.+|++++..  ..+++++|+||+.|+++   |.                           +++...+.+++|
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~---~~---------------------------~~~~~~~~~~~~  182 (267)
T 3ay3_A          133 SLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK---PK---------------------------DARMMATWLSVD  182 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSS---CC---------------------------SHHHHHHBCCHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCC---CC---------------------------CCCeeeccccHH
Confidence            78999999999999875  35899999999998742   21                           111234789999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL  129 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~  129 (300)
                      .+++ ++.++.. .   .   .. ..+||.+++  ++.+|.++.+.
T Consensus       183 dva~~~~~~~~~-~---~---~~-~~~~~~~~~--~~~~~~d~~~~  218 (267)
T 3ay3_A          183 DFMRLMKRAFVA-P---K---LG-CTVVYGASA--NTESWWDNDKS  218 (267)
T ss_dssp             HHHHHHHHHHHS-S---C---CC-EEEEEECCS--CSSCCBCCGGG
T ss_pred             HHHHHHHHHHhC-C---C---CC-ceeEecCCC--ccccccCHHHH
Confidence            9999 6655531 1   1   22 468998876  55666665443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.76  E-value=0.0006  Score=60.21  Aligned_cols=80  Identities=13%  Similarity=0.051  Sum_probs=55.3

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||+.+|.+++.+.  .+++++++||+.|.+...                              +.+...+.+++|
T Consensus       134 ~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~------------------------------~~~~~~~~~~~~  183 (267)
T 3rft_A          134 GLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPN------------------------------NYRMLSTWFSHD  183 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCC------------------------------STTHHHHBCCHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCC------------------------------CCCceeeEEcHH
Confidence            789999999999998663  489999999999886421                              233344678999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHH
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKL  126 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~  126 (300)
                      .+++ +..++. ...      .. ..+++++++  ++.+|-+.
T Consensus       184 d~a~~~~~~~~-~~~------~~-~~~~~~~s~--~~~~~~~~  216 (267)
T 3rft_A          184 DFVSLIEAVFR-APV------LG-CPVVWGASA--NDAGWWDN  216 (267)
T ss_dssp             HHHHHHHHHHH-CSC------CC-SCEEEECCC--CTTCCBCC
T ss_pred             HHHHHHHHHHh-CCC------CC-ceEEEEeCC--CCCCcccC
Confidence            9999 655542 111      12 357888776  45565543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.64  E-value=0.0041  Score=51.65  Aligned_cols=78  Identities=13%  Similarity=-0.082  Sum_probs=51.4

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.|..||+.+|+++++  .+++++|+||+.|.+...   .|....                 .+...+.  .+.+.+|.+
T Consensus       126 ~~y~~~K~~~e~~~~~--~~i~~~~lrp~~~~~~~~---~~~~~~-----------------~~~~~~~--~~~i~~~Dv  181 (206)
T 1hdo_A          126 QAVTDDHIRMHKVLRE--SGLKYVAVMPPHIGDQPL---TGAYTV-----------------TLDGRGP--SRVISKHDL  181 (206)
T ss_dssp             HHHHHHHHHHHHHHHH--TCSEEEEECCSEEECCCC---CSCCEE-----------------ESSSCSS--CSEEEHHHH
T ss_pred             hhHHHHHHHHHHHHHh--CCCCEEEEeCCcccCCCC---CcceEe-----------------cccCCCC--CCccCHHHH
Confidence            6799999999999965  579999999999853221   121100                 0111111  378999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGS  116 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~  116 (300)
                      ++ ++.++.+..       .. ..+||++++
T Consensus       182 a~~~~~~~~~~~-------~~-g~~~~i~~g  204 (206)
T 1hdo_A          182 GHFMLRCLTTDE-------YD-GHSTYPSHQ  204 (206)
T ss_dssp             HHHHHHTTSCST-------TT-TCEEEEECC
T ss_pred             HHHHHHHhcCcc-------cc-ccceeeecc
Confidence            99 766653211       23 579999876

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.37  E-value=0.025  Score=48.32  Aligned_cols=74  Identities=19%  Similarity=0.068  Sum_probs=46.7

Q ss_pred             CCcHHHHHHHHHHHHHHHhcCCC-CEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           5 WPNTYTFTKALAEDVLCKEGKGL-PLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~~~l-Pv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      -++.|..||+.+|++++..  ++ +++++||+.|.+...++..         ...+.....+.   .+.. ......+++
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~--~~~~~~~vrpg~v~~~~~~~~~---------~~~~~~~~~~~---~~~~-~~~~~~~~~  203 (242)
T 2bka_A          139 SNFLYLQVKGEVEAKVEEL--KFDRYSVFRPGVLLCDRQESRP---------GEWLVRKFFGS---LPDS-WASGHSVPV  203 (242)
T ss_dssp             CSSHHHHHHHHHHHHHHTT--CCSEEEEEECCEEECTTGGGSH---------HHHHHHHHHCS---CCTT-GGGGTEEEH
T ss_pred             CcchHHHHHHHHHHHHHhc--CCCCeEEEcCceecCCCCCCcH---------HHHHHHHhhcc---cCcc-ccCCcccCH
Confidence            4578999999999999875  57 5999999999986543210         11111111111   1110 012358999


Q ss_pred             ccccc-ccccc
Q psy3027          84 TVSDG-PSEGV   93 (300)
Q Consensus        84 D~vvn-~i~aa   93 (300)
                      |.+++ ++.++
T Consensus       204 ~dva~~~~~~~  214 (242)
T 2bka_A          204 VTVVRAMLNNV  214 (242)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999 76665

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.08  E-value=0.03  Score=49.01  Aligned_cols=102  Identities=11%  Similarity=-0.040  Sum_probs=64.1

Q ss_pred             cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027           7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV   81 (300)
                      ..|..||+..|.+++..+     .++++.++||+.|.+...+...      ............+.       +......+
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~------~~~~~~~~~~~~~~-------~~~~~~~~  231 (278)
T 2bgk_A          165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF------GVDSSRVEELAHQA-------ANLKGTLL  231 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS------SCCHHHHHHHHHHT-------CSSCSCCC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhc------ccchhHHHHhhhcc-------cccccccC
Confidence            579999999999987753     4899999999998775432211      11111111111111       11123467


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL  129 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~  129 (300)
                      .+|.|++ ++.++.+...  .   .. +.++++..+  ..+++.|+.+.
T Consensus       232 ~~~dva~~~~~l~~~~~~--~---~~-G~~~~v~gg--~~~~~~e~~~~  272 (278)
T 2bgk_A          232 RAEDVADAVAYLAGDESK--Y---VS-GLNLVIDGG--YTRTNPAFPTA  272 (278)
T ss_dssp             CHHHHHHHHHHHHSGGGT--T---CC-SCEEEESTT--GGGCCTHHHHH
T ss_pred             CHHHHHHHHHHHcCcccc--c---CC-CCEEEECCc--ccccCCccchh
Confidence            8899999 6655533221  1   23 679999887  67899998877

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=94.83  E-value=0.013  Score=50.44  Aligned_cols=95  Identities=8%  Similarity=-0.049  Sum_probs=56.5

Q ss_pred             cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027           7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV   81 (300)
                      +.|..||+.+|.+++...     .+++++++||+.|.+.....   +......  +       .......  + ..-+.+
T Consensus       151 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~---~~~~~~~--~-------~~~~~~~--~-~~~~~~  215 (255)
T 2dkn_A          151 LAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA---SKADPRY--G-------ESTRRFV--A-PLGRGS  215 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH---HHHCTTT--H-------HHHHSCC--C-TTSSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh---cccchhh--H-------HHHHHHH--H-HhcCCC
Confidence            479999999999998753     48999999999887643211   1000000  0       0000010  1 223678


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHh
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWG  124 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~  124 (300)
                      .+|.+++ ++.++.+...  .   .. +.+|++.++  .+++.+
T Consensus       216 ~~~dva~~~~~l~~~~~~--~---~~-G~~~~v~gg--~~~~~~  251 (255)
T 2dkn_A          216 EPREVAEAIAFLLGPQAS--F---IH-GSVLFVDGG--MDALMR  251 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGT--T---CC-SCEEEESTT--HHHHHC
T ss_pred             CHHHHHHHHHHHhCCCcc--c---ce-eeEEEecCC--eEeeee
Confidence            9999999 7666543221  1   23 579999877  445544

