Psyllid ID: psy3183

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
Protein Sequence
MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNWDCDF
Secondary Structure (PSIPRED)
cHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccHHHHHcccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccccccccHHHHccHHHccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccc
Coil and Loop (DISEMBL)
MQTYNMIINVgidkipfpkhvTRTAQSLIKALCKespaerlgyqrggivdikkhkwfqgfdwdglrnqtltppiipvikgptdtsnfdrysaendikgptdtsnfdrysaendvppdetsnwdcdf
Flexible Loop (DISEMBL)
MQTYNMIInvgidkipfpkHVTRTAQSLIKALCkespaerlgyqrggivdIKKHKWFQGFDWDGLRNQTLtppiipvikgptdtSNFDRYSAEndikgptdtsnfdrysaendvppdetsnwdcdf
Low Complexity Region (SEG)
MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNWDCDF
Disordered region (IsUnstruct)
***YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG**********************************************
Disordered Region (DISOPRED)
MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDI**PTDTSNFDRYSAENDVPPDETSNWDCDF
Disordered Region (DISEMBL)
MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAE***************
Disordered Region (DISPRO)
MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSA**********************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNWDCDF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	126	2.2.26 [Sep-21-2011]
Q03042	768	cGMP-dependent protein ki	yes	N/A	0.849	0.139	0.539	4e-33
Q13976	671	cGMP-dependent protein ki	no	N/A	0.857	0.160	0.5	7e-31
P00516	671	cGMP-dependent protein ki	yes	N/A	0.857	0.160	0.5	7e-31
O77676	671	cGMP-dependent protein ki	yes	N/A	0.857	0.160	0.5	1e-30
P0C605	671	cGMP-dependent protein ki	no	N/A	0.857	0.160	0.492	3e-30
O76360	780	cGMP-dependent protein ki	yes	N/A	0.849	0.137	0.456	9e-29
A8X6H1	749	cGMP-dependent protein ki	N/A	N/A	0.849	0.142	0.456	9e-29
P32023	934	cGMP-dependent protein ki	no	N/A	0.682	0.092	0.620	5e-27
Q03043	1088	cGMP-dependent protein ki	no	N/A	0.682	0.079	0.620	1e-26
Q13237	762	cGMP-dependent protein ki	no	N/A	0.849	0.140	0.444	9e-26

>sp|Q03042|KGP1_DROME cGMP-dependent protein kinase, isozyme 1 OS=Drosophila melanogaster GN=Pkg21D PE=1 SV=2

 Score =  139 bits (351), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 68/126 (53%), Positives = 79/126 (62%), Gaps = 19/126 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           MQTYN+I+  GID I FPKH++R A  LIK LC++ P+ERLGYQ GGI DIKKHKWF GF
Sbjct: 662 MQTYNLILK-GIDMIAFPKHISRWAVQLIKRLCRDVPSERLGYQTGGIQDIKKHKWFLGF 720

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           DWDGL +Q L PP +  I  PTD   FDR+        P D +           PPDE S
Sbjct: 721 DWDGLASQLLIPPFVRPIAHPTDVRYFDRF--------PCDLNE----------PPDELS 762

Query: 121 NWDCDF 126
            WD DF
Sbjct: 763 GWDADF 768

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 2

>sp|Q13976|KGP1_HUMAN cGMP-dependent protein kinase 1 OS=Homo sapiens GN=PRKG1 PE=1 SV=3

 Score =  132 bits (332), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 84/126 (66%), Gaps = 18/126 (14%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct: 564 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 622

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND                 + PPD+ S
Sbjct: 623 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDND-----------------EPPPDDNS 665

Query: 121 NWDCDF 126
            WD DF
Sbjct: 666 GWDIDF 671

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|P00516|KGP1_BOVIN cGMP-dependent protein kinase 1 OS=Bos taurus GN=PRKG1 PE=1 SV=2

 Score =  132 bits (332), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 84/126 (66%), Gaps = 18/126 (14%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct: 564 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 622

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND                 + PPD+ S
Sbjct: 623 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDND-----------------EPPPDDNS 665

Query: 121 NWDCDF 126
            WD DF
Sbjct: 666 GWDIDF 671

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|O77676|KGP1_RABIT cGMP-dependent protein kinase 1 OS=Oryctolagus cuniculus GN=PRKG1 PE=1 SV=3

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 84/126 (66%), Gaps = 18/126 (14%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct: 564 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 622

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND                 + PPD+ S
Sbjct: 623 NWEGLRKGTLTPPIIPSVASPTDTSNFDGFPEDND-----------------EPPPDDNS 665

Query: 121 NWDCDF 126
            WD DF
Sbjct: 666 GWDIDF 671

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|P0C605|KGP1_MOUSE cGMP-dependent protein kinase 1 OS=Mus musculus GN=Prkg1 PE=1 SV=1

 Score =  130 bits (327), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 84/126 (66%), Gaps = 18/126 (14%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct: 564 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 622

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           +W+GLR  TLTPPIIP +  PTDTSNFD +  ++D                 + PPD+ S
Sbjct: 623 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDSD-----------------EPPPDDNS 665

Query: 121 NWDCDF 126
            WD DF
Sbjct: 666 GWDIDF 671

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|O76360|EGL4_CAEEL cGMP-dependent protein kinase egl-4 OS=Caenorhabditis elegans GN=egl-4 PE=1 SV=2

 Score =  125 bits (314), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 58/127 (45%), Positives = 80/127 (62%), Gaps = 20/127 (15%)

Query: 1   MQTYNMIINVGIDKIPFP-KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           M+TY +I+  G+D +  P + + +TA +L+K LC+++P ERLG   GG+ DI+KH+WF G
Sbjct: 673 MKTYTLILK-GVDALEIPNRRIGKTATALVKKLCRDNPGERLGSGSGGVNDIRKHRWFMG 731

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDET 119
           FDW+GLR++TL PPI+P +  P D +NFD Y        P D          NDVPPDE 
Sbjct: 732 FDWEGLRSRTLKPPILPKVSNPADVTNFDNY--------PPD----------NDVPPDEF 773

Query: 120 SNWDCDF 126
           S WD  F
Sbjct: 774 SGWDEGF 780

Promotes chemoreceptor gene expression in response to increased cGMP levels by antagonizing the gene repression functions of the class II HDAC hda-4 and the mef-2 transcription factor. Represses body size and lifespan through the dbl-1 and insulin pathways, respectively. May also signal through daf-3 and/or daf-5. Role in egg-laying and dauer formation.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|A8X6H1|EGL4_CAEBR cGMP-dependent protein kinase egl-4 OS=Caenorhabditis briggsae GN=egl-4 PE=3 SV=2

 Score =  125 bits (313), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 20/127 (15%)

Query: 1   MQTYNMIINVGIDKIPFP-KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           M+TY +I+  G+D +  P + + +TA +L+K LC+++P ERLG   GG+ DI+KH+WF G
Sbjct: 642 MKTYTLILK-GVDALEIPNRRIGKTATALVKKLCRDNPGERLGSGSGGVNDIRKHRWFMG 700

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDET 119
           FDW+GLR +TL PPI+P +  P D +NFD Y        P D          NDVPPDE 
Sbjct: 701 FDWEGLRTKTLKPPILPKVNNPADVTNFDNY--------PPD----------NDVPPDEF 742

Query: 120 SNWDCDF 126
           S WD  F
Sbjct: 743 SGWDEGF 749

Promotes chemoreceptor gene expression in response to increased cGMP levels by antagonizing the gene repression functions of the class II HDAC hda-4 and the mef-2 transcription factor. Represses body size and lifespan through the dbl-1 and insulin pathways, respectively. May also signal through daf-3 and/or daf-5. Role in egg-laying and dauer formation.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|P32023|KGP25_DROME cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 OS=Drosophila melanogaster GN=for PE=2 SV=3

 Score =  119 bits (298), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 54/87 (62%), Positives = 69/87 (79%), Gaps = 1/87 (1%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID I FP+++TR A +LIK LC+++PAERLGYQRGGI +I+KHKWF GF
Sbjct: 827 MRTYNIILK-GIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQRGGISEIQKHKWFDGF 885

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNF 87
            W GL+N TL PPI P +K   DT+NF
Sbjct: 886 YWWGLQNCTLEPPIKPAVKSVVDTTNF 912

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q03043|KGP24_DROME cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B OS=Drosophila melanogaster GN=for PE=1 SV=3

 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/87 (62%), Positives = 69/87 (79%), Gaps = 1/87 (1%)

Query: 1    MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            M+TYN+I+  GID I FP+++TR A +LIK LC+++PAERLGYQRGGI +I+KHKWF GF
Sbjct: 981  MRTYNIILK-GIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQRGGISEIQKHKWFDGF 1039

Query: 61   DWDGLRNQTLTPPIIPVIKGPTDTSNF 87
             W GL+N TL PPI P +K   DT+NF
Sbjct: 1040 YWWGLQNCTLEPPIKPAVKSVVDTTNF 1066

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q13237|KGP2_HUMAN cGMP-dependent protein kinase 2 OS=Homo sapiens GN=PRKG2 PE=1 SV=1

 Score =  115 bits (288), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/126 (44%), Positives = 78/126 (61%), Gaps = 19/126 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M TYN+I+  GI+K+ FP+ +TR  + LI+ LC+++P ERLG  + GI DIKKH+W  GF
Sbjct: 656 MMTYNLILK-GIEKMDFPRKITRRPEDLIRRLCRQNPTERLGNLKNGINDIKKHRWLNGF 714

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           +W+GL+ ++L  P+   +KGP D S FD+Y  E   KG               +PPDE S
Sbjct: 715 NWEGLKARSLPSPLQRELKGPIDHSYFDKYPPE---KG---------------MPPDELS 756

Query: 121 NWDCDF 126
            WD DF
Sbjct: 757 GWDKDF 762

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
242024535	1045	cGMP-dependent protein kinase, isozyme,	0.849	0.102	0.579	1e-35
321476601	655	hypothetical protein DAPPUDRAFT_207381 [	0.849	0.163	0.571	9e-34
260830800	573	hypothetical protein BRAFLDRAFT_277757 [	0.849	0.186	0.539	2e-33
241557549	592	cAMP-dependent protein kinase catalytic	0.849	0.180	0.547	4e-33
157111148	1288	cgmp-dependent protein kinase [Aedes aeg	0.849	0.083	0.555	6e-33
91094575	948	PREDICTED: similar to cgmp-dependent pro	0.849	0.112	0.551	2e-32
322785849	526	hypothetical protein SINV_08925 [Solenop	0.857	0.205	0.523	2e-32
291220954	247	PREDICTED: protein kinase, cGMP-dependen	0.849	0.433	0.547	2e-32
325297092	733	PKG [Aplysia californica] gi|37964177|gb	0.849	0.145	0.539	4e-32
405972747	760	cGMP-dependent protein kinase, isozyme 1	0.849	0.140	0.539	5e-32

>gi|242024535|ref|XP_002432683.1| cGMP-dependent protein kinase, isozyme, putative [Pediculus humanus corporis] gi|212518153|gb|EEB19945.1| cGMP-dependent protein kinase, isozyme, putative [Pediculus humanus corporis]

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 19/126 (15%)

Query: 1    MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            M+TYN+I+  GID I FPKH+T+ AQSLIK LC++SP+ERLGYQRGGI DIKKHKWFQGF
Sbjct: 939  MRTYNIILK-GIDVIDFPKHITKGAQSLIKRLCRDSPSERLGYQRGGIQDIKKHKWFQGF 997

Query: 61   DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
            DW GL+ + L PP+ P+++ PTDT                  SNFD YS E  VPPDE S
Sbjct: 998  DWSGLKQRALIPPVAPIVRSPTDT------------------SNFDSYSKETVVPPDEFS 1039

Query: 121  NWDCDF 126
             WD  F
Sbjct: 1040 CWDAKF 1045

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321476601|gb|EFX87561.1| hypothetical protein DAPPUDRAFT_207381 [Daphnia pulex]

 Score =  147 bits (372), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 72/126 (57%), Positives = 85/126 (67%), Gaps = 19/126 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID+I FP+ V R AQ+LIK LC+E PAERLGYQRGGI DIKKH+WFQ F
Sbjct: 545 MKTYNIILK-GIDQIEFPRIVNRAAQALIKRLCREVPAERLGYQRGGIDDIKKHRWFQVF 603

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           DWDGL N+TL  PI PV++GP D                  +SNFD Y  E + PPDE S
Sbjct: 604 DWDGLSNRTLAAPITPVVRGPAD------------------SSNFDTYPKEKESPPDELS 645

Query: 121 NWDCDF 126
            WD DF
Sbjct: 646 GWDVDF 651

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260830800|ref|XP_002610348.1| hypothetical protein BRAFLDRAFT_277757 [Branchiostoma floridae] gi|229295713|gb|EEN66358.1| hypothetical protein BRAFLDRAFT_277757 [Branchiostoma floridae]

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/126 (53%), Positives = 87/126 (69%), Gaps = 19/126 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID + FP+ + + A +LIK LCKE+P+ERLGYQ+ G+ DIKKHKWFQGF
Sbjct: 467 MKTYNLILK-GIDAVEFPRKIGKNANNLIKKLCKENPSERLGYQKNGMNDIKKHKWFQGF 525

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           DWDGL  Q+  PPI+P ++GP+DTSNFD+YS E DI                  PP+E S
Sbjct: 526 DWDGLTTQSTQPPIVPKVRGPSDTSNFDKYSRETDI------------------PPEEMS 567

Query: 121 NWDCDF 126
            WD DF
Sbjct: 568 GWDTDF 573

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|241557549|ref|XP_002399970.1| cAMP-dependent protein kinase catalytic subunit, putative [Ixodes scapularis] gi|215499728|gb|EEC09222.1| cAMP-dependent protein kinase catalytic subunit, putative [Ixodes scapularis]

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 19/126 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID + FP++++R A SLIK LC+E+P+ERLGYQ+GGI+DIKKHKWFQ F
Sbjct: 486 MKTYNVILK-GIDMLDFPRNMSRNAVSLIKRLCRENPSERLGYQKGGIMDIKKHKWFQSF 544

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           DWDGL+ +TL PP  P I+GP D+SNFD Y             NF       ++P DETS
Sbjct: 545 DWDGLQARTLQPPFEPQIRGPADSSNFDVYP-----------RNF-------EIPQDETS 586

Query: 121 NWDCDF 126
            WD DF
Sbjct: 587 GWDEDF 592

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157111148|ref|XP_001651409.1| cgmp-dependent protein kinase [Aedes aegypti] gi|108878512|gb|EAT42737.1| AAEL005754-PA [Aedes aegypti]

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 70/126 (55%), Positives = 83/126 (65%), Gaps = 19/126 (15%)

Query: 1    MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            M+TYN+I+  GID + FPKH++R A SLIK LC++ P ERLGYQRGGI DIKKHKWFQGF
Sbjct: 1182 MKTYNIILK-GIDMVNFPKHMSRAAVSLIKRLCRDVPTERLGYQRGGIQDIKKHKWFQGF 1240

Query: 61   DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
            DW+GL NQTL  P+ P +KGP D SNFD + A+  I                  PPDE S
Sbjct: 1241 DWEGLANQTLKSPLQPKLKGPLDMSNFDVFPADGHI------------------PPDEVS 1282

Query: 121  NWDCDF 126
             WD  F
Sbjct: 1283 GWDEGF 1288

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91094575|ref|XP_968718.1| PREDICTED: similar to cgmp-dependent protein kinase [Tribolium castaneum] gi|270016394|gb|EFA12840.1| hypothetical protein TcasGA2_TC006940 [Tribolium castaneum]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 20/127 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKH-VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           M+TYN+I+  GID I F KH + R AQSLIK LC+++P+ERLGYQ+GGI DIKKHKWFQG
Sbjct: 841 MKTYNLILK-GIDMIDFAKHHIGRAAQSLIKKLCRDAPSERLGYQKGGIQDIKKHKWFQG 899

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDET 119
           FDWDGL NQTL  PI                     ++G  DT+NFD +  +ND+PPDE 
Sbjct: 900 FDWDGLVNQTLPSPI------------------RQPVRGCCDTTNFDCFGKDNDIPPDEL 941

Query: 120 SNWDCDF 126
           SNWD +F
Sbjct: 942 SNWDLEF 948

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785849|gb|EFZ12468.1| hypothetical protein SINV_08925 [Solenopsis invicta]

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/126 (52%), Positives = 90/126 (71%), Gaps = 18/126 (14%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID I FP+ +TR A +LIK LC+++PAERLGYQRGGI +I+KHKWF GF
Sbjct: 419 MKTYNIILK-GIDAIEFPRSITRNAMALIKKLCRDNPAERLGYQRGGISEIQKHKWFDGF 477

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           +W+GL+ +TL PPI+P ++G TDT+NFD Y+A++D                  +PPD+ S
Sbjct: 478 NWEGLKTRTLEPPILPRVQGATDTTNFDAYAADSD-----------------PLPPDDIS 520

Query: 121 NWDCDF 126
            WD DF
Sbjct: 521 GWDNDF 526

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291220954|ref|XP_002730488.1| PREDICTED: protein kinase, cGMP-dependent, type I beta-like, partial [Saccoglossus kowalevskii]

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 19/126 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID + FPK ++R A +LIK LC+++P+ERLGYQ+ GI+DIKKHKWFQGF
Sbjct: 141 MKTYNIILK-GIDIVEFPKKISRNATNLIKKLCRDNPSERLGYQKNGILDIKKHKWFQGF 199

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           DWDGL+ QT+ PPI P +KGP+D SNFD YS + DI                  PP+E S
Sbjct: 200 DWDGLQKQTIIPPIQPKVKGPSDFSNFDNYSKDTDI------------------PPNELS 241

Query: 121 NWDCDF 126
            WD DF
Sbjct: 242 GWDIDF 247

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|325297092|ref|NP_001191554.1| PKG [Aplysia californica] gi|37964177|gb|AAR06171.1| PKG [Aplysia californica]

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 68/126 (53%), Positives = 84/126 (66%), Gaps = 19/126 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID I FPK ++R+A  LIK LC+++P ERLGY + GI DI+K+KWFQGF
Sbjct: 627 MRTYNIILK-GIDHIEFPKKISRSAHVLIKKLCRDNPMERLGYGKNGISDIRKNKWFQGF 685

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           DWDGL + TLTPPI+P +K PTDTSNFD Y        P D           D+  DE S
Sbjct: 686 DWDGLMDLTLTPPIVPKVKNPTDTSNFDSY--------PRDM----------DIAADELS 727

Query: 121 NWDCDF 126
            WD DF
Sbjct: 728 GWDIDF 733

Source: Aplysia californica

Species: Aplysia californica

Genus: Aplysia

Family: Aplysiidae

Class: Gastropoda

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|405972747|gb|EKC37497.1| cGMP-dependent protein kinase, isozyme 1 [Crassostrea gigas]

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/126 (53%), Positives = 85/126 (67%), Gaps = 19/126 (15%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TYN+I+  GID I FP+ + + A SLIK LC+++PAERLGY + GI+DI+K+KWFQGF
Sbjct: 654 MKTYNIILK-GIDVIEFPRRIGKNAASLIKKLCRDNPAERLGYGKNGIIDIRKNKWFQGF 712

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           DWDGL ++ L PPIIP                   +KGP D SNFD Y   +DVPPDETS
Sbjct: 713 DWDGLLHRKLVPPIIP------------------QVKGPNDYSNFDSYPKSSDVPPDETS 754

Query: 121 NWDCDF 126
            WD DF
Sbjct: 755 GWDFDF 760

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
UNIPROTKB|J9NWY9	474	PRKG1 "Uncharacterized protein	0.833	0.221	0.556	2.3e-30
UNIPROTKB|Q5JP05	283	PRKG1 "cGMP-dependent protein	0.833	0.371	0.556	2.3e-30
UNIPROTKB|J9JHE0	489	PRKG1 "Uncharacterized protein	0.833	0.214	0.556	2.4e-30
UNIPROTKB|F1SD02	459	PRKG1 "Uncharacterized protein	0.833	0.228	0.547	7.9e-30
UNIPROTKB|Q5SQU3	659	PRKG1 "cGMP-dependent protein	0.833	0.159	0.556	1.4e-29
UNIPROTKB|P00516	671	PRKG1 "cGMP-dependent protein	0.833	0.156	0.556	1.5e-29
UNIPROTKB|Q13976	671	PRKG1 "cGMP-dependent protein	0.833	0.156	0.556	1.5e-29
UNIPROTKB|F1NE85	685	F1NE85 "cGMP-dependent protein	0.833	0.153	0.556	1.6e-29
UNIPROTKB|F1MY76	686	PRKG1 "cGMP-dependent protein	0.833	0.153	0.556	1.6e-29
UNIPROTKB|O77676	671	PRKG1 "cGMP-dependent protein	0.833	0.156	0.556	2e-29

UNIPROTKB|J9NWY9 PRKG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   367 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 425

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   426 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWD 471

GO:0005524 "ATP binding" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

UNIPROTKB|Q5JP05 PRKG1 "cGMP-dependent protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   176 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 234

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   235 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWD 280

GO:0005524 "ATP binding" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

UNIPROTKB|J9JHE0 PRKG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 335 (123.0 bits), Expect = 2.4e-30, P = 2.4e-30
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   382 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 440

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   441 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWD 486

GO:0005524 "ATP binding" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

UNIPROTKB|F1SD02 PRKG1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 58/106 (54%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   352 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 410

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  ++D   P D S +D
Sbjct:   411 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDSDEPPPDDNSGWD 456

GO:0090331 "negative regulation of platelet aggregation" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q5SQU3 PRKG1 "cGMP-dependent protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 335 (123.0 bits), Expect = 1.4e-29, P = 1.4e-29
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   552 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 610

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   611 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWD 656

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P00516 PRKG1 "cGMP-dependent protein kinase 1" [Bos taurus (taxid:9913)]

 Score = 335 (123.0 bits), Expect = 1.5e-29, P = 1.5e-29
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   564 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 622

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   623 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWD 668

GO:0005829 "cytosol" evidence=TAS

GO:0043087 "regulation of GTPase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005246 "calcium channel regulator activity" evidence=ISS

GO:0004692 "cGMP-dependent protein kinase activity" evidence=ISS

GO:0090331 "negative regulation of platelet aggregation" evidence=ISS

GO:0030553 "cGMP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q13976 PRKG1 "cGMP-dependent protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 335 (123.0 bits), Expect = 1.5e-29, P = 1.5e-29
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   564 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 622

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   623 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWD 668

GO:0005524 "ATP binding" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005246 "calcium channel regulator activity" evidence=IDA

GO:0090331 "negative regulation of platelet aggregation" evidence=IMP

GO:0043087 "regulation of GTPase activity" evidence=IMP

GO:0030036 "actin cytoskeleton organization" evidence=TAS

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

UNIPROTKB|F1NE85 F1NE85 "cGMP-dependent protein kinase" [Gallus gallus (taxid:9031)]

 Score = 335 (123.0 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   578 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 636

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   637 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWD 682

GO:0005524 "ATP binding" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0090331 "negative regulation of platelet aggregation" evidence=IEA

UNIPROTKB|F1MY76 PRKG1 "cGMP-dependent protein kinase" [Bos taurus (taxid:9913)]

 Score = 335 (123.0 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   579 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 637

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   638 NWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWD 683

GO:0090331 "negative regulation of platelet aggregation" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|O77676 PRKG1 "cGMP-dependent protein kinase 1" [Oryctolagus cuniculus (taxid:9986)]

 Score = 334 (122.6 bits), Expect = 2.0e-29, P = 2.0e-29
 Identities = 59/106 (55%), Positives = 79/106 (74%)

Query:     1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
             M+TYN+I+  GID I FPK + + A +LIK LC+++P+ERLG  + G+ DI+KHKWF+GF
Sbjct:   564 MKTYNIILR-GIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGF 622

Query:    61 DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
             +W+GLR  TLTPPIIP +  PTDTSNFD +  +ND   P D S +D
Sbjct:   623 NWEGLRKGTLTPPIIPSVASPTDTSNFDGFPEDNDEPPPDDNSGWD 668

GO:0004692 "cGMP-dependent protein kinase activity" evidence=ISS

GO:0005246 "calcium channel regulator activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0043087 "regulation of GTPase activity" evidence=ISS

GO:0090331 "negative regulation of platelet aggregation" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q03042	KGP1_DROME	2, ., 7, ., 1, 1, ., 1, 2	0.5396	0.8492	0.1393	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	126
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-30
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-25
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-21
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-19
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	3e-19
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	4e-19
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-18
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	9e-18
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-17
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-17
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	8e-15
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	8e-14
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	9e-14
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-13
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-13
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-13
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-13
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-13
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-12
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-12
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-12
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-12
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-12
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-12
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-12
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-12
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	8e-12
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-11
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-11
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-11
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	4e-11
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-11
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	6e-11
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	6e-11
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	6e-11
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-10
smart00133	64	smart00133, S_TK_X, Extension to Ser/Thr-type prot	4e-10
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-10
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	5e-10
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	5e-10
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	9e-10
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-09
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-09
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	1e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-08
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-08
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-08
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	7e-08
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	8e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	9e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	1e-07
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	4e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	4e-07
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	9e-07
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	1e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-06
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-06
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-06
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-05
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	7e-05
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-04
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	0.001
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	0.002

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  109 bits (276), Expect = 2e-30
 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I+     K+ FP   +  A+ LI+ L +    +RLG  + G+ DIK H WF G 
Sbjct: 204 IQIYEKILE---GKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRY 90
           DW  L  + +  P IP +KGP DTSNFD Y
Sbjct: 261 DWIALLQRKIEAPFIPKVKGPGDTSNFDDY 290

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 96.9 bits (242), Expect = 1e-25
 Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+ YN  I  G  K+ FP ++ + A+ LIK L + +P ERLG  +GGI DIKKHKWF GF
Sbjct: 200 MEIYN-DILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258

Query: 61  DWDG 64
           DW+G
Sbjct: 259 DWEG 262

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 85.6 bits (212), Expect = 3e-21
 Identities = 33/77 (42%), Positives = 45/77 (58%)

Query: 14  KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPP 73
           K+ FP+H+   A+ LIK L       RLG  + G  D+K H+WF+  DWD +  + L PP
Sbjct: 214 KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPP 273

Query: 74  IIPVIKGPTDTSNFDRY 90
           I+P +    DTSNFD Y
Sbjct: 274 IVPKVSHDGDTSNFDDY 290

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 80.9 bits (200), Expect = 2e-19
 Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 4   YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD 63
           ++ I+N   D++ +P+ ++R A S+++ L + +P  RLG       D+KK  +F+  +WD
Sbjct: 210 FDSIVN---DEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWD 266

Query: 64  GLRNQTLTPPIIPVIKGPTDTSNFD 88
            L  + + PP +P IKGP D SNFD
Sbjct: 267 DLLARKIKPPFVPTIKGPEDVSNFD 291

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 80.6 bits (199), Expect = 3e-19
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 11/91 (12%)

Query: 2   QTYNMIINVGIDKIPFPKHVT---RTAQSLIKAL-CKESPAERLGYQRGGIVDIKKHKWF 57
           +TY  I+N   +   FP  VT     A+ LI+ L C  SP  RLG  R G+ D K H +F
Sbjct: 215 ETYGKIMNHK-EHFQFPPDVTDVSEEAKDLIRRLIC--SPETRLG--RNGLQDFKDHPFF 269

Query: 58  QGFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           +G DWD +RN   T P +P +  PTDTSNFD
Sbjct: 270 EGIDWDNIRN--STAPYVPEVSSPTDTSNFD 298

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 80.9 bits (200), Expect = 4e-19
 Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 1   MQTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
            +TY  IIN   + + FP    ++  A+ LIK LC E    RLG    G+ +IK H +F+
Sbjct: 245 QETYRKIINWK-ETLQFPDEVPLSPEAKDLIKRLCCE-AERRLG--NNGVNEIKSHPFFK 300

Query: 59  GFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSN 104
           G DW+ +R +    PIIP +K  TDTSNFD +  E D+  PT    
Sbjct: 301 GVDWEHIRERP--APIIPELKSITDTSNFDDFE-EIDLDVPTSPGP 343

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 78.1 bits (193), Expect = 3e-18
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 1   MQTYNMIINVGID-KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
            +TYN IIN     + P    V+  A  LI  L  + P +RLG       +IK H +F+G
Sbjct: 236 QETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCD-PEDRLG----SFEEIKSHPFFKG 290

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
            DW+ LR     PP +P +  P DTSNFD 
Sbjct: 291 IDWENLRETK--PPFVPELSSPLDTSNFDD 318

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 76.6 bits (189), Expect = 9e-18
 Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 13  DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTP 72
           D++ +P+ +++ A+S++K+   ++P +RLG    G  DIK H +F+  DWD L  + + P
Sbjct: 211 DEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKP 270

Query: 73  PIIPVIKGPTDTSNFDR-YSAENDIKGPTD 101
           P  P IKG  D SNFD  ++ E  +  P D
Sbjct: 271 PFKPKIKGRFDVSNFDDEFTKEKPVLTPPD 300

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 76.0 bits (187), Expect = 1e-17
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            + Y  I+     ++ FP      A+ L+K L +    +RLG  +GG+ D+K H +F G 
Sbjct: 221 FRIYEKIL---AGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTS 103
           +WD L  +    PI   +K P DTSNF++Y      + P  T+
Sbjct: 278 NWDKLYARYYPAPIPVRVKSPGDTSNFEKYPDSPVDRLPPLTA 320

Length = 329

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 75.2 bits (185), Expect = 2e-17
 Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 6/101 (5%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +T  MI+     K+  P+ ++  AQSL++AL K +PA RLG    G+ +IK+H +F   D
Sbjct: 205 ETMTMILKA---KLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID 261

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDT 102
           W+ L  + + PP  P +  P DT  FD    E   + P D+
Sbjct: 262 WNKLYRREIKPPFKPAVGRPDDTFYFD---PEFTSRTPKDS 299

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 68.7 bits (168), Expect = 8e-15
 Identities = 27/76 (35%), Positives = 45/76 (59%)

Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +PK +++ A S+ K L  + PA+RLG    G  DI++H +F+  DW+ L  + + PP 
Sbjct: 218 VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPF 277

Query: 75  IPVIKGPTDTSNFDRY 90
            P +KG     NFD++
Sbjct: 278 KPKVKGRRSAENFDKF 293

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 65.7 bits (160), Expect = 8e-14
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 2   QTYNMIINVGIDKIPFPKHV-TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            T  M  N+   K+ FPK+V +   +  +K L   +P  RLG  R   V++K+H +F   
Sbjct: 201 DTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDA-VELKEHPFFADI 259

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           DWD L  + +TPP  P++    D SNFD
Sbjct: 260 DWDLLSKKQITPPFKPIVDSDEDVSNFD 287

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 66.0 bits (161), Expect = 9e-14
 Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           IP    ++R A  LI  LC     +RLG  + G  +IK H +F+G D+  L  +    P 
Sbjct: 265 IPSQAKLSREASDLILRLCC-GAEDRLG--KNGADEIKAHPFFKGIDFASLIRR-QKAPY 320

Query: 75  IPVIKGPTDTSNFDRYSAE---NDIKGPTDTSNFDRYS 109
           IP I  PTDTSNFD    E   +D  G +      + +
Sbjct: 321 IPKITHPTDTSNFDPVDPEKLRSDDSGESSPDRNVKPN 358

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 65.0 bits (159), Expect = 1e-13
 Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 15  IPFPKH--VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTP 72
           + FP    V+ +A+ LI+ L  + P++RLG +RG   +IK+H +F+G +W  +R+   TP
Sbjct: 249 VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGA-AEIKQHPFFRGVNWALIRHT--TP 305

Query: 73  PIIPVIKGPTD 83
           PIIP      D
Sbjct: 306 PIIPRPDDGID 316

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 65.2 bits (159), Expect = 1e-13
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 12  IDKI-----PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR 66
           IDKI       P ++T  A+ L+K L K +P+ RLG   G   +++ H +F+  +WD L 
Sbjct: 209 IDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLL 268

Query: 67  NQTLTPPIIPVIKGPTDTSNFD-RYSAENDIKGPTDTS 103
            + + PP  P+++   D S FD +++ +  +  P D++
Sbjct: 269 ARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDST 306

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 64.8 bits (158), Expect = 2e-13
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 5/88 (5%)

Query: 17  FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 76
           FP+ +++ A+  +  L +  P +RLG   G   DI++H +F+G DW+ L  + + PP  P
Sbjct: 215 FPRWISKEAKDCLSKLFERDPTKRLG-VDG---DIRQHPFFRGIDWERLEKREIPPPFKP 270

Query: 77  VIKGPTDTSNFDR-YSAENDIKGPTDTS 103
            +K P+D SNFDR ++ E     P D  
Sbjct: 271 KVKSPSDASNFDREFTNEKVRLSPVDKK 298

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 65.0 bits (158), Expect = 2e-13
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 11/92 (11%)

Query: 1   MQTYNMIINVGIDKIPFPKHVT---RTAQSLIKAL-CKESPAERLGYQRGGIVDIKKHKW 56
           ++TY  I+N   ++  FP H+T     A+ LI+ L C  S   RLG  + GI D KKH +
Sbjct: 214 VETYGKIMNHE-ERFQFPSHITDVSEEAKDLIQRLIC--SRERRLG--QNGIEDFKKHAF 268

Query: 57  FQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           F+G DW+ +RN  L  P IP +  P+DTSNFD
Sbjct: 269 FEGIDWENIRN--LEAPYIPDVSSPSDTSNFD 298

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 63.7 bits (155), Expect = 4e-13
 Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + Y+ I+N     +    +++ +A+ L++ L ++   +RLG  +   ++IK H +F   +
Sbjct: 203 EMYDNILN---KPLRLKPNISVSARHLLEGLLQKDRTKRLG-AKDDFLEIKNHVFFSSIN 258

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           WD L N+ +TPP  P + GP D  +FD
Sbjct: 259 WDDLVNKKITPPFNPNVSGPMDLKHFD 285

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 62.5 bits (152), Expect = 1e-12
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 14  KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPP 73
           K PFPK ++  A+  I+ L ++ P +RLG    G  +IK H +FQG DWD L  + +  P
Sbjct: 228 KPPFPKTMSAEARDFIQKLLEKDPKKRLGA--NGADEIKNHPFFQGIDWDDLAAKRIPAP 285

Query: 74  IIP 76
             P
Sbjct: 286 FKP 288

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 62.6 bits (152), Expect = 1e-12
 Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)

Query: 13  DKIPFPKHVTRTAQSLIKALCKESPAERLG--YQRGGIVDIKKHKWFQGFDWDGLRNQTL 70
           D + +P  +++ A S++KA   ++P +RLG    +GG   IK+H +F+  DW  L  + +
Sbjct: 211 DDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKI 270

Query: 71  TPPIIPVIKGPTDTSNFDR-YSAENDIKGPTDTS 103
            PP  P IK   D +NFD+ ++ E  +  P D +
Sbjct: 271 KPPFKPKIKTKRDVNNFDQDFTKEEPVLTPVDPA 304

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 62.0 bits (150), Expect = 2e-12
 Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 11/92 (11%)

Query: 1   MQTYNMIINVGIDKIPFPKHVT---RTAQSLIKAL-CKESPAERLGYQRGGIVDIKKHKW 56
           ++TY  I+N   ++  FP  VT     A+ LI+ L C  S   RLG  + GI D K+H +
Sbjct: 214 VETYGKIMNHK-ERFQFPAQVTDVSEDAKDLIRRLIC--SREHRLG--QNGIEDFKQHPF 268

Query: 57  FQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           F G DWD +RN     P IP +  PTDTSNFD
Sbjct: 269 FTGIDWDNIRN--CEAPYIPEVSSPTDTSNFD 298

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 61.5 bits (149), Expect = 2e-12
 Identities = 27/72 (37%), Positives = 40/72 (55%)

Query: 16  PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPII 75
           PFP  +   AQ L+  L ++ P +RLG    G  +IK+H +F+G DW+ L  + + PP  
Sbjct: 229 PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFR 288

Query: 76  PVIKGPTDTSNF 87
           P I+   D  NF
Sbjct: 289 PSIRNELDVGNF 300

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 61.5 bits (149), Expect = 3e-12
 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 13  DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTP 72
           + + FP    R A+ L+  L    P  RLGY   G  +IK H +F    W  L  + + P
Sbjct: 208 EPLRFPDGFDRDAKDLLIGLLSRDPTRRLGY--NGAQEIKNHPFFSQLSWKKLLMKGIQP 265

Query: 73  PIIPVIKGPTDTSNFD 88
           P  P +    DTSNFD
Sbjct: 266 PFKPAVSSAIDTSNFD 281

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 61.4 bits (149), Expect = 3e-12
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 11/105 (10%)

Query: 2   QTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           +TYN I+N     + FP+   V+     LI++L      ERLGY+      +  H +F  
Sbjct: 216 KTYNNIMNFQ-RFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEG-----LCCHPFFSK 268

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSN 104
            DW+ +RN    PP +P +K   DTSNFD     +  +  + T+ 
Sbjct: 269 IDWNNIRNSL--PPFVPTLKSDDDTSNFDEPEKNSTRRSQSSTTQ 311

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 61.1 bits (148), Expect = 3e-12
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 13  DKIPFPKHVTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGFDWDGLRNQTLT 71
           D++ +P  +++ A  ++KA   ++P  RLG    GG   I +H +F+  DW+ L  + + 
Sbjct: 211 DEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIE 270

Query: 72  PPIIPVIKGPTDTSNFD-RYSAENDIKGPTDTS 103
           PP  P IK   D SNFD  +  E+ +  P + S
Sbjct: 271 PPFRPRIKSREDVSNFDPDFIKEDPVLTPIEES 303

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 60.2 bits (147), Expect = 5e-12
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 57
            + Y  I+    D + FP+ ++  A+ LI  L ++ P +RLG   GG  +IK H +F
Sbjct: 199 KEIYEKILK---DPLRFPEFLSPEARDLISGLLQKDPTKRLGS--GGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 60.0 bits (145), Expect = 8e-12
 Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 12  IDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLT 71
           +++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +W  +  + L 
Sbjct: 209 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 268

Query: 72  PPIIPVIKGPTDTSNF-DRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNW 122
           PP  P +    DT  F D ++A++    P      DRY +   +  D+ +++
Sbjct: 269 PPFKPQVTSEVDTRYFDDEFTAQSITITPP-----DRYDSLGLLELDQRTHF 315

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 58.9 bits (142), Expect = 2e-11
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +PK +++ A ++ K L  + P +RLG    G  DIK+H +F+  DW+ L  + + PP 
Sbjct: 218 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPY 277

Query: 75  IPVIKGPTDTSNFDRY 90
            P   G  D  NFD++
Sbjct: 278 KPKACG-RDAENFDKF 292

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 58.3 bits (141), Expect = 3e-11
 Identities = 25/77 (32%), Positives = 43/77 (55%)

Query: 12  IDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLT 71
           +++I FP+ ++  A+SL+  L K+ P +RLG       +I +H++F   +W  +  + L 
Sbjct: 209 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLE 268

Query: 72  PPIIPVIKGPTDTSNFD 88
           PP  P +   TDT  FD
Sbjct: 269 PPFKPQVTSETDTRYFD 285

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 58.5 bits (141), Expect = 4e-11
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +PK +++ A S+ K L  + P++RLG    G  DI++H +F+  DWD L N+ + PP 
Sbjct: 218 VSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPF 277

Query: 75  IPVIKGPTDTSNFDRY 90
            P + G     NFD++
Sbjct: 278 KPKVCG-KGAENFDKF 292

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 57.9 bits (140), Expect = 4e-11
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 25  AQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDT 84
           AQ LI  L +++P ERLG   GG  ++K+H++F G DW+GL  Q      IP ++   DT
Sbjct: 246 AQDLISRLLRQNPLERLG--TGGAFEVKQHRFFLGLDWNGLLRQ--KAEFIPQLESEDDT 301

Query: 85  SNFD 88
           S FD
Sbjct: 302 SYFD 305

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 57.9 bits (140), Expect = 4e-11
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 1   MQTYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLGYQR-GGIVDIKKHKWFQ 58
             T + +  V ++K I  P+ ++  A S++K    + P ERLG     G  DIK H +F+
Sbjct: 207 QNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266

Query: 59  GFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
             DWD L  + + PP  P I+   D  NFD
Sbjct: 267 NIDWDLLEQKQVLPPYKPNIESDRDLDNFD 296

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 57.7 bits (139), Expect = 6e-11
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 12  IDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLT 71
           +++I FP+ ++  A+SL+  L K+ P +RLG       +I +HK+F G  W  +  + L 
Sbjct: 210 MEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLV 269

Query: 72  PPIIPVIKGPTDTSNFD 88
           PP  P +   TDT  FD
Sbjct: 270 PPFKPQVTSETDTRYFD 286

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 57.7 bits (139), Expect = 6e-11
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 9   NVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ 68
           ++ +D   +P+ +TR A+ ++  L    P  RLG  +G   DI++H +F+  DW  L  +
Sbjct: 207 SIRMDNPCYPRWLTREAKDILVKLFVREPERRLGV-KG---DIRQHPFFREIDWSALEER 262

Query: 69  TLTPPIIPVIKGPTDTSNFDR 89
            + PP  P +K   D SNFD+
Sbjct: 263 EIEPPFKPKVKSANDCSNFDK 283

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 57.7 bits (139), Expect = 6e-11
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 1   MQTYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQ 58
           M T + +  V ++K I  P+ ++  A  ++K    + P ERLG Q + G  DIK H +F+
Sbjct: 205 MNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFR 264

Query: 59  GFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
             DWD L  + +TPP  P I       NFD
Sbjct: 265 SIDWDLLEKKQVTPPFKPQITDDYGLENFD 294

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 56.0 bits (135), Expect = 2e-10
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 13/122 (10%)

Query: 2   QTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           +TY  IIN   + + FP   H++  A+ LI+ L   +   RLG  RGG  +IK H +F+G
Sbjct: 255 ETYRKIINWR-ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLG--RGGAHEIKSHPFFRG 310

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDET 119
            DWD +R   +  P IP +K  TDTS F       D       +   + +A         
Sbjct: 311 VDWDTIRQ--IRAPFIPQLKSITDTSYF-----PTDELEQVPEAPALKQAAPAQQEESVE 363

Query: 120 SN 121
            +
Sbjct: 364 LD 365

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|214529 smart00133, S_TK_X, Extension to Ser/Thr-type protein kinases

 Score = 51.6 bits (124), Expect = 4e-10
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 59  GFDWDGLRNQTLTPPIIPVIKGPTDTSNFD-RYSAENDIKGPTDTSNFDR 107
           G DWD L N+ + PP +P IK PTDTSNFD  ++ E  +  P D+     
Sbjct: 2   GIDWDKLENKEIEPPFVPKIKSPTDTSNFDPEFTEETPVLTPVDSPLSGG 51

Length = 64

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 55.4 bits (133), Expect = 5e-10
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + Y+ I+N  +   P   ++T +A+ L++ L ++   +RLG  +   ++IK H +F   +
Sbjct: 203 EMYDNILNKPLQLKP---NITNSARHLLEGLLQKDRTKRLGA-KDDFMEIKNHIFFSPIN 258

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           WD L N+ +TPP  P + GP D  +FD
Sbjct: 259 WDDLINKKITPPFNPNVSGPNDLRHFD 285

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 55.3 bits (133), Expect = 5e-10
 Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 9   NVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ 68
           ++ +D   +P+ +T+ ++ +++ L +  P  RLG     + +I+ H +F+  +W  L  +
Sbjct: 207 SIRVDTPHYPRWITKESKDILEKLFERDPTRRLGV----VGNIRGHPFFKTINWTALEKR 262

Query: 69  TLTPPIIPVIKGPTDTSNFDR 89
            L PP  P +K P+D SNFDR
Sbjct: 263 ELDPPFKPKVKSPSDYSNFDR 283

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 55.1 bits (132), Expect = 5e-10
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 10/109 (9%)

Query: 14  KIPFPKHVTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGFDWDGLRNQTLTP 72
           +I  P+ ++  A S++K+   + P ERLG + + G  DI+ H +F+  DWD +  + + P
Sbjct: 221 QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVP 280

Query: 73  PIIPVIKGPTDTSNFD-RYSAE--------NDIKGPTDTSNFDRYSAEN 112
           P  P I G     NFD +++ E        +DI    D S F+ +   N
Sbjct: 281 PFKPNISGEFGLDNFDAQFTNEPVQLTPDDDDIVRKIDQSEFEGFEYIN 329

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 54.3 bits (130), Expect = 9e-10
 Identities = 25/77 (32%), Positives = 42/77 (54%)

Query: 12  IDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLT 71
           ++ I FP+ ++  A+SL+  L  + P +RLG       +I +H +F G +W  + ++ L 
Sbjct: 209 MEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLV 268

Query: 72  PPIIPVIKGPTDTSNFD 88
           PP  P +   TDT  FD
Sbjct: 269 PPFKPQVTSETDTRYFD 285

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 53.8 bits (129), Expect = 2e-09
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           I FPK +    + L+K L      +R G  + G  ++K+H WF   DW  L ++ +  P 
Sbjct: 245 IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPY 304

Query: 75  IPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAEND 113
            P  K   D+SNF+R           D +  D+ + END
Sbjct: 305 KPKYKNVFDSSNFERVQ--------EDLTIADKITNEND 335

Length = 340

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 52.5 bits (126), Expect = 4e-09
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 13/117 (11%)

Query: 3   TYNMIINVGIDKIPFPKHV--TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           TY+ I++   + + FP  +  ++ A+ LI A   +    RLG  R G+ +IK H +F+  
Sbjct: 255 TYSKIMDHK-NSLTFPDDIEISKQAKDLICAFLTDRE-VRLG--RNGVDEIKSHPFFKND 310

Query: 61  DW--DGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
            W  D +R      P++P +    DTSNFD      D     +T    +  A N +P
Sbjct: 311 QWTFDNIRETV--APVVPELSSDIDTSNFDDIE---DDDKNEETFPLPKAFAGNQLP 362

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 51.6 bits (123), Expect = 1e-08
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 11/114 (9%)

Query: 2   QTYNMIINVGIDKIPFPKHV--TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           +TY  ++N   + + FP  V  +  A+ LI   C +S   R+G    G+ +IK H +F+G
Sbjct: 243 ETYRKVMNWK-ETLVFPPEVPISEKAKDLILRFCTDS-ENRIG--SNGVEEIKSHPFFEG 298

Query: 60  FDWDGLRNQTLTPPIIPV-IKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAEN 112
            DW  +R +   P  IP+ IK   DTSNFD +  E+DI  P + +    Y +++
Sbjct: 299 VDWGHIRER---PAAIPIEIKSIDDTSNFDEFP-ESDILQPAENTIEPDYKSKD 348

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 25  AQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDT 84
           A  LI       P+ R G     + DIK H +F+  DW+ LR   L PP +P ++   DT
Sbjct: 233 AWDLITK-LINDPSRRFG----SLEDIKNHPFFKEVDWNELR--ELKPPFVPELESEIDT 285

Query: 85  SNFDRYSAEND 95
             FD +  E+D
Sbjct: 286 GYFDDFENEDD 296

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 21  VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG 80
            + TA S+++ L ++    RLG  +   ++I++H +F+   W  L  + + PP  P ++G
Sbjct: 219 ASLTAWSILEELLEKDRQRRLGA-KEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEG 277

Query: 81  PTDTSNFD 88
           P D SNFD
Sbjct: 278 PDDISNFD 285

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 50.6 bits (121), Expect = 2e-08
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 13  DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTP 72
             + +P   +  A+ L +AL ++ P +RLG + G   ++++H  F+  +W  L    L P
Sbjct: 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEP 272

Query: 73  PIIP 76
           P IP
Sbjct: 273 PFIP 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)

Query: 1   MQTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
            + +  I+N    KI +P+   V+  A  LI  L    P +RLG     I +IK H +F+
Sbjct: 207 EEIFQNILN---GKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGA--KSIEEIKNHPFFK 261

Query: 59  GFDW 62
           G DW
Sbjct: 262 GIDW 265

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 49.2 bits (117), Expect = 7e-08
 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 12/97 (12%)

Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG-LRNQTLTPP 73
           IP    ++  A  LI  LC+  P +RLG  + G  +IK H +F+  D+   LR Q+   P
Sbjct: 269 IPPQAKLSPEASDLIIKLCR-GPEDRLG--KNGADEIKAHPFFKTIDFSSDLRQQS--AP 323

Query: 74  IIPVIKGPTDTSNFDR------YSAENDIKGPTDTSN 104
            IP I  PTDTSNFD       +S ++      DT N
Sbjct: 324 YIPKITHPTDTSNFDPVDPDKLWSDDDKEGNVNDTLN 360

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 48.8 bits (116), Expect = 8e-08
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           Q Y+ I++     +  P   T  A  L+  L  +    RLG  +   ++IK H +F   +
Sbjct: 203 QMYDNILH---KPLQLPGGKTVAACDLLVGLLHKDQRRRLG-AKADFLEIKNHVFFSPIN 258

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           WD L ++ +TPP  P + GP D  +FD
Sbjct: 259 WDDLYHKRITPPYNPNVAGPADLRHFD 285

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 48.7 bits (116), Expect = 9e-08
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 10/77 (12%)

Query: 15  IPFP---KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLT 71
           IP+P   + ++  AQ+ I+ L    P +R      G+ ++K+H  F G DW+ L+NQ  T
Sbjct: 597 IPWPEGEEKLSVNAQNAIEILLTMDPTKR-----AGLKELKQHPLFHGVDWENLQNQ--T 649

Query: 72  PPIIPVIKGPTDTSNFD 88
            P IP     TDTS F+
Sbjct: 650 MPFIPQPDDETDTSYFE 666

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 48.1 bits (114), Expect = 1e-07
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 11/105 (10%)

Query: 2   QTYNMIINVGIDKIPFPKHV--TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           +TY  ++N   + + FP  V  +  A+ LI   C E    R+G    G+ +IK + +F+G
Sbjct: 243 ETYKKVMNWK-ETLIFPPEVPISEKAKDLILRFCCEW-EHRIGAP--GVEEIKTNPFFEG 298

Query: 60  FDWDGLRNQTLTPPIIPV-IKGPTDTSNFDRYSAENDIKGPTDTS 103
            DW+ +R +   P  IP+ IK   DTSNFD +  ++DI  PT  +
Sbjct: 299 VDWEHIRER---PAAIPIEIKSIDDTSNFDEFP-DSDILKPTVAT 339

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 16/55 (29%), Positives = 28/55 (50%)

Query: 22  TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 76
           +  A+S+ + L  + P  RLG +  G  ++K H +F+  ++  L    L PP  P
Sbjct: 229 SEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 46.5 bits (110), Expect = 4e-07
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 16  PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPII 75
           P+P+ ++  A+ +I+ L  + P +RLG       +IKKH +FQ  +WD L  + +  P  
Sbjct: 230 PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAAKKVPAPFK 289

Query: 76  P 76
           P
Sbjct: 290 P 290

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 45.7 bits (108), Expect = 9e-07
 Identities = 18/62 (29%), Positives = 31/62 (50%)

Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           +  P   +   +SL++ L +     RLG    G  ++K+H +F+  DW  +  Q   PP+
Sbjct: 216 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYPPPL 275

Query: 75  IP 76
           IP
Sbjct: 276 IP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 18  PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 57
           P+ V+  A+SL++ L + +P ERLG    G+ DIK H +F
Sbjct: 198 PEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 13  DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTP 72
           D + +P   +  ++S  +AL  + P +RLG++ G    ++ H  F+  +W  L    L P
Sbjct: 216 DSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPP 275

Query: 73  PIIP 76
           P +P
Sbjct: 276 PFVP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 40/111 (36%), Positives = 46/111 (41%), Gaps = 21/111 (18%)

Query: 14  KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG-LRNQTLTP 72
            IP    ++  A  LI  LC  S  ERLG  R G  DIK H +F   D+   +R Q    
Sbjct: 268 HIPPQVKLSPEAVDLITKLCC-SAEERLG--RNGADDIKAHPFFSEVDFSSDIRTQP--A 322

Query: 73  PIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNWD 123
           P +P I  P DTSNFD    E               S  ND   D T  WD
Sbjct: 323 PYVPKISHPMDTSNFDPVEEE---------------SPWNDASGDSTRTWD 358

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 13/117 (11%)

Query: 3   TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 59
           TY+ I++   + + FP+   +++ A++LI A   +    RLG  R G+ +IK+H +F+  
Sbjct: 255 TYSKIMDHK-NSLNFPEDVEISKHAKNLICAFLTDREV-RLG--RNGVEEIKQHPFFKND 310

Query: 60  -FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
            ++WD +R      P++P +    D+SNFD    E+D KG  +T    +    N +P
Sbjct: 311 QWNWDNIRET--AAPVVPELSSDIDSSNFD--DIEDD-KGDVETFPIPKAFVGNQLP 362

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           +  P   +   +SL++ L +   ++RLG    G  ++K+H +F+G DW  +  Q   PP+
Sbjct: 216 VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYPPPL 275

Query: 75  IP 76
           IP
Sbjct: 276 IP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 43.9 bits (103), Expect = 4e-06
 Identities = 21/52 (40%), Positives = 29/52 (55%)

Query: 25  AQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 76
           A+SL K L  + P ERLG Q GG  ++K+H  F+  ++  L    L PP  P
Sbjct: 232 ARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 41.1 bits (96), Expect = 4e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%)

Query: 22  TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 76
           +  A+S+ K L  + P +RLG Q  G  ++K+H +F+  ++  L    L PP +P
Sbjct: 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 13/117 (11%)

Query: 3   TYNMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 59
           TY+ I+N   + + FP    +++ A++LI A   +    RLG  R G+ +IK+H +F+  
Sbjct: 255 TYSKIMNHK-NSLTFPDDNDISKEAKNLICAFLTDREV-RLG--RNGVEEIKRHLFFKND 310

Query: 60  -FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
            + W+ LR+     P++P +    DTSNFD    E D KG  +T    +    N +P
Sbjct: 311 QWAWETLRDTV--APVVPDLSSDIDTSNFD--DIEED-KGEEETFPIPKAFVGNQLP 362

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 13  DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTP 72
           D+  + +  +  A+S+ + L  ++P ERLG +  G   +K+H  F+  ++  L    L P
Sbjct: 220 DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEP 279

Query: 73  PIIP 76
           P  P
Sbjct: 280 PFCP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 57
            T+  I+ +      FP +    A+ LI+ L    P +RLG    G  ++K H +F
Sbjct: 229 LTFQKILKLEYS---FPPNFPPDAKDLIEKLLVLDPQDRLGVNE-GYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)