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=92.39  E-value=0.051  Score=45.12  Aligned_cols=34  Identities=9%  Similarity=0.265  Sum_probs=28.9

Q ss_pred             cHHHHHHHHHHHHHHHhc----CCCCEEEecccEEeec
Q psy3027           7 NTYTFTKALAEDVLCKEG----KGLPLAVLRPAVIVST   40 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~----~~lPv~IvRPsiV~~~   40 (300)
                      ..|+.||+..|.+++...    .++++.++||+.|.+.
T Consensus       126 ~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~  163 (202)
T 3d7l_A          126 ASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEES  163 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCc
Confidence            579999999999998764    3799999999987653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=91.99  E-value=0.14  Score=43.03  Aligned_cols=31  Identities=23%  Similarity=0.327  Sum_probs=28.0

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEecccEEeec
Q psy3027           8 TYTFTKALAEDVLCKEGKGLPLAVLRPAVIVST   40 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~   40 (300)
                      .|..||..+|+++++  .+++++++||+.|.+.
T Consensus       130 ~y~~~K~~~e~~~~~--~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          130 SYVQGERQARNVLRE--SNLNYTILRLTWLYND  160 (221)
T ss_dssp             HHHHHHHHHHHHHHH--SCSEEEEEEECEEECC
T ss_pred             HHHHHHHHHHHHHHh--CCCCEEEEechhhcCC
Confidence            899999999999976  5899999999999764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=90.99  E-value=0.12  Score=45.24  Aligned_cols=38  Identities=18%  Similarity=0.219  Sum_probs=30.4

Q ss_pred             CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccCC
Q psy3027           6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYRE   43 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~e   43 (300)
                      -+.|+-||+..|.+++...     .++++.++||+.|.+....
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  190 (281)
T 3m1a_A          148 FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFG  190 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccccc
Confidence            3589999999999987652     4899999999998765443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=90.88  E-value=0.1  Score=43.20  Aligned_cols=34  Identities=21%  Similarity=0.296  Sum_probs=28.6

Q ss_pred             CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEee
Q psy3027           6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVS   39 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~   39 (300)
                      .+.|..||+..|.+++..+     .+++++++||+.|.+
T Consensus       131 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t  169 (207)
T 2yut_A          131 FAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVAT  169 (207)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCS
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccC
Confidence            3679999999999987752     589999999998765

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=89.66  E-value=0.41  Score=40.75  Aligned_cols=76  Identities=13%  Similarity=-0.031  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccccc-
Q psy3027          10 TFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSDG-   88 (300)
Q Consensus        10 t~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vvn-   88 (300)
                      ...|..+|+.+.+  .+++++|+||+.|.+...+.+.                      ............+.+|.|++ 
T Consensus       148 ~~~~~~~~~~l~~--~gi~~~~vrPg~i~~~~~~~~~----------------------~~~~~~~~~~~~i~~~DvA~~  203 (236)
T 3qvo_A          148 LKPFRRAADAIEA--SGLEYTILRPAWLTDEDIIDYE----------------------LTSRNEPFKGTIVSRKSVAAL  203 (236)
T ss_dssp             GHHHHHHHHHHHT--SCSEEEEEEECEEECCSCCCCE----------------------EECTTSCCSCSEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHH--CCCCEEEEeCCcccCCCCcceE----------------------EeccCCCCCCcEECHHHHHHH
Confidence            3456777877754  5899999999999875332110                      01111111235789999999 


Q ss_pred             cccccccccCCCCCCCCCCCcEEEeeCC
Q psy3027          89 PSEGVWQKKFPTSVFRPDPIPIYNFVGS  116 (300)
Q Consensus        89 ~i~aa~~~~~~~~~~~~~~~~iy~~~s~  116 (300)
                      ++.++.+...      .. ..+|+++++
T Consensus       204 i~~ll~~~~~------~~-g~~~~i~~~  224 (236)
T 3qvo_A          204 ITDIIDKPEK------HI-GENIGINQP  224 (236)
T ss_dssp             HHHHHHSTTT------TT-TEEEEEECS
T ss_pred             HHHHHcCccc------cc-CeeEEecCC
Confidence            7666643221      23 569999876

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=88.85  E-value=0.25  Score=42.54  Aligned_cols=36  Identities=17%  Similarity=0.237  Sum_probs=28.4

Q ss_pred             cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccC
Q psy3027           7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYR   42 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~   42 (300)
                      ..|..||+..|.+++...     .++++.++||+.|.+...
T Consensus       163 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  203 (264)
T 2pd6_A          163 TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT  203 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccch
Confidence            579999998888876642     489999999998876543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=88.10  E-value=0.22  Score=44.03  Aligned_cols=100  Identities=9%  Similarity=-0.098  Sum_probs=57.0

Q ss_pred             CcHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeec-cCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccc
Q psy3027           6 PNTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVST-YREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTD   79 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~-~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~d   79 (300)
                      ...|..||+..|.+++...     .++++.++||+.|.++ ..+       ++............+    .+     .-.
T Consensus       174 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~~~~~~~~~~~~----~p-----~~~  237 (302)
T 1w6u_A          174 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS-------RLDPTGTFEKEMIGR----IP-----CGR  237 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------------CCTTSHHHHHHHTT----CT-----TSS
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh-------hcccchhhHHHHHhc----CC-----cCC
Confidence            3579999999999987752     4799999999988653 111       111100000011111    11     123


Q ss_pred             eeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH
Q psy3027          80 MVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL  129 (300)
Q Consensus        80 iVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~  129 (300)
                      ++.+|.+++ ++.++.+...  .   .. +.++++.++  ..+++.++.+.
T Consensus       238 ~~~~~dva~~~~~l~~~~~~--~---~~-G~~~~v~gg--~~~~~~~~~~~  280 (302)
T 1w6u_A          238 LGTVEELANLAAFLCSDYAS--W---IN-GAVIKFDGG--EEVLISGEFND  280 (302)
T ss_dssp             CBCHHHHHHHHHHHTSGGGT--T---CC-SCEEEESTT--HHHHHHSTTGG
T ss_pred             CCCHHHHHHHHHHHcCCccc--c---cC-CCEEEECCC--eeeccCCcccc
Confidence            567888888 6655532221  1   23 569999877  45666665554

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=82.33  E-value=0.18  Score=43.45  Aligned_cols=93  Identities=12%  Similarity=0.169  Sum_probs=55.1

Q ss_pred             cHHHHHHHHHHHHHHHhc-----CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027           7 NTYTFTKALAEDVLCKEG-----KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~-----~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV   81 (300)
                      ..|.-||+..|.+.+..+     .++.+.++||+.|.+...+....|.+...    .+.....            ...+.
T Consensus       149 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~----~~~~~~~------------~~~~~  212 (254)
T 1sby_A          149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEP----RVAELLL------------SHPTQ  212 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCT----THHHHHT------------TSCCE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhH----HHHHHHh------------cCCCC
Confidence            479999999999887642     48999999999887654322222321100    0000000            01223


Q ss_pred             ccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHh
Q psy3027          82 PSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWG  124 (300)
Q Consensus        82 PVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~  124 (300)
                      .+|.+++ ++.++. ..       .. +.+|++..+...+++|.
T Consensus       213 ~~~dvA~~i~~~~~-~~-------~~-G~~~~v~gG~~~~~~~~  247 (254)
T 1sby_A          213 TSEQCGQNFVKAIE-AN-------KN-GAIWKLDLGTLEAIEWT  247 (254)
T ss_dssp             EHHHHHHHHHHHHH-HC-------CT-TCEEEEETTEEEECCCC
T ss_pred             CHHHHHHHHHHHHH-cC-------CC-CCEEEEeCCceeEeccc
Confidence            6788888 665542 11       23 56899887755566664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	300
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.67
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.65
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.59
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.58
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.54
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.49
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.46
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.44
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.39
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.18
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.06
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.02
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.01
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	97.99
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.94
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.91
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	97.9
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.87
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.83
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.64
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	97.63
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	97.6
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.4
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.9
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.9
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.49
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.87
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	93.15
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	93.01
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	85.2

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=9.6e-09  Score=93.32  Aligned_cols=112  Identities=13%  Similarity=-0.046  Sum_probs=80.6

Q ss_pred             cHHHHHHHHHHHHHHHhcC--CCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcce-eeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEGK--GLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVL-HTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~--~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l-~~~~~~~~~~~diVPV   83 (300)
                      |.|+.||..||+++..++.  ++|++|+||+.|+|....+- +.   .......+.....|.- ....++++...|++.|
T Consensus       154 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~-~~---~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v  229 (357)
T d1db3a_         154 SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGET-FV---TRKITRAIANIAQGLESCLYLGNMDSLRDWGHA  229 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT-SH---HHHHHHHHHHHHTTSCCCEEESCTTCEECCEEH
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcC-CC---chHHHHHHHHHHhCCCceEEECCCCeeecceee
Confidence            6799999999999998743  89999999999999643211 00   0011223333334432 3355788889999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |++++ ++.++. .        .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       230 ~D~~~a~~~~~~-~--------~~-~~~yni~sg--~~~s~~~~~~~~~~~~g  270 (357)
T d1db3a_         230 KDYVKMQWMMLQ-Q--------EQ-PEDFVIATG--VQYSVRQFVEMAAAQLG  270 (357)
T ss_dssp             HHHHHHHHHTTS-S--------SS-CCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred             chHHHHHHHHHh-C--------CC-CCeEEECCC--CceehHHHHHHHHHHhC
Confidence            99999 776652 1        22 569999998  78999999999 77765

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.65  E-value=2.1e-08  Score=89.40  Aligned_cols=109  Identities=15%  Similarity=0.044  Sum_probs=83.0

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCCh-HHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGP-IGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~-~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      +.|+.||..+|.+++.++  .++|++|+||+.|+|..+.+        .+. ..++..+..|.--.+.++++..-|.+.|
T Consensus       149 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~--------~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v  220 (322)
T d1r6da_         149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--------EKLIPLFVTNLLDGGTLPLYGDGANVREWVHT  220 (322)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--------TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc--------CcHHHHHHHHHHcCCCcEEecCCCeEEccEEH
Confidence            589999999999998873  38999999999999965432        122 2334444455544567788888899999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+|+ ++.++.+ .       .. ..+||++++  +++++.|+.+. .+..+
T Consensus       221 ~D~a~ai~~~~~~-~-------~~-~~~~ni~~~--~~~s~~e~~~~i~~~~~  262 (322)
T d1r6da_         221 DDHCRGIALVLAG-G-------RA-GEIYHIGGG--LELTNRELTGILLDSLG  262 (322)
T ss_dssp             HHHHHHHHHHHHH-C-------CT-TCEEEECCC--CEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhC-C-------CC-CCeeEEeec--ccchhHHHHHHHHHHhC
Confidence            99999 7766632 1       23 569999988  89999999999 77766

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.59  E-value=4.1e-08  Score=87.88  Aligned_cols=124  Identities=15%  Similarity=0.084  Sum_probs=89.4

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCC-hHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYG-PIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g-~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      +.|+.||.+||+++.+++  .++|++|+||+.|+|....+.-|-.++... ...++.....|.--.++++++..-|.+.|
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v  225 (342)
T d2blla1         146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  225 (342)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred             chhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccc
Confidence            569999999999998874  389999999999999766554333322222 23444455566655678899999999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcCCcCC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCHPIWP  138 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~~~~P  138 (300)
                      |.+|+ +..++.+...  .   .. ..+||++++ .+++|+.|+.+. .+..+ ..+
T Consensus       226 ~D~~~a~~~~~~~~~~--~---~~-g~~~Nig~~-~~~~t~~~l~~~i~~~~~-~~~  274 (342)
T d2blla1         226 RDGIEALYRIIENAGN--R---CD-GEIINIGNP-ENEASIEELGEMLLASFE-KHP  274 (342)
T ss_dssp             HHHHHHHHHHHHCGGG--T---TT-TEEEEECCT-TSEEEHHHHHHHHHHHHH-TCT
T ss_pred             ccccceeeeehhhccc--c---CC-CeEEEEecc-cchhHHHHHHHHHHHHhC-CCc
Confidence            99999 7666543221  1   23 579999764 357899999999 77665 443

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=4.5e-08  Score=87.12  Aligned_cols=111  Identities=11%  Similarity=-0.045  Sum_probs=83.0

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||..||.++..+.  .+++++|+||+.|+|+...+-.+     .-...++..+..|.--.++++++...|++.||
T Consensus       142 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~-----~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~  216 (312)
T d2b69a1         142 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVS  216 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCc-----cHHHHHHHHHHcCCCeEEeCCCCeeEccEEHH
Confidence            579999999999998874  38999999999999965432111     11123444444565445778889999999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+++ ++.+. +.        .. ..+||++++  .++|+.++.+. .+..+
T Consensus       217 D~~~~~~~~~-~~--------~~-~~~~n~~~~--~~~~~~~~~~~i~~~~~  256 (312)
T d2b69a1         217 DLVNGLVALM-NS--------NV-SSPVNLGNP--EEHTILEFAQLIKNLVG  256 (312)
T ss_dssp             HHHHHHHHHH-TS--------SC-CSCEEESCC--CEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHH-hh--------cc-CCceEecCC--cccchhhHHHHHHHHhC
Confidence            9999 76654 11        22 458999988  89999999999 87776

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.54  E-value=4.7e-08  Score=87.89  Aligned_cols=110  Identities=13%  Similarity=-0.029  Sum_probs=82.8

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      |.|+.||..+|++++.++  .+++++|+||+.|+|+.+.+- +      .....+.....|.-..+.++++..-|.+.||
T Consensus       157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~------~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~  229 (346)
T d1oc2a_         157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-K------FIPRQITNILAGIKPKLYGEGKNVRDWIHTN  229 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-S------HHHHHHHHHHHTCCCEEETTSCCEEECEEHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-c------hhHHHHHHHHcCCceeEeCCCCccccccchh
Confidence            679999999999998864  489999999999999544221 1      1123333344555556778999999999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+++ ++.+.. ..       .. ..+||++++  ++.++.++.+. .+...
T Consensus       230 D~a~a~~~~~~-~~-------~~-~~~~~~~~~--~~~~~~~~~~~i~~~~~  270 (346)
T d1oc2a_         230 DHSTGVWAILT-KG-------RM-GETYLIGAD--GEKNNKEVLELILEKMG  270 (346)
T ss_dssp             HHHHHHHHHHH-HC-------CT-TCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHh-hc-------cc-Ccccccccc--ccccchHHHHHHHHHhC
Confidence            9999 665542 22       23 579999998  88999999999 77766

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.49  E-value=9.6e-08  Score=86.77  Aligned_cols=110  Identities=15%  Similarity=0.054  Sum_probs=82.1

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      |.|+.||.+||+++..+.  .+++++++||+.|+|..+.+     +++  ...++..+..|.--.+.++++..-|.+.||
T Consensus       165 s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~~~--i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~  237 (361)
T d1kewa_         165 SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-----EKL--IPLVILNALEGKPLPIYGKGDQIRDWLYVE  237 (361)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-----TSH--HHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc-----CcH--HHHHHHHHHcCCCcEEeCCCCeEEeCEEHH
Confidence            559999999999998863  38999999999999954322     211  223444455665445678889999999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .+|+ ++.++...        .. ..+||++++  ++.++.|+.+. .+...
T Consensus       238 D~a~ai~~~~~~~--------~~-~~~~Ni~s~--~~~s~~~~~~~i~~~~~  278 (361)
T d1kewa_         238 DHARALHMVVTEG--------KA-GETYNIGGH--NEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             HHHHHHHHHHHHC--------CT-TCEEEECCC--CEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcC--------CC-CCeEEECCC--CCcchHHHHhHhhhhcc
Confidence            9999 77766321        22 469999988  88999999998 66543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.46  E-value=7.3e-08  Score=86.35  Aligned_cols=116  Identities=15%  Similarity=-0.049  Sum_probs=83.3