Query: 9   NVGIDKIPFPKHV----TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD 63
           N+   +I +P+ V    +  A  LI  L    PA+RLG    G  +IK H +F+  +WD
Sbjct: 204 NILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGAN--GYQEIKSHPFFKSINWD 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 57
           ++ +  I        P    ++  A+ LI+ L  + P +RL        +  +H +F
Sbjct: 203 LELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRL-----TAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	126
KOG0694|consensus	694		99.92
KOG0614|consensus	732		99.91
KOG0696|consensus	683		99.88
KOG0690|consensus	516		99.87
KOG0605|consensus	550		99.86
KOG0616|consensus	355		99.86
KOG0695|consensus	593		99.83
KOG0598|consensus	357		99.8
KOG0612|consensus	1317		99.75
KOG0986|consensus	591		99.74
KOG0610|consensus	459		99.62
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.56
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.53
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.53
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.5
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.48
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.48
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.47
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.46
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.44
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.44
KOG0608|consensus	1034		99.43
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.43
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.42
KOG0603|consensus	612		99.42
KOG0592|consensus	604		99.42
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.41
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.41
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.39
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.39
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.38
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.37
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.37
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.31
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.31
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.31
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.27
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.24
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.23
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.21
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.2
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.2
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.18
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.17
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.17
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.15
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.14
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.13
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.13
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.13
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.1
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.04
smart00133	64	S_TK_X Extension to Ser/Thr-type protein kinases.	99.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.98
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.97
KOG0606|consensus	1205		98.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.95
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.91
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.88
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.82
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.81
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.79
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.79
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.77
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.77
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.72
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.72
KOG0033|consensus	355		98.71
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.7
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.65
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.63
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.59
KOG0588|consensus	786		98.58
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.58
KOG0606|consensus	1205		98.58
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.56
KOG0575|consensus	592		98.55
KOG0615|consensus	475		98.5
KOG0580|consensus	281		98.49
KOG4717|consensus	864		98.48
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.46
KOG0583|consensus	370		98.45
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.43
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.42
KOG0585|consensus	576		98.39
KOG0604|consensus	400		98.38
KOG0599|consensus	411		98.28
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.28
KOG0607|consensus	463		98.25
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.22
KOG0581|consensus	364		98.2
KOG0603|consensus	612		98.04
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.01
KOG0032|consensus	382		97.98
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	97.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	97.86
PTZ00036	440	glycogen synthase kinase; Provisional	97.86
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	97.83
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	97.75
PHA03209	357	serine/threonine kinase US3; Provisional	97.74
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	97.7
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	97.66
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	97.66
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	97.65
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	97.65
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	97.64
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	97.63
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	97.63
KOG0597|consensus	808		97.62
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	97.61
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	97.59
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	97.58
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	97.58
PHA03207	392	serine/threonine kinase US3; Provisional	97.57
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	97.57
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	97.56
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	97.55
PLN00034	353	mitogen-activated protein kinase kinase; Provision	97.53
PTZ00284	467	protein kinase; Provisional	97.52
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	97.52
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	97.52
KOG0198|consensus	313		97.52
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	97.51
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	97.5
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	97.49
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	97.48
KOG0660|consensus	359		97.48
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	97.47
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	97.47
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	97.47
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	97.47
KOG0578|consensus	550		97.45
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	97.45
PF00433	48	Pkinase_C: Protein kinase C terminal domain; Inter	97.44
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	97.41
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.39
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	97.39
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	97.38
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	97.35
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	97.35
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	97.35
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	97.34
PHA03210	501	serine/threonine kinase US3; Provisional	97.34
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	97.31
PHA03211	461	serine/threonine kinase US3; Provisional	97.31
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	97.31
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	97.31
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	97.31
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	97.31
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	97.3
KOG0579|consensus	1187		97.29
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	97.29
PLN00009	294	cyclin-dependent kinase A; Provisional	97.29
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	97.29
PHA03212	391	serine/threonine kinase US3; Provisional	97.29
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	97.29
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	97.29
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	97.28
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	97.27
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	97.27
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	97.26
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	97.25
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	97.24
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	97.23
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	97.22
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	97.22
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	97.22
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	97.21
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	97.21
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	97.2
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	97.19
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	97.18
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	97.18
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	97.17
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	97.16
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	97.16
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	97.14
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	97.13
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	97.13
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	97.12
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	97.12
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	97.12
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	97.11
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	97.11
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	97.1
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	97.09
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	97.09
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	97.08
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	97.08
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	97.08
PTZ00024	335	cyclin-dependent protein kinase; Provisional	97.07
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	97.07
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	97.07
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	97.03
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	97.02
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	97.02
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	97.01
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.01
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	96.98
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	96.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	96.93
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	96.91
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	96.91
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	96.91
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	96.86
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	96.86
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	96.85
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	96.84
KOG0586|consensus	596		96.82
KOG0593|consensus	396		96.81
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	96.8
KOG0671|consensus	415		96.8
KOG0661|consensus	538		96.78
KOG0983|consensus	391		96.76
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	96.74
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	96.73
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	96.71
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	96.71
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	96.7
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	96.7
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	96.7
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	96.69
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	96.68
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	96.68
PTZ00283	496	serine/threonine protein kinase; Provisional	96.67
KOG0596|consensus	677		96.64
KOG0663|consensus	419		96.64
KOG0665|consensus	369		96.63
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	96.6
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	96.58
KOG0668|consensus	338		96.56
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	96.55
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	96.55
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	96.53
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	96.53
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	96.52
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	96.52
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	96.52
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	96.51
KOG0659|consensus	318		96.49
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	96.46
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	96.45
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	96.44
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	96.41
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	96.4
PTZ00267	478	NIMA-related protein kinase; Provisional	96.39
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	96.34
KOG1290|consensus	590		96.32
KOG1167|consensus	418		96.3
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	96.25
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	96.23
KOG0582|consensus	516		96.16
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	96.15
KOG4236|consensus	888		96.12
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	96.06
KOG0584|consensus	632		96.06
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	96.03
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	96.02
KOG0666|consensus	438		96.01
KOG1027|consensus	903		95.99
KOG0658|consensus	364		95.92
KOG0669|consensus	376		95.85
PHA02988	283	hypothetical protein; Provisional	95.67
KOG4645|consensus	1509		95.59
KOG0594|consensus	323		95.47
KOG0670|consensus	752		95.47
KOG0667|consensus	586		95.4
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	95.39
KOG0201|consensus	467		95.28
KOG0662|consensus	292		95.2
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	95.16
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	95.05
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	95.03
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	95.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	94.94
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	94.91
KOG1151|consensus	775		94.87
KOG0611|consensus	668		94.83
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	94.82
PTZ00266	1021	NIMA-related protein kinase; Provisional	94.71
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	94.71
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	94.63
KOG0574|consensus	502		94.6
KOG0600|consensus	560		94.39
KOG1989|consensus	738		94.27
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	94.26
KOG0590|consensus	601		94.22
KOG4279|consensus	1226		94.14
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	94.03
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	94.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	93.95
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	93.93
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	93.88
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	93.84
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	93.66
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	93.57
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	93.54
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	93.51
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	93.5
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	93.45
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	93.39
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	93.29
KOG2345|consensus	302		93.28
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	93.26
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	93.25
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	93.17
PLN00181	793	protein SPA1-RELATED; Provisional	93.17
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	93.17
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	93.08
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	93.04
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	93.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	92.83
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	92.82
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	92.79
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	92.68
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	92.63
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	92.6
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	92.59
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	92.55
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	92.54
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	92.53
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	92.42
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	92.31
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	92.21
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	92.15
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	92.14
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	92.05
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	91.99
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	91.88
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	91.85
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	91.84
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	91.74
KOG0589|consensus	426		91.66
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	91.65
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	91.6
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	91.6
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	91.44
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	91.41
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	91.39
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	91.31
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	91.28
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	91.18
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	91.07
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	91.05
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	91.02
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	91.01
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	90.69
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	90.57
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	90.34
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	90.17
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	90.14
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	90.13
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	90.1
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	89.98
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	89.94
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	89.78
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	89.64
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	89.31
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	89.16
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	88.89
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	88.75
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	88.7
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	88.69
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	87.6
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	87.54
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	87.47
KOG1035|consensus	1351		87.26
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	87.14
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	87.04
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	87.0
KOG0591|consensus	375		85.57
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	82.34
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	82.3

>KOG0694|consensus

Probab=99.92  E-value=1.7e-25  Score=179.46  Aligned_cols=109  Identities=33%  Similarity=0.749  Sum_probs=102.2

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++|..|+   .+.+.||.++|.++.+++++||+++|.+|||++.+|+++|+.||||+.|+|++|++|+++|||+|.++++
T Consensus       575 e~FdsI~---~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~  651 (694)
T KOG0694|consen  575 EVFDSIV---NDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGP  651 (694)
T ss_pred             HHHHHHh---cCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCCh
Confidence            6899999   4589999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~~~  113 (126)
                      .|.+|||. |+.|.+.+++.        ++.+|.+|+|.++
T Consensus       652 ~D~snFd~eFt~e~p~Lt~~~~~~l~~~~q~~F~~Fs~~~~  692 (694)
T KOG0694|consen  652 EDVSNFDEEFTSEKPALTPSDPRPLTEEEQEAFRDFSFVAE  692 (694)
T ss_pred             hhhcccchhhhcCCCccCCCCccccchhhHHHhcCccccCC
Confidence            99999997 99999998864        3779999999864

>KOG0614|consensus

Probab=99.91  E-value=1.1e-24  Score=171.07  Aligned_cols=107  Identities=64%  Similarity=1.272  Sum_probs=101.5

Q ss_pred             ChHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         1 ~~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      |++|+.|+ +|++.+.||..++..|.+||++|+..+|.+|||...+|+++|+.|.||.++||+.+..+.++||++|.+.+
T Consensus       625 mktYn~IL-kGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~  703 (732)
T KOG0614|consen  625 MKTYNLIL-KGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVAN  703 (732)
T ss_pred             HHHHHHHH-hhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCC
Confidence            67999999 99899999999999999999999999999999998999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCC-CCCCCCCCCCCCC
Q psy3183          81 PTDTSNFDRYSAENDIKGPTDTSNFDRYSAEND-VPPDETSNWDCDF  126 (126)
Q Consensus        81 ~~d~~~fd~~~~e~~~~~~~~~~~f~~f~~~~~-~~~~~~~~~~~~~  126 (126)
                      +.|++|||.|..                  ++. +|++++||||.||
T Consensus       704 ptD~s~Fd~~p~------------------dnd~pppde~SGWD~dF  732 (732)
T KOG0614|consen  704 PTDVSNFDNFPP------------------DNDEPPPDELSGWDKDF  732 (732)
T ss_pred             cccchhccCCCc------------------ccCCCCchhcccCCCCC
Confidence            999999999877                  554 6779999999998

>KOG0696|consensus

Probab=99.88  E-value=4.6e-23  Score=159.30  Aligned_cols=109  Identities=31%  Similarity=0.635  Sum_probs=102.3

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++|+.|+ ..  .+.||..+|.+|.++++.||++.|.+|||++..|-.+|+.||||+.|||+.++.++++|||.|.++..
T Consensus       557 elF~aI~-eh--nvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~  633 (683)
T KOG0696|consen  557 ELFQAIM-EH--NVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCG  633 (683)
T ss_pred             HHHHHHH-Hc--cCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccccC
Confidence            6899999 43  89999999999999999999999999999988889999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~~~  113 (126)
                      .+.+|||. |+.+...++|.        |++.|.||+|.|.
T Consensus       634 r~~eNFD~~Ft~~~~~lTPpD~~v~~nldq~eF~gFsfvNp  674 (683)
T KOG0696|consen  634 RDAENFDKFFTREPTDLTPPDKLVMMNLDQSEFEGFSFVNP  674 (683)
T ss_pred             CchhhhhHHHhcCCCCCCCchHHHHhcCchhhcCceeeeCh
Confidence            99999998 89998888875        5889999999985

>KOG0690|consensus

Probab=99.87  E-value=7.3e-23  Score=154.41  Aligned_cols=109  Identities=26%  Similarity=0.606  Sum_probs=99.7

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +||..|+ .+  .++||..+|++|+.|+.+||.+||.+|+|.+..++.+|+.|+||++|+|.++..+++.|||.|++.+.
T Consensus       375 kLFeLIl-~e--d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSe  451 (516)
T KOG0690|consen  375 KLFELIL-ME--DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSE  451 (516)
T ss_pred             HHHHHHH-hh--hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccc
Confidence            5889999 55  89999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCCCC------------CCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPTD------------TSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~~------------~~~f~~f~~~~~  113 (126)
                      .|+++||. |+.+...++|.+            +.+|..|+|..+
T Consensus       452 tDTryFD~EFT~q~v~lTPP~r~~~~~~~~~e~~~~FpQFsy~~~  496 (516)
T KOG0690|consen  452 TDTRYFDEEFTSQPVTLTPPDRYGSTVDEDEERRPHFPQFSYSAS  496 (516)
T ss_pred             cchhhhhhhhhcceeEecCCCCCCcccchhhhhccCCcceeeecc
Confidence            99999997 998776666543            559999999876

>KOG0605|consensus

Probab=99.86  E-value=2.7e-22  Score=157.62  Aligned_cols=107  Identities=33%  Similarity=0.625  Sum_probs=91.2

Q ss_pred             ChHHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCC
Q psy3183           1 MQTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI   78 (126)
Q Consensus         1 ~~l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~   78 (126)
                      +++|++|+ ++...+.+|.  .+|.+|+|||.+||+ ||.+|+|.  +|++||+.||||++|+|+.|....  |||+|.+
T Consensus       394 ~~T~rkI~-nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~--~G~~EIK~HPfF~~v~W~~l~~~~--apfvP~v  467 (550)
T KOG0605|consen  394 QETYRKIV-NWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGS--KGAEEIKKHPFFKGVDWDHLREMP--APFVPQV  467 (550)
T ss_pred             HHHHHHHH-HHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCc--ccHHHHhcCCccccCCcchhhcCC--CCCCCCC
Confidence            47899999 7755688885  578999999999999 99999995  899999999999999999999887  9999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-------------------CCCCCCCCCccCCC
Q psy3183          79 KGPTDTSNFDRYSAENDIKGP-------------------TDTSNFDRYSAEND  113 (126)
Q Consensus        79 ~~~~d~~~fd~~~~e~~~~~~-------------------~~~~~f~~f~~~~~  113 (126)
                      .+..|+.|||.|.++......                   ..+..|.||||.+-
T Consensus       468 ~~~~DT~yFddF~e~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~FvgfTyk~~  521 (550)
T KOG0605|consen  468 NSELDTQYFDDFPEEDSMTPTADKSGPSRKMLSMVDTNNSSKDINFVGFTYKNF  521 (550)
T ss_pred             CCcccccccccCcccccCcccccccccchhhhhcccccCCcccccccceeeecc
Confidence            999999999998876543221                   22447999999763

>KOG0616|consensus

Probab=99.86  E-value=4.5e-22  Score=147.80  Aligned_cols=92  Identities=40%  Similarity=0.835  Sum_probs=86.5

Q ss_pred             ChHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCccc-CCC
Q psy3183           1 MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP-VIK   79 (126)
Q Consensus         1 ~~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P-~~~   79 (126)
                      +++|++|+ .+  ++.||+.+|.+++|||++||++|-++|+|..++|..+|+.||||++++|.++..+++.||+.| .+.
T Consensus       247 ~~iY~KI~-~~--~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~  323 (355)
T KOG0616|consen  247 IQIYEKIL-EG--KVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIH  323 (355)
T ss_pred             HHHHHHHH-hC--cccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCCcccc
Confidence            46899999 77  999999999999999999999999999999999999999999999999999999999999987 788


Q ss_pred             CCCCCCCCCCCCCCCC
Q psy3183          80 GPTDTSNFDRYSAEND   95 (126)
Q Consensus        80 ~~~d~~~fd~~~~e~~   95 (126)
                      ...|++|||.+..+..
T Consensus       324 ~~gdtsnfd~y~e~~~  339 (355)
T KOG0616|consen  324 GPGDTSNFDDYEEEDT  339 (355)
T ss_pred             CCcccccccccccccc
Confidence            8999999999877664

>KOG0695|consensus

Probab=99.83  E-value=8.6e-21  Score=143.95  Aligned_cols=108  Identities=31%  Similarity=0.619  Sum_probs=100.2

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +|+-|+ .  .++.+|..+|-.|..+++.+|.+||++|+|+. .-|+.+|+.|+||+.|||+.++++.+.|||.|.+.+.
T Consensus       467 lfqvil-e--kqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d  543 (593)
T KOG0695|consen  467 LFQVIL-E--KQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDD  543 (593)
T ss_pred             HHHHHh-h--hcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccccc
Confidence            688899 3  48999999999999999999999999999997 4599999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~~~  113 (126)
                      .+..|||. ||+|.+-++|.        |+++|+||.|.|.
T Consensus       544 ~~l~~fd~qft~e~~qltpdd~d~i~ridqsefegfeyinp  584 (593)
T KOG0695|consen  544 YGLDNFDTQFTSEPVQLTPDDEDAIKRIDQSEFEGFEYINP  584 (593)
T ss_pred             cCccccccccccCCcccCCCCHHHHHhcchhhcCcceecch
Confidence            99999996 99999888875        5889999999986

>KOG0598|consensus

Probab=99.80  E-value=1.7e-19  Score=136.63  Aligned_cols=107  Identities=34%  Similarity=0.628  Sum_probs=89.2

Q ss_pred             hHHHHHHhcCCCc-ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           2 QTYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         2 ~l~~~I~~~~~~~-~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      +++++|+ ++  + ...|..+|.++++||++||++||.+|+| ..+|+.+|+.||||.+++|+.+.++++.|||.|.+.+
T Consensus       232 ~~~~~I~-~~--k~~~~p~~ls~~ardll~~LL~rdp~~RLg-~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~  307 (357)
T KOG0598|consen  232 KMYDKIL-KG--KLPLPPGYLSEEARDLLKKLLKRDPRQRLG-GPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTG  307 (357)
T ss_pred             HHHHHHh-cC--cCCCCCccCCHHHHHHHHHHhccCHHHhcC-CCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCC
Confidence            5789999 65  6 4556669999999999999999999999 4678999999999999999999999999999999999


Q ss_pred             CCCCCCCCC-CCCCCCCCCCCC---------------CCCCCCCccCC
Q psy3183          81 PTDTSNFDR-YSAENDIKGPTD---------------TSNFDRYSAEN  112 (126)
Q Consensus        81 ~~d~~~fd~-~~~e~~~~~~~~---------------~~~f~~f~~~~  112 (126)
                      ..++++||. |+......++..               ...|.||||..
T Consensus       308 ~~~~~~Fd~eft~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~gft~~~  355 (357)
T KOG0598|consen  308 LEDTSNFDNEFTSYTVDYSPVDSSPDMSAFTAFSRTYNKIFPGFTYVA  355 (357)
T ss_pred             ccccccccHHHHhccccCCccccCcccccccccccccccccCCccccC
Confidence            999999997 666543333222               33577777764

>KOG0612|consensus

Probab=99.75  E-value=1.8e-18  Score=145.25  Aligned_cols=105  Identities=34%  Similarity=0.627  Sum_probs=86.2

Q ss_pred             hHHHHHHhcCCCcccCC--CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           2 QTYNMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p--~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      ++|.+|+ +.+..+.||  ..+|.+|++||++||+ +|..|+|-  +|+++|+.||||.|++|+.+....  ||++|.++
T Consensus       288 eTY~KIm-~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgr--ngiedik~HpFF~g~~W~~iR~~~--pP~vPevs  361 (1317)
T KOG0612|consen  288 ETYGKIM-NHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGR--NGIEDIKNHPFFEGIDWDNIRESV--PPVVPEVS  361 (1317)
T ss_pred             HHHHHHh-chhhhcCCCcccccCHHHHHHHHHHhc-Chhhhccc--ccHHHHHhCccccCCChhhhhhcC--CCCCCcCC
Confidence            6899999 434578999  5799999999999998 79999986  999999999999999999887766  99999999


Q ss_pred             CCCCCCCCCCCCC----CCCCC--C----CCCCCCCCCCccCC
Q psy3183          80 GPTDTSNFDRYSA----ENDIK--G----PTDTSNFDRYSAEN  112 (126)
Q Consensus        80 ~~~d~~~fd~~~~----e~~~~--~----~~~~~~f~~f~~~~  112 (126)
                      ++.|++|||.-.+    .....  .    .+....|.||||..
T Consensus       362 sd~DTsnFd~~~dd~~~~e~~p~~~~~~f~Gn~LPFIGfTy~~  404 (1317)
T KOG0612|consen  362 SDDDTSNFDVDEDDLRDAETFPPRIPKAFSGNHLPFIGFTYTH  404 (1317)
T ss_pred             CCCccccccccccccchhhccCCCCCCCCcCCcCCeeeeeecc
Confidence            9999999964222    11111  1    24567999999984

>KOG0986|consensus

Probab=99.74  E-value=1.5e-18  Score=135.19  Aligned_cols=116  Identities=22%  Similarity=0.420  Sum_probs=95.3

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++-++|+   .+...||..+|++|++|++.||++||++|||+...|++++++||||+++||..|+...+.|||+|.....
T Consensus       397 Evdrr~~---~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aV  473 (591)
T KOG0986|consen  397 EVDRRTL---EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAV  473 (591)
T ss_pred             HHHHHHh---cchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCcccc
Confidence            4556677   3478999999999999999999999999999988899999999999999999999999999999987643


Q ss_pred             C--CCCCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCCCCCC
Q psy3183          82 T--DTSNFDRYSAEN-DIKGPTDTSNFDRYSAENDVPPDETS  120 (126)
Q Consensus        82 ~--d~~~fd~~~~e~-~~~~~~~~~~f~~f~~~~~~~~~~~~  120 (126)
                      .  |...++.|++-. ..+...|++.|.+|.....+.+|++.
T Consensus       474 yakDv~DIeqFs~VKGV~ld~~D~~fy~~F~tg~vsipWQnE  515 (591)
T KOG0986|consen  474 YAKDVLDIEQFSTVKGVKLDDTDTDFYKNFATGSVSIPWQNE  515 (591)
T ss_pred             chhhhhhhhhcccccceecccccHHHHHhccCCcccchHHHH
Confidence            3  333344455422 33557889999999998888777654

>KOG0610|consensus

Probab=99.62  E-value=4.6e-16  Score=119.91  Aligned_cols=74  Identities=34%  Similarity=0.672  Sum_probs=63.2

Q ss_pred             hHHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           2 QTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      +++.+|+ .  ..+.||.  .+|..|+|||++||.+||++|+|+ ..|+.+|+.||||++|+|..+.  ...||++|...
T Consensus       342 ~Tl~NIv-~--~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~-~rGA~eIK~HpFF~gVnWaLir--~~~PP~iP~~~  415 (459)
T KOG0610|consen  342 ETLRNIV-G--QPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGS-KRGAAEIKRHPFFEGVNWALIR--CARPPEIPKPV  415 (459)
T ss_pred             hhHHHHh-c--CCCcCCCCCcchhHHHHHHHHHhccChhhhhcc-ccchHHhhcCccccCCChhhee--ccCCCcCCCcc
Confidence            5789999 4  4899994  689999999999999999999997 5789999999999999999444  44599999865


Q ss_pred             CC
Q psy3183          80 GP   81 (126)
Q Consensus        80 ~~   81 (126)
                      ..
T Consensus       416 d~  417 (459)
T KOG0610|consen  416 DG  417 (459)
T ss_pred             cc
Confidence            43

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.56  E-value=2.3e-14  Score=107.92  Aligned_cols=107  Identities=29%  Similarity=0.622  Sum_probs=89.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      ++++.|. .+  .+.+|..++.++++||++||++||.+|+++. -.|..+++.||||.+++|..+..+.+.||+.|.+.+
T Consensus       203 ~~~~~i~-~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~  279 (320)
T cd05590         203 DLFEAIL-ND--EVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKS  279 (320)
T ss_pred             HHHHHHh-cC--CCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCC
Confidence            3566777 44  6788889999999999999999999999874 246689999999999999999999999999999999


Q ss_pred             CCCCCCCCC-CCCCCCCCCC--------CCCCCCCCCccC
Q psy3183          81 PTDTSNFDR-YSAENDIKGP--------TDTSNFDRYSAE  111 (126)
Q Consensus        81 ~~d~~~fd~-~~~e~~~~~~--------~~~~~f~~f~~~  111 (126)
                      ..+.++|+. +..+.+..++        ..+..|++|+|.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (320)
T cd05590         280 REDVSNFDPDFIKEDPVLTPIEESLLPMINQDEFRNFSYT  319 (320)
T ss_pred             cchhhhcCcccccCCccCCCCcccccccccccCcCCCccc
Confidence            999999986 6665544443        346688888874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.53  E-value=5.4e-14  Score=105.81  Aligned_cols=107  Identities=31%  Similarity=0.631  Sum_probs=87.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++++.|+ ..  .+.+|..++.++++||.+||+++|.+|+++...+..+|+.|+||+.++|..+..+.+.||+.|.... 
T Consensus       208 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-  283 (323)
T cd05616         208 ELFQSIM-EH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKACG-  283 (323)
T ss_pred             HHHHHHH-hC--CCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCC-
Confidence            3566777 44  6788999999999999999999999999976567799999999999999999999999999998754 


Q ss_pred             CCCCCCCCCCCC-CCCCCCC--------CCCCCCCCccCC
Q psy3183          82 TDTSNFDRYSAE-NDIKGPT--------DTSNFDRYSAEN  112 (126)
Q Consensus        82 ~d~~~fd~~~~e-~~~~~~~--------~~~~f~~f~~~~  112 (126)
                      .+..+++.|... .++.++.        ++.+|.||+|++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (323)
T cd05616         284 RDAENFDKFFTRHPPVLTPPDQEVIMNLDQSEFEGFSYVN  323 (323)
T ss_pred             chhhhcCchhccCCccCCCCCccccccccccccCCCcccC
Confidence            777888875443 2333333        367999999874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.53  E-value=6.4e-14  Score=105.32  Aligned_cols=106  Identities=33%  Similarity=0.681  Sum_probs=89.3

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      ++..|. ..  .+.+|..++.++++||++||..||.+|++.......+++.||||+.++|..+..+.+.||+.|.+....
T Consensus       204 ~~~~i~-~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (318)
T cd05570         204 LFQSIL-ED--EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRF  280 (318)
T ss_pred             HHHHHH-cC--CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCCCCCcc
Confidence            455666 43  677888999999999999999999999997656679999999999999999999999999999999989


Q ss_pred             CCCCCCC-CCCCCCCCCC--------CCCCCCCCCccC
Q psy3183          83 DTSNFDR-YSAENDIKGP--------TDTSNFDRYSAE  111 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~~--------~~~~~f~~f~~~  111 (126)
                      +..+|+. |..+.+..++        .+++.|+||+|.
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (318)
T cd05570         281 DVSNFDDEFTKEKPVLTPPDEAIIRNIDQEEFRGFSYI  318 (318)
T ss_pred             hhhhcCchhccCcccCCCCcccccccccccccCCCCCC
Confidence            9999986 6655554443        457899999983

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.50  E-value=1.7e-13  Score=103.22  Aligned_cols=108  Identities=32%  Similarity=0.665  Sum_probs=87.2

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++++.|. ..  .+.+|..++.++++||++||..+|.+|++....+..+++.||||+.++|..+..+.+.+|+.|.+...
T Consensus       208 ~~~~~i~-~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (324)
T cd05587         208 ELFQSIM-EH--NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGR  284 (324)
T ss_pred             HHHHHHH-cC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCcCCCc
Confidence            3566677 44  67888899999999999999999999998755567899999999999999999999999999999888


Q ss_pred             CCCCCCCCCCC-CCCCCCC--------CCCCCCCCCccCC
Q psy3183          82 TDTSNFDRYSA-ENDIKGP--------TDTSNFDRYSAEN  112 (126)
Q Consensus        82 ~d~~~fd~~~~-e~~~~~~--------~~~~~f~~f~~~~  112 (126)
                      .+..+|+.+.. .....++        .++..|.+|+|+|
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (324)
T cd05587         285 RSAENFDKFFTREPPVLTPPDKLVIANIDQSEFQGFSFVN  324 (324)
T ss_pred             chhhhcCcccccCccccCCCCccccccccccccCCCcccC
Confidence            88999987433 2233333        2356888888764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.48  E-value=2.7e-13  Score=101.98  Aligned_cols=108  Identities=31%  Similarity=0.614  Sum_probs=87.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCC--CChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQR--GGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~--~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      ++++.|. .+  .+.+|..++.++++||.+||..+|.+|+++..  ..+.+++.||||.+++|..+..+.+.+|+.|...
T Consensus       203 ~~~~~i~-~~--~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~  279 (321)
T cd05591         203 DLFESIL-HD--DVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIK  279 (321)
T ss_pred             HHHHHHH-cC--CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCCCC
Confidence            3566777 44  67788899999999999999999999997632  2568999999999999999999999999999988


Q ss_pred             CCCCCCCCCC-CCCCCCCCCC--------CCCCCCCCCccCC
Q psy3183          80 GPTDTSNFDR-YSAENDIKGP--------TDTSNFDRYSAEN  112 (126)
Q Consensus        80 ~~~d~~~fd~-~~~e~~~~~~--------~~~~~f~~f~~~~  112 (126)
                      ...+..+|+. ++.+.....+        ..+..|.||++.+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (321)
T cd05591         280 TKRDVNNFDQDFTKEEPVLTPVDPAVIKQINQEEFRGFSFFN  321 (321)
T ss_pred             CcchhhhcCCccccCccccCCCCccccccccccccCCCcccC
Confidence            8788888875 6555544443        2466788888753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.48  E-value=3.2e-13  Score=101.93  Aligned_cols=107  Identities=32%  Similarity=0.603  Sum_probs=85.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++.++ ..  .+.+|..++..++++|++||..||.+|+++. ..++.+|+.||||.+++|+.+..+.+.||+.|.....
T Consensus       211 ~~~~~~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~  287 (327)
T cd05617         211 LFQVIL-EK--PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDD  287 (327)
T ss_pred             HHHHHH-hC--CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCCC
Confidence            345555 33  6778889999999999999999999999863 3467899999999999999999999999999999888


Q ss_pred             CCCCCCCC-CCCCCCCCC--------CCCCCCCCCCccCC
Q psy3183          82 TDTSNFDR-YSAENDIKG--------PTDTSNFDRYSAEN  112 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~--------~~~~~~f~~f~~~~  112 (126)
                      .+..+|+. +..+....+        ..++..|.||.|.|
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (327)
T cd05617         288 YGLENFDTQFTSEPVQLTPDDEDVIKRIDQSEFEGFEYIN  327 (327)
T ss_pred             cchhhcCCccccCcccCCCCCccccccccccccCCCcCCC
Confidence            88889975 544433333        23566777777753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.47  E-value=3.3e-13  Score=101.98  Aligned_cols=107  Identities=33%  Similarity=0.632  Sum_probs=86.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++.|+ ..  .+.+|..++.++++||++||..||.+|+++. ..++.+++.||||.+++|..+..+.+.||+.|.+...
T Consensus       213 ~~~~~~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (329)
T cd05588         213 LFQVIL-EK--QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIESD  289 (329)
T ss_pred             HHHHHH-cC--CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCccccCCCc
Confidence            345566 43  6788999999999999999999999999863 2357999999999999999999888889999999888


Q ss_pred             CCCCCCCC-CCCCCCCCCC--------CCCCCCCCCccCC
Q psy3183          82 TDTSNFDR-YSAENDIKGP--------TDTSNFDRYSAEN  112 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~--------~~~~~f~~f~~~~  112 (126)
                      .+..+|+. +..+....+|        .++..|.||.|-|
T Consensus       290 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  329 (329)
T cd05588         290 RDLDNFDPQFTDEPVQLTPDDPDVIARIDQSEFEGFEYIN  329 (329)
T ss_pred             chhhhcCCccccCccccCCCCccccccccccccCCCcccC
Confidence            88888886 6555444433        3467888887743

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.46  E-value=4.3e-13  Score=101.04  Aligned_cols=107  Identities=28%  Similarity=0.613  Sum_probs=85.3

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      ++..|. .+  .+.+|..++.++++||++||..||.+|++.....+.+|+.||||.+++|..+..+.+.||+.|.+.+..
T Consensus       203 ~~~~~~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~  279 (323)
T cd05571         203 LFELIL-ME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSET  279 (323)
T ss_pred             HHHHHH-cC--CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcc
Confidence            455666 44  778899999999999999999999999975444569999999999999999999999999999999888


Q ss_pred             CCCCCCC-CCCCCCCCCCC------------CCCCCCCCccCC
Q psy3183          83 DTSNFDR-YSAENDIKGPT------------DTSNFDRYSAEN  112 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~~~------------~~~~f~~f~~~~  112 (126)
                      ++.+|+. ++.......|.            ....|.+|+|..
T Consensus       280 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  322 (323)
T cd05571         280 DTRYFDEEFTAQSITITPPDRYDSLGLLQLEERPHFPQFSYSA  322 (323)
T ss_pred             hhhhcCcccccCCcccCCCCcccccccccccccccCCCCeeeC
Confidence            9999875 55543322221            234688888853

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.44  E-value=7.9e-13  Score=99.99  Aligned_cols=106  Identities=30%  Similarity=0.626  Sum_probs=83.2

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++.|+ ..  .+.+|..++..+++||++||..||.+|+++. ..|+.+|+.||||++++|..+..+++.||+.|.....
T Consensus       213 ~~~~i~-~~--~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~  289 (329)
T cd05618         213 LFQVIL-EK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNISGE  289 (329)
T ss_pred             HHHHHh-cC--CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccCCCCCc
Confidence            345566 33  6788999999999999999999999999863 2467899999999999999999999999999998887


Q ss_pred             CCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAE  111 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~  111 (126)
                      .+..+|+. ++.+....++.        .+..|.||.|.
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (329)
T cd05618         290 FGLDNFDAQFTNEPVQLTPDDDDIVRKIDQSEFEGFEYI  328 (329)
T ss_pred             ccchhcCcccccCCccCCCCcccccccccccccCCCccc
Confidence            77788875 55544333332        34566776654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.44  E-value=6.8e-13  Score=101.07  Aligned_cols=89  Identities=31%  Similarity=0.594  Sum_probs=77.7

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      +++.|+ .+  .+.+|..++..+++||++||..+|.+|++....++++|+.||||.+++|..+..+.+.+|+.|......
T Consensus       236 ~~~~i~-~~--~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~~~  312 (340)
T PTZ00426        236 IYQKIL-EG--IIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNVF  312 (340)
T ss_pred             HHHHHh-cC--CCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCCc
Confidence            567777 55  678899999999999999999999999976556789999999999999999999999999999998888


Q ss_pred             CCCCCCCCCCCC
Q psy3183          83 DTSNFDRYSAEN   94 (126)
Q Consensus        83 d~~~fd~~~~e~   94 (126)
                      +.++|+++..+.
T Consensus       313 ~~~~~~~~~~~~  324 (340)
T PTZ00426        313 DSSNFERVQEDL  324 (340)
T ss_pred             chhhcCCCcccc
Confidence            888988755443

>KOG0608|consensus

Probab=99.43  E-value=1.1e-13  Score=111.95  Aligned_cols=77  Identities=42%  Similarity=0.701  Sum_probs=66.6

Q ss_pred             cccCC--CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCCCCCCCCCC
Q psy3183          14 KIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYS   91 (126)
Q Consensus        14 ~~~~p--~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d~~~fd~~~   91 (126)
                      .+.||  ..+|.+|.+||.+|++ ++..|||-  +|+++|+.||||++|||..|.+++  +|++|.+.-+.|++|||.+.
T Consensus       889 ~l~~~~~~~ls~e~~~li~kLc~-sad~RLGk--ng~d~vKaHpfFkgIDfsslRkq~--ApYIP~ItHptDTSNFdpvd  963 (1034)
T KOG0608|consen  889 FLHIPYQGNLSKEALDLIQKLCC-SADSRLGK--NGADQVKAHPFFKGIDFSSLRKQR--APYIPRITHPTDTSNFDPVD  963 (1034)
T ss_pred             ccccccccccCHHHHHHHHHHhc-Chhhhhcc--cchhhhhcCccccccchHhhhhcc--CCcCccccCCCccccCCcCC
Confidence            34455  5799999999999987 79999986  899999999999999999976666  88999999999999999876


Q ss_pred             CCCC
Q psy3183          92 AEND   95 (126)
Q Consensus        92 ~e~~   95 (126)
                      .|..
T Consensus       964 pekl  967 (1034)
T KOG0608|consen  964 PEKL  967 (1034)
T ss_pred             cccc
Confidence            6543

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.43  E-value=7e-13  Score=100.17  Aligned_cols=104  Identities=32%  Similarity=0.662  Sum_probs=84.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|. .+  .+.+|..++..+++||.+||..||.+|++.....+.+|+.||||.+++|..+..+.+.+|+.+.+...
T Consensus       222 ~~~~~i~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~~~~~~~~~~~~~~~  298 (329)
T PTZ00263        222 RIYEKIL-AG--RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRVKSP  298 (329)
T ss_pred             HHHHHHh-cC--CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCc
Confidence            3567777 55  78889999999999999999999999998766778999999999999999999999988988888888


Q ss_pred             CCCCCCCCCCCCC----CCCCCCCCCCCCCC
Q psy3183          82 TDTSNFDRYSAEN----DIKGPTDTSNFDRY  108 (126)
Q Consensus        82 ~d~~~fd~~~~e~----~~~~~~~~~~f~~f  108 (126)
                      .+..+|+.+....    ..+++..+..|.||
T Consensus       299 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  329 (329)
T PTZ00263        299 GDTSNFEKYPDSPVDRLPPLTAAQQAEFAGF  329 (329)
T ss_pred             ccchhccCCcccccccCCCCchhhhhhcCCC
Confidence            8888998754321    12223445566665

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.42  E-value=7.9e-13  Score=99.49  Aligned_cols=103  Identities=30%  Similarity=0.612  Sum_probs=85.1

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      +++.|. ..  ...+|..++.++++||.+||.++|.+|+++.    .+++.||||..++|..+..+.+.||+.|.+....
T Consensus       204 ~~~~i~-~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~----~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (316)
T cd05619         204 LFQSIR-MD--NPCYPRWLTREAKDILVKLFVREPERRLGVK----GDIRQHPFFREIDWSALEEREIEPPFKPKVKSAN  276 (316)
T ss_pred             HHHHHH-hC--CCCCCccCCHHHHHHHHHHhccCHhhcCCCh----HHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCcc
Confidence            445555 33  5678888999999999999999999999881    4899999999999999999999999999999999


Q ss_pred             CCCCCCC-CCCCCCCCC--------CCCCCCCCCCccCC
Q psy3183          83 DTSNFDR-YSAENDIKG--------PTDTSNFDRYSAEN  112 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~--------~~~~~~f~~f~~~~  112 (126)
                      +.++|+. +.++....+        ..+++-|++|++.+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (316)
T cd05619         277 DCSNFDKEFLNEKPRLSVTDRMLINSMDQNMFENFSFIN  315 (316)
T ss_pred             chhhcChhhhcCCcccCCCcccccccccccccCCCcccC
Confidence            9999987 666655544        24566799998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0603|consensus

Probab=99.42  E-value=2.1e-13  Score=109.50  Aligned_cols=109  Identities=28%  Similarity=0.557  Sum_probs=96.7

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++.++|+ +.  .+.+|..++..+++++..++.++|..|+|....|+.+|++|+||..++|+.+..+++.|||.|.+..+
T Consensus       194 ~~~~~Il-~~--~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e  270 (612)
T KOG0603|consen  194 DTMKRIL-KA--ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITE  270 (612)
T ss_pred             HHHHHHh-hh--ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccch
Confidence            4677888 54  89999999999999999999999999999877799999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCC------CCCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGP------TDTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~------~~~~~f~~f~~~~~  113 (126)
                      .|+.+||. |+...+..+|      .+...|.||+|...
T Consensus       271 ~~~~~fd~eft~~~P~dsp~~~~~~s~~~if~g~sfva~  309 (612)
T KOG0603|consen  271 RDVAQFDPEFTSQVPADSPLLSASGSDHTIFSGPSFVAP  309 (612)
T ss_pred             hhhhhcCchhccCCcccCCCCCCCccccchhcCCCccCh
Confidence            99999998 8877666542      34568999999764

>KOG0592|consensus

Probab=99.42  E-value=2e-13  Score=108.34  Aligned_cols=60  Identities=35%  Similarity=0.607  Sum_probs=56.4

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT   69 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~   69 (126)
                      -+|++|+ ..  .+.||+.+++.++|||++||.+||..|+|+     ++|++||||.+|+|+.|.++.
T Consensus       294 liFqkI~-~l--~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~-----~qIk~HpFF~~Vdw~nlw~~~  353 (604)
T KOG0592|consen  294 LIFQKIQ-AL--DYEFPEGFPEDARDLIKKLLVRDPSDRLTS-----QQIKAHPFFEGVDWENLWQQT  353 (604)
T ss_pred             HHHHHHH-Hh--cccCCCCCCHHHHHHHHHHHccCccccccH-----HHHhhCcccccCChhhhhhcC
Confidence            4799999 54  899999999999999999999999999999     999999999999999988776

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.41  E-value=1.4e-12  Score=98.24  Aligned_cols=106  Identities=29%  Similarity=0.673  Sum_probs=87.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      ++..|. .+  .+.+|..++.++.+||.+||..||.+|++.....+.+++.||||++++|..+..+.+.||+.|.+....
T Consensus       209 ~~~~i~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  285 (324)
T cd05589         209 VFDSIV-ND--EVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTIKGPE  285 (324)
T ss_pred             HHHHHH-hC--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCCCCcc
Confidence            455666 44  677888999999999999999999999986555679999999999999999999999999999998888


Q ss_pred             CCCCCCC-CCCCCCC---------CCCCCCCCCCCCccC
Q psy3183          83 DTSNFDR-YSAENDI---------KGPTDTSNFDRYSAE  111 (126)
Q Consensus        83 d~~~fd~-~~~e~~~---------~~~~~~~~f~~f~~~  111 (126)
                      |.++|+. +....+.         .++..+..|.+|.|.
T Consensus       286 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (324)
T cd05589         286 DVSNFDEEFTSEAPVLTPPREPRLLTEEEQELFRGFDYV  324 (324)
T ss_pred             hhhhcCccccccccccCCCccccccchhhhcccCCcccC
Confidence            9999885 5444332         234557789999874

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.41  E-value=1.7e-12  Score=97.85  Aligned_cols=106  Identities=30%  Similarity=0.639  Sum_probs=83.4

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      +++.|+ ..  .+.+|..++.++++||.+||.++|.+|++....+..+|+.||||+.++|..+..+.+.+|+.|.... .
T Consensus       209 ~~~~i~-~~--~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~-~  284 (323)
T cd05615         209 LFQSIM-EH--NVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPKVCG-K  284 (323)
T ss_pred             HHHHHH-hC--CCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCccCC-C
Confidence            566777 44  6788999999999999999999999999975556789999999999999999999999999998655 4


Q ss_pred             CCCCCCCCC-CCCCCCC--------CCCCCCCCCCccCC
Q psy3183          83 DTSNFDRYS-AENDIKG--------PTDTSNFDRYSAEN  112 (126)
Q Consensus        83 d~~~fd~~~-~e~~~~~--------~~~~~~f~~f~~~~  112 (126)
                      ...+|+.+. .......        +.+...|.+|+|.+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (323)
T cd05615         285 GAENFDKFFTRGQPVLTPPDQLVIANIDQADFEGFSYVN  323 (323)
T ss_pred             chhhcCccccccCCCCCCCcccccccccccccCCCcccC
Confidence            578888743 3222222        22345788888764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.39  E-value=1.8e-12  Score=97.51  Aligned_cols=103  Identities=31%  Similarity=0.638  Sum_probs=84.3

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      +++.|. ..  .+.+|..++.++++||.+||..||.+|+++    ..+++.||||.+++|..+..+.+.+|+.|......
T Consensus       204 ~~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~~~----~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~  276 (316)
T cd05620         204 LFESIR-VD--TPHYPRWITKESKDILEKLFERDPTRRLGV----VGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPS  276 (316)
T ss_pred             HHHHHH-hC--CCCCCCCCCHHHHHHHHHHccCCHHHcCCC----hHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcc
Confidence            455565 33  677888999999999999999999999987    25899999999999999999999999999999888


Q ss_pred             CCCCCCC-CCCCCCCCCC--------CCCCCCCCCccCC
Q psy3183          83 DTSNFDR-YSAENDIKGP--------TDTSNFDRYSAEN  112 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~~--------~~~~~f~~f~~~~  112 (126)
                      +.++|+. +..+....+.        .++..|.||+|.+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (316)
T cd05620         277 DYSNFDREFLSEKPRLSYSDKNLIDSMDQSAFAGFSFIN  315 (316)
T ss_pred             hhhhcCccccccCcccCCCcccccccccccCcCCCcccC
Confidence            9999986 5555544442        3466888888864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.39  E-value=2.1e-12  Score=97.04  Aligned_cols=103  Identities=33%  Similarity=0.717  Sum_probs=86.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      ++..|. ..  ...+|..++.++++||.+||..+|.+|+++    ..+++.|+||..++|..+..+.+.||+.|......
T Consensus       204 ~~~~i~-~~--~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~----~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (316)
T cd05592         204 LFDSIL-ND--RPHFPRWISKEAKDCLSKLFERDPTKRLGV----DGDIRQHPFFRGIDWERLEKREIPPPFKPKVKSPS  276 (316)
T ss_pred             HHHHHH-cC--CCCCCCCCCHHHHHHHHHHccCCHHHcCCC----hHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCcc
Confidence            455566 33  567888899999999999999999999986    25899999999999999999999999999999989


Q ss_pred             CCCCCCC-CCCCCCCCCC--------CCCCCCCCCccCC
Q psy3183          83 DTSNFDR-YSAENDIKGP--------TDTSNFDRYSAEN  112 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~~--------~~~~~f~~f~~~~  112 (126)
                      +..+|++ ++.+....++        .++..|.+|.|.+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (316)
T cd05592         277 DASNFDREFTNEKVRLSPVDKKLLASMDQEQFRGFSFTN  315 (316)
T ss_pred             hhhhcCcccccccccCCCccccccccccccccCCCcccC
Confidence            9999987 6666555554        3477899998875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=3e-12  Score=95.90  Aligned_cols=87  Identities=34%  Similarity=0.714  Sum_probs=75.9

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++++.|+ .+  .+.+|..++.++++||.+||..||.+|++.  .++.+++.||||..++|..+..+.+.+++.|.+...
T Consensus       200 ~~~~~~~-~~--~~~~~~~~~~~~~~li~~~L~~dp~~R~~~--~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (312)
T cd05585         200 EMYRKIL-QE--PLRFPDGFDRDAKDLLIGLLSRDPTRRLGY--NGAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSA  274 (312)
T ss_pred             HHHHHHH-cC--CCCCCCcCCHHHHHHHHHHcCCCHHHcCCC--CCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCc
Confidence            3567777 44  788899999999999999999999999986  567999999999999999999999999999999888


Q ss_pred             CCCCCCCC-CCCC
Q psy3183          82 TDTSNFDR-YSAE   93 (126)
Q Consensus        82 ~d~~~fd~-~~~e   93 (126)
                      .+.++|+. ++..
T Consensus       275 ~~~~~~~~~~~~~  287 (312)
T cd05585         275 IDTSNFDEEFTRE  287 (312)
T ss_pred             cchhhcCcccccc
Confidence            89999986 5543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=1.8e-12  Score=96.19  Aligned_cols=86  Identities=42%  Similarity=0.831  Sum_probs=76.7

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++++.|. .+  .+.+|..++..+++||++||..||.+|++.....+.+++.|+||..++|..+..++..||..|.+...
T Consensus       205 ~~~~~i~-~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~  281 (291)
T cd05612         205 GIYEKIL-AG--KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHD  281 (291)
T ss_pred             HHHHHHH-hC--CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCc
Confidence            3566777 54  77889999999999999999999999998655677999999999999999999999999999999999


Q ss_pred             CCCCCCCCC
Q psy3183          82 TDTSNFDRY   90 (126)
Q Consensus        82 ~d~~~fd~~   90 (126)
                      .++.||+.+
T Consensus       282 ~~~~~~~~~  290 (291)
T cd05612         282 GDTSNFDDY  290 (291)
T ss_pred             cccccccCC
Confidence            999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.37  E-value=4.8e-12  Score=95.69  Aligned_cols=107  Identities=28%  Similarity=0.609  Sum_probs=84.8

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      +++.|. ..  .+.+|..++.++++||++||.+||.+|++.....+.+|+.|+||.+++|..+..+.+.||+.|...+..
T Consensus       203 ~~~~~~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (328)
T cd05593         203 LFELIL-ME--DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSET  279 (328)
T ss_pred             HHHHhc-cC--CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcc
Confidence            445555 33  678899999999999999999999999976555679999999999999999999999999999998888


Q ss_pred             CCCCCCC-CCCCCCCCCCC--------------CCCCCCCCccCC
Q psy3183          83 DTSNFDR-YSAENDIKGPT--------------DTSNFDRYSAEN  112 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~~~--------------~~~~f~~f~~~~  112 (126)
                      +..+|+. ++.+.....+.              ....|.+|+|..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (328)
T cd05593         280 DTRYFDEEFTAQTITITPPEKYDEDGMDCMDNERRPHFPQFSYSA  324 (328)
T ss_pred             hhhhcCcccccCCcccCCccccccccccccccccccccCCceeeC
Confidence            8888885 55543332221              134677777754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.31  E-value=1.5e-11  Score=92.55  Aligned_cols=88  Identities=28%  Similarity=0.636  Sum_probs=74.9

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++++ ..  .+.+++.++..+.++|++||.++|.+|++. ...+.+|+.||||.+++|..+..+++.+|+.|.....
T Consensus       203 ~~~~~~~-~~--~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~-~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~  278 (325)
T cd05604         203 EMYDNIL-HK--PLVLRPGASLTAWSILEELLEKDRQRRLGA-KEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGP  278 (325)
T ss_pred             HHHHHHH-cC--CccCCCCCCHHHHHHHHHHhccCHHhcCCC-CCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCc
Confidence            3567777 43  667777899999999999999999999986 3467899999999999999999999999999999888


Q ss_pred             CCCCCCCC-CCCC
Q psy3183          82 TDTSNFDR-YSAE   93 (126)
Q Consensus        82 ~d~~~fd~-~~~e   93 (126)
                      .+.++|+. ++.+
T Consensus       279 ~~~~~~~~~~~~~  291 (325)
T cd05604         279 DDISNFDAVFTEE  291 (325)
T ss_pred             chhhhcCCccccC
Confidence            88999986 4443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.31  E-value=1.4e-11  Score=92.72  Aligned_cols=84  Identities=30%  Similarity=0.673  Sum_probs=73.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|+ .+  .+.++..++.++++||.+||+++|.+|++. ...+.+++.||||.+++|..+..+.+.+|+.|.+...
T Consensus       203 ~~~~~i~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (323)
T cd05575         203 EMYDNIL-NK--PLRLKPNISVSARHLLEGLLQKDRTKRLGA-KDDFLEIKNHVFFSSINWDDLVNKKITPPFNPNVSGP  278 (323)
T ss_pred             HHHHHHH-cC--CCCCCCCCCHHHHHHHHHHhhcCHHhCCCC-CCCHHHHHcCCCcCCCCHHHHhhccCCCCcCCCCCCc
Confidence            3566777 44  677788899999999999999999999987 3566899999999999999999999999999998888


Q ss_pred             CCCCCCCC
Q psy3183          82 TDTSNFDR   89 (126)
Q Consensus        82 ~d~~~fd~   89 (126)
                      .+...|+.
T Consensus       279 ~~~~~~~~  286 (323)
T cd05575         279 MDLKHFDP  286 (323)
T ss_pred             chhhhcCc
Confidence            88888876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.31  E-value=1.2e-11  Score=93.19  Aligned_cols=107  Identities=25%  Similarity=0.563  Sum_probs=85.7

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      ++..|. ..  .+.+|..+++++++||.+||..||.+|++.....+.+++.|+||.+++|..+..+.+.||+.|...+..
T Consensus       203 ~~~~~~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (323)
T cd05595         203 LFELIL-ME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEV  279 (323)
T ss_pred             HHHHHh-cC--CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCChh
Confidence            445566 33  678889999999999999999999999976555679999999999999999999999999999999888


Q ss_pred             CCCCCCC-CCCCCCCCC------------CCCCCCCCCCccCC
Q psy3183          83 DTSNFDR-YSAENDIKG------------PTDTSNFDRYSAEN  112 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~------------~~~~~~f~~f~~~~  112 (126)
                      +...|+. ++.......            ......|..|||..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (323)
T cd05595         280 DTRYFDDEFTAQSITITPPDRYDSLGLLELDQRTHFPQFSYSA  322 (323)
T ss_pred             hhhhcCcccccCCccCCCCcccccccccccccccccCCCcccC
Confidence            8888886 554433222            22355888888863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.27  E-value=3.1e-11  Score=90.94  Aligned_cols=107  Identities=27%  Similarity=0.584  Sum_probs=84.8

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      .+..|+ .+  ...+|..++.++++||.+||.++|.+|++.....+.+++.||||..++|..+..+.+.||+.+......
T Consensus       208 ~~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (323)
T cd05584         208 TIDKIL-KG--KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEE  284 (323)
T ss_pred             HHHHHH-cC--CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhcCCCCCCcCCCCCCcc
Confidence            355666 44  677888999999999999999999999976555679999999999999999999999999999888777


Q ss_pred             CCCCCCC-CCCCCCCCC-------CCCCCCCCCCccCC
Q psy3183          83 DTSNFDR-YSAENDIKG-------PTDTSNFDRYSAEN  112 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~-------~~~~~~f~~f~~~~  112 (126)
                      +.+.|+. ++...+..+       ......|.||+|..
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (323)
T cd05584         285 DVSQFDSKFTRQTPVDSPDDSTLSESANQIFLGFTYVA  322 (323)
T ss_pred             hhhhcCchhcccccccCccccccccccccCcCCCeecC
Confidence            8777774 444333322       23356899998853

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.24  E-value=5.6e-11  Score=89.57  Aligned_cols=105  Identities=30%  Similarity=0.611  Sum_probs=82.9

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTD   83 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d   83 (126)
                      .+.++ ..  ...+|..++..+++||.+||..||.+|++.....+.+++.||||.+++|..+..+.+.+|+.|......+
T Consensus       220 ~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (332)
T cd05614         220 SRRIL-KC--DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPSIRNELD  296 (332)
T ss_pred             HHHHh-cC--CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcch
Confidence            34455 33  5677888999999999999999999999774446799999999999999999999999999999888777


Q ss_pred             CCCCCC-CCCCCCCC-----CCCCCCCCCCCccC
Q psy3183          84 TSNFDR-YSAENDIK-----GPTDTSNFDRYSAE  111 (126)
Q Consensus        84 ~~~fd~-~~~e~~~~-----~~~~~~~f~~f~~~  111 (126)
                      ..+|.. +....+..     .+.....|.||+|.
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (332)
T cd05614         297 VGNFAEEFTNLEPVYSPAGTPPSGARVFQGYSFV  330 (332)
T ss_pred             hhhcCcccccCCcccCCCCCCcccccccCCceec
Confidence            777754 33322222     24556789999886

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.23  E-value=6.2e-11  Score=88.91  Aligned_cols=106  Identities=33%  Similarity=0.628  Sum_probs=80.3

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      ++..|. +.  .+.+|..++.++++||.+||..||.+|+++....+.+++.|+||..++|..+..+.+.||+.|......
T Consensus       206 ~~~~i~-~~--~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (318)
T cd05582         206 TMTMIL-KA--KLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGRPD  282 (318)
T ss_pred             HHHHHH-cC--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCCCCCCcc
Confidence            456666 44  677888999999999999999999999997444468999999999999999999999999999887766


Q ss_pred             CCCCCCC-CCCCCCCC------CCCCCCCCCCCccC
Q psy3183          83 DTSNFDR-YSAENDIK------GPTDTSNFDRYSAE  111 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~------~~~~~~~f~~f~~~  111 (126)
                      +..+++. +....+..      +......|.||+|+
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  318 (318)
T cd05582         283 DTFYFDPEFTSRTPKDSPGIPPSANAHQLFRGFSFV  318 (318)
T ss_pred             hhhhcCcccccCccccCCCCccccccccccCCCEeC
Confidence            6666664 33211111      11234467888773