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcceeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~l~~~~~~~~~~~diVP   82 (300)
                      .|.|+.||..+|+++..++  .++|++|+||+.|+|...+|- |..   .+.. .++.....|.--.+.+++...-|.+.
T Consensus       163 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~-~~~---~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~  238 (341)
T d1sb8a_         163 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPN-GAY---AAVIPKWTSSMIQGDDVYINGDGETSRDFCY  238 (341)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCC-STT---CCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred             CCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCC-Cch---hhhHHHHHHHHHcCCceEEcCCCCEEEEEEE
Confidence            4789999999999998764  389999999999999776553 211   1212 22233344543456678888889999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.++. ++.+......      .. ..+||++++  ++.|+.|+.+. .+...
T Consensus       239 v~D~~~a~~~~~~~~~~------~~-~~~~~~~~~--~~~si~~i~~~i~~~~~  283 (341)
T d1sb8a_         239 IENTVQANLLAATAGLD------AR-NQVYNIAVG--GRTSLNQLFFALRDGLA  283 (341)
T ss_dssp             HHHHHHHHHHHHTCCGG------GC-SEEEEESCS--CCEEHHHHHHHHHHHHH
T ss_pred             Eeccchhhhhhhhcccc------cc-ceeeeeccc--ccchHHHHHHHHHHHhc
Confidence            999998 6555432211      23 569999887  88999999999 77666

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.44  E-value=1.2e-07  Score=85.42  Aligned_cols=114  Identities=9%  Similarity=-0.102  Sum_probs=80.9

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      +.|+.||..||+++..+.  .++|++|+||+.|+|....+...+.  .............+.-....+++...-|+|.|+
T Consensus       160 ~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~  237 (363)
T d2c5aa1         160 DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGRE--KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFID  237 (363)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCC--CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCccccccc--ccccccccccccccccccccCCCCeEEEEeehh
Confidence            579999999999998763  3899999999999997654322211  111122222233333334566777788999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++. ++.++-      +   .. ..+||++++  .++|+.|+.+. .+..+
T Consensus       238 D~~~~~~~~~~------~---~~-~~~~ni~~~--~~~s~~~l~~~i~~~~g  277 (363)
T d2c5aa1         238 ECVEGVLRLTK------S---DF-REPVNIGSD--EMVSMNEMAEMVLSFEE  277 (363)
T ss_dssp             HHHHHHHHHHH------S---SC-CSCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHh------C---CC-CCeEEEecC--CcccHHHHHHHHHHHhC
Confidence            9999 665541      1   22 569999998  88999999999 88766

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.39  E-value=2.5e-07  Score=84.32  Aligned_cols=119  Identities=10%  Similarity=0.021  Sum_probs=81.1

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCcc--cccc---CCCC----h-HHHHHHHhhcceeeeccCC
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVR--GWID---NVYG----P-IGMLVGIATGVLHTHLINL   74 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~p--Gw~d---~~~g----~-~~~~~~~~~G~l~~~~~~~   74 (300)
                      |.|+.||.+||+++..+.  .+++.+|+||+.|+|...++.-  +..-   +..+    . .-++.....|.--.+++++
T Consensus       180 ~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~  259 (393)
T d1i24a_         180 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKG  259 (393)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTS
T ss_pred             cHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeec
Confidence            579999999999998773  4899999999999998765431  1110   0111    1 1233344556555677889


Q ss_pred             Ccccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          75 NTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        75 ~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +..-|.++||.+++ ++.++.+..        . ...|++.++..+++|+.|+.++ .+...
T Consensus       260 ~~~rd~v~v~D~~~a~~~~~~~~~--------~-~g~~~~~~~~~~~~si~el~~~i~~~~~  312 (393)
T d1i24a_         260 GQTRGYLDIRDTVQCVEIAIANPA--------K-AGEFRVFNQFTEQFSVNELASLVTKAGS  312 (393)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHSCC--------C-TTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHHHHHHhhc--------c-cceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence            99999999999999 776663221        1 2344443333367899999999 77654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.9e-06  Score=74.78  Aligned_cols=123  Identities=13%  Similarity=-0.004  Sum_probs=82.9

Q ss_pred             CCCcHHHHHHHHHHHHHHHh---cCCCCEEEecccEEeeccCCCccccccCCC--ChHHHHH--HHhhcceeeecc----
Q psy3027           4 EWPNTYTFTKALAEDVLCKE---GKGLPLAVLRPAVIVSTYREPVRGWIDNVY--GPIGMLV--GIATGVLHTHLI----   72 (300)
Q Consensus         4 ~~pNtYt~TK~~aE~lv~~~---~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~--g~~~~~~--~~~~G~l~~~~~----   72 (300)
                      ...|.|+.+|..+|+.+.++   ..+++.+++||+.|+|....+..|......  .....+.  +.+++..-.+.+    
T Consensus       152 ~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~  231 (346)
T d1ek6a_         152 GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYD  231 (346)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             ccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCccc
Confidence            34568999999999999875   358999999999999987655544332211  1122222  333343222333    


Q ss_pred             --CCCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          73 --NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        73 --~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                        ++...-|++.||.+|+ +..++.....  .   .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       232 ~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~--~---~~-~~i~Ni~~~--~~~s~~dl~~~i~~~~~  289 (346)
T d1ek6a_         232 TEDGTGVRDYIHVVDLAKGHIAALRKLKE--Q---CG-CRIYNLGTG--TGYSVLQMVQAMEKASG  289 (346)
T ss_dssp             SSSSSCEECEEEHHHHHHHHHHHHHHHTT--T---CC-EEEEEECCS--CCEEHHHHHHHHHHHHC
T ss_pred             CCCCCeeEeEEEEEeccchhhhhcccccc--c---cC-ceEEEeCCC--CcccHHHHHHHHHHHhC
Confidence              2334458999999999 6655433322  1   23 579999988  88999999999 87776

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=2.1e-06  Score=75.34  Aligned_cols=122  Identities=7%  Similarity=-0.089  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccc--cccCCCChHHHHHHHhhcceeeeccCCCcccceecc
Q psy3027           8 TYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRG--WIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pG--w~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPV   83 (300)
                      .|+.||..||+++.++.  .++|++|+||+.|+|...++...  .+...............+-.-...+++....+++-|
T Consensus       134 ~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v  213 (315)
T d1e6ua_         134 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV  213 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEe
Confidence            49999999999998864  38999999999999965532211  000011112222333444444566777888899999


Q ss_pred             ccccc-cccccccccCC---CCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFP---TSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~---~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +.+++ +..........   ..  ... ..+++.+++  .+.+..++.+. .+...
T Consensus       214 ~d~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~--~~~~i~~~~~~i~~~~~  264 (315)
T d1e6ua_         214 DDMAAASIHVMELAHEVWLENT--QPM-LSHINVGTG--VDCTIRELAQTIAKVVG  264 (315)
T ss_dssp             HHHHHHHHHHHHSCHHHHHHTS--BTT-BCCEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred             ehhHHHHHHhhhhccccccccc--ccc-ccccccCCC--cchHHHHHHHHHHHHhC
Confidence            99999 65544221100   00  123 468888887  77899999999 77665

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.02  E-value=4.5e-06  Score=75.58  Aligned_cols=125  Identities=14%  Similarity=0.036  Sum_probs=79.0

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCC-ccccccCCCChHHHHHH-----Hhh------------cc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREP-VRGWIDNVYGPIGMLVG-----IAT------------GV   66 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP-~pGw~d~~~g~~~~~~~-----~~~------------G~   66 (300)
                      +.|..||..+|+++..+.  .+++++++||+.|+|....+ .+.+.++-.+....+.+     ...            |.
T Consensus       173 ~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~  252 (383)
T d1gy8a_         173 SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDK  252 (383)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CC
T ss_pred             CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCC
Confidence            679999999999998873  48999999999999987754 22333333332222211     011            11


Q ss_pred             eeeecc------CCCcccceeccccccc-cccccccccCCCCC-CCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          67 LHTHLI------NLNTVTDMVPSTVSDG-PSEGVWQKKFPTSV-FRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        67 l~~~~~------~~~~~~diVPVD~vvn-~i~aa~~~~~~~~~-~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      .-.+.+      ++...=|+++|+++++ ++.+.......... .... ..+||++++  +++|+.|+.+. .+...
T Consensus       253 ~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~-~~i~Ni~s~--~~~s~~el~~~i~~~~~  326 (383)
T d1gy8a_         253 RMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKY-FSVFNLGTS--RGYSVREVIEVARKTTG  326 (383)
T ss_dssp             CEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGS-EEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred             ceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccC-ccEEEeCCC--CceeHHHHHHHHHHHhC
Confidence            111222      2344448999999999 66554322110000 0022 579999988  78999999999 87766

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.01  E-value=2.8e-06  Score=75.11  Aligned_cols=112  Identities=14%  Similarity=-0.066  Sum_probs=75.8

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcc-eeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGV-LHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~-l~~~~~~~~~~~diVPV   83 (300)
                      +.|+.||..||+++..++  .++|++|+||+.|+|....+  ++..+  .....+.....|. ...+.+++....|++.|
T Consensus       156 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~--~~~~~--~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v  231 (339)
T d1n7ha_         156 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGE--NFVTR--KITRALGRIKVGLQTKLFLGNLQASRDWGFA  231 (339)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHHH--HHHHHHHHHHHTSCCCEEESCTTCEEECEEH
T ss_pred             chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCC--CCCcc--hhhHHHHHHhcCCCCeEEeCCCCccccceee
Confidence            679999999999998873  38999999999999964321  11100  0111112222332 23456778889999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ +..++..         .. ...++++++  .+.++.++.+. .+...
T Consensus       232 ~D~a~~~~~~~~~---------~~-~~~~~~~~~--~~~s~~~~~~~~~~~~~  272 (339)
T d1n7ha_         232 GDYVEAMWLMLQQ---------EK-PDDYVVATE--EGHTVEEFLDVSFGYLG  272 (339)
T ss_dssp             HHHHHHHHHHHTS---------SS-CCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred             ehHHHHHHHHHhc---------CC-CCccccccc--cccccchhhhhhhhhhh
Confidence            99999 6665521         12 346666666  77899999999 77766

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.99  E-value=2.6e-06  Score=74.88  Aligned_cols=113  Identities=11%  Similarity=-0.086  Sum_probs=79.8

Q ss_pred             CcHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcc-eeeeccCCCcccceec
Q psy3027           6 PNTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGV-LHTHLINLNTVTDMVP   82 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~-l~~~~~~~~~~~diVP   82 (300)
                      .+.|+.||.++|+++..++  .+++++|+||+.|+|....+ .+ ..  ......+.....|. .....++++..-|++.
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~-~~-~~--~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~  220 (321)
T d1rpna_         145 RSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI-EF-VT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGF  220 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT-TS-HH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred             cChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccc-cc-cH--HHHHHHHHHHHhCCCCcEEECCCCeEEccEE
Confidence            4789999999999998874  48999999999999854311 00 00  01223333333333 2345678888889999


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ||.+|+ ++.++. .        .. ..+||++++  ++.++.++.+. .+..+
T Consensus       221 v~D~~~~~~~~~~-~--------~~-~~~~ni~~~--~~~s~~~~~~~~~~~~~  262 (321)
T d1rpna_         221 AGDYVEAMWLMLQ-Q--------DK-ADDYVVATG--VTTTVRDMCQIAFEHVG  262 (321)
T ss_dssp             HHHHHHHHHHHHH-S--------SS-CCCEEECCS--CEEEHHHHHHHHHHTTT
T ss_pred             eHHHHHHHHHHHh-c--------CC-cCCceeccc--ccceehhhhHHHHHHhC
Confidence            999999 766652 1        22 458999988  88999999999 76655

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=6.7e-06  Score=70.89  Aligned_cols=114  Identities=11%  Similarity=-0.025  Sum_probs=70.3

Q ss_pred             CCcHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChH-HHHHHHhhcc-eeeeccCCCcccce
Q psy3027           5 WPNTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPI-GMLVGIATGV-LHTHLINLNTVTDM   80 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~-~~~~~~~~G~-l~~~~~~~~~~~di   80 (300)
                      -.+.|+.||..+|.++.++  ..++|++++||+.|+|....+    -....... .+......|. .....++++..-+.
T Consensus       136 ~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~  211 (307)
T d1eq2a_         136 PLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGH----KGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF  211 (307)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGG----GGGGSCHHHHHHHHHHC-------------CBCE
T ss_pred             cccccccccchhhhhccccccccccccccccceeEeeccccc----cccccccccccccccccccceeeecCccceeeee
Confidence            4578999999999999887  458999999999999965421    11112222 2233333332 22345677778899


Q ss_pred             eccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          81 VPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        81 VPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +.|+.++. +..+.- .        .. ..+||++++  ++.|++|+.+. .+...
T Consensus       212 ~~v~d~~~~~~~~~~-~--------~~-~~~~~~~~~--~~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         212 VYVGDVADVNLWFLE-N--------GV-SGIFNLGTG--RAESFQAVADATLAYHK  255 (307)
T ss_dssp             EEHHHHHHHHHHHHH-H--------CC-CEEEEESCS--CCBCHHHHHHHC-----
T ss_pred             eecccHHHHHHHHhh-h--------cc-ccccccccc--cchhHHHHHHHHHHhcC
Confidence            99999999 654442 1        22 469999988  78999999999 76544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=1.7e-05  Score=70.44  Aligned_cols=121  Identities=17%  Similarity=0.084  Sum_probs=78.6

Q ss_pred             CcHHHHHHHHHHHHHHHh---cCCCCEEEecccEEeeccCCCccccccCC--CChHHHHHHHhhc--ceeeeccC-----
Q psy3027           6 PNTYTFTKALAEDVLCKE---GKGLPLAVLRPAVIVSTYREPVRGWIDNV--YGPIGMLVGIATG--VLHTHLIN-----   73 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~---~~~lPv~IvRPsiV~~~~~eP~pGw~d~~--~g~~~~~~~~~~G--~l~~~~~~-----   73 (300)
                      .+.|..||..+|+++.+.   ..++|++|+||+.|+|....+.-|.-...  +.....+.....+  -.-.+.|+     
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~  225 (338)
T d1udca_         146 QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSST
T ss_pred             cchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccC
Confidence            578999999999999864   35899999999999997665443322111  1112222222222  12223333     


Q ss_pred             -CCcccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          74 -LNTVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        74 -~~~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                       +...-|++.|+.++. ...+......  .   .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       226 ~g~~~rd~i~v~D~~~~~~~~~~~~~~--~---~~-~~i~Ni~~~--~~~si~e~~~~i~~~~g  281 (338)
T d1udca_         226 DGTGVRDYIHVMDLADGHVVAMEKLAN--K---PG-VHIYNLGAG--VGNSVLDVVNAFSKACG  281 (338)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHTT--C---CE-EEEEEESCS--SCEEHHHHHHHHHHHHT
T ss_pred             CCCceeeEEEEeehhhhcccccccccc--c---cC-cceeeecCC--CCCcHHHHHHHHHHHHC
Confidence             445568999999987 5444432222  1   22 579999987  88999999999 77766

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=5.7e-06  Score=73.37  Aligned_cols=112  Identities=13%  Similarity=-0.153  Sum_probs=76.2

Q ss_pred             cHHHHHHHHHHHHHHHh--cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhc-ceeeeccCCCcccceecc
Q psy3027           7 NTYTFTKALAEDVLCKE--GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATG-VLHTHLINLNTVTDMVPS   83 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~--~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G-~l~~~~~~~~~~~diVPV   83 (300)
                      |.|+.||..||+++..+  ..++|.+|+||+.|+|....+..+    .......+.....| .-....++++...|++.|
T Consensus       155 ~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~----~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v  230 (347)
T d1t2aa_         155 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFV----TRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA  230 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSH----HHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCcc----ccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence            57999999999999876  348999999999999964432110    00111112222222 223456788888999999