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.21  E-value=8.5e-11  Score=89.73  Aligned_cols=103  Identities=29%  Similarity=0.584  Sum_probs=74.7

Q ss_pred             HHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      ++.+|+ .+...+.+|.  .++.++++||.+||. +|.+|++.  .++.+|+.||||.+++|..+..+...+|  +.+.+
T Consensus       244 ~~~~i~-~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~--~~~~ei~~hp~f~~~~~~~~~~~~~~~~--~~~~~  317 (360)
T cd05627         244 TYRKVM-NWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS--NGVEEIKSHPFFEGVDWGHIRERPAAIP--IEIKS  317 (360)
T ss_pred             HHHHHH-cCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCC--CCHHHHhcCCCCCCCCHHHHhcCCCCCC--ccCCC
Confidence            456666 4323456665  379999999999885 99999985  6789999999999999999988775555  35667


Q ss_pred             CCCCCCCCCCCCCCCCCC---------CCCCCCCCCCccC
Q psy3183          81 PTDTSNFDRYSAENDIKG---------PTDTSNFDRYSAE  111 (126)
Q Consensus        81 ~~d~~~fd~~~~e~~~~~---------~~~~~~f~~f~~~  111 (126)
                      ..+.++|+.+........         ....-.|.+|+|.
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (360)
T cd05627         318 IDDTSNFDEFPESDILQPAENTIEPDYKSKDWVFLNYTYK  357 (360)
T ss_pred             cchhhhcCCCCcccccCCCccccccccCcCCcccCCceee
Confidence            888899987654332211         1224468888885

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.20  E-value=1.1e-10  Score=87.82  Aligned_cols=87  Identities=30%  Similarity=0.682  Sum_probs=73.4

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|. ..  ...+++.++..+++||.+||+++|.+|++. ...+.+++.|+||..++|..+..+++.||+.|.....
T Consensus       203 ~~~~~i~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (325)
T cd05602         203 EMYDNIL-NK--PLQLKPNITNSARHLLEGLLQKDRTKRLGA-KDDFMEIKNHIFFSPINWDDLINKKITPPFNPNVSGP  278 (325)
T ss_pred             HHHHHHH-hC--CcCCCCCCCHHHHHHHHHHcccCHHHCCCC-CCCHHHHhcCcccCCCCHHHHHhCCCCcCcCCCCCCc
Confidence            3456676 33  667778899999999999999999999987 3456799999999999999999999999999998888


Q ss_pred             CCCCCCCC-CCC
Q psy3183          82 TDTSNFDR-YSA   92 (126)
Q Consensus        82 ~d~~~fd~-~~~   92 (126)
                      .+...|+. ++.
T Consensus       279 ~~~~~~~~~~~~  290 (325)
T cd05602         279 NDLRHFDPEFTE  290 (325)
T ss_pred             chhhhcCCcccc
Confidence            88888875 444

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=8.9e-11  Score=88.50  Aligned_cols=87  Identities=36%  Similarity=0.743  Sum_probs=72.4

Q ss_pred             hHHHHHHhcCCCcccCCC-CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPK-HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~-~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      +++++|. .+  ...+|. .++.++++||++||..+|.+|++. ...+.+++.||||..++|..+..+.+.||+.|....
T Consensus       204 ~~~~~i~-~~--~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~-~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (330)
T cd05586         204 QMYRNIA-FG--KVRFPKNVLSDEGRQFVKGLLNRNPQHRLGA-HRDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDS  279 (330)
T ss_pred             HHHHHHH-cC--CCCCCCccCCHHHHHHHHHHcCCCHHHCCCC-CCCHHHHhcCccccCCCHHHHHhCCCCCCccCCCCC
Confidence            3556676 44  667774 479999999999999999999975 345699999999999999999999999999999988


Q ss_pred             CCCCCCCCC-CCC
Q psy3183          81 PTDTSNFDR-YSA   92 (126)
Q Consensus        81 ~~d~~~fd~-~~~   92 (126)
                      ..+.++|+. |..
T Consensus       280 ~~~~~~~~~~~~~  292 (330)
T cd05586         280 DEDVSNFDPEFTN  292 (330)
T ss_pred             CcchhhcCccccc
Confidence            888888875 443

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.18  E-value=1.3e-10  Score=87.45  Aligned_cols=87  Identities=33%  Similarity=0.693  Sum_probs=74.1

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      +++.|. ..  .+.+|..+++++++||.+||..||.+|++.....+.+|+.|+||.++.|..+..+.+.||+.|......
T Consensus       204 ~~~~i~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (325)
T cd05594         204 LFELIL-ME--EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSET  280 (325)
T ss_pred             HHHHHh-cC--CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcc
Confidence            455566 33  678899999999999999999999999965444579999999999999999999999999999988888


Q ss_pred             CCCCCCC-CCC
Q psy3183          83 DTSNFDR-YSA   92 (126)
Q Consensus        83 d~~~fd~-~~~   92 (126)
                      +..+|+. ++.
T Consensus       281 ~~~~~~~~~~~  291 (325)
T cd05594         281 DTRYFDEEFTA  291 (325)
T ss_pred             hhhhcCchhhc
Confidence            8888886 444

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.17  E-value=4.4e-11  Score=88.38  Aligned_cols=64  Identities=27%  Similarity=0.569  Sum_probs=58.7

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      ...++..++.++++||++||..||.+|+++...++.+++.||||.+++|..+..+.+.|||.|.
T Consensus       221 ~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05631         221 QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPD  284 (285)
T ss_pred             cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence            4567778999999999999999999999876567899999999999999999999999999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.17  E-value=1e-10  Score=86.42  Aligned_cols=85  Identities=44%  Similarity=0.856  Sum_probs=74.5

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      +++++. .+  ...+|..++...+++|.+||..+|.+|++.....+.+++.||||..++|..+....+.+|+.|......
T Consensus       206 ~~~~~~-~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (290)
T cd05580         206 IYEKIL-EG--KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVKGPG  282 (290)
T ss_pred             HHHHHh-cC--CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCCCCcc
Confidence            455666 44  677888899999999999999999999976556779999999999999999999999999999998888


Q ss_pred             CCCCCCCC
Q psy3183          83 DTSNFDRY   90 (126)
Q Consensus        83 d~~~fd~~   90 (126)
                      +.+.|++|
T Consensus       283 ~~~~~~~~  290 (290)
T cd05580         283 DTSNFDDY  290 (290)
T ss_pred             ccccccCC
Confidence            88888864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.15  E-value=3.2e-10  Score=85.13  Aligned_cols=105  Identities=29%  Similarity=0.550  Sum_probs=81.5

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      ++..|+ ..  .+.+|...+.+++++|.+||+++|.+|++. ...+.+++.|+||..++|..+..+.+.||+.|......
T Consensus       204 ~~~~i~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (321)
T cd05603         204 MYDNIL-HK--PLQLPGGKTVAACDLLVGLLHKDQRRRLGA-KADFLEIKNHVFFSPINWDDLYHKRITPPYNPNVAGPA  279 (321)
T ss_pred             HHHHHh-cC--CCCCCCCCCHHHHHHHHHHccCCHhhcCCC-CCCHHHHhCCCCcCCCCHHHHhcCCCCCCcCCCCCCcc
Confidence            566777 44  678888899999999999999999999986 23567999999999999999999999999999888878


Q ss_pred             CCCCCCC-CCCCCCCCC-----------CCCCCCCCCCccC
Q psy3183          83 DTSNFDR-YSAENDIKG-----------PTDTSNFDRYSAE  111 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~-----------~~~~~~f~~f~~~  111 (126)
                      +...|+. ++.+....+           +...+.|.||+|.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (321)
T cd05603         280 DLRHFDPEFTQEAVSSSVGQTPDLTASSSSASSAFLGFSYA  320 (321)
T ss_pred             hhhhcCCcccccccccccCCCCcccccccccccccCCCccC
Confidence            8888875 433222221           2234467777764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.14  E-value=3e-10  Score=86.88  Aligned_cols=104  Identities=29%  Similarity=0.544  Sum_probs=74.2

Q ss_pred             hHHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           2 QTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      +++++|+ .+...+.+|.  .+|.++++||.+||. ++.+|++.  .++.+|+.||||++++|..+..+...+|  +.+.
T Consensus       243 ~~~~~i~-~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r--~~~~ei~~hp~f~~~~~~~~~~~~~~~~--~~~~  316 (363)
T cd05628         243 ETYKKVM-NWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGA--PGVEEIKTNPFFEGVDWEHIRERPAAIP--IEIK  316 (363)
T ss_pred             HHHHHHH-cCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCC--CCHHHHhCCCCCCCCCHHHHHhCCCCCC--ccCC
Confidence            3566777 4323566775  479999999999986 68888764  5679999999999999999988765444  3556


Q ss_pred             CCCCCCCCCCCCCCCCCCCC------------CCCCCCCCCccC
Q psy3183          80 GPTDTSNFDRYSAENDIKGP------------TDTSNFDRYSAE  111 (126)
Q Consensus        80 ~~~d~~~fd~~~~e~~~~~~------------~~~~~f~~f~~~  111 (126)
                      +..++++|+.+.........            .....|.+|+|.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (363)
T cd05628         317 SIDDTSNFDEFPDSDILKPTVATSNHPETDYKNKDWVFINYTYK  360 (363)
T ss_pred             CcchhhccCCCCccccccccccccCCcccccCcCCcccCCceee
Confidence            77888999987654322210            113368888885

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=2.4e-10  Score=87.13  Aligned_cols=104  Identities=37%  Similarity=0.646  Sum_probs=76.6

Q ss_pred             HHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      .+..|+ ++...+.+|.  .+++++++||.+||. +|.+|++.  .++.+++.||||++++|..+...  .+|++|.+.+
T Consensus       247 ~~~~i~-~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~--~~~~~ll~h~~~~~~~~~~~~~~--~~~~~~~~~~  320 (364)
T cd05599         247 TYRKII-NWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN--NGVNEIKSHPFFKGVDWEHIRER--PAPIIPELKS  320 (364)
T ss_pred             HHHHHH-cCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC--CCHHHHhcCCCcCCCCHHHHhhc--CCCCCCCCCC
Confidence            345565 4322345554  479999999999996 99999983  45599999999999999987654  4889999988


Q ss_pred             CCCCCCCCCCCCCCCCCC----------CCCCCCCCCCccCC
Q psy3183          81 PTDTSNFDRYSAENDIKG----------PTDTSNFDRYSAEN  112 (126)
Q Consensus        81 ~~d~~~fd~~~~e~~~~~----------~~~~~~f~~f~~~~  112 (126)
                      ..+.++|+.+..+.....          +..+..|.||+|.+
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (364)
T cd05599         321 ITDTSNFDDFEEIDLDVPTSPGPPRGKIKSKDLAFIGYTYKR  362 (364)
T ss_pred             chhhhhccccccccccccCCCccccccccccCCCCCCCeeeC
Confidence            889999987554332111          23466888888853

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=2.7e-10  Score=86.14  Aligned_cols=100  Identities=37%  Similarity=0.717  Sum_probs=76.1

Q ss_pred             HHHHHHhcCCCcccCCCC--CCHHHHHHHHHhhhcCcCccCC-CCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           3 TYNMIINVGIDKIPFPKH--VTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~--~s~~a~dli~~lL~~dp~~Rl~-~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      .+.+|+ .....+.+|..  +++++++||.+||. +|.+|++ +     .+++.||||++++|....  ...||++|.+.
T Consensus       238 ~~~~i~-~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~-----~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~  308 (350)
T cd05573         238 TYNKII-NWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSF-----EEIKSHPFFKGIDWENLR--ETKPPFVPELS  308 (350)
T ss_pred             HHHHHh-ccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCH-----HHHhcCCCcCCCCHHHHh--hCCCCcCCCCC
Confidence            345555 32124556644  59999999999997 9999998 6     999999999999999877  44489999999


Q ss_pred             CCCCCCCCCCCCCCCCCCC----------CCCCCCCCCCccC
Q psy3183          80 GPTDTSNFDRYSAENDIKG----------PTDTSNFDRYSAE  111 (126)
Q Consensus        80 ~~~d~~~fd~~~~e~~~~~----------~~~~~~f~~f~~~  111 (126)
                      +..+..+|+....+.....          ...+..|.||+|.
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (350)
T cd05573         309 SPLDTSNFDDFEDDKDLSDYLSQNSKKLNKGKQLAFVGFTYK  350 (350)
T ss_pred             CchhhhhcCCCCcccccccccccccccccccccCccCCCccC
Confidence            9999999998655443332          1246689999884

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.13  E-value=2.8e-10  Score=87.55  Aligned_cols=103  Identities=24%  Similarity=0.436  Sum_probs=77.3

Q ss_pred             HHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCc--cCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCC
Q psy3183           3 TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAE--RLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI   78 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~--Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~   78 (126)
                      ++.+|+ .....+.+|.  .+|.++++||++||+.+|.+  |+++     .+|+.||||++.+|.....+...+|++|..
T Consensus       255 ~~~~i~-~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~-----~ell~h~~~~~~~~~~~~~~~~~~~~~p~~  328 (370)
T cd05596         255 TYSKIM-DHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGV-----DEIKSHPFFKNDQWTFDNIRETVAPVVPEL  328 (370)
T ss_pred             HHHHHH-cCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCH-----HHHhcCcccCCCChhhHHhcCCCcCccCcC
Confidence            566776 4323466775  57999999999999988876  7666     999999999999998877788889999999


Q ss_pred             CCCCCCCCCCCCCCCC-CC---CC----CCCCCCCCCCccC
Q psy3183          79 KGPTDTSNFDRYSAEN-DI---KG----PTDTSNFDRYSAE  111 (126)
Q Consensus        79 ~~~~d~~~fd~~~~e~-~~---~~----~~~~~~f~~f~~~  111 (126)
                      ....+..+|+....+. ..   ..    ......|.||+|.
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (370)
T cd05596         329 SSDIDTSNFDDIEDDDKNEETFPLPKAFAGNQLPFIGFTYS  369 (370)
T ss_pred             CCcchhhhcCCccccccccccCCCccccccccCccCCCeec
Confidence            8888899998643322 11   11    1234468888884

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.10  E-value=7e-10  Score=85.33  Aligned_cols=75  Identities=37%  Similarity=0.659  Sum_probs=61.6

Q ss_pred             cccCC--CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCCCCCCCCCC
Q psy3183          14 KIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYS   91 (126)
Q Consensus        14 ~~~~p--~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d~~~fd~~~   91 (126)
                      .+.+|  ..+++++++||.+|+ .+|.+|++.  .++.+|+.||||++++|..... +..+|+.|.+....++++|+.+.
T Consensus       266 ~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~--~~~~ei~~hp~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  341 (382)
T cd05625         266 SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGK--NGADEIKAHPFFKTIDFSSDLR-QQSAPYIPKITHPTDTSNFDPVD  341 (382)
T ss_pred             CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCC--CCHHHHhcCCCcCCcChHHHHh-cCCCCccCcCCCcchhhhcCCCC
Confidence            34455  358999999999987 499999984  5679999999999999987654 45689999999999999998754


Q ss_pred             C
Q psy3183          92 A   92 (126)
Q Consensus        92 ~   92 (126)
                      .
T Consensus       342 ~  342 (382)
T cd05625         342 P  342 (382)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.04  E-value=1.3e-09  Score=82.06  Aligned_cols=78  Identities=40%  Similarity=0.688  Sum_probs=63.3

Q ss_pred             HHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      .+.+|+ .....+.+|.  .++.++++||.+||. +|.+|++.     .+++.||||..++|..+..  ..||+.|.+..
T Consensus       217 ~~~~i~-~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~-----~~l~~h~~~~~~~~~~~~~--~~~~~~~~~~~  287 (330)
T cd05601         217 TYNNIM-NFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGY-----EGLCCHPFFSKIDWNNIRN--SLPPFVPTLKS  287 (330)
T ss_pred             HHHHHH-cCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCH-----HHHhCCCCcCCCCHHHHhh--CCCCccCcCCC
Confidence            455666 3222345553  579999999999997 99999998     9999999999999998875  44889999988


Q ss_pred             CCCCCCCCC
Q psy3183          81 PTDTSNFDR   89 (126)
Q Consensus        81 ~~d~~~fd~   89 (126)
                      ..+..+|+.
T Consensus       288 ~~~~~~~~~  296 (330)
T cd05601         288 DDDTSNFDE  296 (330)
T ss_pred             cchhhhcCC
Confidence            888999876

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>smart00133 S_TK_X Extension to Ser/Thr-type protein kinases

Probab=99.00  E-value=5e-10  Score=65.76  Aligned_cols=54  Identities=44%  Similarity=0.875  Sum_probs=45.0

Q ss_pred             CCCChhHHhcCCCCCCcccCCCCCCCCCCCCC-CCCCCCCCCCCC--------CCCCCCCccC
Q psy3183          58 QGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDR-YSAENDIKGPTD--------TSNFDRYSAE  111 (126)
Q Consensus        58 ~~v~w~~l~~~~~~ppf~P~~~~~~d~~~fd~-~~~e~~~~~~~~--------~~~f~~f~~~  111 (126)
                      ++|+|+.|..+++.|||+|.+.+..++++|+. ++.+....++..        +..|.||+|.
T Consensus         1 ~~idW~~l~~r~~~pP~~P~~~~~~d~s~fd~~~~~~~~~~s~~~~~~~~~~~~~~F~gfsy~   63 (64)
T smart00133        1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDDEFTEETPVLTPVDSPASGGSQQEPFRGFSYV   63 (64)
T ss_pred             CCCCHHHHHhCCCCCCcccccCCccHHhHcCCcCCCCCCCCCCCCccccccccccccCCCccc
Confidence            47999999999999999999999999999997 777765555432        3689999985

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.98  E-value=9.3e-10  Score=81.09  Aligned_cols=64  Identities=27%  Similarity=0.686  Sum_probs=56.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      ...+|..++.++++||.+||..||.+|++.....+.+++.||||++++|..+....+++|+.|.
T Consensus       217 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~  280 (280)
T cd05608         217 SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVPD  280 (280)
T ss_pred             CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCCC
Confidence            4567778999999999999999999999764445699999999999999999999998998873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.97  E-value=2.5e-09  Score=82.44  Aligned_cols=105  Identities=25%  Similarity=0.478  Sum_probs=74.8

Q ss_pred             HHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      ++.+|+ .....+.+|.  .++..+++||.+||+ ++.+|++.  .++.+++.||||++..|.....+...+|+.|.+..
T Consensus       255 ~~~~i~-~~~~~~~~p~~~~~s~~~~~li~~~L~-~~~~r~~R--~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~~~~  330 (370)
T cd05621         255 TYSKIM-DHKNSLNFPEDVEISKHAKNLICAFLT-DREVRLGR--NGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSS  330 (370)
T ss_pred             HHHHHH-hCCcccCCCCcccCCHHHHHHHHHHcc-CchhccCC--CCHHHHhcCcccCCCCcChHhcCCCCCCcCCCCCC
Confidence            456666 3323466665  469999999999998 44555432  34599999999999888776667778999999999


Q ss_pred             CCCCCCCCCCCCCCC-CC---C----CCCCCCCCCCccC
Q psy3183          81 PTDTSNFDRYSAEND-IK---G----PTDTSNFDRYSAE  111 (126)
Q Consensus        81 ~~d~~~fd~~~~e~~-~~---~----~~~~~~f~~f~~~  111 (126)
                      ..+.++|+...++.. ..   .    ......|.||+|.
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (370)
T cd05621         331 DIDSSNFDDIEDDKGDVETFPIPKAFVGNQLPFIGFTYY  369 (370)
T ss_pred             cchhhhcCCccccccccccCCCCccccccccccCCCEec
Confidence            889999986443221 11   1    1335789999884

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0606|consensus

Probab=98.97  E-value=9e-10  Score=93.30  Aligned_cols=81  Identities=36%  Similarity=0.696  Sum_probs=73.3

Q ss_pred             hHHHHHHhcCCCcccCCC---CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCC
Q psy3183           2 QTYNMIINVGIDKIPFPK---HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI   78 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~---~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~   78 (126)
                      +||.+++   .+.+.+|.   .+.++++++|.+||+.+|..|+|.  +|+-++++|+||+.+||..|+.++  ..|+|.+
T Consensus       265 elfg~vi---sd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt--~ga~evk~h~ff~~LDw~~llRqk--aefvpql  337 (1205)
T KOG0606|consen  265 ELFGQVI---SDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGT--GGALEVKQHGFFQLLDWKSLLRQK--AEFVPQL  337 (1205)
T ss_pred             HHHhhhh---hhhccccccCcCCCHHHHHHHHHHHHhChHhhccc--chhhhhhhccceeecccchhhhhh--ccccccc
Confidence            5778888   45788884   578999999999999999999998  689999999999999999999999  8999999


Q ss_pred             CCCCCCCCCCC
Q psy3183          79 KGPTDTSNFDR   89 (126)
Q Consensus        79 ~~~~d~~~fd~   89 (126)
                      ...+|+++||-
T Consensus       338 ~~eddtsyfdT  348 (1205)
T KOG0606|consen  338 ESEDDTSYFDT  348 (1205)
T ss_pred             cccccchhhcc
Confidence            99999999984

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.95  E-value=3.5e-09  Score=81.54  Aligned_cols=74  Identities=35%  Similarity=0.548  Sum_probs=58.3

Q ss_pred             cccCCC--CCCHHHHHHHHHhhhcCcC--ccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCCCCCCCC
Q psy3183          14 KIPFPK--HVTRTAQSLIKALCKESPA--ERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDR   89 (126)
Q Consensus        14 ~~~~p~--~~s~~a~dli~~lL~~dp~--~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d~~~fd~   89 (126)
                      .+.+|.  .+++++++||.+||...+.  .|+++     .+|+.||||.+++|..... ..++|+.|.+....++++|+.
T Consensus       266 ~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~-----~~~l~hp~f~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~  339 (381)
T cd05626         266 TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA-----DDIKAHPFFSEVDFSSDIR-TQPAPYVPKISHPMDTSNFDP  339 (381)
T ss_pred             ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH-----HHHhcCcccCCCChhHHhh-cCCCCccCcCCCcchhhhcCC
Confidence            345554  5899999999998865443  36666     9999999999999987654 456889999999999999987


Q ss_pred             CCCC
Q psy3183          90 YSAE   93 (126)
Q Consensus        90 ~~~e   93 (126)
                      ...+
T Consensus       340 ~~~~  343 (381)
T cd05626         340 VEEE  343 (381)
T ss_pred             CCcc
Confidence            5443

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.95  E-value=6.2e-09  Score=80.18  Aligned_cols=106  Identities=26%  Similarity=0.483  Sum_probs=76.2

Q ss_pred             HHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      ++.+|+ .....+.+|.  .++..+++||.+||. ++.+|++.  .++.+|+.|+||++..|.....+...+|++|.+..
T Consensus       255 ~~~~i~-~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r--~~~~ei~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (371)
T cd05622         255 TYSKIM-NHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGR--NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSS  330 (371)
T ss_pred             HHHHHH-cCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCC--CCHHHHhcCcccCCCChhHHhcCCCCCCCCCCCCC
Confidence            567777 3322455664  689999999999997 77777654  56699999999999887766667778999999888


Q ss_pred             CCCCCCCCCCCCCCCC--C--CC----CCCCCCCCCccCC
Q psy3183          81 PTDTSNFDRYSAENDI--K--GP----TDTSNFDRYSAEN  112 (126)
Q Consensus        81 ~~d~~~fd~~~~e~~~--~--~~----~~~~~f~~f~~~~  112 (126)
                      ..+.++|+....+...  .  .+    .....|.||+|.+
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (371)
T cd05622         331 DIDTSNFDDIEEDKGEEETFPIPKAFVGNQLPFVGFTYYS  370 (371)
T ss_pred             cchhhhcCCCcccccccccCCCCccccccccccCCCeecC
Confidence            8888888763332221  1  11    1236899998863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=1.3e-08  Score=78.10  Aligned_cols=81  Identities=42%  Similarity=0.754  Sum_probs=64.1

Q ss_pred             HHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      ++.+|+ .+...+.+|.  .++.++++||.+||. +|.+|++.  .++.+++.||||++++|+.+.  .+.+|++|.+..
T Consensus       256 ~~~~i~-~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r--~~~~~~l~hp~~~~~~~~~~~--~~~~~~~~~~~~  329 (377)
T cd05629         256 TYRKII-NWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGR--GGAHEIKSHPFFRGVDWDTIR--QIRAPFIPQLKS  329 (377)
T ss_pred             HHHHHH-ccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCC--CCHHHHhcCCCcCCCCHHHHc--cCCCCcccCCCC
Confidence            456666 3323456665  479999999999997 89998854  566999999999999999884  556899999988


Q ss_pred             CCCCCCCCC
Q psy3183          81 PTDTSNFDR   89 (126)
Q Consensus        81 ~~d~~~fd~   89 (126)
                      ..+..+|..
T Consensus       330 ~~~~~~~~~  338 (377)
T cd05629         330 ITDTSYFPT  338 (377)
T ss_pred             ccccccCCc
Confidence            888887764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.88  E-value=4.1e-09  Score=77.86  Aligned_cols=64  Identities=25%  Similarity=0.520  Sum_probs=56.8

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      ...+|..++..+++||.+||..||.+|+++....+.+++.|+||...+|..+..+.+.||+.|.
T Consensus       221 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05605         221 QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCPD  284 (285)
T ss_pred             ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCCC
Confidence            4566778999999999999999999999764446699999999999999999999999999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.82  E-value=5.2e-09  Score=77.39  Aligned_cols=62  Identities=34%  Similarity=0.603  Sum_probs=55.7

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      .++..+++++++||.+||+.||.+|+++..+++.+++.||||+.++|..+...+..|||.|.
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05630         223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKPD  284 (285)
T ss_pred             hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCCC
Confidence            45667899999999999999999999975556799999999999999999998888999885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.81  E-value=6.3e-09  Score=76.27  Aligned_cols=64  Identities=30%  Similarity=0.688  Sum_probs=55.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      ...+|..++++++++|.+||..+|.+|++.....+.+++.||||..++|..+......|||.|.
T Consensus       214 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~  277 (277)
T cd05577         214 AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIPD  277 (277)
T ss_pred             cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcCCCCCCCCCC
Confidence            4456677899999999999999999999764446789999999999999999988888998874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.79  E-value=1.3e-08  Score=74.85  Aligned_cols=58  Identities=22%  Similarity=0.523  Sum_probs=50.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      ..++.++++||.+||..||.+|+++. ....+++.|+||++++|..+..+.++|||.|.
T Consensus       220 ~~~~~~~~~li~~~L~~~P~~R~~~~-~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~  277 (277)
T cd05607         220 QNFTEESKDICRLFLAKKPEDRLGSR-EKNDDPRKHEFFKTINFPRLEAGLIPPPFVPD  277 (277)
T ss_pred             ccCCHHHHHHHHHHhccCHhhCCCCc-cchhhhhcChhhcCCCHHHHhcCcCCCCCCCC
Confidence            46899999999999999999999872 22367889999999999999999999998773

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.79  E-value=1.2e-08  Score=75.07  Aligned_cols=61  Identities=41%  Similarity=0.831  Sum_probs=54.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCccc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP   76 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P   76 (126)
                      ....|..++..++++|.+||+.+|++|+++  +++.+++.||||++++|+.+.++...|||.|
T Consensus       228 ~~~~~~~~~~~l~~li~~~l~~~p~~R~t~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  288 (288)
T cd05583         228 KPPFPKTMSAEARDFIQKLLEKDPKKRLGA--NGADEIKNHPFFQGIDWDDLAAKRIPAPFKP  288 (288)
T ss_pred             CCCCCcccCHHHHHHHHHHhcCCHhhccCc--chHHHHhcCcccccCCHHHHhhhccCCCCCC
Confidence            455667789999999999999999999987  6788999999999999999999998888764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.77  E-value=1.6e-08  Score=74.56  Aligned_cols=64  Identities=30%  Similarity=0.659  Sum_probs=55.0

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      ...+|..++.+++++|++||.+||.+|+++....+.++++||||++++|......+..+|.+|.
T Consensus       215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  278 (279)
T cd05633         215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYPPPLIPP  278 (279)
T ss_pred             CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhcCCCCCCCCCC
Confidence            3456678899999999999999999999865556799999999999999999888887876664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.77  E-value=5.3e-08  Score=73.59  Aligned_cols=81  Identities=44%  Similarity=0.799  Sum_probs=59.6

Q ss_pred             HHHHHHhcCCCcccCCC---CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           3 TYNMIINVGIDKIPFPK---HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~---~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      .+.+|+ .....+.+|.   .++.++++||++||..+ ..|++.  .++.+++.||||.+++|..+....  +|++|...
T Consensus       216 ~~~~i~-~~~~~~~~p~~~~~~s~~~~~li~~ll~~~-~~r~~r--~~~~~~~~h~~f~~~~~~~~~~~~--~~~~~~~~  289 (332)
T cd05623         216 TYGKIM-NHKERFQFPAQVTDVSEDAKDLIRRLICSR-EHRLGQ--NGIEDFKQHPFFTGIDWDNIRNCE--APYIPEVS  289 (332)
T ss_pred             HHHHHh-CCCccccCCCccccCCHHHHHHHHHHccCh-hhhcCC--CCHHHHhCCCCcCCCCHHHHhhCC--CCccCCCC
Confidence            456666 3322344553   57999999999999764 455543  456999999999999999987544  78889888


Q ss_pred             CCCCCCCCCC
Q psy3183          80 GPTDTSNFDR   89 (126)
Q Consensus        80 ~~~d~~~fd~   89 (126)
                      +..+.++++.
T Consensus       290 ~~~~~~~~~~  299 (332)
T cd05623         290 SPTDTSNFDV  299 (332)
T ss_pred             CCcccccCCC
Confidence            8777777653

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.72  E-value=2.4e-08  Score=73.71  Aligned_cols=63  Identities=29%  Similarity=0.599  Sum_probs=57.0

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      ..++..++.++.+||.+||..+|.+|+++...++.+++.|+||+.++|..+..+++.|||+|.
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05632         222 EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVPD  284 (285)
T ss_pred             cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCCC
Confidence            456677899999999999999999999976567799999999999999999999999999885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.72  E-value=1.1e-07  Score=71.98  Aligned_cols=81  Identities=43%  Similarity=0.804  Sum_probs=59.9

Q ss_pred             HHHHHHhcCCCcccCCC---CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           3 TYNMIINVGIDKIPFPK---HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~---~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      .+.+|+ .....+.+|.   .++.++++||.+||... .+|++.  .++.+++.|+||.+++|..+.  .+.+|++|...
T Consensus       216 ~~~~i~-~~~~~~~~p~~~~~~~~~~~~li~~ll~~~-~~~~~~--~~~~~~~~h~~f~~~~~~~~~--~~~~~~~p~~~  289 (331)
T cd05624         216 TYGKIM-NHEERFQFPSHITDVSEEAKDLIQRLICSR-ERRLGQ--NGIEDFKKHAFFEGIDWENIR--NLEAPYIPDVS  289 (331)
T ss_pred             HHHHHH-cCCCcccCCCccccCCHHHHHHHHHHccCc-hhhcCC--CCHHHHhcCCCcCCCCHHHHh--hCCCCccCCCC
Confidence            455565 3212344554   36899999999999854 466543  567999999999999999885  45588999888


Q ss_pred             CCCCCCCCCC
Q psy3183          80 GPTDTSNFDR   89 (126)
Q Consensus        80 ~~~d~~~fd~   89 (126)
                      ...+..+|+.
T Consensus       290 ~~~~~~~~~~  299 (331)
T cd05624         290 SPSDTSNFDV  299 (331)
T ss_pred             CcchhhhcCC
Confidence            8778788763

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0033|consensus

Probab=98.71  E-value=1.3e-08  Score=75.21  Aligned_cols=50  Identities=30%  Similarity=0.537  Sum_probs=45.1

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+|++|+ ++  .+.+|    +.+|++|++||++||..||++|++.     .|.+.|||..+
T Consensus       219 rlye~I~-~g--~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta-----~EAL~HpWi~~  272 (355)
T KOG0033|consen  219 RLYEQIK-AG--AYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITA-----DEALKHPWICN  272 (355)
T ss_pred             HHHHHHh-cc--ccCCCCcccCcCCHHHHHHHHHHhccChhhhccH-----HHHhCCchhcc
Confidence            5899999 77  77776    4689999999999999999999998     99999999985

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.70  E-value=4.7e-08  Score=73.76  Aligned_cols=66  Identities=32%  Similarity=0.623  Sum_probs=57.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCCCCCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSA   92 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d~~~fd~~~~   92 (126)
                      .++.++++||.+||..+|.+|+++     .+|+.||||.+++|..+.  ...||++|......+..+|+.+.+
T Consensus       228 ~~s~~~~~li~~~l~~~~~rr~s~-----~~ll~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  293 (333)
T cd05600         228 NLSDEAWDLITKLINDPSRRFGSL-----EDIKNHPFFKEVDWNELR--ELKPPFVPELESEIDTGYFDDFEN  293 (333)
T ss_pred             ccCHHHHHHHHHHhhChhhhcCCH-----HHHHhCcccCCCCHHHHh--hCCCCCCCCCCCcchhhhccCCCC
Confidence            458999999999999999999987     999999999999999877  566899999888778878876544

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.65  E-value=2.2e-07  Score=71.28  Aligned_cols=70  Identities=41%  Similarity=0.700  Sum_probs=58.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCCCCCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSA   92 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d~~~fd~~~~   92 (126)
                      ..++.++++||.+|+ .+|.+|++.  ..+.+++.||||++++|..+. +...+|++|.+....+.++|+....
T Consensus       269 ~~~s~~~~~li~~l~-~~p~~R~~~--~t~~ell~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  338 (376)
T cd05598         269 AKLSREASDLILRLC-CGAEDRLGK--NGADEIKAHPFFKGIDFASLI-RRQKAPYIPKITHPTDTSNFDPVDP  338 (376)
T ss_pred             CCCCHHHHHHHHHHh-cCHhhcCCC--CCHHHHhCCCCcCCCCHHHHh-hcCCCCCCCcCCCcchhhhcCCCCc
Confidence            368999999999987 599999953  355999999999999998877 5667889999888888888886444

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.63  E-value=1.2e-07  Score=70.46  Aligned_cols=65  Identities=43%  Similarity=0.826  Sum_probs=56.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFD   88 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d~~~fd   88 (126)
                      .++.++++||.+||..+|.+|++.  .++.+++.||||.+.+|..+....  ..++|.+....+.++||
T Consensus       241 ~~~~~~~~li~~~l~~~P~~R~~~--~~~~~ll~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  305 (305)
T cd05609         241 ALPADAQDLISRLLRQNPLERLGT--GGAFEVKQHRFFLGLDWNGLLRQK--AEFIPQLESEDDTSYFD  305 (305)
T ss_pred             cCCHHHHHHHHHHhccChhhccCc--cCHHHHHhCccccCCCHHHHhhcC--CCCCCCCCCccccccCC
Confidence            578999999999999999999986  567999999999999999877554  67889888877877765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.59  E-value=3.4e-07  Score=69.23  Aligned_cols=81  Identities=44%  Similarity=0.836  Sum_probs=58.9

Q ss_pred             HHHHHHhcCCCcccCCC---CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           3 TYNMIINVGIDKIPFPK---HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~---~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      ++..|+ .....+.+|.   .++.++++||++||.. +.+|++.  .++.+++.||||.+++|..+...  .+|+.|...
T Consensus       216 ~~~~i~-~~~~~~~~~~~~~~~~~~~~~li~~ll~~-~~~r~~r--~~~~~~l~hp~~~~~~~~~~~~~--~~~~~~~~~  289 (331)
T cd05597         216 TYGKIM-NHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGR--NGLQDFKDHPFFEGIDWDNIRNS--TAPYVPEVS  289 (331)
T ss_pred             HHHHHH-cCCCcccCCCccCCCCHHHHHHHHHHccC-cccccCC--CCHHHHhcCCCCCCCCHHHHhhC--CCCccCcCC
Confidence            345555 3212344443   4799999999999975 5555432  34599999999999999988754  478999988


Q ss_pred             CCCCCCCCCC
Q psy3183          80 GPTDTSNFDR   89 (126)
Q Consensus        80 ~~~d~~~fd~   89 (126)
                      +..+..+|+.
T Consensus       290 ~~~~~~~~~~  299 (331)
T cd05597         290 SPTDTSNFDV  299 (331)
T ss_pred             CcchhhhcCC
Confidence            8888888874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0588|consensus

Probab=98.58  E-value=5.3e-08  Score=79.57  Aligned_cols=53  Identities=21%  Similarity=0.414  Sum_probs=48.2

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .|+.++. +|  .+..|..+|++|++||++||.+||++|++.     ++|..|||+.+..-
T Consensus       219 ~LLlKV~-~G--~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~-----~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  219 VLLLKVQ-RG--VFEMPSNISSEAQDLLRRMLDVDPSTRITT-----EEILKHPFLSGYTS  271 (786)
T ss_pred             HHHHHHH-cC--cccCCCcCCHHHHHHHHHHhccCccccccH-----HHHhhCchhhcCCC
Confidence            4677888 77  999999999999999999999999999999     99999999987554

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.58  E-value=1.4e-07  Score=69.40  Aligned_cols=63  Identities=29%  Similarity=0.619  Sum_probs=53.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCccc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP   76 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P   76 (126)
                      ...+|..+|.+++++|.+||..+|.+|+.+....+.+++.||||+.++|..+..++.+|+.+|
T Consensus       215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~  277 (278)
T cd05606         215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYPPPLIP  277 (278)
T ss_pred             CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhcccCCCCCC
Confidence            456677789999999999999999999966434569999999999999999998887777665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0606|consensus

Probab=98.58  E-value=8.8e-08  Score=81.57  Aligned_cols=85  Identities=35%  Similarity=0.642  Sum_probs=74.6

Q ss_pred             ChHHHHHHhcCCCcccCC---CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183           1 MQTYNMIINVGIDKIPFP---KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus         1 ~~l~~~I~~~~~~~~~~p---~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      +++|++|+ ++  .+.+|   ...+.++++++.++|..++.+|+++  .|+.+++.|+||++++|+.+..++  .+|+|.
T Consensus      1041 q~~f~ni~-~~--~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a--~~~~e~k~~~~~~~~~~~~l~~q~--~~~~p~ 1113 (1205)
T KOG0606|consen 1041 QQIFENIL-NR--DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGA--KGAAEVKGHPFFQDVDWENLALQK--AEFVPQ 1113 (1205)
T ss_pred             hhhhhccc-cC--CCCCCCCccccChhhhhhhhhhhccCchhccCc--ccccccccCCccCCCCcccccccc--CccCCC
Confidence            46788998 55  66666   4689999999999999999999998  788899999999999999999888  888999


Q ss_pred             CCCCCCCCCCCC-CCC
Q psy3183          78 IKGPTDTSNFDR-YSA   92 (126)
Q Consensus        78 ~~~~~d~~~fd~-~~~   92 (126)
                      ..+..|+++|.. |..
T Consensus      1114 ~~s~~dtS~~~~r~~~ 1129 (1205)
T KOG0606|consen 1114 PESTQDTSYFESRFSE 1129 (1205)
T ss_pred             CCCCCccchhhccccc
Confidence            998999999975 653

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.56  E-value=1.7e-07  Score=68.99  Aligned_cols=63  Identities=32%  Similarity=0.682  Sum_probs=55.0

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCccc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP   76 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P   76 (126)
                      ...+|..++..+.+||.+||..+|.+|+++....+.+++.||||..++|+.+..+..++||.|
T Consensus       228 ~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  290 (290)
T cd05613         228 EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAAKKVPAPFKP  290 (290)
T ss_pred             CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHhhccCCCCCCC
Confidence            455677889999999999999999999987666789999999999999999888887777754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0575|consensus

Probab=98.55  E-value=6.1e-08  Score=78.16  Aligned_cols=49  Identities=31%  Similarity=0.623  Sum_probs=46.1

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ++|++|. ..  .+.+|..+|.+|++||.+||..||.+|+++     .+|+.|+||+
T Consensus       225 ety~~Ik-~~--~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl-----~~vL~h~Ff~  273 (592)
T KOG0575|consen  225 ETYNKIK-LN--EYSMPSHLSAEAKDLIRKLLRPNPSERPSL-----DEVLDHPFFK  273 (592)
T ss_pred             HHHHHHH-hc--CcccccccCHHHHHHHHHHhcCCcccCCCH-----HHHhcCHhhh
Confidence            6899999 55  899999999999999999999999999998     9999999994

>KOG0615|consensus

Probab=98.50  E-value=8.9e-08  Score=74.65  Aligned_cols=54  Identities=20%  Similarity=0.333  Sum_probs=46.4

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      .+.++|+ +|  .+.|-    ..+|.++++||++||..||++|++.     .+.++||||+.++-.
T Consensus       389 sl~eQI~-~G--~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~-----~eaL~hpW~~~~~~~  446 (475)
T KOG0615|consen  389 SLKEQIL-KG--RYAFGPLQWDRISEEALDLINWMLVVDPENRPSA-----DEALNHPWFKDAPCL  446 (475)
T ss_pred             cHHHHHh-cC--cccccChhhhhhhHHHHHHHHHhhEeCcccCcCH-----HHHhcChhhhccccc
Confidence            3788999 77  66543    4589999999999999999999998     999999999987743

>KOG0580|consensus

Probab=98.49  E-value=9.7e-08  Score=69.99  Aligned_cols=49  Identities=31%  Similarity=0.572  Sum_probs=46.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ++|++|. +.  ++.+|..+|.+|+|||.+||.++|.+|+..     .+++.|||..
T Consensus       229 etYkrI~-k~--~~~~p~~is~~a~dlI~~ll~~~p~~r~~l-----~~v~~hpwI~  277 (281)
T KOG0580|consen  229 ETYKRIR-KV--DLKFPSTISGGAADLISRLLVKNPIERLAL-----TEVMDHPWIV  277 (281)
T ss_pred             HHHHHHH-Hc--cccCCcccChhHHHHHHHHhccCccccccH-----HHHhhhHHHH
Confidence            6899999 55  899999999999999999999999999998     9999999975

>KOG4717|consensus

Probab=98.48  E-value=8.7e-08  Score=76.99  Aligned_cols=54  Identities=28%  Similarity=0.500  Sum_probs=49.9

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      ++..+|+ .+  .|..|..+|.+|+|||..||.+||++|.+.     ++|..|+|++.+|-.
T Consensus       226 ETLTmIm-DC--KYtvPshvS~eCrdLI~sMLvRdPkkRAsl-----EeI~s~~Wlq~~D~~  279 (864)
T KOG4717|consen  226 ETLTMIM-DC--KYTVPSHVSKECRDLIQSMLVRDPKKRASL-----EEIVSTSWLQAGDRG  279 (864)
T ss_pred             hhhhhhh-cc--cccCchhhhHHHHHHHHHHHhcCchhhccH-----HHHhccccccCCCCC
Confidence            5678899 77  899999999999999999999999999998     999999999988754

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.46  E-value=2.3e-07  Score=67.15  Aligned_cols=60  Identities=53%  Similarity=1.038  Sum_probs=49.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      +++.+. .+...+.+|..++.+++++|.+||..+|.+|+++...++.++++||||++++|+
T Consensus       202 ~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~  261 (262)
T cd05572         202 IYNDIL-KGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE  261 (262)
T ss_pred             HHHHHh-ccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence            345555 322456778788999999999999999999999655667999999999999995

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0583|consensus

Probab=98.45  E-value=1.5e-07  Score=73.17  Aligned_cols=50  Identities=30%  Similarity=0.589  Sum_probs=46.8

Q ss_pred             hHHHHHHhcCCCcccCCCCC-CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHV-TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~-s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++++|. ++  .+.+|.++ |+++++||++||..+|.+|+++     .+|+.||||+.
T Consensus       230 ~l~~ki~-~~--~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~-----~~i~~h~w~~~  280 (370)
T KOG0583|consen  230 NLYRKIR-KG--EFKIPSYLLSPEARSLIEKMLVPDPSTRITL-----LEILEHPWFQK  280 (370)
T ss_pred             HHHHHHh-cC--CccCCCCcCCHHHHHHHHHHcCCCcccCCCH-----HHHhhChhhcc
Confidence            5788899 66  99999999 9999999999999999999998     99999999985

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.43  E-value=3.8e-07  Score=68.05  Aligned_cols=64  Identities=39%  Similarity=0.819  Sum_probs=50.9

Q ss_pred             cccCCCC--CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183          14 KIPFPKH--VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus        14 ~~~~p~~--~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      .+.+|..  ++..++++|.+||.++|.+|++. +.++.+++.||||++++|..+....  ||-+|.+..
T Consensus       248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~-~~~~~~ll~~~~~~~~~~~~~~~~~--~~~~~~~~~  313 (316)
T cd05574         248 EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGS-KRGAAEIKQHPFFRGVNWALIRHTT--PPIIPRPDD  313 (316)
T ss_pred             CccCCCccccCHHHHHHHHHHccCCHhHCCCc-hhhHHHHHcCchhhcCChhhcccCC--CCCCCCccc
Confidence            4555543  68999999999999999999983 2345999999999999999877633  777776543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.42  E-value=4.1e-07  Score=75.38  Aligned_cols=77  Identities=38%  Similarity=0.701  Sum_probs=62.9

Q ss_pred             HHHHHHhcCCCcccCC---CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           3 TYNMIINVGIDKIPFP---KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p---~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      ++..|+ ..  .+.+|   ..++..+.++|.+||..+|.+|+++     .+++.|+||..++|..+....  +||.|...
T Consensus       588 ~~~~il-~~--~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta-----~e~l~h~~~~~~~~~~~~~~~--~~~~~~~~  657 (669)
T cd05610         588 VFQNIL-NR--DIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGL-----KELKQHPLFHGVDWENLQNQT--MPFIPQPD  657 (669)
T ss_pred             HHHHHH-hc--CCCCCcccccCCHHHHHHHHHHcccChhHCcCH-----HHHHhCHhhcCCCHHHhcccC--CCCCCCCC
Confidence            455666 33  44444   3578899999999999999999998     999999999999998888666  88999887


Q ss_pred             CCCCCCCCCC
Q psy3183          80 GPTDTSNFDR   89 (126)
Q Consensus        80 ~~~d~~~fd~   89 (126)
                      ...|..+|+.
T Consensus       658 ~~~~~~~~~~  667 (669)
T cd05610         658 DETDTSYFEA  667 (669)
T ss_pred             Cccccccccc
Confidence            7778888764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0585|consensus

Probab=98.39  E-value=2.6e-07  Score=73.25  Aligned_cols=50  Identities=30%  Similarity=0.677  Sum_probs=45.0

Q ss_pred             ChHHHHHHhcCCCcccCCCC--CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           1 MQTYNMIINVGIDKIPFPKH--VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         1 ~~l~~~I~~~~~~~~~~p~~--~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ++||.+|+ +  +.+.||..  ++.+++|||++||++||.+|++.     .+|+.|||..
T Consensus       325 ~~l~~KIv-n--~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l-----~~ik~Hpwvt  376 (576)
T KOG0585|consen  325 LELFDKIV-N--DPLEFPENPEINEDLKDLIKRLLEKDPEQRITL-----PDIKLHPWVT  376 (576)
T ss_pred             HHHHHHHh-c--CcccCCCcccccHHHHHHHHHHhhcChhheeeh-----hhheecceec
Confidence            47899999 3  48999955  89999999999999999999998     9999999975

>KOG0604|consensus

Probab=98.38  E-value=1.8e-07  Score=70.71  Aligned_cols=49  Identities=33%  Similarity=0.587  Sum_probs=43.6

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +-++|. .|  .+.||    ..+|.+++|+|++||..+|++|+++     ++++.|||...
T Consensus       275 Mk~rI~-~g--qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI-----~~~m~hpwi~~  327 (400)
T KOG0604|consen  275 MKRRIR-TG--QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTI-----EEVMDHPWINQ  327 (400)
T ss_pred             HHhHhh-cc--CccCCChhHhHHHHHHHHHHHHHhcCCchhheeH-----HHhhcCchhcc
Confidence            456788 67  89999    3589999999999999999999999     99999999974

>KOG0599|consensus

Probab=98.28  E-value=3.2e-07  Score=68.87  Aligned_cols=48  Identities=29%  Similarity=0.530  Sum_probs=42.0

Q ss_pred             HHHHHHhcCCCcccC--C--CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           3 TYNMIINVGIDKIPF--P--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         3 l~~~I~~~~~~~~~~--p--~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      +.+.|+ .|  ++.|  |  ..+|.+++|||++||+.||.+|+++     ++.+.||||.
T Consensus       236 MLR~Im-eG--kyqF~speWadis~~~KdLIsrlLqVdp~~Rita-----ke~LaHpff~  287 (411)
T KOG0599|consen  236 MLRMIM-EG--KYQFRSPEWADISATVKDLISRLLQVDPTKRITA-----KEALAHPFFI  287 (411)
T ss_pred             HHHHHH-hc--ccccCCcchhhccccHHHHHHHHHeeCchhcccH-----HHHhcChHHH
Confidence            578888 77  6655  4  3589999999999999999999998     9999999996

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.28  E-value=1.3e-06  Score=62.68  Aligned_cols=55  Identities=40%  Similarity=0.762  Sum_probs=44.9

Q ss_pred             HHHHHHhcCCCcccCCCCC--CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183           3 TYNMIINVGIDKIPFPKHV--TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~--s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ++..+. .+  .+.+|...  +..+.+||.+||+.+|.+|++.  ..+.+++.||||.+++|
T Consensus       209 ~~~~~~-~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~--~~~~~~l~~~~~~~~~~  265 (265)
T cd05579         209 IFQNIL-NG--KIEWPEDVEVSDEAIDLISKLLVPDPEKRLGA--KSIEEIKNHPFFKGIDW  265 (265)
T ss_pred             HHHHHh-cC--CcCCCccccCCHHHHHHHHHHhcCCHhhcCCC--ccHHHHhcCccccCCCC
Confidence            344455 33  45566554  8999999999999999999987  77889999999999998

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0607|consensus

Probab=98.25  E-value=6.7e-07  Score=68.35  Aligned_cols=54  Identities=28%  Similarity=0.508  Sum_probs=48.4

Q ss_pred             hHHHHHHhcCCCcccCCC----CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183           2 QTYNMIINVGIDKIPFPK----HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~----~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      .||..|. .|  .+.||.    .+|.+|+|||+.||.+++..|+.+     .++..|||++.+.-.
T Consensus       313 ~LFesIQ-EG--kYeFPdkdWahIS~eakdlisnLlvrda~~rlsa-----~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  313 KLFESIQ-EG--KYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSA-----AQVLNHPWVQRCAPE  370 (463)
T ss_pred             HHHHHHh-cc--CCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhh-----hhccCCccccccchh
Confidence            5899999 77  899994    599999999999999999999998     999999999976543

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.22  E-value=1.2e-06  Score=63.26  Aligned_cols=43  Identities=37%  Similarity=0.686  Sum_probs=39.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      ..++.+++++|.+||..+|.+|+++  .++.+++.||||++++|+
T Consensus       218 ~~~~~~~~~~i~~~l~~~p~~R~~~--~~~~~~l~~~~~~~~~~~  260 (260)
T cd05611         218 EFCSPEAVDLINRLLCMDPAKRLGA--NGYQEIKSHPFFKSINWD  260 (260)
T ss_pred             ccCCHHHHHHHHHHccCCHHHccCC--CcHHHHHcChHhhcCCCC
Confidence            3578999999999999999999986  677899999999999995

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0581|consensus

Probab=98.20  E-value=1.4e-06  Score=66.88  Aligned_cols=51  Identities=14%  Similarity=0.261  Sum_probs=45.1

Q ss_pred             hHHHHHHhcCCCcccCCCC-CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKH-VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~-~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++..|+ .+ ..+..|.. +|++.++||.+||++||.+|.+.     .++++|||++.
T Consensus       289 ~Ll~~Iv-~~-ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~-----~qLl~Hpfi~~  340 (364)
T KOG0581|consen  289 ELLCAIV-DE-PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSA-----KQLLQHPFIKK  340 (364)
T ss_pred             HHHHHHh-cC-CCCCCCcccCCHHHHHHHHHHhcCCcccCCCH-----HHHhcCHHHhh
Confidence            5788898 43 57788986 99999999999999999999988     99999999973

>KOG0603|consensus

Probab=98.04  E-value=3.4e-06  Score=68.54  Aligned_cols=38  Identities=37%  Similarity=0.640  Sum_probs=35.1

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++..++|..|++||.+||+.||.+|+++     .+|..|+||
T Consensus       529 ~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~-----~~i~~h~w~  566 (612)
T KOG0603|consen  529 PKFSECVSDEAKDLLQQLLQVDPALRLGA-----DEIGAHPWF  566 (612)
T ss_pred             CccccccCHHHHHHHHHhccCChhhCcCh-----hhhccCcch
Confidence            34558999999999999999999999998     999999999

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.01  E-value=3.6e-06  Score=62.52  Aligned_cols=37  Identities=22%  Similarity=0.271  Sum_probs=34.1

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .+.++++||.+||+.||.+|+++     .+++.||||+++.+
T Consensus       260 ~~~~~~dli~~mL~~dp~~R~s~-----~~~l~h~~f~~~~~  296 (303)
T cd07869         260 YVNHAEDLASKLLQCFPKNRLSA-----QAALSHEYFSDLPP  296 (303)
T ss_pred             CChHHHHHHHHHhccCchhccCH-----HHHhcCcccccCCh
Confidence            45789999999999999999998     99999999998875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0032|consensus

Probab=97.98  E-value=8.7e-06  Score=63.63  Aligned_cols=51  Identities=22%  Similarity=0.516  Sum_probs=43.2

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +++.+|+ .+  .+.|+    ..+|..|++||++||..||.+|+++     .+++.|||+++.
T Consensus       245 ~~~~~i~-~~--~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta-----~~~L~HpWi~~~  299 (382)
T KOG0032|consen  245 EIFLAIL-RG--DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTA-----AQALQHPWIKSI  299 (382)
T ss_pred             HHHHHHH-cC--CCCCCCCCccccCHHHHHHHHHhcccCcccCCCH-----HHHhcCccccCC
Confidence            4567888 66  66655    4589999999999999999999998     999999998754

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=97.97  E-value=7.6e-06  Score=58.81  Aligned_cols=43  Identities=40%  Similarity=0.694  Sum_probs=38.4

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +.+|..++..+++||.+||+.||.+|++....++++++.||||
T Consensus       195 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         195 LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            4467789999999999999999999998766678999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=97.86  E-value=9.1e-06  Score=59.62  Aligned_cols=33  Identities=24%  Similarity=0.261  Sum_probs=31.2

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+|.++++||++||+.||.+|+++     .+++.||||
T Consensus       255 ~~s~~~~dll~~~L~~~P~~R~s~-----~~~l~hp~f  287 (287)
T cd07848         255 ILSGVLLDLMKNLLKLNPTDRYLT-----EQCLNHPAF  287 (287)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCH-----HHHhcCCCC
Confidence            478899999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00036 glycogen synthase kinase; Provisional

Probab=97.86  E-value=5.7e-06  Score=65.32  Aligned_cols=41  Identities=24%  Similarity=0.397  Sum_probs=36.1

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      +|...+.++++||.+||+.||.+|+++     .+++.||||..+..
T Consensus       319 ~p~~~~~~~~~li~~~L~~dP~~R~ta-----~e~l~hp~f~~~~~  359 (440)
T PTZ00036        319 FPKGTPDDAINFISQFLKYEPLKRLNP-----IEALADPFFDDLRD  359 (440)
T ss_pred             hccCCCHHHHHHHHHHCCCChhHCcCH-----HHHhCChhHHhhhc
Confidence            445678999999999999999999998     99999999986543