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+++ ++.++..         .. ...|+.++.  +..++++..+. .....
T Consensus       231 ~D~~~a~~~~~~~---------~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~  271 (347)
T d1t2aa_         231 KDYVEAMWLMLQN---------DE-PEDFVIATG--EVHSVREFVEKSFLHIG  271 (347)
T ss_dssp             HHHHHHHHHHHHS---------SS-CCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHhhc---------CC-Cccceeccc--cccccchhhhhhhhhhc
Confidence            99999 7776632         12 346777776  67899999888 66555

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.87  E-value=9.9e-06  Score=72.19  Aligned_cols=124  Identities=12%  Similarity=-0.056  Sum_probs=72.0

Q ss_pred             cHHHHHHHHHHHHHHHh----cCCCCEEEecccEEeeccCCCccccccC--CCChHHHHHHHhh--cceeeeccCCCccc
Q psy3027           7 NTYTFTKALAEDVLCKE----GKGLPLAVLRPAVIVSTYREPVRGWIDN--VYGPIGMLVGIAT--GVLHTHLINLNTVT   78 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~----~~~lPv~IvRPsiV~~~~~eP~pGw~d~--~~g~~~~~~~~~~--G~l~~~~~~~~~~~   78 (300)
                      |.|+.||.+||+++.++    ..+++++|+||+.|+|....++-|....  .+.....+.....  +.--.+.+++...-
T Consensus       151 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~  230 (347)
T d1z45a2         151 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSR  230 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------C
T ss_pred             ChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcccc
Confidence            67999999999999875    3589999999999998766554443221  1122333333222  22223445555555


Q ss_pred             ceecccccc------c-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          79 DMVPSTVSD------G-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        79 diVPVD~vv------n-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |..+++.++      . ++.++-....... .... ..+||++++  +++|+.|+.+. .+..+
T Consensus       231 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~Ni~~~--~~~s~~e~~~~i~~~~~  290 (347)
T d1z45a2         231 DGTPIRDYIHVVDLAKGHIAALQYLEAYNE-NEGL-CREWNLGSG--KGSTVFEVYHAFCKASG  290 (347)
T ss_dssp             CSSCEECEEEHHHHHHHHHHHHHHHHHSCT-TCCE-EEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred             CCceeeeeeeeecccccccccccccccccc-cccc-cccceecCC--CcccHHHHHHHHHHHHC
Confidence            555555554      4 3333221111000 0022 469999988  89999999999 77766

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.83  E-value=1.6e-05  Score=70.71  Aligned_cols=112  Identities=13%  Similarity=0.074  Sum_probs=73.6

Q ss_pred             cHHHHHHHHHHHHHHHh----cCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceec
Q psy3027           7 NTYTFTKALAEDVLCKE----GKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~----~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVP   82 (300)
                      +.|..||..||+++.++    ..++.++++||+.|.|....|-    ++-.....++.....|...... ..+..-+.|.
T Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~----~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~  248 (342)
T d1y1pa1         174 WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPE----TQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVS  248 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTT----TCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEE
T ss_pred             CcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCcc----ccccchHHHHHHHHcCCcCccc-CCccceeeee
Confidence            45999999999988665    3478899999999998654332    1122233444444444432222 2334457899


Q ss_pred             cccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          83 STVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        83 VD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |+.++. ++.+....    .   .  ...|+++++  +++||+|+.+. .+.+.
T Consensus       249 v~Dva~~~i~~l~~~----~---~--~g~~~~~~~--~~~t~~eia~~i~k~~p  291 (342)
T d1y1pa1         249 AVDIGLLHLGCLVLP----Q---I--ERRRVYGTA--GTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             HHHHHHHHHHHHHCT----T---C--CSCEEEECC--EEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHhhcCc----c---c--cceEEEEcC--CceEHHHHHHHHHHHcC
Confidence            999999 77665321    1   2  335667777  78999999999 87753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.64  E-value=4.1e-05  Score=65.26  Aligned_cols=103  Identities=11%  Similarity=-0.016  Sum_probs=74.9

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccc
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTV   85 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~   85 (300)
                      .+.|..+|..+|+.+.+.  +.+.+|+||+.|+|.....          ...++.....+....+.  ++...+.+.||.
T Consensus       123 ~~~~~~~k~~~e~~~~~~--~~~~~i~R~~~vyG~~~~~----------~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D  188 (281)
T d1vl0a_         123 QSAYGKTKLEGENFVKAL--NPKYYIVRTAWLYGDGNNF----------VKTMINLGKTHDELKVV--HDQVGTPTSTVD  188 (281)
T ss_dssp             CSHHHHHHHHHHHHHHHH--CSSEEEEEECSEESSSSCH----------HHHHHHHHHHCSEEEEE--SSCEECCEEHHH
T ss_pred             hhhhhhhhhHHHHHHHHh--CCCccccceeEEeCCCccc----------ccchhhhhccCCceeec--CCceeccchhhh
Confidence            467999999999999876  5799999999999864321          12233333333332333  457789999999


Q ss_pred             ccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          86 SDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        86 vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      +++ +..++ +.        .. ..+||++++  +++|+.|+.+. .+..+
T Consensus       189 ~~~~~~~~~-~~--------~~-~g~~~~~~~--~~~s~~e~~~~i~~~~g  227 (281)
T d1vl0a_         189 LARVVLKVI-DE--------KN-YGTFHCTCK--GICSWYDFAVEIFRLTG  227 (281)
T ss_dssp             HHHHHHHHH-HH--------TC-CEEEECCCB--SCEEHHHHHHHHHHHHC
T ss_pred             hhhhhhhhh-hh--------cc-cCceeEeCC--CccchHHHHHHHHHHhC
Confidence            999 66665 22        12 359999988  78999999999 88877

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=97.63  E-value=3.4e-05  Score=65.80  Aligned_cols=106  Identities=12%  Similarity=0.034  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccccc
Q psy3027           8 TYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSD   87 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vv   87 (300)
                      .+...|..+|..+.+  .++|.+|+||+.|.|....++.......          .++.....+++++...+.|.+|+++
T Consensus       128 ~~~~~~~~~~~~~~~--~~~~~~i~r~~~v~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~i~v~Dva  195 (307)
T d1qyca_         128 SVFEVKAKVRRAIEA--EGIPYTYVSSNCFAGYFLRSLAQAGLTA----------PPRDKVVILGDGNARVVFVKEEDIG  195 (307)
T ss_dssp             HHHHHHHHHHHHHHH--HTCCBEEEECCEEHHHHTTTTTCTTCSS----------CCSSEEEEETTSCCEEEEECHHHHH
T ss_pred             ccccccccccchhhc--cCCCceecccceecCCCccchhhhhhhh----------hhcccceeeecccccccCCcHHHHH
Confidence            456666777776665  4799999999999987665544333221          1223335677889999999999999


Q ss_pred             c-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          88 G-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        88 n-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      + ++.++.+...      .. ..+|+++++  +++|+.|+.+. .+..+
T Consensus       196 ~~~~~~l~~~~~------~~-~~~~~~~~~--~~~s~~ei~~~~~~~~G  235 (307)
T d1qyca_         196 TFTIKAVDDPRT------LN-KTLYLRLPA--NTLSLNELVALWEKKID  235 (307)
T ss_dssp             HHHHTTSSCGGG------TT-EEEECCCGG--GEEEHHHHHHHHHHHTT
T ss_pred             HHHHHHhcChhh------cC-ceeEEeCCC--CccCHHHHHHHHHHHHC
Confidence            9 6655532211      22 346777776  78999999999 88777

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=97.60  E-value=2.6e-05  Score=67.25  Aligned_cols=110  Identities=6%  Similarity=-0.036  Sum_probs=74.2

Q ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccc
Q psy3027           5 WPNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPST   84 (300)
Q Consensus         5 ~pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD   84 (300)
                      ..++|..+|..+|+...+  .++|.+|+||+.++|....+++.+.-....         .+--..++++++...+.|.||
T Consensus       129 ~~~~~~~~~~~~~~~~~~--~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~~~g~~~~~~i~v~  197 (312)
T d1qyda_         129 PGSITFIDKRKVRRAIEA--ASIPYTYVSSNMFAGYFAGSLAQLDGHMMP---------PRDKVLIYGDGNVKGIWVDED  197 (312)
T ss_dssp             STTHHHHHHHHHHHHHHH--TTCCBCEEECCEEHHHHTTTSSCTTCCSSC---------CSSEECCBTTSCSEEEEECHH
T ss_pred             hhhhhhHHHHHHHHhhcc--cccceEEeccceeecCCccchhhHHHHhhh---------cccccccccccccccceeeHH
Confidence            345666666666665443  589999999999998766555443332221         111224667889999999999


Q ss_pred             cccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          85 VSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        85 ~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++++ ++.++.+..   .   .. ..+|+++++  +++|++|+.+. .+..+
T Consensus       198 Dva~a~~~~l~~~~---~---~~-~~~~~~~~~--~~~s~~e~~~~~~~~~g  240 (312)
T d1qyda_         198 DVGTYTIKSIDDPQ---T---LN-KTMYIRPPM--NILSQKEVIQIWERLSE  240 (312)
T ss_dssp             HHHHHHHHHTTCGG---G---SS-SEEECCCGG--GEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCcc---c---cC-ceEEEeCCC--cCCCHHHHHHHHHHHHC
Confidence            9999 766653221   1   12 236777766  78999999999 77766

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=0.00013  Score=61.25  Aligned_cols=76  Identities=17%  Similarity=0.091  Sum_probs=49.1

Q ss_pred             CCCcHHHHHHHHHHHHHHHhcCCCC-EEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceec
Q psy3027           4 EWPNTYTFTKALAEDVLCKEGKGLP-LAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVP   82 (300)
Q Consensus         4 ~~pNtYt~TK~~aE~lv~~~~~~lP-v~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVP   82 (300)
                      .-+|.|..+|..+|+.+.+.  +++ ++|+|||+|+|...+.-++        ..++. ...+   .++ ........||
T Consensus       134 ~~~~~Y~~~K~~~E~~l~~~--~~~~~~IlRP~~i~G~~~~~~~~--------~~~~~-~~~~---~~~-~~~~~~~~I~  198 (232)
T d2bkaa1         134 SSNFLYLQVKGEVEAKVEEL--KFDRYSVFRPGVLLCDRQESRPG--------EWLVR-KFFG---SLP-DSWASGHSVP  198 (232)
T ss_dssp             TCSSHHHHHHHHHHHHHHTT--CCSEEEEEECCEEECTTGGGSHH--------HHHHH-HHHC---SCC-TTGGGGTEEE
T ss_pred             CccchhHHHHHHhhhccccc--cccceEEecCceeecCCCcCcHH--------HHHHH-HHhh---ccC-CcccCCCeEE
Confidence            44678999999999999774  455 8999999999976542111        11111 1111   122 2333345699


Q ss_pred             cccccc-cccccc
Q psy3027          83 STVSDG-PSEGVW   94 (300)
Q Consensus        83 VD~vvn-~i~aa~   94 (300)
                      ||.+|+ ++.++.
T Consensus       199 ~~dvA~a~i~~~~  211 (232)
T d2bkaa1         199 VVTVVRAMLNNVV  211 (232)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh
Confidence            999999 876663

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.90  E-value=0.00015  Score=59.61  Aligned_cols=71  Identities=14%  Similarity=0.080  Sum_probs=46.4

Q ss_pred             CCCcHHHHHHHHHHHHHHHhcCCCC-EEEecccEEeeccCCCccc-cccCCCChHHHHHHHhhcceeeeccCCCccccee
Q psy3027           4 EWPNTYTFTKALAEDVLCKEGKGLP-LAVLRPAVIVSTYREPVRG-WIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMV   81 (300)
Q Consensus         4 ~~pNtYt~TK~~aE~lv~~~~~~lP-v~IvRPsiV~~~~~eP~pG-w~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diV   81 (300)
                      .-.+.|..||..+|+.+.+.  ++| ++|+||++|+|..+++-.+ ++-.             .+.+.++    .....|
T Consensus       117 ~~~~~y~~~K~~~E~~l~~~--~~~~~~I~Rp~~v~G~~~~~~~~~~~~~-------------~~~~~~~----~~~~~i  177 (212)
T d2a35a1         117 KSSIFYNRVKGELEQALQEQ--GWPQLTIARPSLLFGPREEFRLAEILAA-------------PIARILP----GKYHGI  177 (212)
T ss_dssp             TCSSHHHHHHHHHHHHHTTS--CCSEEEEEECCSEESTTSCEEGGGGTTC-------------CCC--------CHHHHH
T ss_pred             ccccchhHHHHHHhhhcccc--ccccceeeCCcceeCCcccccHHHHHHH-------------HHhhccC----CCCcEE
Confidence            34678999999999998753  565 9999999999977654222 2111             1111111    112348


Q ss_pred             ccccccc-ccccc
Q psy3027          82 PSTVSDG-PSEGV   93 (300)
Q Consensus        82 PVD~vvn-~i~aa   93 (300)
                      +||++|+ ++.++
T Consensus       178 ~v~DvA~ai~~~~  190 (212)
T d2a35a1         178 EACDLARALWRLA  190 (212)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHH
Confidence            9999999 77665

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.90  E-value=0.00052  Score=55.93  Aligned_cols=95  Identities=14%  Similarity=0.119  Sum_probs=58.4

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      ..|..+|.+.|....+  .+++++|+||+.|+|......+........                  ..+...+.|++|+|
T Consensus       148 ~~~~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~------------------~~~~~~~~i~~~Dv  207 (252)
T d2q46a1         148 GNILVWKRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVRELLVGKDDE------------------LLQTDTKTVPRADV  207 (252)
T ss_dssp             CCHHHHHHHHHHHHHH--SSSCEEEEEECEEECSCTTSSCEEEESTTG------------------GGGSSCCEEEHHHH
T ss_pred             cchhhhhhhhhhhhhc--ccccceeecceEEECCCcchhhhhhccCcc------------------cccCCCCeEEHHHH
Confidence            3566666666665544  589999999999998765433322211100                  01223468999999


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCC-CcccHhHHHHH
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSAR-NPISWGKLDEL  129 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~-np~t~~~~~~~  129 (300)
                      ++ ++.++.+..       .. .++||++++.. ...++.++.++
T Consensus       208 a~a~~~~l~~~~-------~~-g~~~~i~~~~~~~~~~~~~~~~l  244 (252)
T d2q46a1         208 AEVCIQALLFEE-------AK-NKAFDLGSKPEGTSTPTKDFKAL  244 (252)
T ss_dssp             HHHHHHHTTCGG-------GT-TEEEEEEECCTTTSCCCCCHHHH
T ss_pred             HHHHHHHhCCcc-------cc-CcEEEEeeCCCCCChhHHHHHHH
Confidence            99 776663221       23 57999987532 34556676665

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.49  E-value=0.0016  Score=56.19  Aligned_cols=116  Identities=17%  Similarity=0.104  Sum_probs=81.0

Q ss_pred             cHHHHHHHHHHHHHHHhc--CCCCEEEecccEEeeccCCCccccccCCCChHHHHHH------HhhcceeeeccCCCccc
Q psy3027           7 NTYTFTKALAEDVLCKEG--KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVG------IATGVLHTHLINLNTVT   78 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~--~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~------~~~G~l~~~~~~~~~~~   78 (300)
                      +.|+.+|..+|.++....  .+....++||+.|.+....+.     ...+..+.+..      .+.|.--.+.++++..-
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  236 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFAT-----YDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  236 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCB-----TTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeecccccc-----ccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence            679999999999988763  489999999998886554221     11122222211      12233335677888889


Q ss_pred             ceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          79 DMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        79 diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |.+.||.+++ ++.+......      .. ..+||+..+..+++++.|+.+. .+..+
T Consensus       237 ~~~~v~D~~~~~~~~l~~~~~------~~-~~~~~i~~~~~~~~s~~e~~~~i~~~~~  287 (338)
T d1orra_         237 DVLHAEDMISLYFTALANVSK------IR-GNAFNIGGTIVNSLSLLELFKLLEDYCN  287 (338)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHH------HT-TCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred             eeecccchhhHHHHHHhcccc------cc-CccccccccccccccHHHHHHHHHHHHC
Confidence            9999999999 7766533221      23 5699998777789999999999 87766