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=97.83  E-value=1.3e-05  Score=59.23  Aligned_cols=33  Identities=15%  Similarity=0.280  Sum_probs=31.4

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++++||++||+.||.+|+++     .+++.||||
T Consensus       256 ~~~~~~~dll~~mL~~dp~~R~t~-----~~~l~hp~f  288 (288)
T cd07871         256 RLDTDGIDLLSSLLLYETKSRISA-----EAALRHSYF  288 (288)
T ss_pred             CCCHHHHHHHHHhcCcCcccCCCH-----HHHhcCCCC
Confidence            578999999999999999999998     999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=97.75  E-value=2.2e-05  Score=58.21  Aligned_cols=37  Identities=16%  Similarity=0.306  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      .++.++++||.+||+.||.+|+++     .+|+.||||+.+.
T Consensus       257 ~~~~~~~~li~~ml~~dp~~R~t~-----~eil~h~~f~~~~  293 (301)
T cd07873         257 RLDSDGAELLSKLLQFEGRKRISA-----EEAMKHPYFHCLG  293 (301)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCH-----HHHhcCccccccc
Confidence            578899999999999999999998     9999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03209 serine/threonine kinase US3; Provisional

Probab=97.74  E-value=1.6e-05  Score=60.77  Aligned_cols=36  Identities=14%  Similarity=0.134  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++.++.+||.+||+.||.+|+++     .++++||||+.+
T Consensus       322 ~~~~~~~~li~~mL~~dP~~Rpta-----~e~l~hp~f~~~  357 (357)
T PHA03209        322 NLPIDGEFLVHKMLTFDAAMRPSA-----EEILNYPMFAQL  357 (357)
T ss_pred             CCCchHHHHHHHHHcCCcccCcCH-----HHHhcCchhccC
Confidence            457788899999999999999998     999999999864

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=97.70  E-value=2.7e-05  Score=58.08  Aligned_cols=32  Identities=19%  Similarity=0.297  Sum_probs=29.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+.++.+||++||+.||.+|+++     .+++.||||
T Consensus       286 ~~~~~~dli~~mL~~dP~~R~t~-----~e~l~hp~f  317 (317)
T cd07868         286 PDSKAFHLLQKLLTMDPIKRITS-----EQAMQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccCCCH-----HHHhcCCCC
Confidence            45689999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=97.66  E-value=2.5e-05  Score=58.16  Aligned_cols=36  Identities=14%  Similarity=0.337  Sum_probs=33.2

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++.++++||.+||..||.+|+++     .+++.||||+.+
T Consensus       257 ~~~~~~~~li~~~L~~dp~~R~t~-----~e~l~h~~~~~~  292 (309)
T cd07872         257 RLDTEGIELLTKFLQYESKKRISA-----EEAMKHAYFRSL  292 (309)
T ss_pred             CCCHHHHHHHHHhccCChhhCCCH-----HHHhcChhhhhc
Confidence            478999999999999999999998     999999999854

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=97.66  E-value=3.6e-05  Score=58.76  Aligned_cols=33  Identities=12%  Similarity=0.264  Sum_probs=30.7

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+.++++||.+||+.||.+|+++     .+++.||||.
T Consensus       290 ~~~~~~dll~~mL~~dP~~R~t~-----~e~L~hp~~~  322 (364)
T cd07875         290 KASQARDLLSKMLVIDASKRISV-----DEALQHPYIN  322 (364)
T ss_pred             ccHHHHHHHHHhcCcCcccCCCH-----HHHhcCcccc
Confidence            35789999999999999999998     9999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=97.65  E-value=6.9e-05  Score=57.46  Aligned_cols=39  Identities=18%  Similarity=0.222  Sum_probs=35.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ...+.++.+||.+||..||.+|+++     .+++.||||.+..+
T Consensus       258 ~~~~~~~~~li~~mL~~dP~~R~t~-----~e~l~hp~~~~~~~  296 (372)
T cd07853         258 SQATHEAVHLLCRMLVFDPDKRISA-----ADALAHPYLDEGRL  296 (372)
T ss_pred             CCCCHHHHHHHHHhCCCChhhCcCH-----HHHhcCHhhCCCcc
Confidence            4568899999999999999999998     99999999997654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=97.65  E-value=3.4e-05  Score=56.42  Aligned_cols=33  Identities=21%  Similarity=0.460  Sum_probs=31.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++++||.+||..||.+|++.     .+++.||||
T Consensus       252 ~~~~~~~~li~~~l~~~P~~R~t~-----~~il~h~~f  284 (284)
T cd07839         252 KLNSTGRDLLQNLLVCNPVQRISA-----EEALQHPYF  284 (284)
T ss_pred             cCCHHHHHHHHHHhcCChhhcCCH-----HHHhcCCCC
Confidence            478999999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=97.64  E-value=3.6e-05  Score=56.36  Aligned_cols=33  Identities=15%  Similarity=0.375  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++..+++||.+||+.||.+|+++     .+++.||||
T Consensus       256 ~~~~~~~~li~~~L~~dP~~R~t~-----~~~l~hp~f  288 (288)
T cd07863         256 EIEESGAQLLLEMLTFNPHKRISA-----FRALQHPFF  288 (288)
T ss_pred             CcCHHHHHHHHHHhccCcccCCCH-----HHHhcCCCC
Confidence            567889999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=97.63  E-value=9e-05  Score=52.93  Aligned_cols=50  Identities=34%  Similarity=0.674  Sum_probs=41.3

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +++.+. ..  .+.+|..++....++|++||..+|.+|++..  .+.+++.||||
T Consensus       201 ~~~~~~-~~--~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~--~~~~l~~~~~f  250 (250)
T cd05123         201 IYEKIL-KD--PLRFPEFLSPEARDLISGLLQKDPTKRLGSG--GAEEIKAHPFF  250 (250)
T ss_pred             HHHHHh-cC--CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcc--cHHHHHhCCCC
Confidence            455565 33  6778888999999999999999999999872  25799999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=97.63  E-value=7.9e-05  Score=54.88  Aligned_cols=44  Identities=16%  Similarity=0.332  Sum_probs=37.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc------CCCCCCCCh
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK------HKWFQGFDW   62 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~------hp~f~~v~w   62 (126)
                      ....|...+...+++|.+||..+|.+|++.     .++..      ||||++++|
T Consensus       239 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         239 YLDQPDNCPERVTDLMRMCWQFNPKMRPTF-----LEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhHCcCH-----HHHHHHHHhhcCCCCCCCCC
Confidence            345566778999999999999999999987     56644      999999998

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0597|consensus

Probab=97.62  E-value=4.4e-05  Score=62.25  Aligned_cols=50  Identities=24%  Similarity=0.480  Sum_probs=45.8

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++.+.|+   ++++.+|..+|.++++||.+||.+||.+|++.     .++..|||.++
T Consensus       207 ~Lv~~I~---~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW-----~~Ll~HpF~k~  256 (808)
T KOG0597|consen  207 QLVKSIL---KDPVKPPSTASSSFVNFLQGLLIKDPAQRLTW-----TDLLGHPFWKG  256 (808)
T ss_pred             HHHHHHh---cCCCCCcccccHHHHHHHHHHhhcChhhcccH-----HHHhcChHHhh
Confidence            4678888   56899999999999999999999999999998     99999999874

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=97.61  E-value=8.2e-05  Score=53.49  Aligned_cols=38  Identities=21%  Similarity=0.395  Sum_probs=34.5

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ...|..++.+++++|.+||..+|.+|+++     .+|+.||||
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~vl~~~~~  256 (256)
T cd08218         219 PPVSSHYSYDLRNLVSQLFKRNPRDRPSV-----NSILEKNFI  256 (256)
T ss_pred             CCCcccCCHHHHHHHHHHhhCChhhCcCH-----HHHhhCcCC
Confidence            34567789999999999999999999998     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=97.59  E-value=0.00011  Score=53.31  Aligned_cols=51  Identities=31%  Similarity=0.564  Sum_probs=41.4

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +++.+. ..  ...+|..++....+||.+||..+|.+|++.. .+..+++.||||
T Consensus       230 ~~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~~~~~ll~~~~~  280 (280)
T cd05581         230 TFQKIL-KL--EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVN-EGYDELKAHPFF  280 (280)
T ss_pred             HHHHHH-hc--CCCCCCccCHHHHHHHHHHhcCCHhhCCCcc-cCHHHHhcCCCC
Confidence            345555 33  5678888999999999999999999999862 255899999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=97.58  E-value=4.9e-05  Score=55.55  Aligned_cols=34  Identities=15%  Similarity=0.338  Sum_probs=31.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..++.+++++|.+||..||.+|+++     .+++.||||
T Consensus       251 ~~~~~~~~~li~~~l~~~P~~Rpt~-----~~~l~~~~f  284 (284)
T cd07860         251 PPLDEDGRDLLSQMLHYDPNKRISA-----KAALAHPFF  284 (284)
T ss_pred             ccCCHHHHHHHHHhcCCCcccCCCH-----HHHhcCCCC
Confidence            3578999999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=97.58  E-value=9.7e-05  Score=54.01  Aligned_cols=41  Identities=27%  Similarity=0.446  Sum_probs=35.0

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ...+..++..+++||.+||+.+|.+|++.    +++|+.||||.+
T Consensus       227 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~----~~~~l~h~~~~~  267 (267)
T PHA03390        227 LPFIKNVSKNANDFVQSMLKYNINYRLTN----YNEIIKHPFLKI  267 (267)
T ss_pred             CCcccccCHHHHHHHHHHhccChhhCCch----HHHHhcCCcccC
Confidence            34555789999999999999999999953    399999999974

>PHA03207 serine/threonine kinase US3; Provisional

Probab=97.57  E-value=4.4e-05  Score=59.16  Aligned_cols=42  Identities=17%  Similarity=0.018  Sum_probs=37.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhc
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRN   67 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~   67 (126)
                      ++.++++||++||+.+|.+|+++     .+++.||||...+|+.+.-
T Consensus       347 ~~~~~~~li~~ml~~dp~~Rpsa-----~e~l~~p~f~~~~~~~~~~  388 (392)
T PHA03207        347 MHMDVEYLIAKMLTFDQEFRPSA-----QDILSLPLFTKEPINLLNI  388 (392)
T ss_pred             cchhHHHHHHHHhccChhhCCCH-----HHHhhCchhhccchhhhcC
Confidence            46789999999999999999998     9999999999998887643

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=97.57  E-value=6.4e-05  Score=55.40  Aligned_cols=44  Identities=11%  Similarity=0.204  Sum_probs=39.6

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHh
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR   66 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~   66 (126)
                      |..++.++.+||.+||..+|.+|++.     .+|+.||||..++|....
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~~~~~~  281 (292)
T cd06644         238 PSKWSMEFRDFLKTALDKHPETRPSA-----AQLLEHPFVSSVTSNRPL  281 (292)
T ss_pred             CcccCHHHHHHHHHHhcCCcccCcCH-----HHHhcCccccccccchhH
Confidence            45678999999999999999999988     999999999999997643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=97.56  E-value=5.3e-05  Score=55.63  Aligned_cols=34  Identities=18%  Similarity=0.331  Sum_probs=31.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +.++..+++||.+||+.||.+|+++     .+++.||||
T Consensus       257 ~~~~~~~~~li~~~l~~~P~~R~s~-----~~~l~hp~f  290 (290)
T cd07862         257 TDIDELGKDLLLKCLTFNPAKRISA-----YSALSHPYF  290 (290)
T ss_pred             cCCCHHHHHHHHHHhccCchhcCCH-----HHHhcCCCC
Confidence            3578899999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=97.55  E-value=5.5e-05  Score=56.71  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=34.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .+++++++||.+||..+|.+|+++     .+++.||||+++..
T Consensus       261 ~~~~~~~~li~~~l~~~P~~Rpt~-----~e~l~hp~f~~~~~  298 (338)
T cd07859         261 NADPLALRLLERLLAFDPKDRPTA-----EEALADPYFKGLAK  298 (338)
T ss_pred             CCChHHHHHHHHHcCcCcccCCCH-----HHHhcCchhhhcCc
Confidence            467889999999999999999988     99999999987654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=97.53  E-value=0.00017  Score=54.96  Aligned_cols=41  Identities=17%  Similarity=0.291  Sum_probs=36.3

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ...+..++.++++||.+||..+|.+|+++     .+|+.||||...
T Consensus       294 ~~~~~~~~~~l~~li~~~l~~~P~~Rpt~-----~ell~hp~~~~~  334 (353)
T PLN00034        294 PEAPATASREFRHFISCCLQREPAKRWSA-----MQLLQHPFILRA  334 (353)
T ss_pred             CCCCCccCHHHHHHHHHHccCChhhCcCH-----HHHhcCcccccC
Confidence            34456789999999999999999999988     999999999863

>PTZ00284 protein kinase; Provisional

Probab=97.52  E-value=4.8e-05  Score=60.27  Aligned_cols=33  Identities=18%  Similarity=0.185  Sum_probs=30.2

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +..++|||.+||+.||.+|+++     .+++.||||..
T Consensus       411 ~~~~~dli~~mL~~dP~~R~ta-----~e~L~Hp~~~~  443 (467)
T PTZ00284        411 DDLLCDLIYGLLHYDRQKRLNA-----RQMTTHPYVLK  443 (467)
T ss_pred             hHHHHHHHHHhCCcChhhCCCH-----HHHhcCccccc
Confidence            4568899999999999999998     99999999974

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=97.52  E-value=6.1e-05  Score=55.00  Aligned_cols=33  Identities=18%  Similarity=0.380  Sum_probs=31.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++++||.+||..||.+|+++     .+|+.||||
T Consensus       253 ~~~~~~~~li~~~l~~dP~~Rpt~-----~~ll~~~~~  285 (285)
T cd07861         253 NLDEDGLDLLEKMLIYDPAKRISA-----KKALNHPYF  285 (285)
T ss_pred             CCCHHHHHHHHHHhcCChhhCCCH-----HHHhcCCCC
Confidence            478999999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=97.52  E-value=8.7e-05  Score=56.02  Aligned_cols=36  Identities=19%  Similarity=0.241  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++.++++||.+||..||.+|+++     .+|+.||||+..
T Consensus       272 ~~~~~l~~li~~~L~~~P~~Rpt~-----~ell~h~~~~~~  307 (331)
T cd06649         272 VFTPDFQEFVNKCLIKNPAERADL-----KMLMNHTFIKRS  307 (331)
T ss_pred             cccHHHHHHHHHHccCCcccCCCH-----HHHhcChHHhhc
Confidence            578999999999999999999998     999999999754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0198|consensus

Probab=97.52  E-value=0.00011  Score=56.05  Aligned_cols=41  Identities=15%  Similarity=0.343  Sum_probs=38.2

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+.+|..+|.++++||.+||.++|.+|+++     .+++.|||...
T Consensus       241 ~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta-----~eLL~hpf~~~  281 (313)
T KOG0198|consen  241 LPEIPDSLSDEAKDFLRKCFKRDPEKRPTA-----EELLEHPFLKQ  281 (313)
T ss_pred             CCCCCcccCHHHHHHHHHHhhcCcccCcCH-----HHHhhChhhhc
Confidence            467899999999999999999999999998     99999999974

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=97.51  E-value=5.9e-05  Score=56.08  Aligned_cols=34  Identities=15%  Similarity=0.262  Sum_probs=31.9

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++++++||.+||..||.+|+++     .+++.||||+.
T Consensus       262 ~~~~~~~li~~ml~~dp~~R~t~-----~~il~h~~f~~  295 (309)
T cd07845         262 LSEAGLRLLNFLLMYDPKKRATA-----EEALESSYFKE  295 (309)
T ss_pred             cCHHHHHHHHHHhcCChhhCcCH-----HHHhcChhhcc
Confidence            68999999999999999999998     99999999973

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=97.50  E-value=0.00012  Score=52.76  Aligned_cols=40  Identities=18%  Similarity=0.353  Sum_probs=34.7

Q ss_pred             ccCCCC-CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          15 IPFPKH-VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        15 ~~~p~~-~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ...|.. ++.+++++|.+||..+|.+|++.     .+++.||||+.
T Consensus       222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~ll~~~~~~~  262 (265)
T cd06605         222 PRLPSGKFSPDFQDFVNLCLIKDPRERPSY-----KELLEHPFIKK  262 (265)
T ss_pred             CCCChhhcCHHHHHHHHHHcCCCchhCcCH-----HHHhhCchhhc
Confidence            344444 88999999999999999999998     99999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=97.49  E-value=7e-05  Score=57.09  Aligned_cols=34  Identities=18%  Similarity=0.305  Sum_probs=31.4

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+.++++||.+||..||.+|+++     .+++.||||..
T Consensus       287 ~~~~~~~li~~mL~~dP~~R~t~-----~e~l~hp~~~~  320 (359)
T cd07876         287 KTSQARDLLSKMLVIDPDKRISV-----DEALRHPYITV  320 (359)
T ss_pred             cchhHHHHHHHHhccCcccCCCH-----HHHhcCchhhh
Confidence            46789999999999999999998     99999999973

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=97.48  E-value=6.5e-05  Score=55.09  Aligned_cols=42  Identities=10%  Similarity=0.259  Sum_probs=37.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR   66 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~   66 (126)
                      .++.++.+||.+||..+|.+|++.     ++|+.||||+...|....
T Consensus       238 ~~~~~l~~li~~~l~~~p~~Rpt~-----~~i~~~~~~~~~~~~~~~  279 (288)
T cd06616         238 EFSPSFVNFINLCLIKDESKRPKY-----KELLEHPFIKDYEERNVD  279 (288)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCH-----HHHhcChhhhchhhcchh
Confidence            478899999999999999999998     999999999987765443

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0660|consensus

Probab=97.48  E-value=7.1e-05  Score=57.53  Aligned_cols=37  Identities=14%  Similarity=0.260  Sum_probs=34.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +..++.|.||+.+||..||.+|+++     ++.+.|||+...
T Consensus       280 p~a~p~AidLlekmL~fdP~kRita-----~eAL~hPYl~~~  316 (359)
T KOG0660|consen  280 PNANPLAIDLLEKMLVFDPKKRITA-----EEALAHPYLAPY  316 (359)
T ss_pred             CCCCHHHHHHHHHHhccCccccCCH-----HHHhcChhhhhh
Confidence            4789999999999999999999998     999999999843

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=97.47  E-value=0.00015  Score=52.25  Aligned_cols=38  Identities=16%  Similarity=0.404  Sum_probs=34.1

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ...|..++.++.++|.+||..+|.+|++.     .+|..||||
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~  260 (260)
T cd08222         223 PSLPETYSRQLNSIMQSMLNKDPSLRPSA-----AEILRNPFI  260 (260)
T ss_pred             CCCcchhcHHHHHHHHHHhcCChhhCcCH-----HHHhhCCCC
Confidence            34556788999999999999999999998     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=97.47  E-value=9.3e-05  Score=54.99  Aligned_cols=32  Identities=16%  Similarity=0.261  Sum_probs=29.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+..+++||.+||+.||.+|+++     .+++.||||
T Consensus       286 ~~~~~~~ll~~~l~~dP~~R~t~-----~e~l~hp~f  317 (317)
T cd07867         286 PDSKVFLLLQKLLTMDPTKRITS-----EQALQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccccCH-----HHHhcCCCC
Confidence            46779999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=97.47  E-value=7.8e-05  Score=56.54  Aligned_cols=40  Identities=18%  Similarity=0.294  Sum_probs=35.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..+.++++||.+||+.||.+|++.     .+++.||||..+....
T Consensus       268 ~~~~~~~~li~~~l~~dP~~R~~~-----~e~l~h~~f~~~~~~~  307 (342)
T cd07879         268 KASPQAVDLLEKMLELDVDKRLTA-----TEALEHPYFDSFRDAD  307 (342)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCH-----HHHhcCcchhhccccc
Confidence            467889999999999999999998     9999999999876533

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=97.47  E-value=9.7e-05  Score=56.02  Aligned_cols=37  Identities=16%  Similarity=0.292  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++.++++||.+||+.||.+|+++     .+|+.|+||+.+
T Consensus       270 ~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~h~~~~~~  306 (342)
T cd07854         270 PGVNPEALDFLEQILTFNPMDRLTA-----EEALMHPYMSCY  306 (342)
T ss_pred             cCCCHHHHHHHHHHhCCCchhccCH-----HHHhCCCccccc
Confidence            3578999999999999999999988     999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0578|consensus

Probab=97.45  E-value=0.00011  Score=59.17  Aligned_cols=47  Identities=13%  Similarity=0.265  Sum_probs=39.9

Q ss_pred             HHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           7 IINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         7 I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      |.++|.-.++.|..+|+..++||.+||++|+.+|.++     .++++||||+
T Consensus       481 Ia~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA-----~eLL~HpFl~  527 (550)
T KOG0578|consen  481 IATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASA-----KELLEHPFLK  527 (550)
T ss_pred             HhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCH-----HHHhcChhhh
Confidence            3324533566778999999999999999999999988     9999999995

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=97.45  E-value=7.7e-05  Score=56.09  Aligned_cols=37  Identities=11%  Similarity=0.288  Sum_probs=33.7

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      .+++++++||.+||+.||.+|+++     .++..||||+.+.
T Consensus       278 ~~~~~~~~li~~~l~~dP~~Rpt~-----~ell~~p~f~~~~  314 (327)
T cd08227         278 TFSPHFHHFVEQCLQRNPDARPSA-----STLLNHSFFKQIK  314 (327)
T ss_pred             ccCHHHHHHHHHHHhhCchhcCCH-----HHHhcChhhhhcc
Confidence            467899999999999999999998     9999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PF00433 Pkinase_C: Protein kinase C terminal domain; InterPro: IPR017892 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.44  E-value=4e-05  Score=42.58  Aligned_cols=36  Identities=36%  Similarity=0.602  Sum_probs=24.7

Q ss_pred             CCCCCCCCCCCC-CCCCCCCCCCC---------CCCCCCCCccCCC
Q psy3183          78 IKGPTDTSNFDR-YSAENDIKGPT---------DTSNFDRYSAEND  113 (126)
Q Consensus        78 ~~~~~d~~~fd~-~~~e~~~~~~~---------~~~~f~~f~~~~~  113 (126)
                      +++..|++|||. |+.+.+..++.         .+.+|.||||.+.
T Consensus         2 v~~~~DtsnFD~eFt~~~~~~t~~~~~~~~~~~~~~~F~GFTy~~~   47 (48)
T PF00433_consen    2 VKSETDTSNFDPEFTEEPPVDTPPSDPSPLSSSMQENFQGFTYVNP   47 (48)
T ss_dssp             -SSTT-GTTSCHHHHTSSSSS--S--HHHHCTSSGGGGTT-CEETC
T ss_pred             CCchhhhhhcCcccccCCCCCCCcccCCcccccccCcCCCCeecCC
Confidence            567899999998 98888776653         2557999999864

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain is found in a large variety of protein kinases with different functions and dependencies. Protein kinase C, for example, is a calcium-activated, phospholipid-dependent serine- and threonine-specific enzyme. It is activated by diacylglycerol which, in turn, phosphorylates a range of cellular proteins. This domain is most often found associated with IPR000719 from INTERPRO.; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3E8D_A 1MRV_A 3E88_A 1GZO_A 1GZK_A 2JDO_A 2JDR_A 1MRY_A 1GZN_A 1O6L_A ....

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=97.41  E-value=8.7e-05  Score=56.35  Aligned_cols=37  Identities=14%  Similarity=0.291  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++.++.++|.+||..||.+|+++     .+++.||||+..
T Consensus       268 ~~~~~~~~~li~~~l~~dP~~R~t~-----~~~l~~~~~~~~  304 (343)
T cd07880         268 PNANPLAVNVLEKMLVLDAESRITA-----AEALAHPYFEEF  304 (343)
T ss_pred             cCCChHHHHHHHHHcCCChhhCCCH-----HHHhcCccHhhh
Confidence            4678899999999999999999998     999999999854

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.39  E-value=0.00011  Score=60.09  Aligned_cols=36  Identities=14%  Similarity=0.162  Sum_probs=32.5

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      ..+.+||.+||+.||.+|+++     .++++||||.+..+.
T Consensus       424 ~~~~dLi~~mL~~dP~kR~ta-----~e~L~Hpff~~~~~~  459 (566)
T PLN03225        424 GAGWELLKSMMRFKGRQRISA-----KAALAHPYFDREGLL  459 (566)
T ss_pred             hHHHHHHHHHccCCcccCCCH-----HHHhCCcCcCCCCcc
Confidence            346699999999999999998     999999999988775

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=97.39  E-value=0.00012  Score=53.84  Aligned_cols=34  Identities=18%  Similarity=0.406  Sum_probs=31.8

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .++.++++||.+||..+|.+|++.     .+|+.||||+
T Consensus       262 ~~~~~~~~~i~~~l~~~P~~R~~~-----~eil~~~~~~  295 (295)
T cd07837         262 DLSPEGLDLLQKMLRYDPAKRISA-----KAALTHPYFD  295 (295)
T ss_pred             ccCHHHHHHHHHHccCChhhcCCH-----HHHhcCCCcC
Confidence            478999999999999999999988     9999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=97.38  E-value=0.00012  Score=53.34  Aligned_cols=33  Identities=24%  Similarity=0.421  Sum_probs=31.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++++||.+||..+|.+|+++     .+++.||||
T Consensus       250 ~~~~~~~~li~~~l~~~P~~R~~~-----~~~l~~~~~  282 (282)
T cd07831         250 NASAEGLDLLKKLLAYDPDERITA-----KQALRHPYF  282 (282)
T ss_pred             cccHHHHHHHHHHhccCcccccCH-----HHHhhCCCC
Confidence            468999999999999999999998     999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=97.35  E-value=0.00016  Score=53.21  Aligned_cols=32  Identities=28%  Similarity=0.478  Sum_probs=30.7

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ++..+++||.+||..+|.+|+++     .+++.|+||
T Consensus       262 ~~~~~~~li~~~l~~~p~~R~t~-----~ell~~~~f  293 (293)
T cd07843         262 LSDNGFDLLNRLLTYDPAKRISA-----EDALKHPYF  293 (293)
T ss_pred             CChHHHHHHHHHhccCccccCCH-----HHHhcCCCC
Confidence            68999999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=97.35  E-value=0.00033  Score=50.44  Aligned_cols=39  Identities=18%  Similarity=0.364  Sum_probs=35.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ...+|..++..+++||.+||..+|.+|++.     .+++.|+||
T Consensus       225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~ll~~~~~  263 (263)
T cd06625         225 NPQLPSHVSPDARNFLRRTFVENAKKRPSA-----EELLRHFFV  263 (263)
T ss_pred             CCCCCccCCHHHHHHHHHHhhcCcccCCCH-----HHHhhCCCC
Confidence            445677889999999999999999999988     999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=97.35  E-value=0.0001  Score=55.66  Aligned_cols=37  Identities=16%  Similarity=0.317  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +.++.++++||.+||+.+|.+|++.     .+++.||||..+
T Consensus       261 ~~~~~~~~~li~~~l~~~P~~Rps~-----~ell~h~~~~~~  297 (337)
T cd07858         261 PHANPLAIDLLEKMLVFDPSKRITV-----EEALAHPYLASL  297 (337)
T ss_pred             ccCCHHHHHHHHHHhcCChhhccCH-----HHHHcCcchhhh
Confidence            3578999999999999999999988     999999999754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=97.34  E-value=0.00033  Score=50.29  Aligned_cols=37  Identities=22%  Similarity=0.433  Sum_probs=33.9

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..|..++.++.+||.+||..+|.+|+++     .+|+.||||
T Consensus       221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~~l~~~~~  257 (257)
T cd08223         221 PMPKDYSPELGELIATMLSKRPEKRPSV-----KSILRQPYI  257 (257)
T ss_pred             CCccccCHHHHHHHHHHhccCcccCCCH-----HHHhcCCCC
Confidence            4556789999999999999999999998     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=97.34  E-value=0.00014  Score=58.49  Aligned_cols=59  Identities=14%  Similarity=0.062  Sum_probs=43.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCC-------CCCCcccCCCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT-------LTPPIIPVIKGPTDT   84 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~-------~~ppf~P~~~~~~d~   84 (126)
                      ++.+..++|.+||+.||.+|+++     .+++.||||.......+....       ...|+.|.+....|+
T Consensus       426 ~~~~~~~li~kmL~~DP~~Rpsa-----~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (501)
T PHA03210        426 LPADFEYPLVKMLTFDWHLRPGA-----AELLALPLFSAEEEEEILFIHGLKSGAAHFKPIKPACRIESDT  491 (501)
T ss_pred             CChHHHHHHHHHhccCcccCcCH-----HHHhhChhhhcCCchHHHHHHhhhccccccccCCchheecccc
Confidence            56778899999999999999998     999999999987766543321       124566665544444

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=97.31  E-value=0.00015  Score=55.16  Aligned_cols=33  Identities=18%  Similarity=0.351  Sum_probs=30.9

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+.++++||.+||..||.+|+++     .+|+.||||.
T Consensus       283 ~~~~~~~li~~mL~~dP~~Rps~-----~ell~hp~~~  315 (355)
T cd07874         283 KASQARDLLSKMLVIDPAKRISV-----DEALQHPYIN  315 (355)
T ss_pred             cchHHHHHHHHHhcCCchhcCCH-----HHHhcCcchh
Confidence            46789999999999999999998     9999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PHA03211 serine/threonine kinase US3; Provisional

Probab=97.31  E-value=0.00012  Score=58.42  Aligned_cols=35  Identities=14%  Similarity=0.123  Sum_probs=31.8

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++.++++||.+||+.||.+|+++     .+++.||||+.
T Consensus       426 ~~~~~~~dli~~mL~~DP~~RPsa-----~elL~hp~f~~  460 (461)
T PHA03211        426 KLDLDVEYLVCRALTFDGARRPSA-----AELLRLPLFQS  460 (461)
T ss_pred             cccchHHHHHHHHcccChhhCcCH-----HHHhhCcccCC
Confidence            356789999999999999999998     99999999974

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=97.31  E-value=0.00034  Score=50.14  Aligned_cols=36  Identities=31%  Similarity=0.449  Sum_probs=32.9

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+..++.+++++|.+||..+|.+|+++     .+|+.||||
T Consensus       222 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~-----~~ll~~~~~  257 (257)
T cd08225         222 ISPNFSRDLRSLISQLFKVSPRDRPSI-----TSILKRPFL  257 (257)
T ss_pred             CCCCCCHHHHHHHHHHhccChhhCcCH-----HHHhhCCCC
Confidence            445678999999999999999999998     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=97.31  E-value=0.00024  Score=51.03  Aligned_cols=43  Identities=16%  Similarity=0.332  Sum_probs=36.8

Q ss_pred             cccCCCC-CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          14 KIPFPKH-VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        14 ~~~~p~~-~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ....+.. ++..++++|.+||..+|.+|++.     .+|+.|||++.++
T Consensus       220 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~-----~~ll~~~~~~~~~  263 (264)
T cd06623         220 PPSLPAEEFSPEFRDFISACLQKDPKKRPSA-----AELLQHPFIKKAD  263 (264)
T ss_pred             CCCCCcccCCHHHHHHHHHHccCChhhCCCH-----HHHHhCHHHHhcc
Confidence            3445555 88999999999999999999998     9999999998653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=97.31  E-value=0.00027  Score=51.76  Aligned_cols=41  Identities=20%  Similarity=0.417  Sum_probs=36.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ...+|..++.++++||.+||..+|.+|++.     .+++.||||..
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~l~~~~~~~~  267 (286)
T cd06622         227 PPTLPSGYSDDAQDFVAKCLNKIPNRRPTY-----AQLLEHPWLVK  267 (286)
T ss_pred             CCCCCcccCHHHHHHHHHHcccCcccCCCH-----HHHhcChhhhh
Confidence            345667789999999999999999999998     99999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=97.31  E-value=0.00018  Score=52.16  Aligned_cols=38  Identities=16%  Similarity=0.322  Sum_probs=34.7

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..+|..++.++++||.+||..+|.+|+++     .+|..||||
T Consensus       231 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~ll~~~~~  268 (268)
T cd06624         231 PEIPESLSAEAKNFILRCFEPDPDKRASA-----HDLLQDPFL  268 (268)
T ss_pred             CCCCcccCHHHHHHHHHHcCCCchhCCCH-----HHHHhCCCC
Confidence            45677889999999999999999999988     999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=97.30  E-value=0.00016  Score=54.60  Aligned_cols=36  Identities=14%  Similarity=0.271  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++.+++||.+||..||.+|+++     .+++.||||...
T Consensus       269 ~~~~~~~~li~~mL~~dp~~R~s~-----~ell~hp~~~~~  304 (343)
T cd07878         269 GANPLAIDLLEKMLVLDSDKRISA-----SEALAHPYFSQY  304 (343)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCcchhcc
Confidence            356789999999999999999998     999999999753

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0579|consensus

Probab=97.29  E-value=0.00031  Score=58.38  Aligned_cols=56  Identities=18%  Similarity=0.218  Sum_probs=44.6

Q ss_pred             hHHHHHHhcCCCccc--CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183           2 QTYNMIINVGIDKIP--FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~--~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      .+.-+|. +. +++.  -|..+|...+||+++||.+||..|+..     .+|+.|||+.+++-..
T Consensus       242 RVllKia-KS-ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~a-----aqll~Hpfv~~~~SnK  299 (1187)
T KOG0579|consen  242 RVLLKIA-KS-EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPA-----AQLLKHPFVQNAPSNK  299 (1187)
T ss_pred             HHHHHHh-hc-CCCcccCcchhhhHHHHHHHHHHhcCCccCCCH-----HHHhhCcccccCCcch
Confidence            3444555 32 3333  367899999999999999999999998     9999999999887654

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=97.29  E-value=0.00019  Score=52.37  Aligned_cols=36  Identities=31%  Similarity=0.587  Sum_probs=32.7

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +|..++.++++||++||..+|.+|+++     .+|+.|+||
T Consensus       253 ~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~f  288 (288)
T cd07833         253 YPGKVSSPALDFLKACLRMDPKERLTC-----DELLQHPYF  288 (288)
T ss_pred             cCCccchHHHHHHHHHhccCchhcccH-----HHHhcCCCC
Confidence            445568999999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=97.29  E-value=0.0001  Score=54.26  Aligned_cols=38  Identities=13%  Similarity=0.355  Sum_probs=34.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      +.++.+++++|.+||..+|.+|++.     .+++.|+||.+++
T Consensus       254 ~~~~~~~~~~i~~~l~~~P~~Rps~-----~~~l~~~~~~~~~  291 (294)
T PLN00009        254 PTLEPAGVDLLSKMLRLDPSKRITA-----RAALEHEYFKDLG  291 (294)
T ss_pred             cCCChHHHHHHHHHccCChhhCcCH-----HHHhcCchHhHHh
Confidence            3578899999999999999999988     9999999998654

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=97.29  E-value=0.00016  Score=53.33  Aligned_cols=32  Identities=28%  Similarity=0.352  Sum_probs=29.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+..+++||.+||..||.+|+++     .+++.||||
T Consensus       279 ~~~~~~dli~~~l~~~P~~R~t~-----~e~l~h~~f  310 (310)
T cd07865         279 KDPHALDLIDKLLVLDPAKRIDA-----DTALNHDFF  310 (310)
T ss_pred             CCHHHHHHHHHHhcCChhhccCH-----HHHhcCCCC
Confidence            36788999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PHA03212 serine/threonine kinase US3; Provisional

Probab=97.29  E-value=0.00012  Score=57.05  Aligned_cols=34  Identities=15%  Similarity=0.057  Sum_probs=31.3

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++.++.+||.+||..||.+|+++     .+++.||||+.
T Consensus       348 ~~~~l~~Li~~mL~~dP~~Rpta-----~elL~hp~f~~  381 (391)
T PHA03212        348 LPIDLEYLICKMLAFDAHHRPSA-----EALLDFAAFQD  381 (391)
T ss_pred             hhhhHHHHHHHHhcCChhhCCCH-----HHHhcChhhcc
Confidence            46689999999999999999998     99999999975

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=97.29  E-value=0.00019  Score=52.37  Aligned_cols=34  Identities=18%  Similarity=0.355  Sum_probs=31.7

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..++.++.++|.+||..+|.+|++.     .+|+.|+||
T Consensus       250 ~~~~~~~~~li~~~l~~~P~~Rpt~-----~~il~~~~~  283 (283)
T cd07835         250 PNLDEDGLDLLSKMLVYDPAKRISA-----KAALQHPYF  283 (283)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCH-----HHHhcCCCC
Confidence            4577899999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=97.29  E-value=0.00019  Score=52.29  Aligned_cols=34  Identities=26%  Similarity=0.465  Sum_probs=31.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..+..+++||.+||..+|.+|+++     .+++.||||.
T Consensus       253 ~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~h~~~~  286 (286)
T cd07832         253 DASPEALDLLKGLLVYDPSKRLSA-----AEALRHPYFT  286 (286)
T ss_pred             CccHHHHHHHHHHhccChhhCCCH-----HHHhhCcCcC
Confidence            457899999999999999999998     9999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=97.28  E-value=0.0002  Score=53.09  Aligned_cols=33  Identities=18%  Similarity=0.373  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..+.++.++|.+||..||++|+++     .+|..||||
T Consensus       284 ~~~~~~~~~i~~~l~~~P~~Rps~-----~eil~~~~f  316 (316)
T cd07842         284 KPDSQGFDLLRKLLEYDPTKRITA-----EEALEHPYF  316 (316)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCH-----HHHhcCCCC
Confidence            567889999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=97.27  E-value=0.00042  Score=50.10  Aligned_cols=38  Identities=13%  Similarity=0.275  Sum_probs=34.6

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..+|..++..++++|.+||+.+|.+|++.     .+|+.|+||
T Consensus       230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~  267 (267)
T cd06628         230 PEIPSNISSEAIDFLEKTFEIDHNKRPTA-----AELLKHPFL  267 (267)
T ss_pred             CcCCcccCHHHHHHHHHHccCCchhCcCH-----HHHhhCCCC
Confidence            45667789999999999999999999988     999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=97.27  E-value=0.00038  Score=50.24  Aligned_cols=39  Identities=18%  Similarity=0.300  Sum_probs=35.1

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..+|..++.+++++|.+||..+|.+|+++     .+++.||||+
T Consensus       230 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~ll~~~~~~  268 (268)
T cd06630         230 PSIPEHLSPGLRDVTLRCLELQPEDRPPS-----RELLKHPVFR  268 (268)
T ss_pred             CCCchhhCHHHHHHHHHHcCCCcccCcCH-----HHHhcCcccC
Confidence            44566789999999999999999999998     9999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=97.26  E-value=9.8e-05  Score=54.87  Aligned_cols=36  Identities=11%  Similarity=0.290  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++.++.+||.+||..||.+|+++     .+++.||||+.+
T Consensus       266 ~~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~p~~~~~  301 (314)
T cd08216         266 TFSEHFHQFVELCLQRDPESRPSA-----SQLLNHSFFKQC  301 (314)
T ss_pred             HHHHHHHHHHHHHhhcCCCcCcCH-----HHHhcCchHhhh
Confidence            456789999999999999999998     999999999855

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=97.25  E-value=0.0003  Score=53.22  Aligned_cols=36  Identities=17%  Similarity=0.221  Sum_probs=33.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++.++++||.+||+.||.+|++.     .+++.|+||+..
T Consensus       270 ~~~~~~~~li~~~L~~~P~~Rpt~-----~ell~h~~~~~~  305 (333)
T cd06650         270 VFGAEFQDFVNKCLIKNPAERADL-----KQLMVHAFIKRS  305 (333)
T ss_pred             CcCHHHHHHHHHhccCCcccCcCH-----HHHhhCHHHhcC
Confidence            478899999999999999999998     999999999753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=97.24  E-value=0.0003  Score=50.87  Aligned_cols=37  Identities=14%  Similarity=0.337  Sum_probs=33.8

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..|..++.+++++|.+||..+|.+|+++     .+++.||||
T Consensus       229 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~-----~~~l~~~~~  265 (265)
T cd06631         229 RLPDSFSAAAIDFVTSCLTRDQHERPSA-----LQLLRHDFL  265 (265)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCcccCCCH-----HHHhcCCCC
Confidence            4556789999999999999999999988     999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=97.23  E-value=0.00023  Score=54.04  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++..+.+||.+||..+|.+|+++     .+|+.||||..
T Consensus       269 ~~s~~l~dli~~~l~~~P~~Rpt~-----~ell~h~~~~~  303 (343)
T cd07851         269 GANPLAIDLLEKMLVLDPDKRITA-----AEALAHPYLAE  303 (343)
T ss_pred             cCCHHHHHHHHHhCCCChhhCCCH-----HHHhcCCCccc
Confidence            468999999999999999999998     99999999984

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=97.22  E-value=0.00028  Score=51.53  Aligned_cols=42  Identities=14%  Similarity=0.248  Sum_probs=36.9

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      .|..++.++.+||.+||..+|.+|++.     .+|+.|+||.+....
T Consensus       230 ~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~~~~~~~~  271 (280)
T cd06611         230 QPSKWSSSFNDFLKSCLVKDPDDRPTA-----AELLKHPFVSDQSDN  271 (280)
T ss_pred             CcccCCHHHHHHHHHHhccChhhCcCH-----HHHhcChhhcccchh
Confidence            355688999999999999999999998     999999999876543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=97.22  E-value=0.00022  Score=51.27  Aligned_cols=33  Identities=21%  Similarity=0.444  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++...++||.+||..+|.+|+++     .+|+.||||
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~-----~~ll~~p~~  267 (267)
T cd06610         235 KYSKSFRKMISLCLQKDPSKRPTA-----EELLKHKFF  267 (267)
T ss_pred             cccHHHHHHHHHHcCCChhhCcCH-----HHHhhCCCC
Confidence            568899999999999999999988     999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=97.22  E-value=0.00026  Score=50.73  Aligned_cols=35  Identities=17%  Similarity=0.374  Sum_probs=31.9

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +..++.++.++|.+||..+|.+|+++     .+|+.||||
T Consensus       222 ~~~~~~~~~~~i~~~l~~~P~~Rps~-----~~il~~~~~  256 (256)
T cd06612         222 PEKWSPEFNDFVKKCLVKDPEERPSA-----IQLLQHPFI  256 (256)
T ss_pred             hhhcCHHHHHHHHHHHhcChhhCcCH-----HHHhcCCCC
Confidence            34577899999999999999999998     999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=97.21  E-value=0.00026  Score=51.62  Aligned_cols=33  Identities=27%  Similarity=0.544  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++..+.+||.+||..+|.+|+++     .+++.||||
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rp~~-----~eil~~~~f  286 (286)
T cd07847         254 NISSPALSFLKGCLQMDPTERLSC-----EELLEHPYF  286 (286)
T ss_pred             cCCHHHHHHHHHHhcCCccccCCH-----HHHhcCCCC
Confidence            468899999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=97.21  E-value=0.00049  Score=49.54  Aligned_cols=41  Identities=29%  Similarity=0.580  Sum_probs=36.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ...+|..++.++.++|.+||..+|.+|++.  . ..+++.||||
T Consensus       218 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~--~-~~~l~~~~~~  258 (258)
T cd05578         218 DVLYPATWSTEAIDAINKLLERDPQKRLGD--N-LKDLKNHPYF  258 (258)
T ss_pred             cccCcccCcHHHHHHHHHHccCChhHcCCc--c-HHHHhcCCCC
Confidence            456777889999999999999999999986  2 5899999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=97.20  E-value=0.00029  Score=51.80  Aligned_cols=36  Identities=14%  Similarity=0.232  Sum_probs=32.6

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      |..++..+++||.+||..+|.+|++.     .+|+.||||+
T Consensus       256 ~~~~~~~l~~li~~~l~~~p~~Rps~-----~~il~~~~~~  291 (291)
T cd06639         256 PEKWCRSFNHFISQCLIKDFEARPSV-----THLLEHPFIK  291 (291)
T ss_pred             ccccCHHHHHHHHHHhhcChhhCcCH-----HHHhcCcccC
Confidence            44577889999999999999999998     9999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=97.19  E-value=0.00062  Score=48.45  Aligned_cols=37  Identities=22%  Similarity=0.490  Sum_probs=33.7

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..|..++..++++|.+||..+|.+|++.     .+++.||||
T Consensus       222 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~-----~~ll~~~~~  258 (258)
T cd08215         222 PIPSQYSSELRNLVSSLLQKDPEERPSI-----AQILQSPFI  258 (258)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHhcCCCC
Confidence            4556788999999999999999999998     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=97.18  E-value=0.00059  Score=48.84  Aligned_cols=37  Identities=14%  Similarity=0.245  Sum_probs=33.8

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+|..++..+.++|.+||..+|.+|++.     .+|+.|||+
T Consensus       229 ~~~~~~~~~~~~l~~~~l~~~p~~Rp~~-----~~il~~~~~  265 (265)
T cd08217         229 RIPYRYSSELNEVIKSMLNVDPDKRPST-----EELLQLPLI  265 (265)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCCCH-----HHHhhCCCC
Confidence            4567788999999999999999999998     999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=97.18  E-value=0.00029  Score=51.05  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=31.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..++.++++||.+||..+|.+|++.     .+|+.||||
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~~~~~  272 (272)
T cd06637         239 KKWSKKFQSFIESCLVKNHSQRPTT-----EQLMKHPFI  272 (272)
T ss_pred             CCcCHHHHHHHHHHcCCChhhCCCH-----HHHhhCCCC
Confidence            3578899999999999999999998     999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=97.17  E-value=0.00052  Score=49.13  Aligned_cols=38  Identities=16%  Similarity=0.243  Sum_probs=34.4

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..+|..++.+++++|.+||..+|.+|++.     .++..||||
T Consensus       219 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-----~~ll~~p~~  256 (256)
T cd08220         219 APISDRYSPDLRQLILSMLNLDPSKRPQL-----SQIMAQPIC  256 (256)
T ss_pred             CCCCCCcCHHHHHHHHHHccCChhhCCCH-----HHHhhCCCC
Confidence            34566789999999999999999999998     999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=97.16  E-value=0.00024  Score=51.82  Aligned_cols=33  Identities=27%  Similarity=0.509  Sum_probs=30.9

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++..++++|.+||+.+|.+|++.     .+|+.||||
T Consensus       252 ~~~~~~~~~i~~~l~~~p~~R~~~-----~~~l~~~~f  284 (284)
T cd07836         252 HADPLGIDLLHRLLQLNPELRISA-----HDALQHPWF  284 (284)
T ss_pred             hcCcHHHHHHHHHhcCCcccCCCH-----HHHhcCCCC
Confidence            467899999999999999999988     999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=97.16  E-value=0.00029  Score=51.14  Aligned_cols=32  Identities=22%  Similarity=0.440  Sum_probs=30.3

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ++..+.++|.+||..+|.+|++.     .++..||||
T Consensus       251 ~~~~~~~~i~~~l~~~P~~Rp~~-----~~~l~~p~~  282 (282)
T cd07829         251 LDPEGIDLLSKMLQYNPAKRISA-----KEALKHPYF  282 (282)
T ss_pred             ccHHHHHHHHHhhccCcccCCCH-----HHHhhCcCC
Confidence            47899999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=97.14  E-value=0.00054  Score=49.83  Aligned_cols=41  Identities=15%  Similarity=0.313  Sum_probs=35.2

Q ss_pred             cCCCC-CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          16 PFPKH-VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        16 ~~p~~-~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ..+.. ++.++.++|.+||..+|.+|++.     .+|+.|+||.+..
T Consensus       217 ~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~-----~~il~~~~~~~~~  258 (274)
T cd06609         217 SLEGNKFSKPFKDFVSLCLNKDPKERPSA-----KELLKHKFIKKAK  258 (274)
T ss_pred             CCcccccCHHHHHHHHHHhhCChhhCcCH-----HHHhhChhhcCCC
Confidence            33444 78899999999999999999988     9999999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=97.13  E-value=0.00035  Score=51.47  Aligned_cols=36  Identities=19%  Similarity=0.304  Sum_probs=32.8

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..+.++++||.+||..+|.+|+++     .+|+.|+||++.
T Consensus       253 ~~~~~~~~li~~~l~~~P~~R~s~-----~e~l~~~~~~~~  288 (298)
T cd07841         253 AASDDALDLLQRLLTLNPNKRITA-----RQALEHPYFSND  288 (298)
T ss_pred             cccHHHHHHHHHHhcCCcccCcCH-----HHHhhCccccCC
Confidence            457899999999999999999988     999999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=97.13  E-value=0.00027  Score=53.36  Aligned_cols=36  Identities=14%  Similarity=0.327  Sum_probs=32.7

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++.++.+||.+||..+|.+|+++     .+++.||||+.+
T Consensus       263 ~~~~~~~~li~~~l~~dP~~Rpt~-----~e~l~hp~~~~~  298 (336)
T cd07849         263 NADPKALDLLDKMLTFNPHKRITV-----EEALAHPYLEQY  298 (336)
T ss_pred             ccCcHHHHHHHHHcCCChhhCcCH-----HHHhcCcccccc
Confidence            467889999999999999999998     999999999843

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=97.12  E-value=0.00025  Score=53.96  Aligned_cols=33  Identities=18%  Similarity=0.347  Sum_probs=30.7

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+..+++||.+||+.||.+|+++     .+++.||||+
T Consensus       283 ~~~~~~~li~~~L~~dP~~R~t~-----~eiL~~~~~~  315 (353)
T cd07850         283 KASQARDLLSKMLVIDPEKRISV-----DDALQHPYIN  315 (353)
T ss_pred             chhHHHHHHHHHcCCChhhCcCH-----HHHhcChhHh
Confidence            46679999999999999999998     9999999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=97.12  E-value=0.00035  Score=51.01  Aligned_cols=34  Identities=18%  Similarity=0.331  Sum_probs=31.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +.++..+++||.+||..+|.+|+++     .+|+.|+||
T Consensus       253 ~~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~~~~~  286 (286)
T cd07846         253 PKLSGLVLDLAKQCLRIDPDDRPSS-----SQLLHHEFF  286 (286)
T ss_pred             CCcCHHHHHHHHHHhcCCcccchhH-----HHHhcCCCC
Confidence            3578899999999999999999998     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=97.12  E-value=0.00047  Score=48.96  Aligned_cols=38  Identities=16%  Similarity=0.430  Sum_probs=34.6

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..+|..++...++||.+||..+|.+|++.     .++..||||
T Consensus       223 ~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~-----~~ll~~~~~  260 (260)
T cd06606         223 PEIPEHLSEEAKDFLRKCLRRDPKKRPTA-----DELLQHPFL  260 (260)
T ss_pred             cCCCcccCHHHHHHHHHhCcCChhhCCCH-----HHHhhCCCC
Confidence            45667789999999999999999999988     999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=97.11  E-value=9.6e-05  Score=55.60  Aligned_cols=35  Identities=17%  Similarity=0.349  Sum_probs=32.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++..+++||++||+.||.+|+++     .++++|+||.+
T Consensus       279 ~~~~~~~~li~~~l~~dP~~Rpta-----~e~l~~~~~~~  313 (328)
T cd08226         279 TFSPAFQNLVELCLQQDPEKRPSA-----SSLLSHAFFKQ  313 (328)
T ss_pred             hhhHHHHHHHHHHccCCcccCCCH-----HHHhhCHHHHH
Confidence            467889999999999999999998     99999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=97.11  E-value=0.00087  Score=49.07  Aligned_cols=37  Identities=14%  Similarity=0.312  Sum_probs=33.7

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ..+.++++||.+||..+|.+|++.     .+++.||||...+
T Consensus       224 ~~~~~~~~li~~~l~~~P~~Rp~~-----~eil~~~~~~~~~  260 (279)
T cd06619         224 QFSEKFVHFITQCMRKQPKERPAP-----ENLMDHPFIVQYN  260 (279)
T ss_pred             cCCHHHHHHHHHHhhCChhhCCCH-----HHHhcCccccccc
Confidence            478899999999999999999988     9999999998654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=97.10  E-value=0.00077  Score=48.02  Aligned_cols=39  Identities=18%  Similarity=0.435  Sum_probs=35.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ...+|..++...+++|.+||..+|.+|++.     .+++.|+||
T Consensus       216 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~~l~~~~~  254 (254)
T cd06627         216 HPPLPEGISPELKDFLMQCFQKDPNLRPTA-----KQLLKHPWI  254 (254)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCChhhCcCH-----HHHhcCCCC
Confidence            345667789999999999999999999998     999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=97.09  E-value=0.00039  Score=50.88  Aligned_cols=39  Identities=10%  Similarity=0.173  Sum_probs=34.8

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..|..++.++++||.+||..+|.+|++.     .+|+.||||..
T Consensus       229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~  267 (282)
T cd06643         229 AQPSRWSSEFKDFLKKCLEKNVDARWTT-----TQLLQHPFVTV  267 (282)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcCH-----HHHhcCCCEec
Confidence            3455688999999999999999999998     99999999973

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=97.09  E-value=0.00025  Score=53.10  Aligned_cols=35  Identities=14%  Similarity=0.225  Sum_probs=32.6

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++.++.+||.+||..+|.+|++.     .+++.||||++
T Consensus       260 ~~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~~~~~~  294 (330)
T cd07834         260 GASPEAIDLLEKMLVFDPKKRITA-----DEALAHPYLAQ  294 (330)
T ss_pred             cCCHHHHHHHHHHccCChhhCCCH-----HHHHhCccHHh
Confidence            478899999999999999999998     99999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=97.08  E-value=0.00039  Score=51.27  Aligned_cols=33  Identities=24%  Similarity=0.375  Sum_probs=30.2

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++.+||.+||..+|.+|+++     .+++.||||
T Consensus       279 ~~~~~~~~~i~~~l~~~p~~R~t~-----~ell~~~~f  311 (311)
T cd07866         279 KLGPEGLDLLSKLLSLDPYKRLTA-----SDALEHPYF  311 (311)
T ss_pred             cCChhHHHHHHHHcccCcccCcCH-----HHHhcCCCC
Confidence            345789999999999999999998     999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=97.08  E-value=0.00034  Score=50.83  Aligned_cols=33  Identities=18%  Similarity=0.345  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++++||.+||..+|.+|++.     .+|..||||
T Consensus       251 ~~~~~~~~~i~~~l~~~P~~Rp~~-----~~ll~~~~~  283 (283)
T cd05118         251 NASPQALDLLSQMLHYDPHKRITA-----EQALAHPYF  283 (283)
T ss_pred             hhCHHHHHHHHHHhccCcccCcCH-----HHHhhCCCC
Confidence            468899999999999999999998     999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=97.08  E-value=0.00043  Score=52.19  Aligned_cols=36  Identities=17%  Similarity=0.297  Sum_probs=32.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +.++.+++++|++||+.+|.+|++.     .+++.||||..
T Consensus       264 ~~~~~~~~~li~~~l~~~P~~Rpt~-----~~~l~~~~~~~  299 (334)
T cd07855         264 PKASPEALDLLSQMLQFDPEERITV-----EQALQHPFLAQ  299 (334)
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCH-----HHHHhChhhhh
Confidence            3468999999999999999999998     99999999973

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=97.07  E-value=0.0004  Score=52.27  Aligned_cols=36  Identities=28%  Similarity=0.458  Sum_probs=32.7

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..+.++.+||.+||..+|.+|+++     .+++.|+||++.
T Consensus       284 ~~~~~~~~li~~~l~~~P~~R~s~-----~~~l~~~~~~~~  319 (335)
T PTZ00024        284 NASDDAIDLLQSLLKLNPLERISA-----KEALKHEYFKSD  319 (335)
T ss_pred             CCChHHHHHHHHHcCCCchhccCH-----HHHhcCcccCCC
Confidence            457889999999999999999998     999999999844

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=97.07  E-value=0.00041  Score=50.01  Aligned_cols=34  Identities=9%  Similarity=0.143  Sum_probs=31.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..++.++++||.+||..||.+|++.     .+|+.|||+
T Consensus       242 ~~~~~~~~~li~~~l~~dp~~Rpt~-----~~ll~~~~~  275 (275)
T cd06608         242 ENWSKKFNDFISECLIKNYEQRPFM-----EELLEHPFI  275 (275)
T ss_pred             hhcCHHHHHHHHHHhhcChhhCcCH-----HHHhcCCCC
Confidence            3467899999999999999999998     999999995

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=97.07  E-value=0.00027  Score=50.62  Aligned_cols=31  Identities=29%  Similarity=0.621  Sum_probs=29.5

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +..+.+||.+||..+|.+|+++     .++++||||
T Consensus       230 ~~~l~~li~~~l~~~p~~R~~~-----~~l~~~~~~  260 (260)
T PF00069_consen  230 SEELRDLIKKMLSKDPEQRPSA-----EELLKHPWF  260 (260)
T ss_dssp             HHHHHHHHHHHSSSSGGGSTTH-----HHHHTSGGG
T ss_pred             HHHHHHHHHHHccCChhHCcCH-----HHHhcCCCC
Confidence            4899999999999999999998     999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=97.03  E-value=0.00048  Score=50.32  Aligned_cols=33  Identities=12%  Similarity=0.137  Sum_probs=31.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++.+||.+||..||.+|++.     .+|+.||||
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rp~~-----~ell~~~~~  282 (282)
T cd06636         250 KWSKKFIDFIEGCLVKNYLSRPST-----EQLLKHPFI  282 (282)
T ss_pred             ccCHHHHHHHHHHhCCChhhCcCH-----HHHhcCCCC
Confidence            478899999999999999999998     999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=97.02  E-value=0.00079  Score=48.83  Aligned_cols=39  Identities=15%  Similarity=0.302  Sum_probs=32.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ...+|..++..+++||.. |..+|.+|++.     .+|+.||||+
T Consensus       227 ~~~~~~~~~~~~~~li~~-~~~~p~~Rp~~-----~eil~hp~~~  265 (266)
T cd06651         227 NPQLPSHISEHARDFLGC-IFVEARHRPSA-----EELLRHPFAQ  265 (266)
T ss_pred             CCCCchhcCHHHHHHHHH-hcCChhhCcCH-----HHHhcCcccc
Confidence            345667789999999954 44799999988     9999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=97.02  E-value=0.00041  Score=50.49  Aligned_cols=33  Identities=18%  Similarity=0.428  Sum_probs=30.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++..+.+||.+||..||.+|+++     .+++.||||
T Consensus       255 ~~~~~~~~li~~~l~~dp~~Rp~~-----~~il~~~~~  287 (287)
T cd07838         255 EICEEGLDLLKKMLTFNPHKRISA-----FEALQHPYF  287 (287)
T ss_pred             hhhHHHHHHHHHHhccCCccCCCH-----HHHhcCcCC
Confidence            356889999999999999999998     999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=97.01  E-value=0.00039  Score=51.83  Aligned_cols=35  Identities=20%  Similarity=0.390  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++.++++||.+||..+|.+|++.     .+|+.||||.+
T Consensus       258 ~~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~~~~~~  292 (308)
T cd06615         258 AFSDEFQDFVDKCLKKNPKERADL-----KELTKHPFIKR  292 (308)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCH-----HHHhcChhhhh
Confidence            378899999999999999999998     99999999975

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.01  E-value=0.00088  Score=54.28  Aligned_cols=41  Identities=20%  Similarity=0.232  Sum_probs=33.9

Q ss_pred             cccCC--CCCCHHHHHHHHHhhhcCc---CccCCCCCCChhhhccCCCCCC
Q psy3183          14 KIPFP--KHVTRTAQSLIKALCKESP---AERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        14 ~~~~p--~~~s~~a~dli~~lL~~dp---~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+.++  ..++..++|||.+||.++|   .+|+++     .+++.||||..
T Consensus       460 ~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa-----~eaL~Hp~f~~  505 (507)
T PLN03224        460 KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSV-----GQALSHRFFLP  505 (507)
T ss_pred             CCCcccccccChHHHHHHHHHhccCCCCcccCCCH-----HHHhCCCCcCC
Confidence            34444  4688999999999999876   689988     99999999963

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=96.98  E-value=0.0004  Score=50.61  Aligned_cols=39  Identities=18%  Similarity=0.265  Sum_probs=35.0

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ..++.++++||.+||..+|.+|++.     .+|+.|+||.....
T Consensus       231 ~~~~~~l~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~~  269 (283)
T cd06617         231 EKFSPEFQDFVNKCLKKNYKERPNY-----PELLQHPFFELHLS  269 (283)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCH-----HHHhcCchhhhccc
Confidence            3578999999999999999999998     99999999986543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=96.94  E-value=0.0005  Score=51.05  Aligned_cols=39  Identities=8%  Similarity=0.160  Sum_probs=35.0

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..|..++..+++||.+||..+|.+|++.     .+|+.|+||+.
T Consensus       236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~-----~~il~~~~~~~  274 (296)
T cd06655         236 QNPEKLSPIFRDFLNRCLEMDVEKRGSA-----KELLQHPFLKL  274 (296)
T ss_pred             CCcccCCHHHHHHHHHHhhcChhhCCCH-----HHHhhChHhhh
Confidence            3456788999999999999999999988     99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=96.93  E-value=0.00067  Score=50.33  Aligned_cols=38  Identities=8%  Similarity=0.164  Sum_probs=34.1

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .|..++..+++||.+||..+|.+|++.     .+|+.||||..
T Consensus       237 ~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~~~~  274 (297)
T cd06656         237 NPERLSAVFRDFLNRCLEMDVDRRGSA-----KELLQHPFLKL  274 (297)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCH-----HHHhcCchhcc
Confidence            445678899999999999999999998     99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=96.91  E-value=0.00066  Score=49.87  Aligned_cols=31  Identities=23%  Similarity=0.350  Sum_probs=29.3

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +.++.+||.+||..||.+|+++     .+++.||||
T Consensus       261 ~~~~~~ll~~~l~~dp~~R~t~-----~~~l~h~~~  291 (291)
T cd07870         261 PPKAEDLASQMLMMFPKDRISA-----QDALLHPYF  291 (291)
T ss_pred             ChHHHHHHHHHhCcCcccCcCH-----HHHhcCCCC
Confidence            5789999999999999999998     999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=96.91  E-value=0.00064  Score=49.32  Aligned_cols=33  Identities=15%  Similarity=0.295  Sum_probs=30.8

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++++||.+||..+|.+|++.     .+|+.|||+
T Consensus       240 ~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~~  272 (272)
T cd06629         240 NLSPVALDFLNACFTINPDNRPTA-----RELLQHPFI  272 (272)
T ss_pred             cCCHHHHHHHHHHhcCChhhCCCH-----HHHhhCCCC
Confidence            458999999999999999999987     999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=96.91  E-value=0.00086  Score=47.96  Aligned_cols=38  Identities=21%  Similarity=0.432  Sum_probs=34.1

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..+|..++.++++||.+||..+|.+|++.     .++..|||+
T Consensus       221 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~~l~~~~~  258 (258)
T cd06632         221 PPIPDHLSDEAKDFILKCLQRDPSLRPTA-----AELLEHPFV  258 (258)
T ss_pred             CCcCCCcCHHHHHHHHHHhhcCcccCcCH-----HHHhcCCCC
Confidence            34566789999999999999999999988     999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=96.86  E-value=0.0011  Score=47.63  Aligned_cols=39  Identities=15%  Similarity=0.394  Sum_probs=33.5

Q ss_pred             cccCCCCC--CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          14 KIPFPKHV--TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        14 ~~~~p~~~--s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ...+|...  +..+.+||.+||+.+|.+|++.     .+|+.|||+
T Consensus       224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~i~~~~~~  264 (264)
T cd06626         224 KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTA-----SELLQHPFV  264 (264)
T ss_pred             CCCCCcccccCHHHHHHHHHHccCCcccCCCH-----HHHhcCCCC
Confidence            34455544  8999999999999999999998     999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=96.86  E-value=0.00083  Score=49.27  Aligned_cols=30  Identities=20%  Similarity=0.399  Sum_probs=28.9

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++.++|.+||..+|.+|+++     .+++.|+||
T Consensus       262 ~~~~~li~~~L~~~p~~Rps~-----~e~l~~~~f  291 (291)
T cd07844         262 PHGEELALKFLQYEPKKRISA-----AEAMKHPYF  291 (291)
T ss_pred             hhHHHHHHHHhccCcccccCH-----HHHhcCCCC
Confidence            889999999999999999998     999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=96.85  E-value=0.00062  Score=50.06  Aligned_cols=35  Identities=20%  Similarity=0.366  Sum_probs=31.7

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +++.+++||.+||..+|.+|++.     .+|+.|+||++.
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rpt~-----~eil~~~~~~~~  272 (287)
T cd06621         238 WSEEFKDFIKQCLEKDPTRRPTP-----WDMLEHPWIKAQ  272 (287)
T ss_pred             hHHHHHHHHHHHcCCCcccCCCH-----HHHHhCcccccc
Confidence            46789999999999999999998     999999999754

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=96.84  E-value=0.00092  Score=49.22  Aligned_cols=33  Identities=15%  Similarity=0.343  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++..+++||.+||..+|.+|++.     .+|+.||||
T Consensus       270 ~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~~~~~  302 (302)
T cd07864         270 FIPTPALDLLDHMLTLDPSKRCTA-----EEALNSPWL  302 (302)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCH-----HHHhcCCCC
Confidence            468999999999999999999998     999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0586|consensus

Probab=96.82  E-value=0.00043  Score=56.45  Aligned_cols=40  Identities=20%  Similarity=0.343  Sum_probs=38.2

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+.+|..+|.+|++||+++|..+|.+|..+     ++|+.|.|..
T Consensus       271 k~rIp~~ms~dce~lLrk~lvl~Pskr~~~-----dqim~~~W~n  310 (596)
T KOG0586|consen  271 KYRIPFYMSCDCEDLLRKFLVLNPSKRGPC-----DQIMKDRWRN  310 (596)
T ss_pred             eecccceeechhHHHHHHhhccCccccCCH-----HHhhhhcccc
Confidence            788999999999999999999999999999     9999999986

>KOG0593|consensus

Probab=96.81  E-value=0.00047  Score=52.64  Aligned_cols=35  Identities=26%  Similarity=0.519  Sum_probs=32.6

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+|.-+.||+++||..||.+|+++     ++++.|+||.+
T Consensus       255 ~~s~~~ld~~k~cL~~dP~~R~sc-----~qll~H~yFd~  289 (396)
T KOG0593|consen  255 KISNVLLDLLKKCLKMDPDDRLSC-----EQLLHHPYFDG  289 (396)
T ss_pred             cchHHHHHHHHHHhcCCccccccH-----HHHhcChHHHH
Confidence            578899999999999999999999     99999999954

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=96.80  E-value=0.00071  Score=51.39  Aligned_cols=35  Identities=14%  Similarity=0.211  Sum_probs=32.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..++++++||.+||..+|.+|++.     .+++.||||+.
T Consensus       271 ~~~~~~~~li~~~L~~dp~~R~t~-----~e~l~h~~f~~  305 (345)
T cd07877         271 GANPLAVDLLEKMLVLDSDKRITA-----AQALAHAYFAQ  305 (345)
T ss_pred             CCCHHHHHHHHHHcCCChhhcCCH-----HHHhcChhhhh
Confidence            358899999999999999999988     99999999984

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0671|consensus

Probab=96.80  E-value=0.00066  Score=52.87  Aligned_cols=32  Identities=19%  Similarity=0.337  Sum_probs=29.3

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+.-|||++||..||++|++.     .|++.||||..
T Consensus       380 ~~LfDLl~~mL~fDP~~RiTl-----~EAL~HpFF~~  411 (415)
T KOG0671|consen  380 VQLFDLLRRMLEFDPARRITL-----REALSHPFFAR  411 (415)
T ss_pred             hHHHHHHHHHHccCccccccH-----HHHhcCHHhhc
Confidence            357899999999999999998     99999999974

>KOG0661|consensus

Probab=96.78  E-value=0.0011  Score=53.00  Aligned_cols=35  Identities=29%  Similarity=0.338  Sum_probs=32.9

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..+.++..||.+||.-||.+|+++     .+.++||||+.
T Consensus       262 ~~s~~~~~li~~ll~WDP~kRpTA-----~~al~~pffq~  296 (538)
T KOG0661|consen  262 NASSEAASLIERLLAWDPDKRPTA-----SQALQHPFFQV  296 (538)
T ss_pred             ccCHHHHHHHHHHhcCCCccCccH-----HHHhcCccccc
Confidence            478999999999999999999998     99999999984

>KOG0983|consensus

Probab=96.76  E-value=0.0026  Score=48.22  Aligned_cols=52  Identities=15%  Similarity=0.300  Sum_probs=42.7

Q ss_pred             hHHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ++..+|+|  .+.+..|.  .+|++.++|+..||++|+.+|+..     .++++|||....
T Consensus       302 e~ltkvln--~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y-----~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  302 EVLTKVLN--EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKY-----NKLLEHPFIKRY  355 (391)
T ss_pred             HHHHHHHh--cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcch-----HHHhcCcceeec
Confidence            45677884  34556663  489999999999999999999988     999999999754

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=96.74  E-value=0.0021  Score=47.10  Aligned_cols=33  Identities=15%  Similarity=0.135  Sum_probs=31.1

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ++.++.+||.+||..||.+|++.     .++..|+||.
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rpt~-----~e~~~~~~~~  270 (284)
T cd06620         238 FPEDLRDFVDACLLKDPTERPTP-----QQLCAMPPFI  270 (284)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCH-----HHHhcCcccc
Confidence            77899999999999999999998     9999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=96.73  E-value=0.0024  Score=45.62  Aligned_cols=37  Identities=11%  Similarity=0.168  Sum_probs=32.9

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++..++.+++++|.+||+.+|.+|+++     .+|..|||+
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~-----~~ll~~~~~  256 (256)
T cd08529         220 PVSQMYSQQLAQLIDQCLTKDYRQRPDT-----FQLLRNPSL  256 (256)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCcCH-----HHHhhCCCC
Confidence            3445778999999999999999999998     999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=96.71  E-value=0.0024  Score=47.13  Aligned_cols=35  Identities=11%  Similarity=0.211  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++.++++||.+||..+|.+|++.     .+|+.|+||..
T Consensus       244 ~~~~~l~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~  278 (296)
T cd06618         244 GFSPDFCSFVDLCLTKDHRKRPKY-----RELLQHPFIRR  278 (296)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCH-----HHHhcChhhhc
Confidence            368899999999999999999998     99999999973

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=96.71  E-value=0.0018  Score=47.97  Aligned_cols=38  Identities=8%  Similarity=0.180  Sum_probs=34.2

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .|..++..+++||.+||..+|.+|+++     .+|+.|+||..
T Consensus       238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~-----~eil~~~~~~~  275 (296)
T cd06654         238 NPEKLSAIFRDFLNRCLDMDVEKRGSA-----KELLQHQFLKI  275 (296)
T ss_pred             CccccCHHHHHHHHHHCcCCcccCcCH-----HHHhhChhhhc
Confidence            456688999999999999999999988     99999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=96.70  E-value=0.0012  Score=48.11  Aligned_cols=32  Identities=25%  Similarity=0.368  Sum_probs=29.9

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+.++++||.+||+.+|.+|++.     .+|+.||||
T Consensus       252 ~~~~~~~li~~cl~~~p~~Rpt~-----~ei~~~~~~  283 (283)
T cd07830         252 ASPEAIDLIKDMLRWDPKKRPTA-----SQALQHPYF  283 (283)
T ss_pred             CCHHHHHHHHHhcccCcccCCCH-----HHHhhCCCC
Confidence            36889999999999999999998     999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=96.70  E-value=0.0012  Score=49.89  Aligned_cols=34  Identities=15%  Similarity=0.313  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .++.+++++|.+||+.+|.+|++.     .+++.|+||.
T Consensus       259 ~~~~~~~~li~~~l~~~P~~R~t~-----~ell~~~~~~  292 (328)
T cd07856         259 NADPSAIDLLEKMLVFDPQKRISA-----AEALAHPYLA  292 (328)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCCccc
Confidence            468899999999999999999998     9999999996

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=96.70  E-value=0.0016  Score=47.56  Aligned_cols=40  Identities=18%  Similarity=0.338  Sum_probs=35.0

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++..++.++.++|.+||..+|.+|++.     .++..||||...
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~-----~~~l~~~~~~~~  259 (277)
T cd06641         220 TLEGNYSKPLKEFVEACLNKEPSFRPTA-----KELLKHKFIVRF  259 (277)
T ss_pred             CCCcccCHHHHHHHHHHccCChhhCcCH-----HHHHhCHHHhhh
Confidence            3455678999999999999999999988     999999999753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=96.69  E-value=0.0012  Score=48.03  Aligned_cols=32  Identities=22%  Similarity=0.430  Sum_probs=30.2

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ++..+.++|.+||..+|.+|++.     .+++.|+||
T Consensus       256 ~~~~~~~~i~~~l~~~P~~Rp~~-----~~~l~~~~~  287 (287)
T cd07840         256 IDPSALDLLDKLLTLDPKKRISA-----DQALQHEYF  287 (287)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCH-----HHHhhCcCC
Confidence            38899999999999999999998     999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=96.68  E-value=0.0017  Score=47.82  Aligned_cols=35  Identities=17%  Similarity=0.363  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++....+||.+||..+|.+|+++     .+|+.|+||+.
T Consensus       240 ~~~~~l~~li~~~l~~~p~~Rpt~-----~~il~~~~~~~  274 (285)
T cd06648         240 KVSPRLRSFLDRMLVRDPAQRATA-----AELLNHPFLAK  274 (285)
T ss_pred             cCCHHHHHHHHHHcccChhhCcCH-----HHHccCccccc
Confidence            478899999999999999999988     99999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=96.68  E-value=0.0016  Score=47.57  Aligned_cols=35  Identities=14%  Similarity=0.241  Sum_probs=31.7

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      |..++..+++||.+||..+|.+|+++     .+|+.|+||
T Consensus       252 ~~~~~~~~~~li~~~l~~~p~~Rps~-----~ell~~~~~  286 (286)
T cd06638         252 PELWSNEFNDFIRKCLTKDYEKRPTV-----SDLLQHVFI  286 (286)
T ss_pred             CCCcCHHHHHHHHHHccCCcccCCCH-----HHHhhcccC
Confidence            44567899999999999999999998     999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=96.67  E-value=0.0016  Score=52.38  Aligned_cols=50  Identities=16%  Similarity=0.257  Sum_probs=40.4

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++.+++ .+ ....+|..+++++++||.+||..+|.+|++.     .+++.|||++.
T Consensus       253 ~~~~~~-~~-~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~-----~ell~~p~~~~  302 (496)
T PTZ00283        253 VMHKTL-AG-RYDPLPPSISPEMQEIVTALLSSDPKRRPSS-----SKLLNMPICKL  302 (496)
T ss_pred             HHHHHh-cC-CCCCCCCCCCHHHHHHHHHHcccChhhCcCH-----HHHHhCHHHHH
Confidence            345555 33 1234677899999999999999999999998     99999999874

>KOG0596|consensus

Probab=96.64  E-value=0.002  Score=52.58  Aligned_cols=42  Identities=19%  Similarity=0.324  Sum_probs=35.8

Q ss_pred             cccCCCCCCHH-HHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          14 KIPFPKHVTRT-AQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        14 ~~~~p~~~s~~-a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .+.||..-+.. +.++++.||.+||.+|.++     .++++|||...+
T Consensus       591 ~Iefp~~~~~~~li~~mK~CL~rdPkkR~si-----~eLLqhpFl~~~  633 (677)
T KOG0596|consen  591 EIEFPDIPENDELIDVMKCCLARDPKKRWSI-----PELLQHPFLQIQ  633 (677)
T ss_pred             cccccCCCCchHHHHHHHHHHhcCcccCCCc-----HHHhcCcccccc
Confidence            45777655544 9999999999999999999     999999999853

>KOG0663|consensus

Probab=96.64  E-value=0.0017  Score=50.21  Aligned_cols=35  Identities=23%  Similarity=0.376  Sum_probs=32.9

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +|..+.+|+.+||..||.+|+++     .+.+.|.||+..
T Consensus       333 lse~g~~Lln~llt~dP~kR~tA-----~~~L~h~~F~e~  367 (419)
T KOG0663|consen  333 LSEQGFDLLNKLLTYDPGKRITA-----EDGLKHEYFRET  367 (419)
T ss_pred             cchhHHHHHHHHhccCccccccH-----HHhhcccccccC
Confidence            78999999999999999999998     999999999864

>KOG0665|consensus

Probab=96.63  E-value=0.00098  Score=51.04  Aligned_cols=35  Identities=20%  Similarity=0.419  Sum_probs=32.0

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      -+..|++|+.+||..||.+|+++     ++++.|||++  -|
T Consensus       282 ~~~~ardll~~MLvi~pe~Risv-----~daL~HPY~~--vw  316 (369)
T KOG0665|consen  282 DCSLARDLLSKMLVIDPEKRISV-----DDALRHPYIK--VW  316 (369)
T ss_pred             chHHHHHHHHHhhccChhhcccH-----HHHhcCCeee--ee
Confidence            35689999999999999999998     9999999998  56

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=96.60  E-value=0.0018  Score=47.93  Aligned_cols=37  Identities=11%  Similarity=0.278  Sum_probs=33.2

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++...+++|.+||..+|.+|++.     .+|+.|+||+..
T Consensus       242 ~~~~~~~~~li~~~l~~~P~~Rpt~-----~~il~~~~~~~~  278 (292)
T cd06658         242 HKVSSVLRGFLDLMLVREPSQRATA-----QELLQHPFLKLA  278 (292)
T ss_pred             cccCHHHHHHHHHHccCChhHCcCH-----HHHhhChhhhcc
Confidence            3578899999999999999999998     999999999843

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=96.58  E-value=0.0036  Score=43.74  Aligned_cols=32  Identities=28%  Similarity=0.526  Sum_probs=30.5

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ++.+..++|.+||..+|.+|++.     .++++||||
T Consensus       213 ~~~~~~~~i~~~l~~~p~~Rp~~-----~~~~~~~~~  244 (244)
T smart00220      213 ISPEAKDLIRKLLVKDPEKRLTA-----EEALQHPFF  244 (244)
T ss_pred             CCHHHHHHHHHHccCCchhccCH-----HHHhhCCCC
Confidence            78899999999999999999988     999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0668|consensus

Probab=96.56  E-value=0.0011  Score=49.11  Aligned_cols=36  Identities=25%  Similarity=0.314  Sum_probs=33.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++++|.|||.+||..|-.+|+++     .|.+.||||..+
T Consensus       293 l~~peaiDlldklLrYDHqeRlTa-----kEam~HpyF~~~  328 (338)
T KOG0668|consen  293 LVSPEAIDLLDKLLRYDHQERLTA-----KEAMAHPYFAPV  328 (338)
T ss_pred             cCChHHHHHHHHHHhhccccccch-----HHHhcCchHHHH
Confidence            367999999999999999999998     999999999743

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=96.55  E-value=0.0043  Score=46.35  Aligned_cols=38  Identities=13%  Similarity=0.190  Sum_probs=33.9

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .++...++||.+||..+|.+|++.     .+++.||||+..+-
T Consensus       244 ~~~~~l~~li~~~l~~~P~~Rp~~-----~~~l~~~~~~~~~~  281 (313)
T cd06633         244 EWTDSFRGFVDYCLQKIPQERPAS-----AELLRHDFVRRDRP  281 (313)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCH-----HHHhcCcccCCCch
Confidence            467889999999999999999998     99999999986553

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=96.55  E-value=0.0016  Score=47.03  Aligned_cols=32  Identities=13%  Similarity=0.256  Sum_probs=29.6

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKW   56 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~   56 (126)
                      .++..+++||.+||..+|.+|++.     .+|+.|||
T Consensus       236 ~~~~~~~~li~~~l~~~P~~R~~~-----~~ll~~~~  267 (267)
T cd06645         236 KWSNSFHHFVKMALTKNPKKRPTA-----EKLLQHPF  267 (267)
T ss_pred             CCCHHHHHHHHHHccCCchhCcCH-----HHHhcCCC
Confidence            467889999999999999999987     99999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=96.53  E-value=0.0015  Score=47.78  Aligned_cols=39  Identities=8%  Similarity=0.123  Sum_probs=35.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      .++.++++||.+||..+|.+|++.     .+|+.|+||....|.
T Consensus       241 ~~~~~l~~li~~~l~~~p~~Rpt~-----~~il~~~~~~~~~~~  279 (286)
T cd06614         241 KWSPEFKDFLNKCLVKDPEKRPSA-----EELLQHPFLKKACPK  279 (286)
T ss_pred             hCCHHHHHHHHHHhccChhhCcCH-----HHHhhChHhhccCch
Confidence            478899999999999999999988     999999999986664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=96.53  E-value=0.0015  Score=47.55  Aligned_cols=36  Identities=25%  Similarity=0.498  Sum_probs=32.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ++.++.++|.+||..+|.+|++.     .+|+.|+||+...
T Consensus       227 ~~~~~~~~i~~~l~~~p~~R~~~-----~~il~~~~~~~~~  262 (277)
T cd06917         227 YSKLLREFVAACLDEEPKERLSA-----EELLKSKWIKAHS  262 (277)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCH-----HHHhhChHhhccc
Confidence            77899999999999999999998     9999999997543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=96.52  E-value=0.0018  Score=45.73  Aligned_cols=31  Identities=16%  Similarity=0.283  Sum_probs=29.3

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKW   56 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~   56 (126)
                      ++..+.++|.+||..+|.+|+++     .+++.|||
T Consensus       223 ~~~~~~~~i~~~l~~~p~~R~t~-----~~~l~~~~  253 (253)
T cd05122         223 WSDEFKDFLKKCLQKNPEKRPTA-----EQLLKHPF  253 (253)
T ss_pred             cCHHHHHHHHHHccCChhhCCCH-----HHHhcCCC
Confidence            48899999999999999999998     99999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=96.52  E-value=0.0044  Score=44.42  Aligned_cols=36  Identities=14%  Similarity=0.203  Sum_probs=32.2

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+..++.+++++|.+||..+|.+|++.     .+++.|+|+
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~-----~~ll~~~~l  256 (256)
T cd08221         221 VVSVYSSELISLVHSLLQQDPEKRPTA-----DEVLDQPLL  256 (256)
T ss_pred             CccccCHHHHHHHHHHcccCcccCCCH-----HHHhhCcCC
Confidence            345678999999999999999999988     999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=96.52  E-value=0.002  Score=47.81  Aligned_cols=36  Identities=19%  Similarity=0.391  Sum_probs=32.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..++..+.++|.+||..+|.+|++.     .+|+.|+||..
T Consensus       240 ~~~~~~l~~li~~~l~~~P~~R~~~-----~~ll~~~~~~~  275 (292)
T cd06657         240 HKVSPSLKGFLDRLLVRDPAQRATA-----AELLKHPFLAK  275 (292)
T ss_pred             ccCCHHHHHHHHHHHhCCcccCcCH-----HHHhcChHHhc
Confidence            3578999999999999999999998     99999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=96.51  E-value=0.0015  Score=48.41  Aligned_cols=37  Identities=5%  Similarity=0.111  Sum_probs=33.0

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++...+++|.+||..+|.+|++.     .+|..|+||+..
T Consensus       239 ~~~~~~l~~li~~~l~~~p~~Rp~~-----~~il~h~~~~~~  275 (293)
T cd06647         239 EKLSAIFRDFLNRCLEMDVEKRGSA-----KELLQHPFLKIA  275 (293)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCH-----HHHhcCHHHhcC
Confidence            3567889999999999999999987     999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0659|consensus

Probab=96.49  E-value=0.0015  Score=48.94  Aligned_cols=35  Identities=20%  Similarity=0.375  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..|.++.||+.+||..||.+|+++     .+...|+||..
T Consensus       252 aas~d~ldLl~~m~~ynP~~Rita-----~qaL~~~yf~~  286 (318)
T KOG0659|consen  252 AASSDALDLLSKMLTYNPKKRITA-----SQALKHPYFKS  286 (318)
T ss_pred             cccHHHHHHHHhhhccCchhcccH-----HHHhcchhhhc
Confidence            567899999999999999999999     99999999984

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=96.46  E-value=0.002  Score=46.99  Aligned_cols=41  Identities=17%  Similarity=0.219  Sum_probs=35.1

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ++..++..+.+||.+||..+|.+|++.     .+|..|+||....-
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~~  261 (277)
T cd06640         221 LTGEFSKPFKEFIDACLNKDPSFRPTA-----KELLKHKFIVKNAK  261 (277)
T ss_pred             CchhhhHHHHHHHHHHcccCcccCcCH-----HHHHhChHhhhcch
Confidence            334567899999999999999999988     99999999976544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=96.45  E-value=0.002  Score=48.46  Aligned_cols=34  Identities=18%  Similarity=0.333  Sum_probs=31.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..+..+++||.+||+.+|.+|++.     .+++.|||++
T Consensus       263 ~~~~~~~~li~~~l~~~P~~R~t~-----~~ll~~~~~~  296 (332)
T cd07857         263 NANPLALDLLEKLLAFDPTKRISV-----EEALEHPYLA  296 (332)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCH-----HHHhcChhhh
Confidence            358899999999999999999988     9999999995

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=96.44  E-value=0.0016  Score=49.04  Aligned_cols=36  Identities=25%  Similarity=0.362  Sum_probs=33.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++.++.+||.+||+.+|.+|++.     .+++.|+|++.+
T Consensus       266 ~~~~~l~~li~~~l~~~P~~Rps~-----~~il~~~~~~~~  301 (337)
T cd07852         266 KASDDALDLLKKLLVFNPNKRLTA-----EEALEHPYVAQF  301 (337)
T ss_pred             CCCHHHHHHHHHhccCCcccccCH-----HHHhhChhhhhh
Confidence            368899999999999999999998     999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=96.41  E-value=0.0051  Score=43.87  Aligned_cols=36  Identities=17%  Similarity=0.209  Sum_probs=32.1

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .+..++.+++++|.+||..+|.+|++.     .+++.||+.
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~~l~~p~~  256 (256)
T cd08530         221 IPPIYSQDLQNFIRSMLQVKPKLRPNC-----DKILASPAV  256 (256)
T ss_pred             CchhhCHHHHHHHHHHcCCCcccCCCH-----HHHhcCCCC
Confidence            445678999999999999999999998     999999973

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=96.40  E-value=0.001  Score=48.51  Aligned_cols=42  Identities=14%  Similarity=0.275  Sum_probs=35.5

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      .+..++.++.++|.+||..+|.+|++.     .+|..|+||....+.
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~~~  262 (277)
T cd06642         221 LEGQYSKPFKEFVEACLNKDPRFRPTA-----KELLKHKFITRYTKK  262 (277)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCH-----HHHHHhHHHHHHhhh
Confidence            334577899999999999999999988     999999999765443

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=96.39  E-value=0.0024  Score=50.93  Aligned_cols=50  Identities=20%  Similarity=0.350  Sum_probs=39.9

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++..++ .+ ....+|..++.++++||.+||..+|.+|++.     .+++.|+|++.
T Consensus       279 ~~~~~~-~~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~-----~~~l~~~~~~~  328 (478)
T PTZ00267        279 IMQQVL-YG-KYDPFPCPVSSGMKALLDPLLSKNPALRPTT-----QQLLHTEFLKY  328 (478)
T ss_pred             HHHHHH-hC-CCCCCCccCCHHHHHHHHHHhccChhhCcCH-----HHHHhCHHHHH
Confidence            445555 33 1234667889999999999999999999998     99999999864

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=96.34  E-value=0.0033  Score=46.85  Aligned_cols=37  Identities=14%  Similarity=0.196  Sum_probs=33.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++..+++||++||..+|.+|++.     .+++.|+|+...
T Consensus       237 ~~~~~~~~~li~~cl~~~P~~Rp~~-----~~ll~~~~~~~~  273 (308)
T cd06634         237 GHWSEYFRNFVDSCLQKIPQDRPTS-----EVLLKHRFVLRE  273 (308)
T ss_pred             ccccHHHHHHHHHHhhCCcccCCCH-----HHHhhCcccccc
Confidence            3578899999999999999999998     999999999853

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG1290|consensus

Probab=96.32  E-value=0.0018  Score=52.09  Aligned_cols=42  Identities=14%  Similarity=0.313  Sum_probs=37.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .|.||..-..+..+||.-||+.+|.+|+++     .+.+.|||+..+
T Consensus       515 KY~~s~e~A~~fsdFL~PmLef~PeKR~tA-----~~cl~hPwLn~~  556 (590)
T KOG1290|consen  515 KYEWSEEDAQQFSDFLSPMLEFDPEKRPTA-----AQCLKHPWLNPV  556 (590)
T ss_pred             HhCCCHHHHHHHHHHHHHHHhcCccccccH-----HHHhcCccccCC
Confidence            677777777889999999999999999998     999999999854

>KOG1167|consensus

Probab=96.30  E-value=0.0028  Score=49.82  Aligned_cols=38  Identities=21%  Similarity=0.283  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ...+..+.||+.+||..||.+|+++     ++.+.||||...+
T Consensus       351 d~~~~~~~dlLdk~le~np~kRitA-----EeALkHpFF~~~~  388 (418)
T KOG1167|consen  351 DVFPALLLDLLDKCLELNPQKRITA-----EDALKHPFFDEAD  388 (418)
T ss_pred             ccccHHHHHHHHHHccCChhhcccH-----HHHhcCcCCcchh
Confidence            4567799999999999999999998     9999999998543

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=96.25  E-value=0.0025  Score=47.35  Aligned_cols=35  Identities=11%  Similarity=0.262  Sum_probs=32.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++..+++||.+||..+|.+|+++     .+|..|+||..
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~  272 (307)
T cd06607         238 DWSDYFRNFVDSCLQKIPQDRPSS-----EELLKHRFVLR  272 (307)
T ss_pred             hhCHHHHHHHHHHhcCChhhCcCH-----HHHhcChhhcc
Confidence            467899999999999999999988     99999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=96.23  E-value=0.0041  Score=44.91  Aligned_cols=32  Identities=16%  Similarity=0.224  Sum_probs=29.6

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKW   56 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~   56 (126)
                      .++..+.+||++||..+|.+|++.     ++|+.|+|
T Consensus       236 ~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~~l~  267 (267)
T cd06646         236 KWSSTFHNFVKISLTKNPKKRPTA-----ERLLTHLF  267 (267)
T ss_pred             ccCHHHHHHHHHHhhCChhhCcCH-----HHHhcCCC
Confidence            468899999999999999999988     99999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0582|consensus

Probab=96.16  E-value=0.0046  Score=49.32  Aligned_cols=37  Identities=16%  Similarity=0.319  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      .++...+.+|..||++||.+|+++     .+++.|+||+..-
T Consensus       264 ~~~ksf~e~i~~CL~kDP~kRptA-----skLlkh~FFk~~k  300 (516)
T KOG0582|consen  264 KFSKSFREMIALCLVKDPSKRPTA-----SKLLKHAFFKKAK  300 (516)
T ss_pred             hhcHHHHHHHHHHhhcCcccCCCH-----HHHhccHHHhhcc
Confidence            467889999999999999999998     9999999998543

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=96.15  E-value=0.0044  Score=45.97  Aligned_cols=36  Identities=11%  Similarity=0.326  Sum_probs=32.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..++....++|.+||+.+|.+|++.     .+|+.|+||..
T Consensus       241 ~~~~~~l~~~i~~~l~~~P~~Rps~-----~~ll~~~~~~~  276 (297)
T cd06659         241 HKISPVLRDFLERMLTREPQERATA-----QELLDHPFLLQ  276 (297)
T ss_pred             CCCCHHHHHHHHHHhcCCcccCcCH-----HHHhhChhhcc
Confidence            4578899999999999999999988     99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG4236|consensus

Probab=96.12  E-value=0.0038  Score=51.15  Aligned_cols=66  Identities=21%  Similarity=0.370  Sum_probs=50.3

Q ss_pred             HHHHHHhcCCCcccCCC----CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC-ChhHHhc--CCCCCCcc
Q psy3183           3 TYNMIINVGIDKIPFPK----HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF-DWDGLRN--QTLTPPII   75 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~----~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v-~w~~l~~--~~~~ppf~   75 (126)
                      +-.+|. +.  .+-||+    .+|.+|.|||.+||+..-.+|.+.     ...+.|||+++. -|-+|..  .++-+-|+
T Consensus       772 IndQIQ-NA--aFMyPp~PW~eis~~AidlIn~LLqVkm~kRysv-----dk~lsh~Wlq~yq~w~DLRelE~~igeRyi  843 (888)
T KOG4236|consen  772 INDQIQ-NA--AFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSV-----DKSLSHPWLQDYQTWLDLRELEVRIGERYI  843 (888)
T ss_pred             hhHHhh-cc--ccccCCCchhhcCHHHHHHHHHHHHHHHHHhcch-----HhhccchhhhcchHHHHHHHHHHhhCccee
Confidence            556777 44  677774    589999999999999999999998     999999999974 5766543  33334444


Q ss_pred             c
Q psy3183          76 P   76 (126)
Q Consensus        76 P   76 (126)
                      -
T Consensus       844 T  844 (888)
T KOG4236|consen  844 T  844 (888)
T ss_pred             c
Confidence            3

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=96.06  E-value=0.0094  Score=43.05  Aligned_cols=38  Identities=16%  Similarity=0.328  Sum_probs=32.7

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ...|..++..++++|.+||. +|.+|++.     ++|+.|+|++
T Consensus       228 ~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~-----~~il~~~~~~  265 (265)
T cd06652         228 PVLPPHVSDHCRDFLKRIFV-EAKLRPSA-----DELLRHTFVH  265 (265)
T ss_pred             CCCchhhCHHHHHHHHHHhc-ChhhCCCH-----HHHhcCcccC
Confidence            34566788999999999995 89999988     9999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0584|consensus

Probab=96.06  E-value=0.0058  Score=50.26  Aligned_cols=51  Identities=22%  Similarity=0.349  Sum_probs=42.1

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++|+++. .|+.+-.+..--.++++.||.+||.. .+.|+++     .+++.|+||..
T Consensus       251 QIYKKV~-SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa-----~eLL~d~Ff~~  301 (632)
T KOG0584|consen  251 QIYKKVT-SGIKPAALSKVKDPEVREFIEKCLAT-KSERLSA-----KELLKDPFFDE  301 (632)
T ss_pred             HHHHHHH-cCCCHHHhhccCCHHHHHHHHHHhcC-chhccCH-----HHHhhChhhcc
Confidence            5789998 77444445445579999999999987 9999998     99999999984

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=96.03  E-value=0.0074  Score=45.12  Aligned_cols=35  Identities=11%  Similarity=0.226  Sum_probs=32.2

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..++..+++||.+||..+|.+|++.     .+|..|+|+.
T Consensus       247 ~~~~~~l~~li~~~l~~~p~~Rpt~-----~~il~~~~~~  281 (317)
T cd06635         247 NEWSDYFRNFVDSCLQKIPQDRPTS-----EELLKHMFVL  281 (317)
T ss_pred             ccccHHHHHHHHHHccCCcccCcCH-----HHHHhChhhh
Confidence            4578899999999999999999988     9999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=96.02  E-value=0.0037  Score=44.81  Aligned_cols=33  Identities=15%  Similarity=0.264  Sum_probs=29.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKW   56 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~   56 (126)
                      ..++.++++||.+||..+|..|++.     .+|+.|+|
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~~~~  262 (262)
T cd06613         230 EKWSPVFHDFIKKCLTKDPKKRPTA-----TKLLQHPF  262 (262)
T ss_pred             hhhhHHHHHHHHHHcCCChhhCCCH-----HHHhcCCC
Confidence            3457889999999999999999998     99999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0666|consensus

Probab=96.01  E-value=0.0038  Score=48.04  Aligned_cols=34  Identities=21%  Similarity=0.332  Sum_probs=31.1

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      -++.+-+|+.+||+.||.+|+++     .+.++|+||..
T Consensus       309 k~~~a~~LL~klL~yDP~kRIta-----~qAleh~yF~~  342 (438)
T KOG0666|consen  309 KDPSALDLLQKLLTYDPIKRITA-----EQALEHPYFTE  342 (438)
T ss_pred             CCchHHHHHHHHhccCchhhccH-----HHHhccccccc
Confidence            45679999999999999999998     99999999984

>KOG1027|consensus

Probab=95.99  E-value=0.005  Score=52.19  Aligned_cols=30  Identities=27%  Similarity=0.386  Sum_probs=29.2

Q ss_pred             HHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          24 TAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        24 ~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      +|+|||.+||..+|..|+++     .+|+.||+|-
T Consensus       742 eA~dLI~~ml~~dP~~RPsa-----~~VL~HPlFW  771 (903)
T KOG1027|consen  742 EAKDLISRMLNPDPQLRPSA-----TDVLNHPLFW  771 (903)
T ss_pred             HHHHHHHHhcCCCcccCCCH-----HHHhCCCccC
Confidence            99999999999999999998     9999999996

>KOG0658|consensus

Probab=95.92  E-value=0.0051  Score=47.62  Aligned_cols=37  Identities=27%  Similarity=0.419  Sum_probs=33.7

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ...+++++.+|+.++|+.+|.+|++.     .++..||||..
T Consensus       275 ~~~~~~d~~dll~~~L~Y~P~~R~~~-----~~~l~h~fFde  311 (364)
T KOG0658|consen  275 FKRLPPDALDLLSKLLQYSPSKRLSA-----LEALAHPFFDE  311 (364)
T ss_pred             ccCCCHHHHHHHHHHhccChhhcCCH-----HHHhcchhhHH
Confidence            35688999999999999999999998     99999999973

>KOG0669|consensus

Probab=95.85  E-value=0.0053  Score=46.11  Aligned_cols=34  Identities=24%  Similarity=0.337  Sum_probs=31.1

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      -+++|.||+.+||..||.+|+.+     .++..|.||..
T Consensus       287 kd~~a~dLle~ll~~DP~kR~~a-----d~alnh~~F~k  320 (376)
T KOG0669|consen  287 KDDEALDLLEKLLKLDPTKRIDA-----DQALNHDFFWK  320 (376)
T ss_pred             CChhHHHHHHHHhccCcccCcch-----Hhhhchhhhhc
Confidence            36799999999999999999988     99999999963

>PHA02988 hypothetical protein; Provisional

Probab=95.67  E-value=0.016  Score=42.81  Aligned_cols=44  Identities=16%  Similarity=0.300  Sum_probs=33.5

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ++..++ ++...+.+|...+..+++||.+||+.||.+|++.     .+|.
T Consensus       230 ~~~~i~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-----~ell  273 (283)
T PHA02988        230 IYDLII-NKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNI-----KEIL  273 (283)
T ss_pred             HHHHHH-hcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCH-----HHHH
Confidence            455565 3223455666789999999999999999999987     6665

>KOG4645|consensus

Probab=95.59  E-value=0.0082  Score=53.22  Aligned_cols=41  Identities=12%  Similarity=0.290  Sum_probs=37.4

Q ss_pred             CcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          13 DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        13 ~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..+.+|..+|++++|||.+||..||++|..+     .||+.|.|-+
T Consensus      1458 h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~-----~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1458 HKPQIPERLSSEGRDFLEHCLEQDPKMRWTA-----SQLLEHAFGK 1498 (1509)
T ss_pred             CCCCCchhhhHhHHHHHHHHHhcCchhhhHH-----HHHHHhhccc
Confidence            3689999999999999999999999999876     7999998876

>KOG0594|consensus

Probab=95.47  E-value=0.01  Score=45.52  Aligned_cols=36  Identities=19%  Similarity=0.350  Sum_probs=32.6

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      .+.++.+|+.+||+.+|.+|+++     ...+.||||..+.
T Consensus       274 ~~~~~~dll~~~L~y~p~~R~Sa-----~~al~h~yf~~~~  309 (323)
T KOG0594|consen  274 LDPDGIELLSKLLQYDPAKRISA-----KGALTHPYFSELP  309 (323)
T ss_pred             cCccHHHHHHHHhccCcccCcCH-----HHHhcChhhcccc
Confidence            44699999999999999999998     9999999999763

>KOG0670|consensus

Probab=95.47  E-value=0.0098  Score=48.61  Aligned_cols=34  Identities=15%  Similarity=0.310  Sum_probs=30.6

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +-...++|+.+||..||.+|+++     .+.+.||||..
T Consensus       718 ~~~~~rdLLdkml~LdP~KRit~-----nqAL~HpFi~~  751 (752)
T KOG0670|consen  718 IVQQLRDLLDKMLILDPEKRITV-----NQALKHPFITE  751 (752)
T ss_pred             HHHHHHHHHHHHhccChhhcCCH-----HHHhcCCcccC
Confidence            34678999999999999999999     99999999963

>KOG0667|consensus

Probab=95.40  E-value=0.012  Score=48.42  Aligned_cols=34  Identities=21%  Similarity=0.307  Sum_probs=30.4

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ....|||++||..||.+|++.     .+.+.|||+.+..
T Consensus       476 ~~F~dflk~~L~~dP~~R~tp-----~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  476 KLFIDFLKRCLEWDPAERITP-----AQALNHPFLTGTS  509 (586)
T ss_pred             HHHHHHHHHHhccCchhcCCH-----HHHhcCccccccc
Confidence            456999999999999999998     9999999998543

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=95.39  E-value=0.026  Score=40.64  Aligned_cols=43  Identities=21%  Similarity=0.345  Sum_probs=33.2

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +...|. ++ ..+..|..++.++++||.+||+.||.+|++.     .+|.
T Consensus       207 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~-----~~i~  249 (257)
T cd05116         207 VTQMIE-SG-ERMECPQRCPPEMYDLMKLCWTYGVDERPGF-----AVVE  249 (257)
T ss_pred             HHHHHH-CC-CCCCCCCCCCHHHHHHHHHHhccCchhCcCH-----HHHH
Confidence            344454 32 2456777899999999999999999999998     6664

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0201|consensus

Probab=95.28  E-value=0.012  Score=46.83  Aligned_cols=37  Identities=16%  Similarity=0.277  Sum_probs=34.1

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      -..+|+.+++||..||.+||..|+++     .+++.|+|.+.
T Consensus       232 ~~~~S~~~kEFV~~CL~k~P~~RpsA-----~~LLKh~FIk~  268 (467)
T KOG0201|consen  232 DGDFSPPFKEFVEACLDKNPEFRPSA-----KELLKHKFIKR  268 (467)
T ss_pred             ccccCHHHHHHHHHHhhcCcccCcCH-----HHHhhhHHHHh
Confidence            35689999999999999999999998     99999999986

>KOG0662|consensus

Probab=95.20  E-value=0.014  Score=41.87  Aligned_cols=36  Identities=28%  Similarity=0.527  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .++...+||+.+||.-+|.+|+++     ++.++||||.+.
T Consensus       254 ~lns~grdllqkll~cnp~qrisa-----eaalqhpyf~d~  289 (292)
T KOG0662|consen  254 KLNSTGRDLLQKLLKCNPAQRISA-----EAALQHPYFSDF  289 (292)
T ss_pred             hhcchhHHHHHHHhccCcccccCH-----HHHhcCcccccc
Confidence            466789999999999999999998     999999999854

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=95.16  E-value=0.027  Score=40.01  Aligned_cols=36  Identities=14%  Similarity=0.343  Sum_probs=30.8

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..++.+..++|.+||..+|.+|+++     .++..|
T Consensus       225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~l~~~  260 (262)
T cd00192         225 RLPKPEYCPDELYELMLSCWQLDPEDRPTF-----SELVER  260 (262)
T ss_pred             CCCCCccCChHHHHHHHHHccCCcccCcCH-----HHHHHh
Confidence            455677889999999999999999999987     777654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.05  E-value=0.042  Score=39.68  Aligned_cols=37  Identities=14%  Similarity=0.221  Sum_probs=32.7

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      ..+|..++..++++|.+||. ++.+|++.     .+++.|||.
T Consensus       228 ~~~p~~~~~~~~~~i~~~l~-~~~~r~~~-----~~~~~~~~~  264 (264)
T cd06653         228 PMLPDGVSDACRDFLKQIFV-EEKRRPTA-----EFLLRHPFV  264 (264)
T ss_pred             CCCCcccCHHHHHHHHHHhc-CcccCccH-----HHHhcCCCC
Confidence            45788899999999999998 57999998     899999983

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=95.03  E-value=0.033  Score=40.60  Aligned_cols=36  Identities=14%  Similarity=0.333  Sum_probs=31.2

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ...+|..++....++|.+||..+|.+|++.     .+|+.|
T Consensus       239 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~-----~~vl~~  274 (277)
T cd05036         239 RLDPPKGCPGPVYRIMTDCWQHTPEDRPNF-----ATILER  274 (277)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHHH
Confidence            455677889999999999999999999998     788765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=95.00  E-value=0.037  Score=39.92  Aligned_cols=39  Identities=18%  Similarity=0.403  Sum_probs=30.7

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +++.+. .+ ..+..|..++.+++++|.+||..+|.+|++.
T Consensus       214 ~~~~~~-~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~  252 (263)
T cd05052         214 VYELLE-KG-YRMERPEGCPPKVYELMRACWQWNPSDRPSF  252 (263)
T ss_pred             HHHHHH-CC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCH
Confidence            344555 32 2456677889999999999999999999987

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=94.94  E-value=0.029  Score=40.42  Aligned_cols=45  Identities=13%  Similarity=0.383  Sum_probs=34.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +++.+. .+ .....|..++.++.++|.+||..||.+|++.     .+|..+
T Consensus       224 ~~~~~~-~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~e~~~~  268 (273)
T cd05035         224 IYDYLR-HG-NRLKQPEDCLDELYDLMYSCWRADPKDRPTF-----TKLREV  268 (273)
T ss_pred             HHHHHH-cC-CCCCCCcCCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            344444 32 2455677889999999999999999999987     776543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=94.91  E-value=0.028  Score=40.85  Aligned_cols=45  Identities=24%  Similarity=0.373  Sum_probs=33.9

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +.+.|. .+ .....|..++.++.+|+.+||..+|.+|++.     .+|..|
T Consensus       235 ~~~~i~-~~-~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~-----~~i~~~  279 (283)
T cd05048         235 VIEMIR-SR-QLLPCPEDCPARVYALMIECWNEIPARRPRF-----KDIHTR  279 (283)
T ss_pred             HHHHHH-cC-CcCCCcccCCHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            344555 32 2334567789999999999999999999988     777654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG1151|consensus

Probab=94.87  E-value=0.036  Score=44.76  Aligned_cols=48  Identities=17%  Similarity=0.325  Sum_probs=39.8

Q ss_pred             HHHHhcCCCcccCC--CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           5 NMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         5 ~~I~~~~~~~~~~p--~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..|+ +. ..+.||  +.+|.+|++||++||...-..|+..     .++..||+|.-
T Consensus       697 NTIl-kA-tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV-----~qLA~dpyllP  746 (775)
T KOG1151|consen  697 NTIL-KA-TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDV-----QQLACDPYLLP  746 (775)
T ss_pred             hchh-cc-eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhH-----HHHccCccccc
Confidence            4466 32 478888  5699999999999999988889877     99999999973

>KOG0611|consensus

Probab=94.83  E-value=0.029  Score=44.85  Aligned_cols=47  Identities=26%  Similarity=0.356  Sum_probs=38.1

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .|.++|. +|  .|.-|. -+.+|+.||+.||.+||.+|.++     .+|.+|=|.
T Consensus       260 ~lvrQIs-~G--aYrEP~-~PSdA~gLIRwmLmVNP~RRATi-----eDiAsHWWv  306 (668)
T KOG0611|consen  260 RLVRQIS-RG--AYREPE-TPSDASGLIRWMLMVNPERRATI-----EDIASHWWV  306 (668)
T ss_pred             HHHHHhh-cc--cccCCC-CCchHHHHHHHHHhcCcccchhH-----HHHhhhhee
Confidence            3667787 66  666554 45589999999999999999998     999999775

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=94.82  E-value=0.045  Score=39.15  Aligned_cols=33  Identities=33%  Similarity=0.522  Sum_probs=28.4

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..|..++..+++||.+||..+|.+|++.     .+|+.
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~  251 (255)
T cd08219         219 PLPSHYSYELRSLIKQMFKRNPRSRPSA-----TTILS  251 (255)
T ss_pred             CCCcccCHHHHHHHHHHHhCCcccCCCH-----HHHhh
Confidence            3566789999999999999999999987     77754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=94.71  E-value=0.028  Score=49.14  Aligned_cols=39  Identities=21%  Similarity=0.118  Sum_probs=34.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ...+.++.+||.+||..+|.+|+++     .+++.|+|++.+..
T Consensus       265 ~~~S~eL~dLI~~~L~~dPeeRPSa-----~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        265 KGKSKELNILIKNLLNLSAKERPSA-----LQCLGYQIIKNVGP  303 (1021)
T ss_pred             CCCCHHHHHHHHHHhcCChhHCcCH-----HHHhccHHHhhcCC
Confidence            3568999999999999999999998     99999999986643

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=94.71  E-value=0.0098  Score=40.42  Aligned_cols=30  Identities=10%  Similarity=0.057  Sum_probs=27.7

Q ss_pred             HHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          24 TAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        24 ~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      +++++|.+||..+|.+|++.     .++..|+|+.
T Consensus       140 ~~~~~i~~cl~~~p~~Rp~~-----~~ll~~~~~~  169 (176)
T smart00750      140 SFADFMRVCASRLPQRREAA-----NHYLAHCRAL  169 (176)
T ss_pred             hHHHHHHHHHhcccccccCH-----HHHHHHHHHH
Confidence            69999999999999999998     9999998864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=94.63  E-value=0.042  Score=39.66  Aligned_cols=44  Identities=16%  Similarity=0.327  Sum_probs=33.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ++..+. ++ ..+..+..++..++++|.+||..+|.+|++.     .+|..
T Consensus       223 ~~~~~~-~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~l~~  266 (272)
T cd05075         223 IYDYLR-QG-NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSF-----ETLRC  266 (272)
T ss_pred             HHHHHH-cC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHH
Confidence            344455 33 2345667788999999999999999999987     67654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0574|consensus

Probab=94.60  E-value=0.0095  Score=45.84  Aligned_cols=37  Identities=16%  Similarity=0.348  Sum_probs=33.8

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      |..+|.+.-|||++||.++|++|.++     .++.+|+|.++
T Consensus       252 PE~WS~~F~DFi~~CLiK~PE~R~TA-----~~L~~H~Fikn  288 (502)
T KOG0574|consen  252 PEEWSSEFNDFIRSCLIKKPEERKTA-----LRLCEHTFIKN  288 (502)
T ss_pred             hHhhhhHHHHHHHHHhcCCHHHHHHH-----HHHhhhhhhcC
Confidence            35689999999999999999999987     89999999985