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.87  E-value=0.0063  Score=52.99  Aligned_cols=117  Identities=11%  Similarity=-0.033  Sum_probs=76.4

Q ss_pred             cHHHHHHHHHHHHHHHhc-----------CCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCC
Q psy3027           7 NTYTFTKALAEDVLCKEG-----------KGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLN   75 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~-----------~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~   75 (300)
                      +.|+.+|..+|..+..+.           .++++++.||+-|+|..+-+..    +  .+..++.+ ..+--....++++
T Consensus       154 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~----~--~i~~~~~~-~~~~~~~~~~~~~  226 (356)
T d1rkxa_         154 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD----R--IVPDILRA-FEQSQPVIIRNPH  226 (356)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS----C--HHHHHHHH-HHTTCCEECSCTT
T ss_pred             CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhh----H--HHHHHHHH-HhCCCceEEeecc
Confidence            569999999999987642           2689999999999986542211    1  11222323 3333334667788


Q ss_pred             cccceeccccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          76 TVTDMVPSTVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        76 ~~~diVPVD~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ...+.+.|+.++. ++.++........   .. ....+...+...++++.++.+. .+...
T Consensus       227 ~~~~~~~v~D~~~a~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  283 (356)
T d1rkxa_         227 AIRPWQHVLEPLSGYLLLAQKLYTDGA---EY-AEGWNFGPNDADATPVKNIVEQMVKYWG  283 (356)
T ss_dssp             CEECCEETHHHHHHHHHHHHHHHHTCG---GG-CSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred             ccccccccccccchhhhhhhhhccccc---cc-ccccccccccccccccchhhhhhHHHhC
Confidence            8889999999999 7666644322111   11 2345555444578999999999 77776

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=93.15  E-value=0.037  Score=46.17  Aligned_cols=108  Identities=13%  Similarity=0.056  Sum_probs=62.8

Q ss_pred             cHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceeccccc
Q psy3027           7 NTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVS   86 (300)
Q Consensus         7 NtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~v   86 (300)
                      +.|..+|..+|+.+.+.... ..++.++.++.+... ...+         .+......+..  +...++...+.+.++++
T Consensus       126 ~~y~~~k~~~e~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~d~  192 (298)
T d1n2sa_         126 NVYGKTKLAGEKALQDNCPK-HLIFRTSWVYAGKGN-NFAK---------TMLRLAKERQT--LSVINDQYGAPTGAELL  192 (298)
T ss_dssp             SHHHHHHHHHHHHHHHHCSS-EEEEEECSEECSSSC-CHHH---------HHHHHHHHCSE--EEEECSCEECCEEHHHH
T ss_pred             chHhhhhhhhhhhHHhhhcc-cccccccceeeccCC-ccch---------hhhhhhcccce--eecccceeecccccchH
Confidence            78999999999999887543 444444444444221 1111         11122222221  22234456678888888


Q ss_pred             cc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          87 DG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        87 vn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      ++ +..+....... .   .. ..+||++++  +++++.++.+. .+...
T Consensus       193 ~~~~~~~i~~~~~~-~---~~-~~~~n~~~~--~~~~~~~~~~~i~~~~~  235 (298)
T d1n2sa_         193 ADCTAHAIRVALNK-P---EV-AGLYHLVAG--GTTTWHDYAALVFDEAR  235 (298)
T ss_dssp             HHHHHHHHHHHHHC-G---GG-CEEEECCCB--SCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhcc-c---cc-cccccccCC--CceecHHHHHHHHhhhh
Confidence            88 54443211111 1   23 579999987  78999999998 66554

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.01  E-value=0.053  Score=43.50  Aligned_cols=63  Identities=14%  Similarity=0.053  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhcceeeeccCCCcccceecccccc
Q psy3027           8 TYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLHTHLINLNTVTDMVPSTVSD   87 (300)
Q Consensus         8 tYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~~~~~~~~~~~diVPVD~vv   87 (300)
                      .|..+|..+|+++++  .+++.+|+||+.+.+...   .                  |.. .+..+++.....|.++.++
T Consensus       127 ~~~~~~~~~e~~l~~--~~~~~tiirp~~~~~~~~---~------------------~~~-~~~~~~~~~~~~i~~~DvA  182 (205)
T d1hdoa_         127 AVTDDHIRMHKVLRE--SGLKYVAVMPPHIGDQPL---T------------------GAY-TVTLDGRGPSRVISKHDLG  182 (205)
T ss_dssp             HHHHHHHHHHHHHHH--TCSEEEEECCSEEECCCC---C------------------SCC-EEESSSCSSCSEEEHHHHH
T ss_pred             ccchHHHHHHHHHHh--cCCceEEEecceecCCCC---c------------------ccE-EEeeCCCCCCCcCCHHHHH
Confidence            588899999999876  689999999999875322   1                  111 2333556667789999999


Q ss_pred             c-cccccc
Q psy3027          88 G-PSEGVW   94 (300)
Q Consensus        88 n-~i~aa~   94 (300)
                      + ++.++.
T Consensus       183 ~~~~~~l~  190 (205)
T d1hdoa_         183 HFMLRCLT  190 (205)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHHhC
Confidence            9 776663

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=85.20  E-value=0.24  Score=42.51  Aligned_cols=110  Identities=6%  Similarity=-0.061  Sum_probs=64.6

Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCEEEecccEEeeccCCCccccccCCCChHHHHHHHhhccee-eeccCCCcccceec-c
Q psy3027           6 PNTYTFTKALAEDVLCKEGKGLPLAVLRPAVIVSTYREPVRGWIDNVYGPIGMLVGIATGVLH-THLINLNTVTDMVP-S   83 (300)
Q Consensus         6 pNtYt~TK~~aE~lv~~~~~~lPv~IvRPsiV~~~~~eP~pGw~d~~~g~~~~~~~~~~G~l~-~~~~~~~~~~diVP-V   83 (300)
                      ...|..+|...|..+.+  ..++.+++||+...+....+..+......        ...|... ..+.+++.....+- +
T Consensus       122 ~~~~~~~k~~~~~~~~~--~~~~~~~vr~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~  191 (350)
T d1xgka_         122 AVPMWAPKFTVENYVRQ--LGLPSTFVYAGIYNNNFTSLPYPLFQMEL--------MPDGTFEWHAPFDPDIPLPWLDAE  191 (350)
T ss_dssp             CCTTTHHHHHHHHHHHT--SSSCEEEEEECEEGGGCBSSSCSSCBEEE--------CTTSCEEEEESSCTTSCEEEECHH
T ss_pred             chhhhhhHHHHHHHHHh--hccCceeeeeceeeccccccccccccccc--------cccccceeeecccCCCcceEEEeH
Confidence            45677899999988765  46899999999987654322211110000        0112211 23445666666554 4


Q ss_pred             ccccc-cccccccccCCCCCCCCCCCcEEEeeCCCCCcccHhHHHHH-HHHcC
Q psy3027          84 TVSDG-PSEGVWQKKFPTSVFRPDPIPIYNFVGSARNPISWGKLDEL-ATVCH  134 (300)
Q Consensus        84 D~vvn-~i~aa~~~~~~~~~~~~~~~~iy~~~s~~~np~t~~~~~~~-~~~~~  134 (300)
                      |+++. +..+..+...  .   .. +.+|++++.   .+|+.|+.+. .+..+
T Consensus       192 ~Dva~~v~~~l~~~~~--~---~~-G~~~~~~g~---~~T~~eia~~l~~~~G  235 (350)
T d1xgka_         192 HDVGPALLQIFKDGPQ--K---WN-GHRIALTFE---TLSPVQVCAAFSRALN  235 (350)
T ss_dssp             HHHHHHHHHHHHHCHH--H---HT-TCEEEECSE---EECHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCChh--h---cC-CeEEEEeCC---cCCHHHHHHHHHHHHC
Confidence            67777 4444322111  0   13 568988753   5899999999 88776