>KOG0600|consensus

Probab=94.39  E-value=0.034  Score=45.07  Aligned_cols=34  Identities=18%  Similarity=0.260  Sum_probs=32.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .++..+.+|+.+||..||.+|.++     .+.+.|.||.
T Consensus       371 ~~~~~~l~Ll~~lL~ldP~kR~tA-----~~aL~seyF~  404 (560)
T KOG0600|consen  371 DFPASALDLLEKLLSLDPDKRGTA-----SSALQSEYFT  404 (560)
T ss_pred             cCCHHHHHHHHHHhccCccccccH-----HHHhcCcccc
Confidence            578999999999999999999998     9999999994

>KOG1989|consensus

Probab=94.27  E-value=0.016  Score=48.90  Aligned_cols=35  Identities=26%  Similarity=0.519  Sum_probs=31.0

Q ss_pred             HHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCC
Q psy3183           6 MIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus         6 ~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      .|+ ++  .|.||+  ..|...++||+.||+.||.+|+.+
T Consensus       265 aIl-ng--~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI  301 (738)
T KOG1989|consen  265 AIL-NG--NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNI  301 (738)
T ss_pred             eEE-ec--cccCCCCccHHHHHHHHHHHHhccCcccCCCH
Confidence            467 56  899985  689999999999999999999987

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=94.26  E-value=0.069  Score=38.29  Aligned_cols=39  Identities=18%  Similarity=0.462  Sum_probs=30.1

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +++.+. .+ .....|...+....++|.+||+.+|.+|++.
T Consensus       213 ~~~~~~-~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~  251 (261)
T cd05148         213 VYDQIT-AG-YRMPCPAKCPQEIYKIMLECWAAEPEDRPSF  251 (261)
T ss_pred             HHHHHH-hC-CcCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            445555 32 2345567789999999999999999999987

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0590|consensus

Probab=94.22  E-value=0.021  Score=47.27  Aligned_cols=38  Identities=16%  Similarity=0.429  Sum_probs=34.7

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ..++..++.+|.+||+.+|.+|+++     ++|++-+||+.+.
T Consensus       555 ~~lp~~~~~~~~~~l~~~P~~R~ti-----~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  555 SLLPRETRIIIYRMLQLDPTKRITI-----EQILNDEWIRSIE  592 (601)
T ss_pred             HhchhhHHHHHHHHccCChhheecH-----HHHhhChHhhhcc
Confidence            4578899999999999999999998     9999999998764

>KOG4279|consensus

Probab=94.14  E-value=0.048  Score=46.34  Aligned_cols=41  Identities=20%  Similarity=0.397  Sum_probs=37.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+.+|..+|.+|++||.+|+..+|..|+++     .+++..||++.
T Consensus       797 HP~iPeelsaeak~FilrcFepd~~~R~sA-----~~LL~DpFlq~  837 (1226)
T KOG4279|consen  797 HPPIPEELSAEAKNFILRCFEPDPCDRPSA-----KDLLQDPFLQH  837 (1226)
T ss_pred             CCCCcHHHHHHHHHHHHHHcCCCcccCccH-----HHhccCccccc
Confidence            567889999999999999999999999988     99999999984

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=94.03  E-value=0.077  Score=38.72  Aligned_cols=34  Identities=15%  Similarity=0.354  Sum_probs=28.7

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....|..++..+++||.+||+++|.+|++.     .+|.
T Consensus       242 ~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~-----~~l~  275 (280)
T cd05092         242 ELERPRTCPPEVYAIMQGCWQREPQQRMVI-----KDIH  275 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCChhhCCCH-----HHHH
Confidence            345566788999999999999999999988     6665

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=94.00  E-value=0.082  Score=37.98  Aligned_cols=30  Identities=23%  Similarity=0.502  Sum_probs=25.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      .+..|...+..+++||.+||..+|.+|++.
T Consensus       221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  250 (260)
T cd05070         221 RMPCPQDCPISLHELMLQCWKKDPEERPTF  250 (260)
T ss_pred             CCCCCCcCCHHHHHHHHHHcccCcccCcCH
Confidence            344566788999999999999999999987

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=93.95  E-value=0.072  Score=38.35  Aligned_cols=34  Identities=18%  Similarity=0.356  Sum_probs=28.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      .+..+..++..+.+||.+||..+|.+|++.     .+|.
T Consensus       231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i~  264 (269)
T cd05044         231 RLQKPENCPDKIYQLMTNCWAQDPSERPTF-----DRIQ  264 (269)
T ss_pred             ccCCcccchHHHHHHHHHHcCCCcccCCCH-----HHHH
Confidence            445667788999999999999999999987     6664

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=93.93  E-value=0.078  Score=38.88  Aligned_cols=38  Identities=18%  Similarity=0.304  Sum_probs=29.3

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ...|. .+ .....+..++.++.+||.+||..+|.+|++.
T Consensus       232 ~~~i~-~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  269 (288)
T cd05093         232 IECIT-QG-RVLQRPRTCPKEVYDLMLGCWQREPHMRLNI  269 (288)
T ss_pred             HHHHH-cC-CcCCCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            44555 33 1234556788999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=93.88  E-value=0.079  Score=38.76  Aligned_cols=36  Identities=17%  Similarity=0.379  Sum_probs=29.8

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|...+.++.+||.+||..+|.+|+++     .+|..+
T Consensus       252 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~eil~~  287 (293)
T cd05053         252 RMEKPQNCTQELYHLMRDCWHEVPSQRPTF-----KQLVED  287 (293)
T ss_pred             cCCCCCCCCHHHHHHHHHHcccCcccCcCH-----HHHHHH
Confidence            345667788999999999999999999987     777643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=93.84  E-value=0.091  Score=38.04  Aligned_cols=32  Identities=19%  Similarity=0.361  Sum_probs=27.5

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ..|..++...++||.+||..+|.+|++.     .+|+
T Consensus       244 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~eil  275 (280)
T cd05049         244 QRPRTCPSEVYDIMLGCWKRDPQQRINI-----KDIH  275 (280)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCCCH-----HHHH
Confidence            3456789999999999999999999987     6665

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=93.66  E-value=0.11  Score=37.87  Aligned_cols=28  Identities=14%  Similarity=0.343  Sum_probs=24.9

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..|..++.++.+||.+||..+|.+|++.
T Consensus       252 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~  279 (288)
T cd05050         252 SCPDNCPLELYNLMRLCWSKLPSDRPSF  279 (288)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            3456788999999999999999999987

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=93.57  E-value=0.11  Score=37.42  Aligned_cols=29  Identities=28%  Similarity=0.545  Sum_probs=25.2

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ...|..++..+++||++||..+|.+|++.
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05069         222 MPCPQGCPESLHELMKLCWKKDPDERPTF  250 (260)
T ss_pred             CCCCcccCHHHHHHHHHHccCCcccCcCH
Confidence            34456788999999999999999999987

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=93.54  E-value=0.09  Score=37.90  Aligned_cols=34  Identities=18%  Similarity=0.235  Sum_probs=28.4

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ..|...+..+.+||.+||..+|.+|++.     .+|.++
T Consensus       228 ~~~~~~~~~l~~li~~cl~~~p~~Rp~~-----~ei~~~  261 (266)
T cd05033         228 PPPMDCPSALYQLMLDCWQKDRNERPTF-----SQIVST  261 (266)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHHH
Confidence            4456778999999999999999999987     777543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=93.51  E-value=0.11  Score=37.25  Aligned_cols=30  Identities=20%  Similarity=0.435  Sum_probs=26.3

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ....|..++...+++|.+||..+|.+|++.
T Consensus       216 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~  245 (257)
T cd05060         216 RLPRPEECPQEIYSIMLSCWKYRPEDRPTF  245 (257)
T ss_pred             cCCCCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence            345667789999999999999999999987

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=93.50  E-value=0.11  Score=36.86  Aligned_cols=35  Identities=17%  Similarity=0.407  Sum_probs=28.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....+..++.++.++|.+||..+|.+|++.     .++..
T Consensus       222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~-----~~ll~  256 (258)
T smart00219      222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTF-----SELVE  256 (258)
T ss_pred             CCCCCCcCCHHHHHHHHHHCcCChhhCcCH-----HHHHh
Confidence            345566789999999999999999999987     66653

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=93.45  E-value=0.12  Score=37.29  Aligned_cols=35  Identities=14%  Similarity=0.346  Sum_probs=29.7

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ...+|..++.+..+||.+||..+|.+|++.     .+|.+
T Consensus       239 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~l~~  273 (277)
T cd05032         239 HLDLPENCPDKLLELMRMCWQYNPKMRPTF-----LEIVS  273 (277)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCCCH-----HHHHH
Confidence            456677889999999999999999999987     66653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=93.39  E-value=0.11  Score=38.21  Aligned_cols=35  Identities=17%  Similarity=0.378  Sum_probs=29.4

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +..|..++.++++||.+||..+|.+|++.     .+|...
T Consensus       237 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i~~~  271 (297)
T cd05089         237 MEKPRNCDDEVYELMRQCWRDRPYERPPF-----AQISVQ  271 (297)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            44566789999999999999999999998     777543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=93.29  E-value=0.11  Score=37.69  Aligned_cols=34  Identities=15%  Similarity=0.286  Sum_probs=28.6

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ...|...+..++++|.+||+.+|.+|++.     .++..
T Consensus       240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e~l~  273 (277)
T cd05062         240 LDKPDNCPDMLFELMRMCWQYNPKMRPSF-----LEIIS  273 (277)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            34566788999999999999999999987     66654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG2345|consensus

Probab=93.28  E-value=0.055  Score=40.51  Aligned_cols=36  Identities=19%  Similarity=0.400  Sum_probs=30.3

Q ss_pred             cccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++.+|.  ..|.....||+.||++||.+|++.     .++..+
T Consensus       259 q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i-----~~ll~~  296 (302)
T KOG2345|consen  259 QISIPNSSRYSEALHQLIKSMLQVDPNQRPTI-----PELLSK  296 (302)
T ss_pred             ccccCCCCCccHHHHHHHHHHhcCCcccCCCH-----HHHHHH
Confidence            677773  489999999999999999999998     666543

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=93.26  E-value=0.12  Score=36.96  Aligned_cols=34  Identities=15%  Similarity=0.411  Sum_probs=28.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....|...+..+++||.+||..+|.+|++.     .+|.
T Consensus       214 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~~~  247 (252)
T cd05084         214 RLPCPELCPDAVYRLMERCWEYDPGQRPSF-----STVH  247 (252)
T ss_pred             CCCCcccCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            345566788999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=93.25  E-value=0.13  Score=37.52  Aligned_cols=35  Identities=23%  Similarity=0.419  Sum_probs=29.3

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +..|..++..++++|.+||..+|.+|++.     .+|..+
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~i~~~  279 (283)
T cd05090         245 LPCSEDCPPRMYSLMTECWQEGPSRRPRF-----KDIHTR  279 (283)
T ss_pred             CCCCCCCCHHHHHHHHHHcccCcccCcCH-----HHHHHH
Confidence            44566789999999999999999999987     776543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=93.17  E-value=0.074  Score=38.29  Aligned_cols=35  Identities=17%  Similarity=0.194  Sum_probs=29.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ...+|...+.+..+||.+||+.+|.+|++.     .+|..
T Consensus       221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~  255 (258)
T cd05078         221 RHQLPAPKWTELANLINQCMDYEPDFRPSF-----RAIIR  255 (258)
T ss_pred             cccCCCCCcHHHHHHHHHHhccChhhCCCH-----HHHHH
Confidence            456677788999999999999999999987     77654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PLN00181 protein SPA1-RELATED; Provisional

Probab=93.17  E-value=0.057  Score=45.81  Aligned_cols=33  Identities=12%  Similarity=0.137  Sum_probs=29.9

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ...+.+++.+||..+|.+|+++     .+|+.||||..
T Consensus       238 ~~~~~~~~~~~L~~~P~~Rps~-----~eil~h~~~~~  270 (793)
T PLN00181        238 WPKEASFCLWLLHPEPSCRPSM-----SELLQSEFINE  270 (793)
T ss_pred             CHHHHHHHHHhCCCChhhCcCh-----HHHhhchhhhh
Confidence            4577899999999999999998     99999999975

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=93.17  E-value=0.14  Score=36.65  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=31.6

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ++..|. .+ ..+..|...+..+.+||.+|+..+|.+|++.     .+|.
T Consensus       210 ~~~~i~-~~-~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~-----~~l~  252 (256)
T cd05114         210 VVEMIS-RG-FRLYRPKLASMTVYEVMYSCWHEKPEGRPTF-----AELL  252 (256)
T ss_pred             HHHHHH-CC-CCCCCCCCCCHHHHHHHHHHccCCcccCcCH-----HHHH
Confidence            344455 32 2334566678999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=93.08  E-value=0.14  Score=36.64  Aligned_cols=32  Identities=16%  Similarity=0.294  Sum_probs=27.3

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ..|..++..+.++|.+||..+|.+|++.     .+++
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~l~  250 (256)
T cd05039         219 EAPEGCPPEVYKVMKDCWELDPAKRPTF-----KQLR  250 (256)
T ss_pred             CCccCCCHHHHHHHHHHhccChhhCcCH-----HHHH
Confidence            4556788999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=93.04  E-value=0.15  Score=37.10  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=33.5

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ++..|. .+ ....+|...+....+||.+||..+|.+|++.     .+|..
T Consensus       235 ~~~~i~-~~-~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~-----~~i~~  278 (283)
T cd05091         235 VIEMIR-NR-QVLPCPDDCPAWVYTLMLECWNEFPSRRPRF-----KDIHS  278 (283)
T ss_pred             HHHHHH-cC-CcCCCCCCCCHHHHHHHHHHhCCCcccCCCH-----HHHHH
Confidence            445555 32 2334567789999999999999999999987     77764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=93.00  E-value=0.15  Score=36.69  Aligned_cols=43  Identities=12%  Similarity=0.192  Sum_probs=31.9

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ...|. .+ .....+...+...+++|.+||..+|.+|+++     .+|..
T Consensus       211 ~~~~~-~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~ll~  253 (256)
T cd05113         211 VEKVS-QG-LRLYRPHLASEKVYAIMYSCWHEKAEERPTF-----QQLLS  253 (256)
T ss_pred             HHHHh-cC-CCCCCCCCCCHHHHHHHHHHcCCCcccCCCH-----HHHHH
Confidence            44555 32 2333456678999999999999999999987     77654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=92.83  E-value=0.11  Score=37.53  Aligned_cols=44  Identities=18%  Similarity=0.379  Sum_probs=32.4

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ++..+. .+ ..+..+...+..+.+++.+||..+|.+|++.     .+++.
T Consensus       224 ~~~~~~-~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~-----~~~~~  267 (273)
T cd05074         224 IYNYLI-KG-NRLKQPPDCLEDVYELMCQCWSPEPKCRPSF-----QHLRD  267 (273)
T ss_pred             HHHHHH-cC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            344444 32 2445566788999999999999999999987     66654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=92.82  E-value=0.18  Score=35.89  Aligned_cols=33  Identities=9%  Similarity=0.321  Sum_probs=28.0

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ...|..++..+.+||.+||..+|.+|++.     .++.
T Consensus       213 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~l~  245 (250)
T cd05085         213 MSCPQKCPDDVYKVMQRCWDYKPENRPKF-----SELQ  245 (250)
T ss_pred             CCCCCCCCHHHHHHHHHHcccCcccCCCH-----HHHH
Confidence            45566788999999999999999999987     6654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=92.79  E-value=0.14  Score=37.94  Aligned_cols=35  Identities=11%  Similarity=0.302  Sum_probs=29.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....|..++.++++||.+||..+|.+|++.     .+|..
T Consensus       260 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~evl~  294 (307)
T cd05098         260 RMDKPSNCTNELYMMMRDCWHAVPSQRPTF-----KQLVE  294 (307)
T ss_pred             CCCCCCcCCHHHHHHHHHHcccChhhCcCH-----HHHHH
Confidence            345667789999999999999999999987     66654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=92.68  E-value=0.14  Score=36.72  Aligned_cols=33  Identities=12%  Similarity=0.265  Sum_probs=27.7

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ...+..++...+++|.+||..+|.+|++.     .++.
T Consensus       218 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~l~  250 (256)
T cd05082         218 MDAPDGCPPVVYDVMKQCWHLDAATRPSF-----LQLR  250 (256)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCChhhCcCH-----HHHH
Confidence            34556788999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=92.63  E-value=0.17  Score=36.54  Aligned_cols=30  Identities=13%  Similarity=0.193  Sum_probs=26.7

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      .+..|...+.++.++|.+|+..+|.+|++.
T Consensus       216 ~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~  245 (257)
T cd05115         216 RLDCPAECPPEMYALMKDCWIYKWEDRPNF  245 (257)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            455677889999999999999999999987

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=92.60  E-value=0.15  Score=38.24  Aligned_cols=34  Identities=18%  Similarity=0.317  Sum_probs=28.8

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....|...+.++++||.+||..+|.+|++.     .+|.
T Consensus       295 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~-----~el~  328 (338)
T cd05102         295 RMRAPENATPEIYRIMLACWQGDPKERPTF-----SALV  328 (338)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HHHH
Confidence            345567789999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=92.59  E-value=0.18  Score=37.48  Aligned_cols=33  Identities=15%  Similarity=0.294  Sum_probs=28.1

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ...|..++.+.++||.+||..+|.+|++.     .+|.
T Consensus       255 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~-----~~ll  287 (314)
T cd05099         255 MDKPSNCTHELYMLMRECWHAVPTQRPTF-----KQLV  287 (314)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHH
Confidence            45667788999999999999999999987     6655

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=92.55  E-value=0.19  Score=35.87  Aligned_cols=32  Identities=19%  Similarity=0.356  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .|...+..+.+|+.+||..+|.+|++.     .++++
T Consensus       222 ~~~~~~~~~~~l~~~~l~~~p~~Rp~~-----~~~l~  253 (256)
T cd05112         222 KPRLASQSVYELMQHCWKERPEDRPSF-----SLLLH  253 (256)
T ss_pred             CCCCCCHHHHHHHHHHcccChhhCCCH-----HHHHH
Confidence            355678999999999999999999987     67654

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=92.54  E-value=0.16  Score=36.71  Aligned_cols=35  Identities=23%  Similarity=0.474  Sum_probs=29.3

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .+..|..++.+++++|.+||..+|.+|++.     .+++.
T Consensus       226 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~~~~  260 (270)
T cd05056         226 RLPMPPNCPPTLYSLMTKCWAYDPSKRPRF-----TELKA  260 (270)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            455667889999999999999999999987     66553

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=92.53  E-value=0.18  Score=36.49  Aligned_cols=32  Identities=13%  Similarity=0.285  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .+..++...+++|.+||..+|.+|++.     .+++.
T Consensus       240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~-----~~~l~  271 (275)
T cd05046         240 VPEGCPSRLYKLMTRCWAVNPKDRPSF-----SELVS  271 (275)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCH-----HHHHH
Confidence            345688999999999999999999987     77654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=92.42  E-value=0.18  Score=35.80  Aligned_cols=33  Identities=18%  Similarity=0.323  Sum_probs=28.0

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +..|..++...+++|.+||..+|.+|++.     .+|.
T Consensus       214 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~ell  246 (251)
T cd05041         214 MPAPQLCPEEIYRLMLQCWAYDPENRPSF-----SEIY  246 (251)
T ss_pred             CCCCccCCHHHHHHHHHHhccChhhCcCH-----HHHH
Confidence            44566788999999999999999999987     6665

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=92.31  E-value=0.2  Score=35.87  Aligned_cols=35  Identities=14%  Similarity=0.305  Sum_probs=29.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .+..|...+....++|.+||..+|.+|++.     .+|..
T Consensus       219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~~~l~  253 (256)
T cd05059         219 RLYRPKLAPTEVYTIMYSCWHEKPEDRPAF-----KKLLS  253 (256)
T ss_pred             cCCCCCCCCHHHHHHHHHHhcCChhhCcCH-----HHHHH
Confidence            345566789999999999999999999987     66653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=92.21  E-value=0.23  Score=35.56  Aligned_cols=34  Identities=9%  Similarity=0.174  Sum_probs=27.9

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +..|..++....+++.+||..+|.+|++.     .+|..
T Consensus       221 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~il~  254 (262)
T cd05058         221 LLQPEYCPDPLYEVMLSCWHPKPEMRPTF-----SELVS  254 (262)
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhhCCCH-----HHHHH
Confidence            34456678999999999999999999987     66653

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=92.15  E-value=0.17  Score=37.50  Aligned_cols=34  Identities=21%  Similarity=0.317  Sum_probs=28.8

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ..|..++.++.+||.+||..+|.+|++.     .+++.+
T Consensus       243 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~  276 (303)
T cd05088         243 EKPLNCDDEVYDLMRQCWREKPYERPSF-----AQILVS  276 (303)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            3455678999999999999999999988     777655

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=92.14  E-value=0.24  Score=35.53  Aligned_cols=29  Identities=21%  Similarity=0.453  Sum_probs=25.3

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ...+...+..++++|.+||..+|.+|++.
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  251 (261)
T cd05068         223 MPCPPGCPKELYDIMLDCWKEDPDDRPTF  251 (261)
T ss_pred             CCCCCcCCHHHHHHHHHHhhcCcccCCCH
Confidence            34556788999999999999999999987

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=92.05  E-value=0.22  Score=35.67  Aligned_cols=28  Identities=29%  Similarity=0.494  Sum_probs=24.6

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..|...+.+.+++|.+||..+|.+|++.
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05067         223 PRPDNCPEELYELMRLCWKEKPEERPTF  250 (260)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            4456678899999999999999999987

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=91.99  E-value=0.25  Score=35.27  Aligned_cols=33  Identities=12%  Similarity=0.324  Sum_probs=27.5

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ...|..++....++|.+||..+|.+|++.     .+|.
T Consensus       220 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~~~  252 (257)
T cd05040         220 LERPEACPQDIYNVMLQCWAHNPADRPTF-----AALR  252 (257)
T ss_pred             CCCCccCCHHHHHHHHHHCCCCcccCCCH-----HHHH
Confidence            34456678999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=91.88  E-value=0.23  Score=36.46  Aligned_cols=28  Identities=14%  Similarity=0.323  Sum_probs=24.5

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..+...+..+.+||.+||..+|.+|++.
T Consensus       245 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~  272 (291)
T cd05094         245 ERPRVCPKEVYDIMLGCWQREPQQRLNI  272 (291)
T ss_pred             CCCccCCHHHHHHHHHHcccChhhCcCH
Confidence            3455678999999999999999999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=91.85  E-value=0.28  Score=35.13  Aligned_cols=26  Identities=19%  Similarity=0.272  Sum_probs=23.5

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +..++.++.+||.+||..+|.+|++.
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rp~~  251 (261)
T cd05072         226 MENCPDELYDIMKTCWKEKAEERPTF  251 (261)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCH
Confidence            34678999999999999999999987

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=91.84  E-value=0.15  Score=36.85  Aligned_cols=42  Identities=21%  Similarity=0.469  Sum_probs=29.6

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ..++. .+ .....|..++....++|.+|+..+|.+|++.     .+|.
T Consensus       215 ~~~~~-~~-~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~-----~~i~  256 (259)
T PF07714_consen  215 IEKLK-QG-QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSF-----QEIL  256 (259)
T ss_dssp             HHHHH-TT-EETTSBTTSBHHHHHHHHHHT-SSGGGS--H-----HHHH
T ss_pred             ccccc-cc-ccceeccchhHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            44555 33 2445667889999999999999999999987     6664

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=91.74  E-value=0.26  Score=35.57  Aligned_cols=28  Identities=21%  Similarity=0.470  Sum_probs=24.5

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..+..++..+.+||.+||.++|.+|++.
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~  250 (262)
T cd05071         223 PCPPECPESLHDLMCQCWRKEPEERPTF  250 (262)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCCCH
Confidence            3445688999999999999999999987

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0589|consensus

Probab=91.66  E-value=0.21  Score=39.85  Aligned_cols=50  Identities=18%  Similarity=0.304  Sum_probs=41.2

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .|..+|. ++ .-...|...|.+.+.||+.||.++|..|++.     .+++.+|...
T Consensus       213 ~Li~ki~-~~-~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa-----~~LL~~P~l~  262 (426)
T KOG0589|consen  213 ELILKIN-RG-LYSPLPSMYSSELRSLVKSMLRKNPEHRPSA-----LELLRRPHLL  262 (426)
T ss_pred             HHHHHHh-hc-cCCCCCccccHHHHHHHHHHhhcCCccCCCH-----HHHhhChhhh
Confidence            4566777 54 1245678899999999999999999999998     9999998776

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=91.65  E-value=0.29  Score=35.01  Aligned_cols=28  Identities=21%  Similarity=0.383  Sum_probs=24.4

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..|...+.+.+++|.+||..+|.+|++.
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  251 (261)
T cd05034         224 PRPPNCPEELYDLMLQCWDKDPEERPTF  251 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            3455678999999999999999999987

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=91.60  E-value=0.22  Score=38.43  Aligned_cols=33  Identities=15%  Similarity=0.259  Sum_probs=27.8

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..|...+.++++||.+||..||.+|++.     .+|..
T Consensus       337 ~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~  369 (375)
T cd05104         337 LSPECAPSEMYDIMKSCWDADPLKRPTF-----KQIVQ  369 (375)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCH-----HHHHH
Confidence            3456678999999999999999999987     77753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=91.60  E-value=0.23  Score=35.60  Aligned_cols=25  Identities=16%  Similarity=0.317  Sum_probs=22.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..++...++||.+||..+|.+|++.
T Consensus       231 ~~~~~~~~~li~~~l~~~p~~Rpt~  255 (267)
T cd08229         231 DHYSEELRQLVNMCINPDPEKRPDI  255 (267)
T ss_pred             ccccHHHHHHHHHhcCCCcccCCCH
Confidence            3578899999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=91.44  E-value=0.14  Score=37.43  Aligned_cols=31  Identities=13%  Similarity=0.269  Sum_probs=26.4

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      .|..++.++.+||.+||..+|.+|++.     .+|.
T Consensus       261 ~~~~~~~~l~~li~~cl~~~p~~Rpt~-----~el~  291 (296)
T cd05051         261 RPPNCPKDIYELMLECWRRDEEDRPTF-----REIH  291 (296)
T ss_pred             CccCCCHHHHHHHHHHhccChhcCCCH-----HHHH
Confidence            345677999999999999999999987     7764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=91.41  E-value=0.24  Score=37.21  Aligned_cols=36  Identities=11%  Similarity=0.299  Sum_probs=30.2

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|...+.++.+||.+||..+|.+|++.     .+|+.+
T Consensus       254 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-----~ell~~  289 (334)
T cd05100         254 RMDKPANCTHELYMIMRECWHAVPSQRPTF-----KQLVED  289 (334)
T ss_pred             CCCCCCCCCHHHHHHHHHHcccChhhCcCH-----HHHHHH
Confidence            344566788999999999999999999987     777765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=91.39  E-value=0.14  Score=37.40  Aligned_cols=33  Identities=15%  Similarity=0.358  Sum_probs=27.7

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..+..++..+.+||.+||..+|.+|++.     .+|..
T Consensus       246 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~  278 (284)
T cd05079         246 PRPPNCPEEVYQLMRKCWEFQPSKRTTF-----QNLIE  278 (284)
T ss_pred             CCCCCCCHHHHHHHHHHccCCcccCcCH-----HHHHH
Confidence            3456688999999999999999999987     66653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=91.31  E-value=0.31  Score=34.80  Aligned_cols=29  Identities=14%  Similarity=0.292  Sum_probs=24.9

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +..+..++..++++|.+||.++|.+|++.
T Consensus       216 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  244 (254)
T cd05083         216 MEPPEGCPADVYVLMTSCWETEPKKRPSF  244 (254)
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhhCcCH
Confidence            33455678999999999999999999987

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=91.28  E-value=0.31  Score=35.26  Aligned_cols=33  Identities=21%  Similarity=0.374  Sum_probs=27.7

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +..+..++.+..+||.+||..+|.+|++.     .+|.
T Consensus       230 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il  262 (270)
T cd05047         230 LEKPLNCDDEVYDLMRQCWREKPYERPSF-----AQIL  262 (270)
T ss_pred             CCCCCcCCHHHHHHHHHHcccChhhCCCH-----HHHH
Confidence            34556688999999999999999999987     6654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=91.18  E-value=0.31  Score=35.92  Aligned_cols=34  Identities=12%  Similarity=0.259  Sum_probs=28.4

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ...|...+.++++||.+||..+|.+|++.     .+|..
T Consensus       258 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~-----~e~l~  291 (304)
T cd05101         258 MDKPANCTNELYMMMRDCWHAIPSHRPTF-----KQLVE  291 (304)
T ss_pred             CCCCCCCCHHHHHHHHHHcccChhhCCCH-----HHHHH
Confidence            34566788999999999999999999987     66653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=91.07  E-value=0.29  Score=35.53  Aligned_cols=32  Identities=13%  Similarity=0.217  Sum_probs=26.6

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ..+..++.++.++|.+||..+|++|++.     .++.
T Consensus       239 ~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~~~  270 (280)
T cd05043         239 AQPINCPDELFAVMACCWALDPEERPSF-----SQLV  270 (280)
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhhCCCH-----HHHH
Confidence            3445678999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=91.05  E-value=0.35  Score=35.36  Aligned_cols=33  Identities=21%  Similarity=0.410  Sum_probs=27.8

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ...|..++.+.+++|.+||..+|.+|++.     .+|.
T Consensus       248 ~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~-----~~i~  280 (290)
T cd05045         248 MERPENCSEEMYNLMLTCWKQEPDKRPTF-----ADIS  280 (290)
T ss_pred             CCCCCCCCHHHHHHHHHHccCCcccCCCH-----HHHH
Confidence            34466788999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=91.02  E-value=0.36  Score=35.77  Aligned_cols=32  Identities=19%  Similarity=0.346  Sum_probs=27.1

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ..|..++.++.+||.+||..+|.+|++.     .+|.
T Consensus       264 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~ell  295 (302)
T cd05055         264 AQPEHAPAEIYDIMKTCWDADPLKRPTF-----KQIV  295 (302)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCH-----HHHH
Confidence            3445678999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=91.01  E-value=0.38  Score=34.76  Aligned_cols=33  Identities=18%  Similarity=0.381  Sum_probs=28.1

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ...|..++..+.++|.+|+..+|.+|++.     .+|.
T Consensus       227 ~~~~~~~~~~~~~li~~c~~~~p~~RP~~-----~~i~  259 (266)
T cd05064         227 LPAPRNCPNLLHQLMLDCWQKERGERPRF-----SQIH  259 (266)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCchhCCCH-----HHHH
Confidence            34566788999999999999999999987     6665

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=90.69  E-value=0.41  Score=34.48  Aligned_cols=28  Identities=18%  Similarity=0.308  Sum_probs=24.2

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..+..++..+++++.+||+.+|.+|++.
T Consensus       229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~  256 (267)
T cd05066         229 PAPMDCPAALHQLMLDCWQKDRNERPKF  256 (267)
T ss_pred             CCCCCCCHHHHHHHHHHcccCchhCCCH
Confidence            3345678899999999999999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=90.57  E-value=0.28  Score=35.48  Aligned_cols=30  Identities=13%  Similarity=0.177  Sum_probs=25.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ..+.++++||.+||..||.+|++.     .+|..+
T Consensus       231 ~~~~~~~~li~~cl~~dp~~Rp~~-----~~il~~  260 (262)
T cd05077         231 PSCKELADLMTHCMNYDPNQRPFF-----RAIMRD  260 (262)
T ss_pred             CChHHHHHHHHHHcCCChhhCcCH-----HHHHHh
Confidence            346789999999999999999988     777654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=90.34  E-value=0.44  Score=34.18  Aligned_cols=28  Identities=21%  Similarity=0.419  Sum_probs=24.4

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..+...+.++.++|.+||..+|.+|++.
T Consensus       223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  250 (260)
T cd05073         223 PRPENCPEELYNIMMRCWKNRPEERPTF  250 (260)
T ss_pred             CCcccCCHHHHHHHHHHcccCcccCcCH
Confidence            3445688999999999999999999986

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=90.17  E-value=0.38  Score=34.39  Aligned_cols=24  Identities=17%  Similarity=0.319  Sum_probs=22.5

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      .++...+++|.+||..+|.+|++.
T Consensus       232 ~~~~~~~~~i~~cl~~~p~~Rp~~  255 (267)
T cd08224         232 HYSEELRDLVSRCINPDPEKRPDI  255 (267)
T ss_pred             hcCHHHHHHHHHHcCCCcccCCCH
Confidence            678899999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=90.14  E-value=0.51  Score=33.88  Aligned_cols=32  Identities=25%  Similarity=0.368  Sum_probs=26.5

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ..+...+....++|.+||..+|..|++.     .+|.
T Consensus       230 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~-----~~i~  261 (268)
T cd05063         230 PAPMDCPSAVYQLMLQCWQQDRARRPRF-----VDIV  261 (268)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHH
Confidence            3345578899999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=90.13  E-value=0.39  Score=34.42  Aligned_cols=29  Identities=14%  Similarity=0.221  Sum_probs=25.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..+...++||.+||..+|.+|++.     .+|..
T Consensus       232 ~~~~~~~~li~~cl~~~p~~Rp~~-----~~vl~  260 (267)
T cd08228         232 HYSEKLRELVSMCIYPDPDQRPDI-----GYVHQ  260 (267)
T ss_pred             hcCHHHHHHHHHHCCCCcccCcCH-----HHHHH
Confidence            567889999999999999999987     77654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=90.10  E-value=0.32  Score=36.83  Aligned_cols=36  Identities=14%  Similarity=0.282  Sum_probs=30.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..++++..+++.+||..+|.+|++.     .+|..|
T Consensus       300 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~-----~eil~~  335 (343)
T cd05103         300 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-----SELVEH  335 (343)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            344566788999999999999999999988     788765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=89.98  E-value=0.24  Score=36.18  Aligned_cols=35  Identities=17%  Similarity=0.298  Sum_probs=28.2

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ..+|...+.+..++|.+||..+|.+|++.     .+|..+
T Consensus       238 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~-----~~il~~  272 (274)
T cd05076         238 HRLPEPSCKELATLISQCLTYEPTQRPSF-----RTILRD  272 (274)
T ss_pred             cCCCCCCChHHHHHHHHHcccChhhCcCH-----HHHHHh
Confidence            34555567889999999999999999987     777643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=89.94  E-value=0.34  Score=36.72  Aligned_cols=35  Identities=14%  Similarity=0.273  Sum_probs=29.2

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ...|...+.++.+++.+||+.+|.+|++.     .+|..|
T Consensus       295 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~-----~ell~~  329 (337)
T cd05054         295 MRAPEYATPEIYSIMLDCWHNNPEDRPTF-----SELVEI  329 (337)
T ss_pred             CCCCccCCHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            34456678999999999999999999987     777654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=89.78  E-value=0.5  Score=33.98  Aligned_cols=29  Identities=7%  Similarity=0.153  Sum_probs=25.4

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .++.++.++|.+||..||.+|++.     .++.+
T Consensus       237 ~~~~~l~~li~~cl~~~p~~Rp~~-----~e~~~  265 (269)
T cd08528         237 MYSEDVTDVITSCLTPDAEARPDI-----IQVSA  265 (269)
T ss_pred             cCCHHHHHHHHHHCCCCCccCCCH-----HHHHH
Confidence            578999999999999999999987     66654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=89.64  E-value=0.42  Score=36.87  Aligned_cols=34  Identities=21%  Similarity=0.333  Sum_probs=28.3

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....|..++.+++++|.+||..+|.+|++.     .+|.
T Consensus       333 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~-----~~l~  366 (374)
T cd05106         333 QMSRPDFAPPEIYSIMKMCWNLEPTERPTF-----SQIS  366 (374)
T ss_pred             CccCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            344566789999999999999999999987     6664

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=89.31  E-value=0.66  Score=33.62  Aligned_cols=34  Identities=12%  Similarity=0.151  Sum_probs=28.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....+...+.+..++|.+||..||.+|++.     .++.
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~-----~~l~  262 (279)
T cd05109         229 RLPQPPICTIDVYMIMVKCWMIDSECRPRF-----RELV  262 (279)
T ss_pred             cCCCCccCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            344556788999999999999999999988     7776

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=89.16  E-value=0.32  Score=35.36  Aligned_cols=33  Identities=15%  Similarity=0.379  Sum_probs=27.5

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..+..++.+..+||.+||..+|.+|+++     .+|..
T Consensus       246 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~ei~~  278 (284)
T cd05081         246 PAPPGCPAEIYAIMKECWNNDPSQRPSF-----SELAL  278 (284)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCH-----HHHHH
Confidence            3445688999999999999999999987     66653

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=88.89  E-value=0.33  Score=35.62  Aligned_cols=30  Identities=10%  Similarity=0.082  Sum_probs=25.9

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +...+..+++||.+||..+|.+|++.     .+|.
T Consensus       261 ~~~~~~~l~~li~~~l~~~p~~RPs~-----~~i~  290 (295)
T cd05097         261 TPLCPSPVFKLMMRCWSRDIKDRPTF-----NKIH  290 (295)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCH-----HHHH
Confidence            45678999999999999999999988     6663

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=88.75  E-value=0.72  Score=33.43  Aligned_cols=30  Identities=13%  Similarity=0.176  Sum_probs=26.2

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      .+..|...+.++.++|.+||..+|.+|++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~  258 (279)
T cd05057         229 RLPQPPICTIDVYMVLVKCWMIDAESRPTF  258 (279)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCCCH
Confidence            455666788999999999999999999987

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=88.70  E-value=0.39  Score=34.95  Aligned_cols=31  Identities=16%  Similarity=0.207  Sum_probs=26.6

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      .|..++.+.+++|.+||..+|++|++.     .+|.
T Consensus       245 ~~~~~~~~~~~li~~cl~~~p~~Rps~-----~~i~  275 (283)
T cd05080         245 CPKNCPQEVYILMKNCWETEAKFRPTF-----RSLI  275 (283)
T ss_pred             CCCCCCHHHHHHHHHHhccChhhCCCH-----HHHH
Confidence            456678999999999999999999988     6664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=88.69  E-value=0.35  Score=35.67  Aligned_cols=30  Identities=20%  Similarity=0.209  Sum_probs=26.3

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhh
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI   51 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i   51 (126)
                      .|..++..+++||.+||..+|.+|++.     .+|
T Consensus       269 ~~~~~~~~~~~li~~cl~~~p~~RPs~-----~~i  298 (304)
T cd05096         269 RPPPCPQGLYELMLQCWSRDCRERPSF-----SDI  298 (304)
T ss_pred             CCCCCCHHHHHHHHHHccCCchhCcCH-----HHH
Confidence            345678999999999999999999998     776

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=87.60  E-value=0.55  Score=34.49  Aligned_cols=26  Identities=15%  Similarity=0.286  Sum_probs=23.5

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      |..++...++||.+||..||.+|++.
T Consensus       262 ~~~~~~~~~~li~~cl~~~p~~Rp~~  287 (296)
T cd05095         262 PALCPDSLYKLMLSCWRRNAKERPSF  287 (296)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCH
Confidence            45678999999999999999999987

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=87.54  E-value=0.6  Score=36.60  Aligned_cols=35  Identities=11%  Similarity=0.247  Sum_probs=29.3

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .+..|..++.++++||.+|+..+|.+|++.     .+|..
T Consensus       360 ~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-----~ell~  394 (401)
T cd05107         360 RMAKPAHASDEIYEIMQKCWEEKFEIRPDF-----SQLVH  394 (401)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhHCcCH-----HHHHH
Confidence            345667789999999999999999999987     77654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=87.47  E-value=0.68  Score=36.28  Aligned_cols=29  Identities=17%  Similarity=0.405  Sum_probs=25.5

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +..|..++.+++++|.+||..+|.+|++.
T Consensus       359 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~  387 (400)
T cd05105         359 MAKPDHATQEVYDIMVKCWNSEPEKRPSF  387 (400)
T ss_pred             CCCCccCCHHHHHHHHHHCccCHhHCcCH
Confidence            44566788999999999999999999987

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1035|consensus

Probab=87.26  E-value=0.74  Score=41.21  Aligned_cols=32  Identities=19%  Similarity=0.279  Sum_probs=29.3

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      -+..+.+|..||..||.+|+++     .+++.+.||.
T Consensus       844 ~~~e~slI~~Ll~hdP~kRPtA-----~eLL~s~llp  875 (1351)
T KOG1035|consen  844 HPEEASLIRWLLSHDPSKRPTA-----TELLNSELLP  875 (1351)
T ss_pred             chHHHHHHHHHhcCCCccCCCH-----HHHhhccCCC
Confidence            3678899999999999999998     9999999998

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=87.14  E-value=0.87  Score=32.76  Aligned_cols=34  Identities=15%  Similarity=0.236  Sum_probs=27.7

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +..|..++..+.++|.+||..+|.+|++.     .+|..
T Consensus       230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i~~  263 (269)
T cd05065         230 LPPPMDCPTALHQLMLDCWQKDRNARPKF-----GQIVS  263 (269)
T ss_pred             CCCcccCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            34455678899999999999999999987     66653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=87.04  E-value=0.94  Score=32.63  Aligned_cols=31  Identities=19%  Similarity=0.357  Sum_probs=26.0

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      .|...+.+..+|+.+||..+|.+|+++     .+|.
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~ei~  277 (284)
T cd05038         247 RPPSCPDEVYDLMKLCWEAEPQDRPSF-----ADLI  277 (284)
T ss_pred             CCccCCHHHHHHHHHHhccChhhCCCH-----HHHH
Confidence            345667899999999999999999987     6654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=87.00  E-value=0.72  Score=34.28  Aligned_cols=36  Identities=11%  Similarity=0.148  Sum_probs=29.8

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      .+..|...+.+..++|.+||..+|.+|++.     .+|..+
T Consensus       229 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-----~~l~~~  264 (316)
T cd05108         229 RLPQPPICTIDVYMIMVKCWMIDADSRPKF-----RELIIE  264 (316)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            344556788999999999999999999988     777765

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0591|consensus

Probab=85.57  E-value=0.99  Score=34.67  Aligned_cols=39  Identities=23%  Similarity=0.366  Sum_probs=33.0

Q ss_pred             hHHHHHHhcCCCcc-cCC-CCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183           2 QTYNMIINVGIDKI-PFP-KHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus         2 ~l~~~I~~~~~~~~-~~p-~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +|.++|. +|  .+ ..| ...|.+...||..|+..|+..|++.
T Consensus       235 ~L~~KI~-qg--d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  235 SLCKKIE-QG--DYPPLPDEHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHHHH-cC--CCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence            5778898 77  44 477 6789999999999999999999974

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=82.34  E-value=2.1  Score=31.15  Aligned_cols=34  Identities=9%  Similarity=0.086  Sum_probs=27.4

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +..|...+.+..++|.+|+..+|.+|++.     .++..
T Consensus       230 ~~~~~~~~~~~~~li~~c~~~~p~~Rps~-----~el~~  263 (279)
T cd05111         230 LAQPQICTIDVYMVMVKCWMIDENVRPTF-----KELAN  263 (279)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHH
Confidence            34445567899999999999999999998     67643

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=82.30  E-value=1.1  Score=30.00  Aligned_cols=28  Identities=21%  Similarity=0.382  Sum_probs=24.3

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhccCC
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKKHK   55 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp   55 (126)
                      ....++|.+||..+|.+|++.     .++..|+
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~-----~~l~~~~  215 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSA-----KEILEHL  215 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCH-----HHHhhCC
Confidence            578899999999999999987     7887664

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	126
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		7e-14
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		8e-14
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		8e-14
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		8e-14
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		8e-14
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		8e-14
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-14
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		8e-14
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		8e-14
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		8e-14
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		8e-14
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		8e-14
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-14
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		8e-14
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		8e-14
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		8e-14
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-14
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		8e-14
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		8e-14
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		9e-14
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		9e-14
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		9e-14
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		9e-14
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		9e-14
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		9e-14
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		9e-14
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		9e-14
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		9e-14
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		9e-14
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		9e-14
4ae6_A	343	Structure And Function Of The Human Sperm-specific		9e-14
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		9e-14
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		9e-14
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		9e-14
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		9e-14
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		9e-14
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		9e-14
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		9e-14
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		9e-14
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		9e-14
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		9e-14
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		9e-14
4ae9_A	343	Structure And Function Of The Human Sperm-specific		9e-14
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-13
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-13
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-13
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-13
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-13
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-13
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-13
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		5e-13
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-12
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		1e-11
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		1e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-11
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-11
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-10
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-09
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		3e-09
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-09
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-09
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		5e-09
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-09
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		5e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		5e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-09
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-09
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-09
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-09
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		9e-09
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		9e-09
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-08
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-08
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-08
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-08
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-08
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-08
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		6e-08
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-08
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-08
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		7e-08
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		7e-08
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		8e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		8e-08
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		8e-08
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-07
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		6e-05
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		9e-05
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-04
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		7e-04
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		8e-04

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 231 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 287
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 288 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 320

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 237 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 293
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 294 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 326

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 239 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 295
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 296 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 328

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 265 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 321
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 322 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 354

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 265 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 321
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 322 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 354

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 237 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 293
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 294 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 326

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 265 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 321
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 322 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 354

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 230 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATT 286
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 287 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 319

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DI  HKWF   
Sbjct: 245 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATT 301
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 302 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 334

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +  G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSNFD Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G    G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATT 300
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAE 93
           DW  +  + +  P IP  KGP DTSN D Y  E
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNADDYEEE 333

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
Query: 1   MQTYNMIINVGIDKIPFPKHVT---RTAQSLIKAL-CKESPAERLGYQRGGIVDIKKHKW 56
           ++TY  I+N   ++  FP HVT     A+ LI+ L C  S   RLG  + GI D KKH +
Sbjct: 303 VETYGKIMNHE-ERFQFPSHVTDVSEEAKDLIQRLIC--SRERRLG--QNGIEDFKKHAF 357
Query: 57  FQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           F+G +W+ +RN  L  P IP +  P+DTSNFD
Sbjct: 358 FEGLNWENIRN--LEAPYIPDVSSPSDTSNFD 387

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
Query: 1   MQTYNMIINVGIDKIPFPKHVT---RTAQSLIKAL-CKESPAERLGYQRGGIVDIKKHKW 56
           ++TY  I+N   ++  FP HVT     A+ LI+ L C  S   RLG  + GI D KKH +
Sbjct: 287 VETYGKIMNHE-ERFQFPSHVTDVSEEAKDLIQRLIC--SRERRLG--QNGIEDFKKHAF 341
Query: 57  FQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           F+G +W+ +RN  L  P IP +  P+DTSNFD
Sbjct: 342 FEGLNWENIRN--LEAPYIPDVSSPSDTSNFD 371

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +T  MI+     K+  P+ ++  AQSL++ L K +PA RLG    G+ +IK+H +F   D
Sbjct: 233 ETMTMILKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           W+ L  + + PP  P    P DT  FD
Sbjct: 290 WNKLYRREIHPPFKPATGRPEDTFYFD 316

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +T  +I+     K+  P+ ++  AQSL++AL K +PA RLG    G  +IK+H ++   D
Sbjct: 237 ETMTLILKA---KLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTID 293
Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           W+ L  + + PP  P +  P DT  FD
Sbjct: 294 WNKLYRREIKPPFKPAVAQPDDTFYFD 320

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 1   MQTYNMIINVGIDKIPFPKHVT---RTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 57
           ++TY  I+N   ++  FP  VT     A+ LI+ L   S   RLG  + GI D KKH +F
Sbjct: 287 VETYGKIMNHK-ERFQFPTQVTDVSENAKDLIRRLIC-SREHRLG--QNGIEDFKKHPFF 342
Query: 58  QGFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
            G DWD +RN     P IP +  PTDTSNFD
Sbjct: 343 SGIDWDNIRN--CEAPYIPEVSSPTDTSNFD 371

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +PK +++ A S+ K L  + PA+RLG    G  D+++H +F+  DW+ L N+ + PP 
Sbjct: 237 VSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPF 296
Query: 75  IPVIKGPTDTSNFDRY 90
            P + G     NFD++
Sbjct: 297 KPKVCG-KGAENFDKF 311

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 14  KIPFPKHVTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGFDWDGLRNQTLTP 72
           +I  P+ ++  A S++K+   + P ERLG + + G  DI+ H +F+  DWD +  + + P
Sbjct: 278 QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVP 337
Query: 73  PIIPVIKGPTDTSNFD-RYSAE--------NDIKGPTDTSNFDRYSAEN 112
           P  P I G     NFD +++ E        +DI    D S F+ +   N
Sbjct: 338 PFKPNISGEFGLDNFDSQFTNEPVQLXPDDDDIVRKIDQSEFEGFEYIN 386

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 12  IDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLT 71
           +++I FP+ +   A+SL+  L K+ P +RLG       +I +H++F G  W  +  + L+
Sbjct: 363 MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLS 422
Query: 72  PPIIPVIKGPTDTSNFD 88
           PP  P +   TDT  FD
Sbjct: 423 PPFKPQVTSETDTRYFD 439

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 12  IDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLT 71
           +++I FP+ +   A+SL+  L K+ P +RLG       +I +H++F G  W  +  + L+
Sbjct: 366 MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLS 425
Query: 72  PPIIPVIKGPTDTSNFD 88
           PP  P +   TDT  FD
Sbjct: 426 PPFKPQVTSETDTRYFD 442

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 30  KALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           + LC   P  RLG  RGG  D + H +F G DWDGLR+    PP  P  +G TDT NFD
Sbjct: 308 RLLC--PPETRLG--RGGAGDFRTHPFFFGLDWDGLRDS--VPPFTPDFEGATDTCNFD 360

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 3   TYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGF 60
           T + +  V ++K I  P+ ++  A S++K+   + P ERLG + + G  DI+ H +F+  
Sbjct: 219 TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 278
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFD-RYSAE--------NDIKGPTDTSNFDRYSAE 111
           DWD +  + + PP  P I G     NFD +++ E        +DI    D S F+ +   
Sbjct: 279 DWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLXPDDDDIVRKIDQSEFEGFEYI 338
Query: 112 N 112
           N
Sbjct: 339 N 339

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 3   TYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGF 60
           T + +  V ++K I  P+ ++  A S++K+   + P ERLG + + G  DI+ H +F+  
Sbjct: 223 TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFD-RYSAE--------NDIKGPTDTSNFDRYSAE 111
           DWD +  + + PP  P I G     NFD +++ E        +DI    D S F+ +   
Sbjct: 283 DWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLXPDDDDIVRKIDQSEFEGFEYI 342
Query: 112 N 112
           N
Sbjct: 343 N 343

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 14  KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPP 73
           K+  P ++T+ A+ L+K L K + A RLG   G   +++ H +F+  +W+ L  + + PP
Sbjct: 237 KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPP 296
Query: 74  IIPVIKGPTDTSNFD-RYSAENDIKGPTDTS 103
             P+++   D S FD +++ +  +  P D++
Sbjct: 297 FKPLLQSEEDVSQFDSKFTRQTPVDSPDDST 327

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 14  KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPP 73
           K+  P ++T+ A+ L+K L K + A RLG   G   +++ H +F+  +W+ L  + + PP
Sbjct: 237 KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPP 296
Query: 74  IIPVIKGPTDTSNFD-RYSAENDIKGPTDTS 103
             P+++   D S FD +++ +  +  P D++
Sbjct: 297 FKPLLQSEEDVSQFDSKFTRQTPVDSPDDST 327

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ +   A+SL+  L K+ P +RLG       +I +H++F G  W  +  + 
Sbjct: 221 ILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKK 280
Query: 70  LTPPIIPVIKGPTDTSNFD 88
           L+PP  P +   TDT  FD
Sbjct: 281 LSPPFKPQVTSETDTRYFD 299

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ +   A+SL+  L K+ P +RLG       +I +H++F G  W  +  + 
Sbjct: 222 ILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKK 281
Query: 70  LTPPIIPVIKGPTDTSNFD 88
           L+PP  P +   TDT  FD
Sbjct: 282 LSPPFKPQVTSETDTRYFD 300

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ +   A+SL+  L K+ P +RLG       +I +H++F G  W  +  + 
Sbjct: 223 ILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKK 282
Query: 70  LTPPIIPVIKGPTDTSNFD 88
           L+PP  P +   TDT  FD
Sbjct: 283 LSPPFKPQVTSETDTRYFD 301

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +PK +++ A ++ K L  + P +RLG    G  DIK+H +F+  DW+ L  + + PP 
Sbjct: 559 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPY 618
Query: 75  IPVIKGPTDTSNFDRY 90
            P   G  +  NFDR+
Sbjct: 619 KPKASG-RNAENFDRF 633

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TY  I+N    ++ FP       + L+  L     ++RLG  + G  D+K H WF+  
Sbjct: 209 MKTYEKILNA---ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
Query: 61  DWDGLRNQTL-TPPIIPVIKGPTDTSNFDRYSAEN 94
            W+ L ++ + TP   P+ +G  DTS FD+Y  E+
Sbjct: 266 VWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEED 300

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 3   TYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGF 60
           T + +  V ++K I  P+ ++  A S++K+   + P ERLG   + G  DI+ H +F+  
Sbjct: 234 TEDYLFQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNV 293
Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFD-RYSAE--------NDIKGPTDTSNFDRYSAE 111
           DWD +  + + PP  P I G     NFD +++ E        +DI    D S F+ +   
Sbjct: 294 DWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNERVQLXPDDDDIVRKIDQSEFEGFEYI 353
Query: 112 N 112
           N
Sbjct: 354 N 354

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +T  MI+     K+  P+ ++  AQSL++ L K +PA RLG    G+ +IK+H +F   D
Sbjct: 234 ETMTMILKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 290
Query: 62  WDGLRNQTLTPPIIP 76
           W+ L  + + PP  P
Sbjct: 291 WNKLYRREIHPPFKP 305

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +T  MI+     K+  P+ ++  AQSL++ L K +PA RLG    G+ +IK+H +F   D
Sbjct: 233 ETMTMILKA---KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
Query: 62  WDGLRNQTLTPPIIP 76
           W+ L  + + PP  P
Sbjct: 290 WNKLYRREIHPPFKP 304

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +PK +++ A ++ K L  + P +RLG    G  DIK+H +F+  DW+ L  + + PP 
Sbjct: 238 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPY 297
Query: 75  IPVIKGPTDTSNFDRY 90
            P   G  +  NFDR+
Sbjct: 298 KPKACG-RNAENFDRF 312

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + Y+ I+N  +   P   ++T +A+ L++ L ++   +RLG  +   ++IK H +F   +
Sbjct: 246 EMYDNILNKPLQLKP---NITNSARHLLEGLLQKDRTKRLG-AKDDFMEIKSHVFFSLIN 301
Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           WD L N+ +TPP  P + GP D  +FD
Sbjct: 302 WDDLINKKITPPFNPNVSGPNDLRHFD 328

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +W  +  + 
Sbjct: 217 ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 70  LTPPIIPVIKGPTDTSNF-DRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNW 122
           L PP  P +    DT  F D ++A++    P      DRY +   +  D+ +++
Sbjct: 277 LLPPFKPQVTSEVDTRYFDDEFTAQSITIXPP-----DRYDSLGLLELDQRTHF 325

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 16  PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPII 75
           P+P+ ++  A+ LI+ L  + P +RLG       +IK+H +FQ  +WD L  + +  P  
Sbjct: 284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFK 343
Query: 76  PVIKGPTDTSNF 87
           PVI+   D SNF
Sbjct: 344 PVIRDELDVSNF 355

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +W  +  + 
Sbjct: 217 ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 70  LTPPIIPVIKGPTDTSNF-DRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNW 122
           L PP  P +    DT  F D ++A++    P      DRY +   +  D+ +++
Sbjct: 277 LLPPFKPQVTSEVDTRYFDDEFTAQSITITPP-----DRYDSLGLLELDQRTHF 325

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +W  +  + 
Sbjct: 217 ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 70  LTPPIIPVIKGPTDTSNF-DRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNW 122
           L PP  P +    DT  F D ++A++    P      DRY +   +  D+ +++
Sbjct: 277 LLPPFKPQVTSEVDTRYFDDEFTAQSITITPP-----DRYDSLGLLELDQRTHF 325

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +W  +  + 
Sbjct: 220 ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 279
Query: 70  LTPPIIPVIKGPTDTSNF-DRYSAENDIKGPTDTSNFDRYSAENDVPPDETSNW 122
           L PP  P +    DT  F D ++A++    P      DRY +   +  D+ +++
Sbjct: 280 LLPPFKPQVTSEVDTRYFDDEFTAQSITITPP-----DRYDSLGLLELDQRTHF 328

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 9   NVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ 68
           ++ +D   +P+ + + A+ L+  L    P +RLG  RG   DI++H  F+  +W+ L  +
Sbjct: 230 SIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV-RG---DIRQHPLFREINWEELERK 285
Query: 69  TLTPPIIPVIKGPTDTSNFDR 89
            + PP  P +K P D SNFD+
Sbjct: 286 EIDPPFRPKVKSPFDCSNFDK 306

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 9   NVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ 68
           ++ +D   +P+ + + A+ L+  L    P +RLG  RG   DI++H  F+  +W+ L  +
Sbjct: 229 SIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV-RG---DIRQHPLFREINWEELERK 284
Query: 69  TLTPPIIPVIKGPTDTSNFDR 89
            + PP  P +K P D SNFD+
Sbjct: 285 EIDPPFRPKVKSPFDCSNFDK 305

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +W  +  + 
Sbjct: 222 ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 281
Query: 70  LTPPIIPVIKGPTDTSNF-DRYSAENDIKGPTD 101
           L PP  P +    DT  F D ++A++    P D
Sbjct: 282 LLPPFKPQVTSEVDTRYFDDEFTAQSITITPPD 314

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 4   YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLG-YQRGGIVDIKKHKWFQGFDW 62
           +  I+N   D++ +P  +   A  ++K+   ++P  RLG   +GG   I +H +F+  DW
Sbjct: 233 FEAILN---DEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDW 289
Query: 63  DGLRNQTLTPPIIPVIKGPTDTSNFD-RYSAENDIKGPTDTSNF 105
             L ++ + PP  P IK   D SNFD  +  E  +  P D  + 
Sbjct: 290 AQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLXPIDEGHL 333

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +W  +  + 
Sbjct: 217 ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 70  LTPPIIPVIKGPTDTSNF-DRYSAENDIKGPTD 101
           L PP  P +    DT  F D ++A++    P D
Sbjct: 277 LLPPFKPQVTSEVDTRYFDDEFTAQSITITPPD 309

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 10  VGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + +++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +W  +  + 
Sbjct: 217 ILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 70  LTPPIIPVIKGPTDTSNF-DRYSAENDIKGPTD 101
           L PP  P +    DT  F D ++A++    P D
Sbjct: 277 LLPPFKPQVTSEVDTRYFDDEFTAQSITITPPD 309

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +P   +  ++   +AL ++ P +RLG++ G    ++ H  F+   W  L    LTPP 
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPF 469
Query: 75  IP 76
           +P
Sbjct: 470 VP 471

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +P   +  ++   +AL ++ P +RLG++ G    ++ H  F+   W  L    LTPP 
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPF 469
Query: 75  IP 76
           +P
Sbjct: 470 VP 471

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +P   +  ++   +AL ++ P +RLG++ G    ++ H  F+   W  L    LTPP 
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPF 469
Query: 75  IP 76
           +P
Sbjct: 470 VP 471

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 15  IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPI 74
           + +P   +  ++   +AL ++ P +RLG++ G    ++ H  F+   W  L    LTPP 
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPF 469
Query: 75  IP 76
           +P
Sbjct: 470 VP 471

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 13/117 (11%)
Query: 3   TYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 59
           TY+ I++   + + FP+   +++ A++LI A   +    RLG  R G+ +IK+H +F+  
Sbjct: 287 TYSKIMDHK-NSLCFPEDAEISKHAKNLICAFLTDREV-RLG--RNGVEEIKQHPFFKND 342
Query: 60  -FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
            ++WD +R      P++P +    D+SNFD    E+D KG  +T    +    N +P
Sbjct: 343 QWNWDNIRET--AAPVVPELSSDIDSSNFD--DIEDD-KGDVETFPIPKAFVGNQLP 394

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 3   TYNMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 59
           TY+ I+N   + + FP    +++ A++LI A   +    RLG  R G+ +IK+H +F+  
Sbjct: 286 TYSKIMNHK-NSLTFPDDNDISKEAKNLICAFLTDREV-RLG--RNGVEEIKRHLFFKND 341
Query: 60  -FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
            + W+ LR+     P++P +    DTSNFD    E D KG  +T    +    N +P
Sbjct: 342 QWAWETLRDT--VAPVVPDLSSDIDTSNFD--DLEED-KGEEETFPIPKAFVGNQLP 393

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 3   TYNMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 59
           TY+ I+N   + + FP    +++ A++LI A   +    RLG  R G+ +IK+H +F+  
Sbjct: 286 TYSKIMNHK-NSLTFPDDNDISKEAKNLICAFLTDREV-RLG--RNGVEEIKRHLFFKND 341
Query: 60  -FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
            + W+ LR+     P++P +    DTSNFD    E D KG  +T    +    N +P
Sbjct: 342 QWAWETLRDT--VAPVVPDLSSDIDTSNFD--DLEED-KGEEETFPIPKAFVGNQLP 393

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 3   TYNMIINVGIDKIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG- 59
           TY+ I+N   + + FP    +++ A++LI A   +    RLG  R G+ +IK+H +F+  
Sbjct: 281 TYSKIMNHK-NSLTFPDDNDISKEAKNLICAFLTDREV-RLG--RNGVEEIKRHLFFKND 336
Query: 60  -FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
            + W+ LR+     P++P +    DTSNFD    E D KG  +T    +    N +P
Sbjct: 337 QWAWETLRDT--VAPVVPDLSSDIDTSNFD--DLEED-KGEEETFPIPKAFVGNQLP 388

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 12  IDKIP--FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + ++P  + +  +  A+SL   L  + PAERLG + G   ++K+H  F+  ++  L    
Sbjct: 401 VKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGM 460
Query: 70  LTPPIIPVIKGP--TDTSNFDRYSAENDIK-GPTDTSNFDRYSAENDVP 115
           L PP  P  +     D  + +++S    ++  PTD   + ++ A   VP
Sbjct: 461 LEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKF-ATGSVP 508

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 12  IDKIP--FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT 69
           + ++P  + +  +  A+SL   L  + PAERLG + G   ++K+H  F+  ++  L    
Sbjct: 401 VKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGM 460
Query: 70  LTPPIIPVIKGP--TDTSNFDRYSAENDIK-GPTDTSNFDRYSAENDVP 115
           L PP  P  +     D  + +++S    ++  PTD   + ++ A   VP
Sbjct: 461 LEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKF-ATGSVP 508

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	126
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-38
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-33
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-28
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	9e-28
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	9e-28
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-27
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-26
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-26
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-25
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-25
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-25
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-25
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-24
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-24
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-24
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	8e-24
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-23
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-23
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	5e-22
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-21
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	6e-20
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	5e-19
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-04

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  131 bits (331), Expect = 2e-38
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDT 102
           DW  +  + +  P IP  KGP DTSNFD Y  E       + 
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEK 342

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  117 bits (295), Expect = 3e-33
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TY  I+N    ++ FP       + L+  L     ++RLG  + G  D+K H WF+  
Sbjct: 209 MKTYEKILN---AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265

Query: 61  DWDGLRNQTLTPPIIPVIK-GPTDTSNFDRYSAENDIKGPTDTSNFD 106
            W+ L ++ +  P  P I+ G  DTS FD+Y  E+   G      + 
Sbjct: 266 VWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGEDPYA 312

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  105 bits (263), Expect = 4e-28
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 1   MQTYNMIINVGIDKIPFPKH--VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
           + TY+ I+N   + + FP    +++ A++LI A   +    RLG  R G+ +IK+H +F+
Sbjct: 279 VGTYSKIMN-HKNSLTFPDDNDISKEAKNLICAFLTD-REVRLG--RNGVEEIKRHLFFK 334

Query: 59  GFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVP 115
              W     +    P++P +    DTSNFD    +   KG  +T    +    N +P
Sbjct: 335 NDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEED---KGEEETFPIPKAFVGNQLP 388

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  103 bits (258), Expect = 9e-28
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +T  MI+     K+  P+ ++  AQSL++ L K +PA RLG    G+ +IK+H +F   D
Sbjct: 233 ETMTMILK---AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           W+ L  + + PP  P    P DT  FD 
Sbjct: 290 WNKLYRREIHPPFKPATGRPEDTFYFDP 317

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  103 bits (258), Expect = 9e-28
 Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 4/103 (3%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +T + I+     K+  P ++T+ A+ L+K L K + A RLG   G   +++ H +F+  +
Sbjct: 228 KTIDKILK---CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDR-YSAENDIKGPTDTS 103
           W+ L  + + PP  P+++   D S FD  ++ +  +  P D++
Sbjct: 285 WEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDST 327

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  101 bits (255), Expect = 3e-27
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +    I+     + P+P+ ++  A+ LI+ L  + P +RLG       +IK+H +FQ  +
Sbjct: 273 EISRRILK---SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNF 87
           WD L  + +  P  PVI+   D SNF
Sbjct: 330 WDDLAAKKVPAPFKPVIRDELDVSNF 355

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 99.6 bits (249), Expect = 2e-26
 Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + Y+ I+N     +    ++T +A+ L++ L ++   +RLG +    ++IK H +F   +
Sbjct: 246 EMYDNILN---KPLQLKPNITNSARHLLEGLLQKDRTKRLGAK-DDFMEIKSHVFFSLIN 301

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           WD L N+ +TPP  P + GP D  +FD 
Sbjct: 302 WDDLINKKITPPFNPNVSGPNDLRHFDP 329

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 98.1 bits (245), Expect = 7e-26
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + + +I+    ++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   +
Sbjct: 212 RLFELILM---EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           W  +  + L PP  P +    DT  FD 
Sbjct: 269 WQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 97.3 bits (243), Expect = 2e-25
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQGF 60
             +  I+N   D++ +P  +   A  ++K+   ++P  RLG   +GG   I +H +F+  
Sbjct: 231 DLFEAILN---DEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           DW  L ++ + PP  P IK   D SNFD 
Sbjct: 288 DWAQLNHRQIEPPFRPRIKSREDVSNFDP 316

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 97.5 bits (243), Expect = 2e-25
 Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 13/121 (10%)

Query: 2   QTYNMIINVGIDKIPFP---KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
           +TY  I++   + +  P   + V   A+  I+ L    P  RLG  RGG  D + H +F 
Sbjct: 277 ETYGKIVH-YKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLG--RGGAGDFRTHPFFF 332

Query: 59  GFDWDGLRNQTLTPPIIPVIKGPTDTSNFD----RYSAENDIKGPTDTSNFDRYSAENDV 114
           G DWDGLR+    PP  P  +G TDT NFD      +A     G T +   +       +
Sbjct: 333 GLDWDGLRDS--VPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHL 390

Query: 115 P 115
           P
Sbjct: 391 P 391

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 97.1 bits (242), Expect = 5e-25
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + + +I+    ++I FP+ +   A+SL+  L K+ P +RLG       +I +H++F G  
Sbjct: 356 KLFELILM---EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 412

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           W  +  + L+PP  P +   TDT  FD 
Sbjct: 413 WQHVYEKKLSPPFKPQVTSETDTRYFDE 440

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 95.4 bits (238), Expect = 8e-25
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQGF 60
             + +I+     +I  P+ ++  A S++K+   + P ERLG   + G  DI+ H +F+  
Sbjct: 226 YLFQVILE---KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           DWD +  + + PP  P I G     NFD 
Sbjct: 283 DWDMMEQKQVVPPFKPNISGEFGLDNFDS 311

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 96.0 bits (239), Expect = 1e-24
 Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 9/93 (9%)

Query: 1   MQTYNMIINVGIDKIPFPKH---VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF 57
           ++TY  I+N   ++  FP     V+  A+ LI+ L   S   RLG  + GI D KKH +F
Sbjct: 287 VETYGKIMN-HKERFQFPTQVTDVSENAKDLIRRLIC-SREHRLG--QNGIEDFKKHPFF 342

Query: 58  QGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRY 90
            G DWD +RN     P IP +  PTDTSNFD  
Sbjct: 343 SGIDWDNIRN--CEAPYIPEVSSPTDTSNFDVD 373

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 94.2 bits (235), Expect = 2e-24
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + ++ I     D   +P+ + + A+ L+  L    P +RLG +     DI++H  F+  +
Sbjct: 225 ELFHSIRM---DNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG----DIRQHPLFREIN 277

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           W+ L  + + PP  P +K P D SNFD+
Sbjct: 278 WEELERKEIDPPFRPKVKSPFDCSNFDK 305

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 94.7 bits (236), Expect = 2e-24
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQGF 60
             + +I+     +I  P+ ++  A S++K+   + P ERLG   + G  DI+ H +F+  
Sbjct: 269 YLFQVILE---KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           DWD +  + + PP  P I G     NFD 
Sbjct: 326 DWDMMEQKQVVPPFKPNISGEFGLDNFDS 354

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 92.7 bits (231), Expect = 8e-24
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + +  I+      + +PK +++ A ++ K L  + P +RLG    G  DIK+H +F+  D
Sbjct: 228 ELFQSIME---HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 284

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           W+ L  + + PP  P   G  +  NFDR
Sbjct: 285 WEKLERKEIQPPYKPKACGR-NAENFDR 311

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 92.8 bits (230), Expect = 2e-23
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           + +  I+      + +PK +++ A ++ K L  + P +RLG    G  DIK+H +F+  D
Sbjct: 549 ELFQSIME---HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 605

Query: 62  WDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
           W+ L  + + PP  P   G  +  NFDR
Sbjct: 606 WEKLERKEIQPPYKPKASG-RNAENFDR 632

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 91.5 bits (227), Expect = 7e-23
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +   M +      +  P   +   +SL++ L +     RLG    G  ++K+  +F+  D
Sbjct: 401 EIDRMTLT---MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457

Query: 62  WDGLRNQTLTPPIIPVIKGP-----TDTSNFDRYSAENDIKGPTDTSNFDRYS 109
           W  +  Q   PP+IP           D  +FD    +      +D   +  + 
Sbjct: 458 WQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFP 510

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 89.1 bits (221), Expect = 5e-22
 Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 6/109 (5%)

Query: 4   YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD 63
             ++         + +  +  A+SL   L  + PAERLG + G   ++K+H  F+  ++ 
Sbjct: 398 ERLVKE---VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK 454

Query: 64  GLRNQTLTPPIIPVIKGP--TDTSNFDRYSAENDIKG-PTDTSNFDRYS 109
            L    L PP  P  +     D  + +++S    ++  PTD   + +++
Sbjct: 455 RLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFA 503

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 85.6 bits (212), Expect = 8e-21
 Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 10/113 (8%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
           +    ++      + +P   +  ++   +AL ++ P +RLG++ G    ++ H  F+   
Sbjct: 400 ELKQRVLE---QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456

Query: 62  WDGLRNQTLTPPIIPVIKGP-----TDTSNFDRYSAENDIKGPTDTSNFDRYS 109
           W  L    LTPP +P  +        D   F   + +       DT  F  ++
Sbjct: 457 WRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFS--TVKGVAFEKADTEFFQEFA 507

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 82.8 bits (205), Expect = 6e-20
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            +  +         + +P   ++   SL+K L + +P +R       + D++   +    
Sbjct: 226 KEIVHTFET---TVVTYPSAWSQEMVSLLKKLLEPNPDQRFS----QLSDVQNFPYMNDI 278

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFD 88
           +WD +  + L P  IP         N D
Sbjct: 279 NWDAVFQKRLIPGFIP----NKGRLNCD 302

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 79.2 bits (196), Expect = 5e-19
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQG 59
              +  II     +  FP+     A+ L++ L      +RLG  +  G   +K H +F+ 
Sbjct: 238 YLIFQKIIK---LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294

Query: 60  FDWDGLRNQTLTPPIIP 76
             W+ L  Q  TPP + 
Sbjct: 295 VTWENLHQQ--TPPKLT 309

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 14/80 (17%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            +T+  I+NV    + FP  ++  ++ LI  L +  P +RL      +  + +H W +  
Sbjct: 218 TETHRRIVNV---DLKFPPFLSDGSKDLISKLLRYHPPQRL-----PLKGVMEHPWVKAN 269

Query: 61  DWDGLRNQTLTPPIIPVIKG 80
                 ++ + PP+    + 
Sbjct: 270 ------SRRVLPPVYQSTQS 283

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 51.1 bits (123), Expect = 8e-09
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            +TY  I  V   +  FP  VT  A+ LI  L K +P++R       + ++ +H W    
Sbjct: 213 QETYKRISRV---EFTFPDFVTEGARDLISRLLKHNPSQRP-----MLREVLEHPWITAN 264

Query: 61  DWDGLRNQT 69
                  Q 
Sbjct: 265 SSKPSNCQN 273

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 46.1 bits (110), Expect = 4e-07
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 10/96 (10%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ-G 59
            +TY  I      +   PKH+   A SLI+ + +  P  R       I ++   ++F  G
Sbjct: 247 KETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARP-----TINELLNDEFFTSG 298

Query: 60  FDWDGLRNQTLT-PPIIPVIKGPTDTSNFDRYSAEN 94
           +    L    LT PP   +     D SN    +  N
Sbjct: 299 YIPARLPITCLTIPPRFSIAPSSLDPSNRKPLTVLN 334

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
             T N ++         P  ++  A+ LI  L + +PA+RL      +  +  H +  
Sbjct: 218 KNTLNKVVLA---DYEMPSFLSIEAKDLIHQLLRRNPADRL-----SLSSVLDHPFMS 267

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 10/113 (8%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            Q Y+          P+ K +     +L+  +  E+P+ R+      I DIKK +W+   
Sbjct: 215 CQEYSDWKEKKTYLNPW-KKIDSAPLALLHKILVENPSARIT-----IPDIKKDRWYN-- 266

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAEND 113
               L+     P +       + +       +  D       S         +
Sbjct: 267 --KPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSASRTPGSGWSKE 317

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 5/52 (9%)

Query: 16  PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRN 67
                ++      +K   +++PAER+        D  KH+W    + + LR 
Sbjct: 290 CSNNFLSNEDIDFLKLFLRKNPAERIT-----SEDALKHEWLADTNIEDLRE 336

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 10/79 (12%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ-G 59
            +TY  I      +   PKH+   A SLI+ + +  P  R       I ++   ++F  G
Sbjct: 221 KETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARP-----TINELLNDEFFTSG 272

Query: 60  FDWDGLRNQTLT-PPIIPV 77
           +    L    LT PP   +
Sbjct: 273 YIPARLPITCLTIPPRFSI 291

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
           +   + II+    +I FP    +  Q ++K   K  P +R+      I ++  H + Q
Sbjct: 246 ISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPELLAHPYVQ 297

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
            Q Y+          P+ K +     +L+  +  E+P+ R+      I DIKK +W+ 
Sbjct: 215 CQEYSDWKEKKTYLNPW-KKIDSAPLALLHKILVENPSARIT-----IPDIKKDRWYN 266

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 5/51 (9%), Positives = 15/51 (29%), Gaps = 5/51 (9%)

Query: 8   INVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
           +  G     F   ++   +S++  + +  P  R          +      +
Sbjct: 264 LRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRA-----TAEALLALPVLR 309

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
           +   + II+    +I FP    +  Q ++K   K  P +R+      I ++  H + Q
Sbjct: 227 ISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPELLAHPYVQ 278

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 6/61 (9%), Positives = 22/61 (36%), Gaps = 12/61 (19%)

Query: 17  FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP 76
             K++ +  ++L++   +    +RL           +   ++       + +T     +P
Sbjct: 328 SCKNIPQPVRALLEGFLRYPKEDRLLPL-----QAMETPEYE-------QLRTELSAALP 375

Query: 77  V 77
           +
Sbjct: 376 L 376

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 36.9 bits (86), Expect = 7e-04
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 9/61 (14%)

Query: 16  PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPII 75
             P +++   ++L+K     +P +R       +  I K +W       G     L P + 
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRGT-----LEQIMKDRWINA----GHEEDELKPFVE 282

Query: 76  P 76
           P
Sbjct: 283 P 283

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 36.7 bits (85), Expect = 8e-04
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
           +   + II+    +I FP    +  Q ++K   K  P +R+      I ++  H + Q
Sbjct: 274 ISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPELLAHPYVQ 325

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	126
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.83
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.82
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.81
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.81
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.8
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.8
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.77
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.77
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.76
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.76
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.71
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.68
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.66
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.64
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.61
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.58
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.55
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.54
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.47
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.45
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.33
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.33
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	98.69
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.58
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.58
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.53
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.51
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.46
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.45
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	98.45
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.37
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.36
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.33
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.3
3niz_A	311	Rhodanese family protein; structural genomics, str	98.29
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.28
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.26
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.26
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.26
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.24
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	98.24
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.23
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.21
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.19
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.18
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.14
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.14
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.14
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.13
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.13
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.11
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.1
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.07
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.05
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.03
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.03
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.02
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.02
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	97.99
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	97.98
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	97.96
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	97.95
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	97.94
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	97.94
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	97.93
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	97.92
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	97.92
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	97.91
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.9
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	97.9
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	97.9
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	97.89
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	97.88
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	97.87
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	97.87
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	97.87
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	97.85
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	97.85
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	97.85
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	97.84
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	97.84
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	97.84
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	97.84
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	97.83
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	97.82
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	97.81
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	97.81
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	97.81
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	97.81
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	97.79
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	97.79
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	97.78
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	97.77
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	97.77
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	97.77
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	97.76
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	97.76
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	97.75
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	97.74
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	97.74
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	97.74
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	97.74
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	97.73
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.73
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	97.72
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	97.72
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	97.71
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	97.71
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	97.71
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	97.69
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	97.69
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	97.68
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	97.67
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	97.66
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	97.65
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	97.65
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	97.65
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.65
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	97.64
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	97.63
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	97.63
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	97.61
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	97.61
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.6
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.59
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	97.59
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	97.56
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	97.56
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	97.56
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.53
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	97.53
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	97.52
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.52
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	97.51
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	97.5
3bhy_A	283	Death-associated protein kinase 3; death associate	97.49
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	97.49
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	97.47
3fme_A	290	Dual specificity mitogen-activated protein kinase;	97.47
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	97.41
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	97.39
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	97.37
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	97.35
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	97.34
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	97.25
2dyl_A	318	Dual specificity mitogen-activated protein kinase	97.22
3an0_A	340	Dual specificity mitogen-activated protein kinase;	97.19
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	97.17
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	97.16
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	97.03
3aln_A	327	Dual specificity mitogen-activated protein kinase;	96.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	96.94
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	96.8
4aoj_A	329	High affinity nerve growth factor receptor; transf	96.66
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	96.54
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	96.48
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	96.37
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	96.02
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	96.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	95.73
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	95.63
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	95.61
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	95.6
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	95.56
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	95.53
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	95.36
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	95.26
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	95.26
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	95.26
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	95.25
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	95.25
3ork_A	311	Serine/threonine protein kinase; structural genomi	95.23
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	95.19
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	95.18
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	95.15
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	95.14
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	95.13
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	95.1
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	95.1
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	95.09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	95.09
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	95.05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	95.01
2a19_B	284	Interferon-induced, double-stranded RNA-activated	94.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	94.95
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	94.82
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	94.66
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	94.65
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	94.6
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	94.57
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	94.56
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	94.55
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	94.48
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	94.38
3pls_A	298	Macrophage-stimulating protein receptor; protein k	94.34
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	94.31
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	94.21
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	94.17
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	94.15
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	94.03
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	94.03
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	94.02
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	94.01
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	93.95
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	93.87
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	93.76
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	93.76
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	93.74
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	93.71
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	93.7
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	93.7
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	93.64
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	93.64
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	93.32
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	93.31
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	93.27
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	93.25
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	93.24
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	93.16
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	92.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	92.62
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	92.37
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	92.3
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	92.03
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	91.82
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	91.27
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	91.26
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	90.98
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	90.7
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	90.44
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	89.85
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	89.72
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	89.44
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	89.42
3uqc_A	286	Probable conserved transmembrane protein; structur	89.36
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	89.09
3q4u_A	301	Activin receptor type-1; structural genomics conso	89.01
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	88.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	88.65
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	88.02
3soc_A	322	Activin receptor type-2A; structural genomics cons	87.41
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	86.58
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	86.49
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	85.53
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	85.1
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	82.21
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	80.82

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.83  E-value=4.3e-21  Score=147.94  Aligned_cols=108  Identities=31%  Similarity=0.628  Sum_probs=95.2

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++.|+ ..  .+.+|..+|.++++||++||++||.+|+|+. ..|+.+|+.||||++++|+.+..+++.|||+|.+.+.
T Consensus       270 ~~~~i~-~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p~~~~~  346 (396)
T 4dc2_A          270 LFQVIL-EK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGE  346 (396)
T ss_dssp             HHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCCCCCCSS
T ss_pred             HHHHHh-cc--ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCcCCCCCc
Confidence            567777 44  7889999999999999999999999999974 2478999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~~~  113 (126)
                      .|++|||. |+.+....++.        ++..|.||+|.+.
T Consensus       347 ~d~~~fd~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~  387 (396)
T 4dc2_A          347 FGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEGFEYINP  387 (396)
T ss_dssp             TTGGGSCHHHHTSCCCCCCCCHHHHTTSCGGGGTTCCEECC
T ss_pred             cchhhcChhhccCCCccCCCcchhhccccccccCCcEeECc
Confidence            99999997 88877766654        3568999999875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.82  E-value=2.1e-20  Score=141.71  Aligned_cols=109  Identities=27%  Similarity=0.589  Sum_probs=96.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      +++++|+ .+  .+.+|..++.++++||++||++||.+|+++. .+|+.+|+.||||++++|..+..+++.|||+|.+.+
T Consensus       231 ~~~~~i~-~~--~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~~  307 (353)
T 3txo_A          231 DLFEAIL-ND--EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKS  307 (353)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCS
T ss_pred             HHHHHHH-cC--CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCCCC
Confidence            4678888 55  7889999999999999999999999999973 567899999999999999999999999999999999


Q ss_pred             CCCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccCCC
Q psy3183          81 PTDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAEND  113 (126)
Q Consensus        81 ~~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~~~  113 (126)
                      ..|++|||. |+.+.+..++.        ++..|.||+|.+.
T Consensus       308 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~  349 (353)
T 3txo_A          308 REDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFRNFEYVSP  349 (353)
T ss_dssp             TTCCTTSCHHHHTSCCCCCCCCTTSGGGSCGGGGTTCCEECC
T ss_pred             cccccccCcccccCCCcCCCccccccCcccccccCCceeeCc
Confidence            999999997 87777766654        3568999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.81  E-value=1.7e-20  Score=142.36  Aligned_cols=108  Identities=31%  Similarity=0.635  Sum_probs=92.5

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|+ .+  .+.+|..++.++++||.+||.+||.+|+|+...++.+|+.||||++++|+.+..+++.|||+|.+.+.
T Consensus       228 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~~~~~  304 (353)
T 2i0e_A          228 ELFQSIM-EH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR  304 (353)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCC
T ss_pred             HHHHHHH-hC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCcCCCCCCc
Confidence            4678888 55  78899999999999999999999999999877788999999999999999999999999999999887


Q ss_pred             CCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~~~  113 (126)
                       |++|||. |+.+....++.        ++..|.||+|.+.
T Consensus       305 -~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~  344 (353)
T 2i0e_A          305 -NAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFEGFSFVNS  344 (353)
T ss_dssp             ---CHHHHHHHHSCCCCCCCCHHHHHHSCTTTTCSCCEECT
T ss_pred             -chhhccchhccCCcccCCccccccccccccccCCCeeeCc
Confidence             9999997 66655555542        4679999999864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.81  E-value=1.4e-20  Score=153.27  Aligned_cols=108  Identities=31%  Similarity=0.646  Sum_probs=96.6

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|+ ..  .+.+|..++.++++||++||++||.+|+++...|+.+|+.||||++++|+.+..+++.|||+|.+.+ 
T Consensus       549 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~~-  624 (674)
T 3pfq_A          549 ELFQSIM-EH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG-  624 (674)
T ss_dssp             HHHHHHH-SS--CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCCG-
T ss_pred             HHHHHHH-hC--CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCCC-
Confidence            5788899 55  8899999999999999999999999999987778899999999999999999999999999999988 


Q ss_pred             CCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~~~  113 (126)
                      .|++|||. |+.+.+..++.        ++..|.||+|.+.
T Consensus       625 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~  665 (674)
T 3pfq_A          625 RNAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFEGFSFVNS  665 (674)
T ss_dssp             GGHHHHTTTTTSSCSSCCCCCHHHHTTCCGGGGTTCCEECS
T ss_pred             CchhhcCchhccCCCccCCCchhhhhcccccccCCCcccCh
Confidence            89999998 77777766654        3578999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.80  E-value=8.3e-20  Score=137.70  Aligned_cols=108  Identities=25%  Similarity=0.576  Sum_probs=91.1

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++++.|+ ..  .+.+|..+++++++||.+||..||.+|+|....++.+|+.||||++++|+.+..+++.|||+|.+.+.
T Consensus       212 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~~~~~  288 (337)
T 1o6l_A          212 RLFELIL-ME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSE  288 (337)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSST
T ss_pred             HHHHHHH-cC--CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCCCCCCCCc
Confidence            4567787 44  78899999999999999999999999998766788999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCCC---------------CCCCCCCCccCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT---------------DTSNFDRYSAEN  112 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~---------------~~~~f~~f~~~~  112 (126)
                      .|+++||. |+.+....++.               ++..|.||+|.+
T Consensus       289 ~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~  335 (337)
T 1o6l_A          289 VDTRYFDDEFTAQSITITPPDRYDSLGLLELDQREEQEMFEDFDYIA  335 (337)
T ss_dssp             TCCTTSCHHHHTSCCC--------------------CCTTTTCCEEC
T ss_pred             chhhcccchhccCccCcCCCcccccccccccccccccccCCCceecC
Confidence            99999996 66654443321               356899999975

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.80  E-value=4.2e-20  Score=150.65  Aligned_cols=108  Identities=20%  Similarity=0.381  Sum_probs=88.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      ++++.|+ ..  .+.+|..+|+++++||.+||++||.+|+|+..+|+.+|+.||||+++||+.+..+++.|||+|.+...
T Consensus       401 ~i~~~i~-~~--~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~~~~  477 (689)
T 3v5w_A          401 EIDRMTL-TM--AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEV  477 (689)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCTTCS
T ss_pred             HHHHhhc-CC--CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccCCCCCC
Confidence            4667787 44  78899999999999999999999999999877899999999999999999999999999999998877


Q ss_pred             CCCCCCCC--CCCCC---CCCCCCCCCCCCCCccCC
Q psy3183          82 TDTSNFDR--YSAEN---DIKGPTDTSNFDRYSAEN  112 (126)
Q Consensus        82 ~d~~~fd~--~~~e~---~~~~~~~~~~f~~f~~~~  112 (126)
                      .+.++||-  |..+.   ......++..|.+|+|..
T Consensus       478 ~~~~~fD~~~fd~e~~~~~~~~~~d~~~f~~Fs~~~  513 (689)
T 3v5w_A          478 NAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTI  513 (689)
T ss_dssp             STTBCCC---------CCCCCCHHHHTTTTTCCEEC
T ss_pred             CcCCCCCCccCCccccCCCCCCchHHHHHhCCCccC
Confidence            77777663  32221   223345678999999853

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.77  E-value=3.8e-19  Score=135.82  Aligned_cols=108  Identities=28%  Similarity=0.573  Sum_probs=69.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|+ ..  .+.+|..++.++++||.+||++||.+|+++. .++.+|+.||||++++|+.+..+++.|||+|.+.+.
T Consensus       246 ~~~~~i~-~~--~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~-~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p~~~~~  321 (373)
T 2r5t_A          246 EMYDNIL-NK--PLQLKPNITNSARHLLEGLLQKDRTKRLGAK-DDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGP  321 (373)
T ss_dssp             HHHHHHH-HS--CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTT-TTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCCC-
T ss_pred             HHHHHHH-hc--ccCCCCCCCHHHHHHHHHHcccCHHhCCCCC-CCHHHHhCCccccCCCHHHHHhCCCCCCCCCCCCCc
Confidence            4678888 44  7889999999999999999999999999973 678899999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCC----C----------CCCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKG----P----------TDTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~----~----------~~~~~f~~f~~~~~  113 (126)
                      .|++|||. |+.+....+    +          ..+..|.||||.+.
T Consensus       322 ~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~  368 (373)
T 2r5t_A          322 NDLRHFDPEFTEEPVPNAIGKAPDSVLVTASVKEAAEAFLGFSYAPP  368 (373)
T ss_dssp             -----------------------------------------------
T ss_pred             chhhhcCcccccccccccccCCccccccccccccccccCCCCcccCc
Confidence            99999996 776553211    1          12457999999764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.77  E-value=3.7e-19  Score=134.57  Aligned_cols=104  Identities=29%  Similarity=0.572  Sum_probs=65.9

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChh-hhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIV-DIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~-~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      +++++|. .+  .+.+|..++.++++||.+||..||.+|+++     . +|+.||||++++|+.+..+++.|||+|.+.+
T Consensus       225 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~lL~~dp~~R~~~-----~~~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~~  296 (345)
T 1xjd_A          225 ELFHSIR-MD--NPFYPRWLEKEAKDLLVKLFVREPEKRLGV-----RGDIRQHPLFREINWEELERKEIDPPFRPKVKS  296 (345)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTT-----BSCGGGSGGGTTCCHHHHHTTCSCC--------
T ss_pred             HHHHHHH-hC--CCCCCcccCHHHHHHHHHHhcCCHhHcCCC-----hHHHHcCccccCCCHHHHhhCCCCCCcCCCCCC
Confidence            4677787 44  678999999999999999999999999998     5 9999999999999999999999999999999


Q ss_pred             CCCCCCCCC-CCCCCCCCCC--------CCCCCCCCCccCCC
Q psy3183          81 PTDTSNFDR-YSAENDIKGP--------TDTSNFDRYSAEND  113 (126)
Q Consensus        81 ~~d~~~fd~-~~~e~~~~~~--------~~~~~f~~f~~~~~  113 (126)
                      ..|++|||. |+.+.+..++        .++..|.||+|.+.
T Consensus       297 ~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~  338 (345)
T 1xjd_A          297 PFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFRNFSFMNP  338 (345)
T ss_dssp             ------------------------------CCTTTTCCC---
T ss_pred             cchhhhcchhhcccCccCCcccccccccccccccCCCeeeCh
Confidence            999999996 7776554443        24678999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.76  E-value=7.9e-19  Score=132.49  Aligned_cols=108  Identities=31%  Similarity=0.628  Sum_probs=91.7

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++.|. ..  .+.+|..++.++++||.+||..||.+|+++. ..|+.+|+.||||++++|+.+..+++.|||+|.+.+.
T Consensus       227 ~~~~i~-~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~~p~~p~~~~~  303 (345)
T 3a8x_A          227 LFQVIL-EK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGE  303 (345)
T ss_dssp             HHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCTT
T ss_pred             HHHHHH-cC--CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCc
Confidence            566777 44  7889999999999999999999999999974 3467899999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCCC--------CCCCCCCCccCCC
Q psy3183          82 TDTSNFDR-YSAENDIKGPT--------DTSNFDRYSAEND  113 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~~--------~~~~f~~f~~~~~  113 (126)
                      .|+++|+. |+.+....++.        ++..|.||+|.+.
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~  344 (345)
T 3a8x_A          304 FGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEGFEYINP  344 (345)
T ss_dssp             TCGGGSCHHHHTSCSSCCCCCHHHHTTSCGGGGTTCCEECC
T ss_pred             chhhhcCcccccCcccCCCccccccccccccccCCCEeeCC
Confidence            99999997 76665544432        3568999999753

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.76  E-value=4.8e-18  Score=128.50  Aligned_cols=104  Identities=36%  Similarity=0.691  Sum_probs=88.8

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|+ .+  .+.+|..++.++++||.+||..||.+|++....++.+|+.||||++++|..+..+++.|||+|.+.+.
T Consensus       245 ~~~~~i~-~~--~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~  321 (350)
T 1rdq_E          245 QIYEKIV-SG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGP  321 (350)
T ss_dssp             HHHHHHH-HC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCST
T ss_pred             HHHHHHH-cC--CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCc
Confidence            4677888 55  78899999999999999999999999999766778999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCC--CCCCCCCC
Q psy3183          82 TDTSNFDRYSAENDIKGPT--DTSNFDRY  108 (126)
Q Consensus        82 ~d~~~fd~~~~e~~~~~~~--~~~~f~~f  108 (126)
                      .|+++||.|+.+....++.  ....|.+|
T Consensus       322 ~~~~~f~~~~~~~~~~~~~~~~~~~f~~f  350 (350)
T 1rdq_E          322 GDTSNFDDYEEEEIRVSINEKCGKEFTEF  350 (350)
T ss_dssp             TCCTTSCCCCCCCCCCCSSCCSTTTTTTC
T ss_pred             ccccccccccccccccCCCcchhhhcCCC
Confidence            9999999988766544432  23455554

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.71  E-value=2e-17  Score=123.61  Aligned_cols=93  Identities=31%  Similarity=0.630  Sum_probs=69.4

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC-C
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK-G   80 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~-~   80 (126)
                      +++++|+ ++  .+.+|..++.++++||.+||..||.+|++....++.+|+.||||++++|+.+..+.+.|||.|.+. +
T Consensus       210 ~~~~~i~-~~--~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~~~~~  286 (318)
T 1fot_A          210 KTYEKIL-NA--ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQG  286 (318)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC---
T ss_pred             HHHHHHH-hC--CCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHHHHHhCCCCCCCCCCcCCC
Confidence            4677888 55  788999999999999999999999999987666789999999999999999999999999999987 4


Q ss_pred             CCCCCCCCCCCCCCCCC
Q psy3183          81 PTDTSNFDRYSAENDIK   97 (126)
Q Consensus        81 ~~d~~~fd~~~~e~~~~   97 (126)
                      ..|+++||.+..+....
T Consensus       287 ~~d~~~f~~~~~~~~~~  303 (318)
T 1fot_A          287 QGDTSQFDKYPEEDINY  303 (318)
T ss_dssp             -------------CCCT
T ss_pred             ccchhhcCCCCcccccc
Confidence            88999999977654433

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.68  E-value=2e-17  Score=127.94  Aligned_cols=108  Identities=25%  Similarity=0.467  Sum_probs=82.7

Q ss_pred             hHHHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183           2 QTYNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      +++++|+ ++...+.+|.  .+|.++++||++||+.+| +|+|.  .++.+|+.||||++++|+.+..+++.|||+|.+.
T Consensus       280 ~~~~~i~-~~~~~~~~p~~~~~s~~~~~li~~lL~~~~-~rlgR--~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~~  355 (410)
T 3v8s_A          280 GTYSKIM-NHKNSLTFPDDNDISKEAKNLICAFLTDRE-VRLGR--NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLS  355 (410)
T ss_dssp             HHHHHHH-THHHHCCCCTTCCCCHHHHHHHHHHSSCGG-GCTTS--SCHHHHHTSGGGCCSSCCSTTGGGSCCSCCCCCS
T ss_pred             hHHHHHH-hccccccCCCcccccHHHHHHHHHHccChh-hhCCC--CCHHHHhcCccccCCCHHHHhhcccCCCCCCcCC
Confidence            4567777 3211355664  699999999999999555 45442  4569999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCC-CCC-C------CCCCCCCCCCccCCC
Q psy3183          80 GPTDTSNFDRYSAEN-DIK-G------PTDTSNFDRYSAEND  113 (126)
Q Consensus        80 ~~~d~~~fd~~~~e~-~~~-~------~~~~~~f~~f~~~~~  113 (126)
                      +..|++|||.+..+. ... .      ..++..|.||||.+.
T Consensus       356 ~~~d~~~fd~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~  397 (410)
T 3v8s_A          356 SDIDTSNFDDLEEDKGEEETFPIPKAFVGNQLPFVGFTYYSN  397 (410)
T ss_dssp             STTCCTTSCCCCSCCSCCCCCCCCSSCCCTTGGGTTCCEECC
T ss_pred             CccchhhcCCccccccccccCCCchhhcccccccccceEeCc
Confidence            999999999854332 111 1      235678999999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.66  E-value=1e-16  Score=119.96  Aligned_cols=72  Identities=38%  Similarity=0.755  Sum_probs=66.4

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCccc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP   76 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P   76 (126)
                      +++.+|+ ++  .+.+|..+|+++++||.+||++||.+|+++...++++|++||||+++||+.+..++++|||+|
T Consensus       233 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          233 ETMTMIL-KA--KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             HHHHHHH-cC--CCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence            4678888 55  788999999999999999999999999998666789999999999999999999999999998

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.64  E-value=1.7e-16  Score=122.78  Aligned_cols=106  Identities=35%  Similarity=0.567  Sum_probs=74.0

Q ss_pred             hHHHHHHhcCCCcccCC---CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCC
Q psy3183           2 QTYNMIINVGIDKIPFP---KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI   78 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p---~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~   78 (126)
                      +++.+|+ .....+.+|   ..+|.++++||++||+ +|.+|+|.  .++.+|+.||||++++|+.+.  ...|||+|.+
T Consensus       277 ~~~~~i~-~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr--~~~~ei~~Hpff~~i~w~~l~--~~~~p~~p~~  350 (412)
T 2vd5_A          277 ETYGKIV-HYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGR--GGAGDFRTHPFFFGLDWDGLR--DSVPPFTPDF  350 (412)
T ss_dssp             HHHHHHH-THHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTT--TTHHHHHTSGGGTTCCSTTST--TSCCSCCCC-
T ss_pred             HHHHHHH-hcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCC--CCHHHHhcCCCcCCCCHHHHh--hcCCCCCCcC
Confidence            3566776 321124455   5799999999999999 99999975  678999999999999999985  4569999999


Q ss_pred             CCCCCCCCCCCCCCCCCC--------CC-------CCCCCCCCCCccCCC
Q psy3183          79 KGPTDTSNFDRYSAENDI--------KG-------PTDTSNFDRYSAEND  113 (126)
Q Consensus        79 ~~~~d~~~fd~~~~e~~~--------~~-------~~~~~~f~~f~~~~~  113 (126)
                      .+..|++|||.+.++...        .+       ......|.||||.+.
T Consensus       351 ~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~  400 (412)
T 2vd5_A          351 EGATDTCNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYSCM  400 (412)
T ss_dssp             ----CCSSCC--CCCCCTTSSSSSCCTTTC-----CCTTGGGTTCCBSCC
T ss_pred             CCcccccccCcccccccccccccCCCcccccCCCccccCCCCCCCcccCc
Confidence            999999999974332110        11       123457999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.61  E-value=1.4e-15  Score=117.75  Aligned_cols=89  Identities=31%  Similarity=0.677  Sum_probs=74.9

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++..|+ ..  .+.+|..+++++++||.+||..||.+|++.....+.++++||||.+++|+.+..+++.|||+|.+.+.
T Consensus       356 ~~~~~i~-~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~~~~  432 (446)
T 4ejn_A          356 KLFELIL-ME--EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSE  432 (446)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCSST
T ss_pred             HHHHHHH-hC--CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCCccCCCCCc
Confidence            3566677 44  67899999999999999999999999997655567999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCC
Q psy3183          82 TDTSNFDR-YSAE   93 (126)
Q Consensus        82 ~d~~~fd~-~~~e   93 (126)
                      .|+++||+ |+.|
T Consensus       433 ~~~~~~~~~~~~~  445 (446)
T 4ejn_A          433 TDTRYFDEEFTAQ  445 (446)
T ss_dssp             TCCTTC-------
T ss_pred             cchhhcchhhhcC
Confidence            99999997 7764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.58  E-value=1.6e-15  Score=118.18  Aligned_cols=107  Identities=34%  Similarity=0.597  Sum_probs=76.1

Q ss_pred             hHHHHHHhcCCCcccCCC---CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCC
Q psy3183           2 QTYNMIINVGIDKIPFPK---HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI   78 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~---~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~   78 (126)
                      +++.+|+ .....+.+|.   .+|+++++||++||+.+|.+ ++.  .++.+|+.||||++++|+.+.  ++.|||+|.+
T Consensus       288 ~~~~~i~-~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r-~~r--~~~~eil~Hpff~~i~w~~l~--~~~~p~~P~~  361 (437)
T 4aw2_A          288 ETYGKIM-NHKERFQFPTQVTDVSENAKDLIRRLICSREHR-LGQ--NGIEDFKKHPFFSGIDWDNIR--NCEAPYIPEV  361 (437)
T ss_dssp             HHHHHHH-THHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGC-TTT--TTTHHHHTSGGGTTCCTTTGG--GSCCSCCCCC
T ss_pred             HHHHhhh-hccccccCCcccccCCHHHHHHHHHHhcccccc-cCC--CCHHHHhCCCccCCCCHHHHh--hCCCCCCCcC
Confidence            4566776 3212356664   48999999999999987655 332  344999999999999999984  5679999999


Q ss_pred             CCCCCCCCCCCCCC-CCCCCC---------CCCCCCCCCCccCCCC
Q psy3183          79 KGPTDTSNFDRYSA-ENDIKG---------PTDTSNFDRYSAENDV  114 (126)
Q Consensus        79 ~~~~d~~~fd~~~~-e~~~~~---------~~~~~~f~~f~~~~~~  114 (126)
                      .+..|++|||.... .....+         ......|.||||....
T Consensus       362 ~~~~d~~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~  407 (437)
T 4aw2_A          362 SSPTDTSNFDVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSC  407 (437)
T ss_dssp             SSTTCCTTSCCC------------------CCTTGGGTTCCEESSC
T ss_pred             CCccchhhcCCcccccccccCCCCCccccccccCccccCCCcCCch
Confidence            99999999987322 111111         1235589999998753

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.55  E-value=6e-15  Score=110.00  Aligned_cols=94  Identities=29%  Similarity=0.617  Sum_probs=65.4

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPT   82 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~   82 (126)
                      ++.+|+ ++  .+.+|..++.++++||.+||..||.+|+++...++.+++.||||++++|..+..+++.|||.|.+.+..
T Consensus       229 ~~~~i~-~~--~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~  305 (327)
T 3a62_A          229 TIDKIL-KC--KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEE  305 (327)
T ss_dssp             HHHHHH-HT--CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHHHTTCSCCSCCCC-----
T ss_pred             HHHHHH-hC--CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHHhhccCCCCCCCCcCChh
Confidence            456777 44  678899999999999999999999999987656789999999999999999999999999999999999


Q ss_pred             CCCCCCC-CCCCCCCCCC
Q psy3183          83 DTSNFDR-YSAENDIKGP   99 (126)
Q Consensus        83 d~~~fd~-~~~e~~~~~~   99 (126)
                      +.++|+. |+...+..++
T Consensus       306 ~~~~~~~~~~~~~~~~~~  323 (327)
T 3a62_A          306 DVSQFDSKFTRQTPVDSP  323 (327)
T ss_dssp             ------------------
T ss_pred             hhhhcchhhhccccCCCC
Confidence            9999986 6664444443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.54  E-value=1.6e-15  Score=121.15  Aligned_cols=109  Identities=19%  Similarity=0.460  Sum_probs=82.4

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC-
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG-   80 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~-   80 (126)
                      ++++.|+ ..  .+.+|..++.++++||.+||.+||.+|+++...|+.+|+.||||++++|..+..+.+.|||+|.... 
T Consensus       400 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P~~~~~  476 (543)
T 3c4z_A          400 ELKQRVL-EQ--AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTV  476 (543)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCCCSSSC
T ss_pred             HHHHHHh-hc--ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCCCcccc
Confidence            3567777 44  6789999999999999999999999999986667899999999999999999999999999998753 


Q ss_pred             -CCCCCCCCCCCCC-CCCCCCCCCCCCCCCccCCC
Q psy3183          81 -PTDTSNFDRYSAE-NDIKGPTDTSNFDRYSAEND  113 (126)
Q Consensus        81 -~~d~~~fd~~~~e-~~~~~~~~~~~f~~f~~~~~  113 (126)
                       ..+..+++.|... .....+.+...|.+|++...
T Consensus       477 ~~~~~~d~~~f~~~~~~~~~~~~~~~f~~f~~~~~  511 (543)
T 3c4z_A          477 YAKNIQDVGAFSTVKGVAFEKADTEFFQEFASGTC  511 (543)
T ss_dssp             CSCC----CCCC---CCCCCHHHHHHHHHHCCEEC
T ss_pred             ccCCchhhhhccccCCCCCCcchhhHhhcCCCCCC
Confidence             2233333333321 12334455678999988654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.47  E-value=8.8e-15  Score=117.66  Aligned_cols=107  Identities=22%  Similarity=0.405  Sum_probs=74.6

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC--
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG--   80 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~--   80 (126)
                      +++.|. ..  ...+|..+|.++++||.+||+.||.+|+|+..+++.+|+.||||++++|+.+..+.+.|||+|....  
T Consensus       397 i~~~i~-~~--~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~~~~~  473 (576)
T 2acx_A          397 VERLVK-EV--PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIY  473 (576)
T ss_dssp             HHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCCC
T ss_pred             HHHHhh-cc--cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCCccccc
Confidence            456666 43  6778899999999999999999999999886667899999999999999999999999999998653  


Q ss_pred             CCCCCCCCCCCCCC-CCCCCCCCCCCCCCccCC
Q psy3183          81 PTDTSNFDRYSAEN-DIKGPTDTSNFDRYSAEN  112 (126)
Q Consensus        81 ~~d~~~fd~~~~e~-~~~~~~~~~~f~~f~~~~  112 (126)
                      ..+..+++.|.... ....+.+...|.+|++..
T Consensus       474 ~~~~~d~~~f~~~~~~~~~~~~~~~f~~f~~~~  506 (576)
T 2acx_A          474 CKDVLDIEQFSTVKGVELEPTDQDFYQKFATGS  506 (576)
T ss_dssp             C-----------------CHHHHHHHHHHCCEE
T ss_pred             cCCcccHhhccccCCCCCCccHHHHHhhhccCC
Confidence            22333444433211 223344455666666543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.45  E-value=6.6e-14  Score=105.07  Aligned_cols=68  Identities=29%  Similarity=0.539  Sum_probs=57.8

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPI   74 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf   74 (126)
                      +++++|+ ++  .+.+|..+|+++++||.+||++||.+|+++. ..+...|++||||+++||+.|.+++  ||.
T Consensus       241 ~~~~~i~-~~--~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~--pP~  309 (311)
T 4aw0_A          241 LIFAKII-KL--EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT--PPK  309 (311)
T ss_dssp             HHHHHHH-HT--CCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSC--CCC
T ss_pred             HHHHHHH-cC--CCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCCC--CCC
Confidence            5788899 65  8899999999999999999999999999983 1244558999999999999998775  553

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.33  E-value=3e-12  Score=96.37  Aligned_cols=81  Identities=33%  Similarity=0.632  Sum_probs=67.4

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTD   83 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d   83 (126)
                      .+.++ ..  ...+|..++..+++||.+||..||.+|+++....+.+++.|+||..++|..+..++++|||.|.++...|
T Consensus       275 ~~~~~-~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~~p~~p~~~~~~d  351 (355)
T 1vzo_A          275 SRRIL-KS--EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELD  351 (355)
T ss_dssp             HHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-CC
T ss_pred             HHHHh-cc--CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCCCCCCCccccccc
Confidence            44455 33  5677888999999999999999999999765456799999999999999999999999999999998888


Q ss_pred             CCCC
Q psy3183          84 TSNF   87 (126)
Q Consensus        84 ~~~f   87 (126)
                      .+||
T Consensus       352 ~~~~  355 (355)
T 1vzo_A          352 VSNF  355 (355)
T ss_dssp             C---
T ss_pred             cccC
Confidence            8876

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.33  E-value=3.3e-12  Score=97.90  Aligned_cols=71  Identities=20%  Similarity=0.445  Sum_probs=62.1

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~   80 (126)
                      ++..+. ..  .+.+|..++.++++||.+||..||.+|++.    +.+|+.||||.+++|+.+..+++.|||+|....
T Consensus       228 ~~~~~~-~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~s~----~~~l~~hp~f~~~~w~~~~~~~~~p~~~p~~~~  298 (384)
T 4fr4_A          228 IVHTFE-TT--VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQ----LSDVQNFPYMNDINWDAVFQKRLIPGFIPNKGR  298 (384)
T ss_dssp             HHHHHH-HC--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCS----HHHHHTSGGGTTCCHHHHHTTCSCCCCCCSCCS
T ss_pred             HHHHHh-hc--ccCCCCcCCHHHHHHHHHHhcCCHhHhccc----HHHHHcChhhhcCCHHHHHhCCCCCCCCCCCCC
Confidence            344555 33  677889999999999999999999999984    499999999999999999999999999998654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=98.69  E-value=4.2e-09  Score=77.59  Aligned_cols=49  Identities=27%  Similarity=0.501  Sum_probs=44.8

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      +++++|. ++  .+.+|..+|+++++||.+||++||.+|+++     .++++||||+
T Consensus       219 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~s~-----~eil~hpw~k  267 (275)
T 3hyh_A          219 VLFKNIS-NG--VYTLPKFLSPGAAGLIKRMLIVNPLNRISI-----HEIMQDDWFK  267 (275)
T ss_dssp             HHHHHHH-HT--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHHCHHHH
T ss_pred             HHHHHHH-cC--CCCCCCCCCHHHHHHHHHHccCChhHCcCH-----HHHHcCcccc
Confidence            4678888 55  788999999999999999999999999988     9999999996

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.58  E-value=2.3e-08  Score=75.03  Aligned_cols=66  Identities=26%  Similarity=0.452  Sum_probs=54.2

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCC
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVI   78 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~   78 (126)
                      ++..|. .+  .+.++    ..+|.++++||++||..||.+|+++     .+++.||||.  +|+.+....+.+|+.|..
T Consensus       231 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~~il~hp~~~--~~~~~~~~~~~~~~~p~~  300 (342)
T 2qr7_A          231 ILARIG-SG--KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTA-----ALVLRHPWIV--HWDQLPQYQLNRQDAPHL  300 (342)
T ss_dssp             HHHHHH-HC--CCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCH-----HHHTTSHHHH--TGGGSCCSCCCCCCCHHH
T ss_pred             HHHHHc-cC--CcccCccccccCCHHHHHHHHHHCCCChhHCcCH-----HHHhcCCeec--CccccccccCCCccchhh
Confidence            455666 44  44443    5689999999999999999999998     9999999995  699888888888887753

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.58  E-value=2.3e-08  Score=76.03  Aligned_cols=38  Identities=24%  Similarity=0.382  Sum_probs=35.0

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ..+|++|+|||++||+.||.+|+++     .++++||||++++
T Consensus       323 ~~is~~a~DLl~~lL~~dP~~R~ta-----~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          323 NEVPDEAYDLLDKLLDLNPASRITA-----EEALLHPFFKDMS  360 (361)
T ss_dssp             TTCCHHHHHHHHHHTCSCTTTSCCH-----HHHHTSGGGTTC-
T ss_pred             ccCCHHHHHHHHHHCcCChhHCcCH-----HHHhcCcccCCCC
Confidence            4689999999999999999999998     9999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.53  E-value=4.1e-08  Score=75.87  Aligned_cols=53  Identities=15%  Similarity=0.239  Sum_probs=45.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCccc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP   76 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P   76 (126)
                      +.++.++++||.+||+.||.+|+++     .+++.||||+++.|..+......++..|
T Consensus       367 ~~~s~~~~dLl~~mL~~dP~~R~t~-----~e~L~Hp~f~~~~~~~~e~~~~~~~~~~  419 (458)
T 3rp9_A          367 PASSADAIHLLKRMLVFNPNKRITI-----NECLAHPFFKEVRIAEVETNATEKVRLP  419 (458)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGTTTCCGGGCCCCSSCCCCS
T ss_pred             CCCCHHHHHHHHHHhccCccccCCH-----HHHhcCHhhhhcCCCccCCCCCCCCCCC
Confidence            3569999999999999999999998     9999999999999998876655444444

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.51  E-value=8e-08  Score=72.69  Aligned_cols=59  Identities=19%  Similarity=0.278  Sum_probs=49.1

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcC
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ   68 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~   68 (126)
                      +++.+|. .+  .+.++    ..+|.++++||.+||..||.+|+++     .+++.||||.+++|.....+
T Consensus       225 ~~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~~~~~~~~~  287 (361)
T 2yab_A          225 ETLANIT-AV--SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI-----QEALRHPWITPVDTQQAMVR  287 (361)
T ss_dssp             HHHHHHH-TT--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSTTTSCSSHHHHHHH
T ss_pred             HHHHHHH-hc--CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCH-----HHHhcCcCcCCCchhhhhhc
Confidence            3566777 44  55555    5789999999999999999999998     99999999999999765543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.46  E-value=1.9e-07  Score=69.62  Aligned_cols=52  Identities=19%  Similarity=0.296  Sum_probs=45.3

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      +.++|+ .+  .+.+|..+|.++++||++||..||.+|+++     .+|+.||||.....
T Consensus       222 ~~~~i~-~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~t~-----~eil~h~~~~~~~~  273 (328)
T 3fe3_A          222 LRERVL-RG--KYRIPFYMSTDCENLLKRFLVLNPIKRGTL-----EQIMKDRWINAGHE  273 (328)
T ss_dssp             HHHHHH-HC--CCCCCTTSCHHHHHHHHHHCCSSTTTSCCH-----HHHTTCTTTTTTCT
T ss_pred             HHHHHH-hC--CCCCCCCCCHHHHHHHHHHCCCChhHCcCH-----HHHhcCHhhcCCCc
Confidence            456677 55  778899999999999999999999999998     99999999986543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.45  E-value=9.3e-08  Score=70.80  Aligned_cols=51  Identities=22%  Similarity=0.427  Sum_probs=41.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++.|. .+.....++..+++++++||.+||.+||.+|+++     .+|++||||+.
T Consensus       238 ~~~~i~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~Hp~~~~  288 (290)
T 3fpq_A          238 IYRRVT-SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSI-----KDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHT-TTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGC-
T ss_pred             HHHHHH-cCCCCCCCCccCCHHHHHHHHHHccCChhHCcCH-----HHHhcCccccC
Confidence            455565 4322345667789999999999999999999988     99999999973

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=98.45  E-value=1.1e-07  Score=76.29  Aligned_cols=55  Identities=15%  Similarity=0.267  Sum_probs=46.7

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      +++.+|+ ++  .+.++    ..+|.++++||++||++||.+|+++     .++++||||+..+|..
T Consensus       363 ~~~~~i~-~~--~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~-----~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          363 ETLRNVK-SC--DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI-----HQALEHPWLTPGNAPG  421 (573)
T ss_dssp             HHHHHHH-TT--CCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHHSTTTSCCCCTT
T ss_pred             HHHHHHH-hC--CCCCCcccccCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCcCcCCCCCCC
Confidence            4677788 54  55555    4689999999999999999999988     9999999999988864

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.37  E-value=1.5e-07  Score=72.39  Aligned_cols=44  Identities=16%  Similarity=0.308  Sum_probs=39.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRN   67 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~   67 (126)
                      +.+++++++||.+||+.||.+|+++     .++++||||+++.|.....
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~ta-----~e~L~Hp~f~~~~~~~~e~  375 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRITI-----DQALDHPYLKDVRKKKLEN  375 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHTCGGGTTTCCTTTC-
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCCH-----HHHhcChhhhhccCcccCc
Confidence            4689999999999999999999988     9999999999999986554

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.36  E-value=3.4e-07  Score=67.70  Aligned_cols=43  Identities=26%  Similarity=0.534  Sum_probs=39.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR   66 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~   66 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||.+++|..+.
T Consensus       293 ~~~~~~l~~li~~~L~~dP~~Rps~-----~e~l~hp~f~~~~~~~~~  335 (348)
T 2pml_X          293 NFLSNEDIDFLKLFLRKNPAERITS-----EDALKHEWLADTNIEDLR  335 (348)
T ss_dssp             -CCCHHHHHHHHHHCCSSGGGSCCH-----HHHHTSGGGTTCCHHHHH
T ss_pred             hhcCHHHHHHHHHHccCChhhCCCH-----HHHhcCccccCCCHHHHH
Confidence            5689999999999999999999998     999999999999998764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.33  E-value=3.2e-07  Score=69.58  Aligned_cols=51  Identities=18%  Similarity=0.266  Sum_probs=40.2

Q ss_pred             hHHHHHHhcCCCc--ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDK--IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~--~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++++.|. .. ..  +..+..+|+++++||.+||++||.+|+++     .++++||||+.
T Consensus       277 ~~~~~i~-~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta-----~e~l~Hp~~~~  329 (346)
T 4fih_A          277 KAMKMIR-DN-LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA-----AELLKHPFLAK  329 (346)
T ss_dssp             HHHHHHH-HS-SCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCH-----HHHTTCGGGGG
T ss_pred             HHHHHHH-cC-CCCCCCccccCCHHHHHHHHHHcCCChhHCcCH-----HHHhcCHhhcC
Confidence            3556666 32 12  23345799999999999999999999988     99999999973

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.30  E-value=1.5e-07  Score=69.71  Aligned_cols=38  Identities=21%  Similarity=0.437  Sum_probs=36.4

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      ++.++++||.+||..||.+|+++     .++++||||++++|+
T Consensus       291 ~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          291 LDDEGLDLLTAMLEMDPVKRISA-----KNALEHPYFSHNDFD  328 (329)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGSSSCSC
T ss_pred             cCHHHHHHHHHHccCChhhCCCH-----HHHhCCcccCCCCCC
Confidence            78999999999999999999998     999999999999996

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.29  E-value=2.8e-07  Score=67.74  Aligned_cols=40  Identities=18%  Similarity=0.301  Sum_probs=36.7

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      +.++.++++||.+||+.||.+|+++     .+++.||||++++++
T Consensus       271 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~  310 (311)
T 3niz_A          271 PGFCQEGIDLLSNMLCFDPNKRISA-----RDAMNHPYFKDLDPQ  310 (311)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTSCCH-----HHHHTSGGGTTSCTT
T ss_pred             cccCHHHHHHHHHHcCCChhHCCCH-----HHHhcCcccccCCcc
Confidence            4578999999999999999999998     999999999998864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.28  E-value=4.7e-07  Score=66.92  Aligned_cols=47  Identities=23%  Similarity=0.401  Sum_probs=39.3

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTL   70 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~   70 (126)
                      ..++..+++||.+||..||.+|+++     .+++.||||++++|..+.....
T Consensus       258 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~~ll~h~~~~~~~~~~~~~~~~  304 (327)
T 3lm5_A          258 SSVSQLATDFIQSLLVKNPEKRPTA-----EICLSHSWLQQWDFENLFHPEE  304 (327)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCH-----HHHTTCGGGCCCCTTCC-----
T ss_pred             cccCHHHHHHHHHHcCCChhhCcCH-----HHHhCCHhhcccccccccCccC
Confidence            4689999999999999999999998     9999999999999987655443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.26  E-value=4.1e-07  Score=68.73  Aligned_cols=54  Identities=22%  Similarity=0.273  Sum_probs=40.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC---ChhHHhcCCCCCCcccC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF---DWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v---~w~~l~~~~~~ppf~P~   77 (126)
                      ..+++++++||.+||+.||.+|+++     .+++.||||+.+   +|.....+.+.+||.+.
T Consensus       299 ~~~~~~~~dll~~~L~~dP~~R~t~-----~e~l~Hp~~~~~~~~~~~~~~~~~~~~~~~~~  355 (388)
T 3oz6_A          299 ADCNEEALDLLDKLLQFNPNKRISA-----NDALKHPFVSIFHNPNEEPNCDHIITIPINDN  355 (388)
T ss_dssp             CCCCHHHHHHHHHHCCSSGGGSCCH-----HHHTTSTTTTTTCCGGGCCCCSSCCCCC----
T ss_pred             ccCCHHHHHHHHHhhccCcccCCCH-----HHHhCCHHHHHhcCCccCCCCCCCCCCCcccc
Confidence            4679999999999999999999998     999999998754   45444455555566554

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.26  E-value=5.4e-07  Score=64.92  Aligned_cols=61  Identities=23%  Similarity=0.499  Sum_probs=47.4

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      +...|. ..  .+.+|..++.++++||.+||..||.+|+++     .+|+.||||+.      ..+++.||..+.
T Consensus       220 ~~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~ll~h~~~~~------~~~~~~p~~~~~  280 (284)
T 2vgo_A          220 THRRIV-NV--DLKFPPFLSDGSKDLISKLLRYHPPQRLPL-----KGVMEHPWVKA------NSRRVLPPVYQS  280 (284)
T ss_dssp             HHHHHH-TT--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHTCHHHHH------HCCCCCCCCC--
T ss_pred             HHHHHh-cc--ccCCCCcCCHHHHHHHHHHhhcCHhhCCCH-----HHHhhCHHHHh------hccccCCCcccc
Confidence            345566 43  677888999999999999999999999998     99999999962      345555665544

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.26  E-value=7.8e-07  Score=69.14  Aligned_cols=53  Identities=17%  Similarity=0.269  Sum_probs=40.8

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++++.|.+.....+..+..+|+++++||.+||++||.+|+++     .+|+.||||+.
T Consensus       354 ~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta-----~ell~Hp~~~~  406 (423)
T 4fie_A          354 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATA-----AELLKHPFLAK  406 (423)
T ss_dssp             HHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCH-----HHHTTCGGGGG
T ss_pred             HHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCH-----HHHhcCHHhcC
Confidence            355666621111233456799999999999999999999988     99999999974

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.24  E-value=7.7e-07  Score=64.95  Aligned_cols=53  Identities=30%  Similarity=0.546  Sum_probs=40.3

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      +++.|. .+  .+.+|    ..++.++++||.+||..||.+|+++     .++++||||++..+.
T Consensus       249 ~~~~i~-~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~e~l~hp~~~~~~~~  305 (316)
T 2ac3_A          249 LFESIQ-EG--KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA-----AQVLQHPWVQGCAPE  305 (316)
T ss_dssp             HHHHHH-HC--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSTTCC-----
T ss_pred             HHHHHh-cc--CcccCchhcccCCHHHHHHHHHHhhCChhhCCCH-----HHHhcChhhcCCCCc
Confidence            455565 44  55666    4689999999999999999999998     999999999987765

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=98.24  E-value=3.5e-07  Score=69.49  Aligned_cols=51  Identities=24%  Similarity=0.299  Sum_probs=42.8

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++.+|+ ++ ....+|..+|.++++||.+||++||.+|+++     .+|+.||||+.
T Consensus       232 ~~~~~i~-~~-~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~-----~e~l~hp~~~~  282 (350)
T 4b9d_A          232 NLVLKII-SG-SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSV-----NSILEKGFIAK  282 (350)
T ss_dssp             HHHHHHH-HT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSHHHHT
T ss_pred             HHHHHHH-cC-CCCCCCccCCHHHHHHHHHHccCChhHCcCH-----HHHhcCHHhhc
Confidence            4677788 44 2345677899999999999999999999987     99999999963

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.23  E-value=5.2e-07  Score=65.71  Aligned_cols=50  Identities=20%  Similarity=0.274  Sum_probs=35.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPP   73 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~pp   73 (126)
                      +.++.++.+||.+||..||.+|+++     .+++.||||+++.+.....+....|
T Consensus       255 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~~~~~~~~~~~  304 (311)
T 4agu_A          255 PNISYPALGLLKGCLHMDPTERLTC-----EQLLHHPYFENIREIEDLAKEHDKP  304 (311)
T ss_dssp             TTCCHHHHHHHHHHCCSSTTTSCCH-----HHHHTSGGGTTCC------------
T ss_pred             ccccHHHHHHHHHHccCChhhcCCH-----HHHhcChHHHhccCHHHHHHhhccH
Confidence            3588999999999999999999998     9999999999999876665554433

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.21  E-value=7.5e-07  Score=68.55  Aligned_cols=38  Identities=18%  Similarity=0.316  Sum_probs=34.9

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .+|++++|||.+||+.||.+|+++     .++++||||+.+..
T Consensus       316 ~~s~~~~dLl~~mL~~dP~~R~ta-----~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          316 GADRQALSLLGRMLRFEPSARISA-----AAALRHPFLAKYHD  353 (398)
T ss_dssp             TCCHHHHHHHHHHSCSSTTTSCCH-----HHHTTSGGGTTTCC
T ss_pred             CCCHHHHHHHHHHCcCChhHCcCH-----HHHhcCHhhCcCCC
Confidence            579999999999999999999998     99999999987654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.19  E-value=5.1e-07  Score=66.90  Aligned_cols=39  Identities=18%  Similarity=0.331  Sum_probs=33.6

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      ..++.+++||.+||++||.+|+++     .+|++||||++++|.
T Consensus       251 ~~~~~~~~li~~~L~~dP~~Rps~-----~eil~h~~~~~~~~p  289 (299)
T 4g31_A          251 QKYPCEYVMVQDMLSPSPMERPEA-----INIIENAVFEDLDFP  289 (299)
T ss_dssp             HHCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGCCC---
T ss_pred             ccCHHHHHHHHHHcCCChhHCcCH-----HHHhcCHhhCCCCCC
Confidence            457789999999999999999988     999999999999995

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.18  E-value=4.4e-07  Score=66.64  Aligned_cols=39  Identities=21%  Similarity=0.243  Sum_probs=34.9

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ++.++++||.+||..||.+|+++     .++++||||+++.|++
T Consensus       292 ~~~~~~~li~~~L~~dP~~Rpta-----~e~l~hp~f~~~~~~~  330 (330)
T 3nsz_A          292 VSPEALDFLDKLLRYDHQSRLTA-----REAMEHPYFYTVVKDQ  330 (330)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCH-----HHHHTSGGGTTCC---
T ss_pred             CCHHHHHHHHHHhcCCcccCCCH-----HHHhcCccHhhhccCC
Confidence            79999999999999999999998     9999999999998763

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.14  E-value=9.3e-07  Score=67.24  Aligned_cols=43  Identities=23%  Similarity=0.343  Sum_probs=38.4

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ++..+++++++||.+||..||.+|+++     .+++.||||+.+.|..
T Consensus       290 ~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          290 FRPRTPPDAIDLISRLLEYTPSARLTA-----IEALCHPFFDELRTGE  332 (394)
T ss_dssp             SCTTCCHHHHHHHHHHCCSSGGGSCCH-----HHHHTSGGGSTTTSSC
T ss_pred             ccccCCHHHHHHHHHHhCCChhhCCCH-----HHHhcChhhhhhcccc
Confidence            344689999999999999999999998     9999999999988754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.13  E-value=1.5e-06  Score=63.83  Aligned_cols=45  Identities=20%  Similarity=0.347  Sum_probs=40.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ   68 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~   68 (126)
                      ..++..+++||.+||..||.+|+++     .+++.||||.+++|.....+
T Consensus       243 ~~~~~~~~~li~~~l~~dp~~Rps~-----~e~l~hp~~~~~~~~~~~~~  287 (321)
T 2a2a_A          243 SHTSELAKDFIRKLLVKETRKRLTI-----QEALRHPWITPVDNQQAMVR  287 (321)
T ss_dssp             TTCCHHHHHHHHTTSCSSTTTSCCH-----HHHHHSTTTSCSSHHHHHHH
T ss_pred             cccCHHHHHHHHHHcCCChhhCcCH-----HHHhcCccccCCCccccccc
Confidence            5789999999999999999999998     99999999999999875544

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.13  E-value=1.3e-07  Score=73.18  Aligned_cols=55  Identities=22%  Similarity=0.390  Sum_probs=44.9

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh---------hHHhcCCCCCCcccCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW---------DGLRNQTLTPPIIPVIKG   80 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w---------~~l~~~~~~ppf~P~~~~   80 (126)
                      .+..+++||.+||..||.+|+++     .+|+.||||.++.|         +.+......+|+++.+..
T Consensus       256 ~~~~~~~li~~~L~~dP~~Rps~-----~evl~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  319 (432)
T 3p23_A          256 EDVIARELIEKMIAMDPQKRPSA-----KHVLKHPFFWSLEKQLQFFQDVSDRIEKESLDGPIVKQLER  319 (432)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCH-----HHHHTSTTTCCHHHHHHHHHHHHHHCSCSCSSCHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCCHhhCCCH-----HHHHhCccccChHHHHHHHHHHHHHhhcccccchHHHHHHH
Confidence            45678999999999999999988     99999999999988         344555666777776543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.11  E-value=7.8e-07  Score=65.54  Aligned_cols=47  Identities=19%  Similarity=0.299  Sum_probs=37.1

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPP   73 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~pp   73 (126)
                      +.++++||.+||..||.+|+++     .++++||||.+++|.....+....|
T Consensus       307 ~~~l~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~~~~~~~~~~~~~p  353 (355)
T 2eu9_A          307 HVQLFDLMRRMLEFDPAQRITL-----AEALLHPFFAGLTPEERSFHTSRNP  353 (355)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCCH-----HHHTTSGGGGGCCHHHHC-------
T ss_pred             HHHHHHHHHHHhcCChhhCcCH-----HHHhcChhhcCCChhhccccccCCC
Confidence            4688999999999999999998     9999999999999987665554433

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.11  E-value=1.9e-06  Score=63.74  Aligned_cols=46  Identities=20%  Similarity=0.351  Sum_probs=41.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQT   69 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~   69 (126)
                      ..++..+++||.+||..||.+|+++     .+++.||||+..+|.....+.
T Consensus       242 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~~~~~~~~~~~~~~  287 (326)
T 2y0a_A          242 SNTSALAKDFIRRLLVKDPKKRMTI-----QDSLQHPWIKPKDTQQALSRK  287 (326)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHHSTTTSCCSHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCH-----HHHhcCCCccCCcchhhhhhh
Confidence            5689999999999999999999998     999999999999997655443

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.10  E-value=1.4e-06  Score=63.05  Aligned_cols=37  Identities=24%  Similarity=0.511  Sum_probs=34.0

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +.++.++++||.+||+.||.+|+++     .++++||||+++
T Consensus       253 ~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~  289 (292)
T 3o0g_A          253 PKLNATGRDLLQNLLKCNPVQRISA-----EEALQHPYFSDF  289 (292)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTC
T ss_pred             cccChHHHHHHHHHhccChhhCCCH-----HHHhcCcccccC
Confidence            4588999999999999999999998     999999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.07  E-value=2.5e-06  Score=61.64  Aligned_cols=42  Identities=19%  Similarity=0.335  Sum_probs=35.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR   66 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~   66 (126)
                      .++..+++||.+||..||.+|+++     .+++.||||+...++.+.
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~h~~~~~~~~~~~~  296 (298)
T 1phk_A          255 DYSDTVKDLVSRFLVVQPQKRYTA-----EEALAHPFFQQYVVEEVR  296 (298)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCH-----HHHTTSGGGCTTC-----
T ss_pred             ccCHHHHHHHHHHccCCcccCCCH-----HHHHhChHhhhccchhhc
Confidence            588999999999999999999988     999999999998887653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.05  E-value=1.9e-06  Score=62.26  Aligned_cols=38  Identities=18%  Similarity=0.357  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||++.+
T Consensus       251 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~n  288 (288)
T 1ob3_A          251 KGLDESGIDLLSKMLKLDPNQRITA-----KQALEHAYFKENN  288 (288)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGGC--
T ss_pred             hhcCHHHHHHHHHHcCCCcccCCCH-----HHHhcCcchhhcC
Confidence            4589999999999999999999998     9999999998653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.03  E-value=1.9e-06  Score=62.47  Aligned_cols=53  Identities=23%  Similarity=0.419  Sum_probs=44.5

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      +++.|. ++  .+.+|..++..+.+||.+||..||.+|+++     .+++.||||+.....
T Consensus       221 ~~~~i~-~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          221 LFENIG-KG--SYAIPGDCGPPLSDLLKGMLEYEPAKRFSI-----RQIRQHSWFRKKHPP  273 (305)
T ss_dssp             HHHHHH-HC--CCCCCSSSCHHHHHHHHHHTCSSTTTSCCH-----HHHHHSHHHHSCCCC
T ss_pred             HHHHHh-cC--CCCCCCccCHHHHHHHHHHccCChhhCCCH-----HHHhcCcccccCCCC
Confidence            455566 44  667888899999999999999999999988     999999999865543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.03  E-value=2.9e-06  Score=63.51  Aligned_cols=37  Identities=14%  Similarity=0.306  Sum_probs=34.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||+..
T Consensus       284 ~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~  320 (364)
T 3qyz_A          284 PNADSKALDLLDKMLTFNPHKRIEV-----EQALAHPYLEQY  320 (364)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGTTT
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCcchhhc
Confidence            4678999999999999999999998     999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.02  E-value=1.7e-06  Score=63.22  Aligned_cols=42  Identities=17%  Similarity=0.267  Sum_probs=38.0

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      +..++..+++||.+||..||.+|+++     .+++.||||+++.+..
T Consensus       266 ~~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~~~~~~~~~  307 (326)
T 1blx_A          266 VTDIDELGKDLLLKCLTFNPAKRISA-----YSALSHPYFQDLERCK  307 (326)
T ss_dssp             CCSCCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGTTCCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCcccCCCH-----HHHhcCccccccchhh
Confidence            45689999999999999999999998     9999999999887753

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.02  E-value=1.9e-06  Score=65.05  Aligned_cols=42  Identities=10%  Similarity=0.292  Sum_probs=34.0

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      ++..+++++++||.+||+.||.+|+++     .+++.||||+.+.|.
T Consensus       302 ~~~~~s~~~~~li~~~L~~dP~~Rpta-----~ell~hp~f~~~~~~  343 (389)
T 3gni_B          302 YHRTFSPHFHHFVEQCLQRNPDARPSA-----STLLNHSFFKQIKRR  343 (389)
T ss_dssp             ----CCHHHHHHHHHHTCSCTTTSCCH-----HHHTTSGGGGGC---
T ss_pred             cccccCHHHHHHHHHHhhcCcccCCCH-----HHHhcCHHHHHHhhc
Confidence            456789999999999999999999998     999999999988764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.00  E-value=3.2e-06  Score=63.57  Aligned_cols=47  Identities=28%  Similarity=0.527  Sum_probs=38.7

Q ss_pred             HHHHHhcCCCcccCCC--CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           4 YNMIINVGIDKIPFPK--HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~--~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+.|+ ..  .+.+|.  .+++++++||.+||..||.+|+++     .+|+.||||.
T Consensus       231 ~~~~~-~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~-----~ell~hp~f~  279 (361)
T 3uc3_A          231 IQRIL-SV--KYSIPDDIRISPECCHLISRIFVADPATRISI-----PEIKTHSWFL  279 (361)
T ss_dssp             HHHHH-TT--CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCH-----HHHHTSHHHH
T ss_pred             HHHHh-cC--CCCCCCcCCCCHHHHHHHHHHccCChhHCcCH-----HHHHhCcchh
Confidence            44555 33  455654  589999999999999999999998     9999999994

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=97.99  E-value=2.8e-06  Score=66.65  Aligned_cols=50  Identities=26%  Similarity=0.493  Sum_probs=44.1

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++++|. .+  .+..|..+++++++||.+||..||.+|+++     .+|+.||||+.
T Consensus       223 ~~~~~i~-~~--~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~-----~eil~hp~~~~  272 (476)
T 2y94_A          223 TLFKKIC-DG--IFYTPQYLNPSVISLLKHMLQVDPMKRATI-----KDIREHEWFKQ  272 (476)
T ss_dssp             HHHHHHH-TT--CCCCCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTCHHHHT
T ss_pred             HHHHHHh-cC--CcCCCccCCHHHHHHHHHHcCCCchhCcCH-----HHHHhCHHhhh
Confidence            3567777 55  677888999999999999999999999998     99999999974

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=97.98  E-value=5.3e-06  Score=61.35  Aligned_cols=49  Identities=29%  Similarity=0.544  Sum_probs=39.9

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++++|. .+  .+.++    ..++.++++||.+||..||.+|+++     .+++.||||++
T Consensus       224 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~-----~ell~h~w~~~  276 (325)
T 3kn6_A          224 IMKKIK-KG--DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKM-----SGLRYNEWLQD  276 (325)
T ss_dssp             HHHHHT-TT--CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCT-----TTSTTCGGGCT
T ss_pred             HHHHHH-cC--CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCH-----HHHhcChhhcc
Confidence            445555 33  44444    3589999999999999999999998     99999999985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=97.96  E-value=2.7e-06  Score=62.55  Aligned_cols=41  Identities=17%  Similarity=0.366  Sum_probs=36.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..++.++++||.+||+.||.+|+++     .+++.||||+.+.|.+
T Consensus       264 ~~~~~~l~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~~~~~  304 (317)
T 2pmi_A          264 EPLDGNLMDFLHGLLQLNPDMRLSA-----KQALHHPWFAEYYHHA  304 (317)
T ss_dssp             SCCCHHHHHHHHHHSCSSGGGSCCH-----HHHTTSGGGGGGCC--
T ss_pred             ccCCHHHHHHHHHHCCCCcccCCCH-----HHHhCChhhhcccchh
Confidence            3578999999999999999999998     9999999999877754

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=97.95  E-value=2.7e-06  Score=62.70  Aligned_cols=39  Identities=18%  Similarity=0.258  Sum_probs=35.3

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||.++..
T Consensus       252 ~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          252 PRLDSDGADLLTKLLQFEGRNRISA-----EDAMKHPFFLSLGE  290 (324)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCH-----HHHTTSGGGGGGCS
T ss_pred             CCCCHHHHHHHHHHcCcCcccCCCH-----HHHhcChhhhhccc
Confidence            3578999999999999999999998     99999999987654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=97.94  E-value=4.4e-06  Score=61.79  Aligned_cols=41  Identities=17%  Similarity=0.277  Sum_probs=37.4

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..++.++++||.+||..||.+|+++     .++++||||+.+.+..
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~~~~~  316 (353)
T 2b9h_A          276 PRVNPKGIDLLQRMLVFDPAKRITA-----KEALEHPYLQTYHDPN  316 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTTCCTT
T ss_pred             ccCCHHHHHHHHHhcCcCcccCCCH-----HHHhcCccccccCCcc
Confidence            4689999999999999999999998     9999999999887754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=97.94  E-value=9.4e-06  Score=57.84  Aligned_cols=42  Identities=17%  Similarity=0.269  Sum_probs=35.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ...+|..++.++++||.+||..||.+|+++     .+++.||||.+.
T Consensus       245 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~h~~~~~~  286 (289)
T 1x8b_A          245 LPRIPQVLSQEFTELLKVMIHPDPERRPSA-----MALVKHSVLLSA  286 (289)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCH-----HHHHTCTTC---
T ss_pred             CCCCCcccCHHHHHHHHHHhCCCcccCCCH-----HHHhhChHhhhh
Confidence            345678899999999999999999999998     999999999853

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=97.93  E-value=2.2e-06  Score=63.77  Aligned_cols=41  Identities=15%  Similarity=0.374  Sum_probs=35.9

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +.+|..++.++++||.+||..||.+|+++     .+|+.||||++.
T Consensus       300 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~  340 (373)
T 1q8y_A          300 YKFSKDEAKEISDFLSPMLQLDPRKRADA-----GGLVNHPWLKDT  340 (373)
T ss_dssp             TCCCHHHHHHHHHHHGGGGCSSTTTCBCH-----HHHHTCGGGTTC
T ss_pred             ccCCcchHHHHHHHHHHHhccCccccCCH-----HHHhhChhhhcc
Confidence            34556677899999999999999999998     999999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=97.92  E-value=6.2e-06  Score=61.97  Aligned_cols=41  Identities=17%  Similarity=0.246  Sum_probs=36.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..+++++++||.+||+.||.+|+++     .+++.||||..+....
T Consensus       294 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~~  334 (371)
T 4exu_A          294 PRASPQAADLLEKMLELDVDKRLTA-----AQALTHPFFEPFRDPE  334 (371)
T ss_dssp             TTSCHHHHHHHHHHSCSCTTTSCCH-----HHHHTSGGGTTTCCGG
T ss_pred             cccChHHHHHHHHHCCCChhhcCCH-----HHHhcCcccccCCCcc
Confidence            4679999999999999999999998     9999999999776544

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=97.92  E-value=5e-06  Score=60.02  Aligned_cols=38  Identities=18%  Similarity=0.317  Sum_probs=34.8

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .++.++++||.+||..||.+|+++     .+++.||||+++.+
T Consensus       255 ~~~~~~~~li~~~L~~dP~~Rpt~-----~~~l~hp~~~~~~~  292 (299)
T 2r3i_A          255 PLDEDGRSLLSQMLHYDPNKRISA-----KAALAHPFFQDVTK  292 (299)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGTTCCC
T ss_pred             CCCHHHHHHHHHhcCcCcccCCCH-----HHHhcChhhhcCCC
Confidence            478999999999999999999998     99999999997654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=97.91  E-value=4.7e-06  Score=59.68  Aligned_cols=42  Identities=24%  Similarity=0.462  Sum_probs=36.6

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .+.+|..++.++++||.+||..||.+|+++     .+++.||||...
T Consensus       228 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~~l~h~~~~~~  269 (278)
T 3cok_A          228 DYEMPSFLSIEAKDLIHQLLRRNPADRLSL-----SSVLDHPFMSRN  269 (278)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSGGGSCCH-----HHHTTSTTTC--
T ss_pred             ccCCccccCHHHHHHHHHHcccCHhhCCCH-----HHHhcCccccCC
Confidence            455677899999999999999999999998     999999999853

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=97.90  E-value=6.5e-06  Score=59.35  Aligned_cols=40  Identities=23%  Similarity=0.404  Sum_probs=35.2

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..++...++++++||.+||..||.+|+++     .+|+.||||++
T Consensus       249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~h~~f~~  288 (290)
T 1t4h_A          249 ASFDKVAIPEVKEIIEGCIRQNKDERYSI-----KDLLNHAFFQE  288 (290)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGC-
T ss_pred             cccCCCCCHHHHHHHHHHccCChhhCCCH-----HHHhhCccccc
Confidence            34556788999999999999999999998     99999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=97.90  E-value=1.3e-06  Score=65.65  Aligned_cols=51  Identities=18%  Similarity=0.355  Sum_probs=39.6

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK   79 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~   79 (126)
                      +.++++||.+||..||.+|+++     .+++.||||..  |.........||.+|...
T Consensus       292 ~~~~~~li~~mL~~dP~~R~t~-----~e~l~hp~~~~--~~~~~~~~~~~~~~~~~~  342 (371)
T 2xrw_A          292 ASQARDLLSKMLVIDASKRISV-----DEALQHPYINV--WYDPSEAEAPPPKIPDKQ  342 (371)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCH-----HHHHHSHHHHT--TCCHHHHTCCCCCCCTTT
T ss_pred             cHHHHHHHHHHCcCChhhCCCH-----HHHhCCcchhh--hcCccccCCCCCCCCChh
Confidence            6789999999999999999998     99999999984  333333344566666543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=97.90  E-value=4.9e-06  Score=61.20  Aligned_cols=47  Identities=23%  Similarity=0.406  Sum_probs=41.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHH
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGL   65 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l   65 (126)
                      ...++..++.++++||.+||..||.+|+++     .+|+.||||+++.+..-
T Consensus       259 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~hp~~~~~~~~~~  305 (320)
T 3a99_A          259 QVFFRQRVSSECQHLIRWCLALRPSDRPTF-----EEIQNHPWMQDVLLPQE  305 (320)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGSSCCCHHH
T ss_pred             cccccccCCHHHHHHHHHHccCChhhCcCH-----HHHhcCHhhcCccCccc
Confidence            455677899999999999999999999998     99999999998876543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=97.89  E-value=3.9e-06  Score=59.93  Aligned_cols=49  Identities=24%  Similarity=0.524  Sum_probs=41.3

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++.|. .+  ...+|..++..+++||.+||..||.+|+++     .+|+.||||+.
T Consensus       219 ~~~~~~-~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~~l~h~~~~~  267 (276)
T 2h6d_A          219 LFKKIR-GG--VFYIPEYLNRSVATLLMHMLQVDPLKRATI-----KDIREHEWFKQ  267 (276)
T ss_dssp             HHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHSHHHHT
T ss_pred             HHHHhh-cC--cccCchhcCHHHHHHHHHHccCChhhCCCH-----HHHHhChhhcc
Confidence            345555 33  566788899999999999999999999998     99999999963

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=97.88  E-value=4.6e-06  Score=59.80  Aligned_cols=49  Identities=33%  Similarity=0.552  Sum_probs=41.7

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++.|. ..  ...+|..++.++++||.+||..||.+|+++     .+|+.||||..
T Consensus       215 ~~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e~l~h~~~~~  263 (279)
T 3fdn_A          215 TYKRIS-RV--EFTFPDFVTEGARDLISRLLKHNPSQRPML-----REVLEHPWITA  263 (279)
T ss_dssp             HHHHHH-HT--CCCCCTTSCHHHHHHHHHHCCSSGGGSCCH-----HHHHHCHHHHH
T ss_pred             HHHHHH-hC--CCCCCCcCCHHHHHHHHHHhccChhhCCCH-----HHHhhCccccC
Confidence            344555 33  567888899999999999999999999998     99999999974

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=97.87  E-value=6.7e-06  Score=59.29  Aligned_cols=44  Identities=18%  Similarity=0.314  Sum_probs=32.0

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRN   67 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~   67 (126)
                      ..++.++++||.+||..||.+|+++     .+|+.||||....+..+.+
T Consensus       258 ~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~h~~~~~~~~~~~~q  301 (303)
T 2vwi_A          258 KKYGKSFRKMISLCLQKDPEKRPTA-----AELLRHKFFQKAKNKEFLQ  301 (303)
T ss_dssp             CCCCHHHHHHHHHHCCSSGGGSCCH-----HHHHTSTTC----------
T ss_pred             hhhhHHHHHHHHHHccCChhhCcCH-----HHHhhChhhhcCCCCcccc
Confidence            4678999999999999999999998     9999999999877765443

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=97.87  E-value=5.6e-06  Score=63.47  Aligned_cols=43  Identities=26%  Similarity=0.357  Sum_probs=38.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR   66 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~   66 (126)
                      ..++..+++||.+||..||.+|+++     .+++.||||++.+|....
T Consensus       370 ~~~~~~~~~li~~~L~~dP~~Rps~-----~e~l~hp~~~~~~~~~~~  412 (419)
T 3i6u_A          370 AEVSEKALDLVKKLLVVDPKARFTT-----EEALRHPWLQDEDMKRKF  412 (419)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGCCHHHHHHH
T ss_pred             cccCHHHHHHHHHHccCChhHCcCH-----HHHhCCcccCChhHHHHH
Confidence            4689999999999999999999998     999999999998886543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=97.87  E-value=1.4e-05  Score=57.33  Aligned_cols=44  Identities=16%  Similarity=0.312  Sum_probs=38.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRN   67 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~   67 (126)
                      ...+..+++||.+||..||.+|+++     .+++.||||....+.....
T Consensus       254 ~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~h~~~~~~~~~~~~~  297 (303)
T 1zy4_A          254 DNKMKVEKKIIRLLIDHDPNKRPGA-----RTLLNSGWLPVKHQDEVIK  297 (303)
T ss_dssp             TTTSHHHHHHHHHHTCSSGGGSCCH-----HHHHHSSCSCCCCHHHHHH
T ss_pred             ccchHHHHHHHHHHHhcCcccCcCH-----HHHhCCCCcCCCChHHHHH
Confidence            4566789999999999999999998     9999999999888876554

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=97.85  E-value=7.3e-07  Score=66.79  Aligned_cols=41  Identities=27%  Similarity=0.553  Sum_probs=37.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+.+|..+|+++++||.+||..||.+|+++     .+|+.||||+.
T Consensus       224 ~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~-----~eil~hp~~~~  264 (336)
T 3h4j_B          224 VYVMPDFLSPGAQSLIRRMIVADPMQRITI-----QEIRRDPWFNV  264 (336)
T ss_dssp             CCCCCTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHTTCHHHHT
T ss_pred             CCCCcccCCHHHHHHHHHHcCCChhHCcCH-----HHHHhChhhcc
Confidence            455677899999999999999999999998     99999999973

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=97.85  E-value=7.3e-06  Score=61.72  Aligned_cols=41  Identities=12%  Similarity=0.195  Sum_probs=35.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..+++++++||.+||..||.+|+++     .+++.||||+.+.+..
T Consensus       278 ~~~~~~~~~ll~~mL~~dP~~R~t~-----~e~l~hp~f~~~~~~~  318 (367)
T 1cm8_A          278 TNASPLAVNLLEKMLVLDAEQRVTA-----GEALAHPYFESLHDTE  318 (367)
T ss_dssp             TTCCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGTTTC---
T ss_pred             CCCCHHHHHHHHHHccCChhHCCCH-----HHHhcChHHHhhcCCc
Confidence            5679999999999999999999998     9999999999876543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=97.85  E-value=4.4e-06  Score=64.08  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=36.3

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      +..++.++++||.+||..||.+|+++     .+++.||||..+.+.
T Consensus       306 ~~~~~~~~~~Li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          306 RPRTPPEAIALCSRLLEYTPTARLTP-----LEACAHSFFDELRDP  346 (420)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGGGGGCT
T ss_pred             CCCCCHHHHHHHHHhccCChhHCCCH-----HHHhCCHhhcccccc
Confidence            34678999999999999999999998     999999999876553

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=97.84  E-value=8.5e-06  Score=58.88  Aligned_cols=44  Identities=11%  Similarity=0.214  Sum_probs=39.5

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHh
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR   66 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~   66 (126)
                      |..++.++++||.+||..||.+|++.     .+|+.||||.++.|....
T Consensus       245 ~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~h~~~~~~~~~~~~  288 (302)
T 2j7t_A          245 PSKWSVEFRDFLKIALDKNPETRPSA-----AQLLEHPFVSSITSNKAL  288 (302)
T ss_dssp             GGGSCHHHHHHHHHHSCSCTTTSCCH-----HHHTTSTTTTTCCCCHHH
T ss_pred             ccccCHHHHHHHHHHcccChhhCCCH-----HHHhcChHHhhhccchhH
Confidence            45689999999999999999999998     999999999999886543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=97.84  E-value=2.3e-06  Score=63.76  Aligned_cols=41  Identities=17%  Similarity=0.218  Sum_probs=36.4

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||++.+|..
T Consensus       295 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~~~~~  335 (360)
T 3eqc_A          295 GVFSLEFQDFVNKCLIKNPAERADL-----KQLMVHAFIKRSDAEE  335 (360)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCCH-----HHHHTSHHHHHHHHSC
T ss_pred             ccccHHHHHHHHHHhhcChhhCCCH-----HHHhhChHhhcchHhh
Confidence            3579999999999999999999998     9999999998766543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=97.84  E-value=4e-06  Score=62.66  Aligned_cols=52  Identities=27%  Similarity=0.521  Sum_probs=42.0

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ++..|+ ++  .+.++    ..++.++++||.+||..||.+|+++     .+++.||||+..++
T Consensus       240 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~-----~e~l~hp~~~~~~~  295 (351)
T 3c0i_A          240 LFEGII-KG--KYKMNPRQWSHISESAKDLVRRMLMLDPAERITV-----YEALNHPWLKERDR  295 (351)
T ss_dssp             HHHHHH-HT--CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSHHHHTHHH
T ss_pred             HHHHHH-cC--CCCCCccccccCCHHHHHHHHHHCCCChhHCcCH-----HHHhcChhhcCCcc
Confidence            455666 43  44443    4689999999999999999999998     99999999987554

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=97.84  E-value=1.2e-05  Score=59.81  Aligned_cols=40  Identities=18%  Similarity=0.258  Sum_probs=36.3

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||..+...
T Consensus       276 ~~~~~~~~~li~~~L~~dp~~Rpt~-----~e~l~hp~f~~~~~~  315 (353)
T 3coi_A          276 PRASPQAADLLEKMLELDVDKRLTA-----AQALTHPFFEPFRDP  315 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSCTTTSCCH-----HHHHTSGGGTTTCCG
T ss_pred             CCcCHHHHHHHHHHcCCCcccCCCH-----HHHhcCcchhhccCc
Confidence            4679999999999999999999998     999999999977654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=97.83  E-value=2.3e-06  Score=62.10  Aligned_cols=41  Identities=17%  Similarity=0.318  Sum_probs=36.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||+.++|..
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~~~p~  316 (320)
T 2i6l_A          276 PGISREAVDFLEQILTFSPMDRLTA-----EEALSHPYMSIYSFPM  316 (320)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSCCH-----HHHHTSHHHHTTCC--
T ss_pred             chhhHHHHHHHHHHcCCCccccCCH-----HHHhCCcccccccCcc
Confidence            5689999999999999999999988     9999999999888754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=97.82  E-value=1.3e-05  Score=62.15  Aligned_cols=50  Identities=30%  Similarity=0.555  Sum_probs=41.2

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++++|. .+  .+.+|    ..+++++++||.+||..||.+|+++     .+++.||||..
T Consensus       220 ~~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta-----~e~L~hp~~~~  273 (444)
T 3soa_A          220 RLYQQIK-AG--AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITA-----AEALKHPWISH  273 (444)
T ss_dssp             HHHHHHH-HT--CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSCTTHH
T ss_pred             HHHHHHH-hC--CCCCCccccccCCHHHHHHHHHHcCCChhHCCCH-----HHHhcCccccC
Confidence            3566676 44  45555    3689999999999999999999998     99999999963

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=97.81  E-value=1.4e-05  Score=59.41  Aligned_cols=38  Identities=18%  Similarity=0.308  Sum_probs=34.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ..+++.+++||.+||..||.+|+++     .+++.||||+.+.
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~  324 (362)
T 3pg1_A          287 PTADPVALDLIAKMLEFNPQRRIST-----EQALRHPYFESLF  324 (362)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGTTTC
T ss_pred             CCCCHHHHHHHHHHhcCChhhCCCH-----HHHHcCchhhhcc
Confidence            4678999999999999999999998     9999999999763

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=97.81  E-value=1.5e-05  Score=59.25  Aligned_cols=50  Identities=20%  Similarity=0.419  Sum_probs=40.7

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC------CChhHHhcCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG------FDWDGLRNQT   69 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~------v~w~~l~~~~   69 (126)
                      ...|..++.++++||.+||..||.+|+++     .+|+.||||+.      ++|+.+....
T Consensus       241 ~~~~~~~~~~l~~li~~~L~~dP~~Rps~-----~ell~hp~~~~~~~~~~~~~~~~~~~~  296 (335)
T 3dls_A          241 IHPPYLVSKELMSLVSGLLQPVPERRTTL-----EKLVTDPWVTQPVNLADYTWEEVFRVN  296 (335)
T ss_dssp             CCCSSCCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHCTTTTCCCCGGGCCHHHHC---
T ss_pred             cCCCcccCHHHHHHHHHHccCChhhCcCH-----HHHhcCccccCCccccccCHHHHhhhc
Confidence            34556789999999999999999999998     99999999964      6787766554

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=97.81  E-value=1.3e-05  Score=59.95  Aligned_cols=52  Identities=23%  Similarity=0.367  Sum_probs=41.7

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      +++.|+ .+  .+.++    ..++.++++||.+||..||.+|+++     .+++.||||.+...
T Consensus       259 ~~~~i~-~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          259 MFRRIL-NC--EYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTT-----FQALQHPWVTGKAA  314 (349)
T ss_dssp             HHHHHH-TT--CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHHSTTTTSTTC
T ss_pred             HHHHHH-hC--CCccCCchhhhCCHHHHHHHHHHccCChhhCcCH-----HHHhcCcccCCCcc
Confidence            456666 43  33332    4689999999999999999999998     99999999987554

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=97.81  E-value=1.2e-05  Score=57.55  Aligned_cols=41  Identities=24%  Similarity=0.312  Sum_probs=36.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..+++++++||.+||..||.+|+++     .+++.||||.+..+..
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~Rps~-----~~~l~h~~~~~~~~~~  272 (284)
T 3kk8_A          232 DTVTPEAKSLIDSMLTVNPKKRITA-----DQALKVPWICNRERVA  272 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCH-----HHHTTSHHHHSCCCGG
T ss_pred             cccCHHHHHHHHHHcccChhhCCCH-----HHHhcCccccCChhHH
Confidence            3689999999999999999999998     9999999998776654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=97.79  E-value=2.8e-06  Score=63.78  Aligned_cols=41  Identities=12%  Similarity=0.051  Sum_probs=37.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..++..+++||.+||..||.+|+++     .+++.||||+++.|..
T Consensus       323 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~~~~~  363 (371)
T 3q60_A          323 TPLPDFVKTLIGRFLNFDRRRRLLP-----LEAMETPEFLQLQNEI  363 (371)
T ss_dssp             SCCCHHHHHHHHHHTCSSTTTCCCH-----HHHTTSHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCHHHHHHHHHH
Confidence            4789999999999999999999998     9999999999888864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=97.79  E-value=1.2e-05  Score=58.59  Aligned_cols=37  Identities=11%  Similarity=0.242  Sum_probs=32.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +.++.++++||.+||..||.+|+++     .+++.||||+..
T Consensus       267 ~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~h~~~~~~  303 (308)
T 3g33_A          267 PEMEESGAQLLLEMLTFNPHKRISA-----FRALQHSYLHKD  303 (308)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSTTC---
T ss_pred             ccccHHHHHHHHHHhcCCCccCCCH-----HHHhcCccccCC
Confidence            3678999999999999999999998     999999999853

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=97.78  E-value=1.4e-05  Score=57.74  Aligned_cols=49  Identities=24%  Similarity=0.409  Sum_probs=41.9

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +..+. ..  .+.+|..++..+++||.+||..||.+|+++     .+++.||||...
T Consensus       224 ~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~ll~~~~~~~~  272 (294)
T 2rku_A          224 YLRIK-KN--EYSIPKHINPVAASLIQKMLQTDPTARPTI-----NELLNDEFFTSG  272 (294)
T ss_dssp             HHHHH-TT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCG-----GGGGGSHHHHTS
T ss_pred             HHHHh-hc--cCCCccccCHHHHHHHHHHcccChhhCcCH-----HHHhhChheecC
Confidence            44555 33  677888999999999999999999999998     999999999743

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=97.77  E-value=4.1e-06  Score=63.36  Aligned_cols=55  Identities=18%  Similarity=0.324  Sum_probs=43.8

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHH
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGL   65 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l   65 (126)
                      ++.+|+ .+  .+.++    ..++.++++||.+||..||.+|+++     .+++.||||.+..+...
T Consensus       296 ~~~~i~-~~--~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~-----~e~l~hp~~~~~~~~~~  354 (373)
T 2x4f_A          296 TLNNIL-AC--RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISA-----SEALKHPWLSDHKLHSR  354 (373)
T ss_dssp             HHHHHH-HT--CCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHHSHHHHCHHHHHH
T ss_pred             HHHHHH-hc--cCCCChhhhccCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCcCcCCCchhhh
Confidence            345566 33  33333    4689999999999999999999998     99999999998877543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=97.77  E-value=7.1e-06  Score=61.83  Aligned_cols=35  Identities=17%  Similarity=0.165  Sum_probs=30.2

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .++++||.+||+.||.+|+++     .++++||||+...+
T Consensus       347 ~~~~dli~~mL~~dP~~Rpta-----~e~L~hp~f~~~~~  381 (382)
T 2vx3_A          347 LKFKDLILRMLDYDPKTRIQP-----YYALQHSFFKKTAD  381 (382)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCH-----HHHTTSGGGCC---
T ss_pred             HHHHHHHHHhcCCChhhCCCH-----HHHhcCcccccCCC
Confidence            478999999999999999998     99999999987544

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=97.77  E-value=2.1e-05  Score=59.35  Aligned_cols=44  Identities=11%  Similarity=0.133  Sum_probs=34.0

Q ss_pred             HHHHHHhcCCCc-ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           3 TYNMIINVGIDK-IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         3 l~~~I~~~~~~~-~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ++.+|. ..... ..+|+.+|+++++||.+||.+||.+|+++     .||+
T Consensus       264 ~~~~i~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa-----~el~  308 (336)
T 4g3f_A          264 LCLKIA-SEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASA-----MELR  308 (336)
T ss_dssp             CHHHHH-HSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             HHHHHH-cCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCH-----HHHH
Confidence            456677 33111 24678999999999999999999999987     7774

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=97.76  E-value=5.8e-06  Score=61.12  Aligned_cols=50  Identities=16%  Similarity=0.309  Sum_probs=40.9

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ++.+|+ .+  .+.++    ..+|.++++||.+||..||.+|+++     .+++.||||+..
T Consensus       211 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~-----~e~l~hp~~~~~  264 (321)
T 1tki_A          211 IIENIM-NA--EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA-----SEALQHPWLKQK  264 (321)
T ss_dssp             HHHHHH-HT--CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHHSHHHHSC
T ss_pred             HHHHHH-cC--CCCCChhhhccCCHHHHHHHHHHcCCChhHCcCH-----HHHhcChhhccC
Confidence            455666 43  45554    4789999999999999999999998     999999999753

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=97.76  E-value=4.4e-06  Score=64.85  Aligned_cols=52  Identities=27%  Similarity=0.479  Sum_probs=41.4

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ++++|. ++  .+.++    ..+|.++++||.+||..+|.+|+++     .+++.||||+...+
T Consensus       235 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~-----~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          235 ILKKVE-KG--KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISA-----RDALDHEWIQTYTK  290 (484)
T ss_dssp             HHHHHH-HC--CCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSHHHHHHTC
T ss_pred             HHHHHH-cC--CCCCCCcccccCCHHHHHHHHHHCCCChhHCcCH-----HHHhhChhhccccc
Confidence            455666 44  33333    4689999999999999999999998     99999999986544

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=97.75  E-value=6.2e-06  Score=61.14  Aligned_cols=37  Identities=24%  Similarity=0.310  Sum_probs=33.9

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .+.++++||.+||+.||.+|+++     .+++.||||+.+..
T Consensus       287 ~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          287 DAKEAYDLLSALLQYLPEERMKP-----YEALCHPYFDELHD  323 (360)
T ss_dssp             THHHHHHHHHHHTCSSGGGSCCH-----HHHTTSGGGGGGGC
T ss_pred             ccHHHHHHHHHHhccCccccCCH-----HHHhcCccccccCC
Confidence            67899999999999999999998     99999999997654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=97.74  E-value=1.5e-05  Score=61.25  Aligned_cols=35  Identities=17%  Similarity=0.224  Sum_probs=32.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..++++++||.+||+.||.+|+++     .+++.||||+.
T Consensus       380 ~~~~~~~dli~~~L~~dP~~Rpta-----~e~L~Hpw~~~  414 (429)
T 3kvw_A          380 CDDPLFLDFLKQCLEWDPAVRMTP-----GQALRHPWLRR  414 (429)
T ss_dssp             CCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSTTTC-
T ss_pred             cchHHHHHHHHHHCCCChhhCCCH-----HHHhCChhhcc
Confidence            458899999999999999999998     99999999984

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=97.74  E-value=2e-05  Score=59.41  Aligned_cols=39  Identities=13%  Similarity=0.187  Sum_probs=35.2

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      .+++++++||.+||+.||.+|+++     .+++.||||..+...
T Consensus       283 ~~~~~~~dLl~~mL~~dP~~R~t~-----~e~L~hp~~~~~~~~  321 (367)
T 2fst_X          283 GANPLAVDLLEKMLVLDSDKRITA-----AQALAHAYFAQYHDP  321 (367)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTTCCG
T ss_pred             CCCHHHHHHHHHhCCCCcccCcCH-----HHHhcChhhhhccCC
Confidence            578999999999999999999998     999999999976543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=97.74  E-value=1.5e-05  Score=58.97  Aligned_cols=49  Identities=24%  Similarity=0.409  Sum_probs=41.7

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +..+. ..  .+.+|..++..+++||.+||..||.+|+++     .+|+.|+||...
T Consensus       250 ~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~~~~~~~~  298 (335)
T 2owb_A          250 YLRIK-KN--EYSIPKHINPVAASLIQKMLQTDPTARPTI-----NELLNDEFFTSG  298 (335)
T ss_dssp             HHHHH-HT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCG-----GGGGGSHHHHTS
T ss_pred             HHHHh-cC--CCCCCccCCHHHHHHHHHHccCChhHCcCH-----HHHhcCccccCC
Confidence            44455 33  567888999999999999999999999998     999999999753

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=97.74  E-value=9.7e-06  Score=61.54  Aligned_cols=37  Identities=16%  Similarity=0.193  Sum_probs=34.0

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      +..+.+||.+||+.||.+|+++     .+++.||||.+..+.
T Consensus       307 ~~~~~~Ll~~~L~~dP~~R~ta-----~e~L~hp~f~~~~~~  343 (405)
T 3rgf_A          307 DSKAFHLLQKLLTMDPIKRITS-----EQAMQDPYFLEDPLP  343 (405)
T ss_dssp             TSHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTSSSCC
T ss_pred             CHHHHHHHHHHccCCcccCCCH-----HHHhcChhhccCCCC
Confidence            7899999999999999999998     999999999976654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=97.73  E-value=2.2e-05  Score=59.79  Aligned_cols=39  Identities=31%  Similarity=0.518  Sum_probs=35.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||++..+
T Consensus       275 ~~~s~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~~~  313 (387)
T 1kob_A          275 SSVSPEAKDFIKNLLQKEPRKRLTV-----HDALEHPWLKGDHS  313 (387)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHTSTTTSSCCT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCH-----HHHhhCccccCCcc
Confidence            4689999999999999999999998     99999999997654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.73  E-value=1.4e-05  Score=58.52  Aligned_cols=39  Identities=10%  Similarity=0.131  Sum_probs=35.2

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .++..++.++++||.+||..||.+|+++     .+++.||||+.
T Consensus       272 ~~~~~~~~~l~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~  310 (311)
T 3p1a_A          272 EFTAGLSSELRSVLVMMLEPDPKLRATA-----EALLALPVLRQ  310 (311)
T ss_dssp             HHHTTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGSC
T ss_pred             ccccCCCHHHHHHHHHHcCCChhhCcCH-----HHHHhCccccC
Confidence            3456789999999999999999999998     99999999973

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=97.72  E-value=1.2e-05  Score=59.71  Aligned_cols=41  Identities=20%  Similarity=0.174  Sum_probs=36.4

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||.+..+..
T Consensus       262 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~h~~f~~~~~~~  302 (346)
T 1ua2_A          262 SAAGDDLLDLIQGLFLFNPCARITA-----TQALKMKYFSNRPGPT  302 (346)
T ss_dssp             TTCCHHHHHHHHHHHCSSTTTSCCH-----HHHHTSGGGTSSSCCC
T ss_pred             ccCCHHHHHHHHHHhccChhhCCCH-----HHHhcChhhhcCCCCC
Confidence            4567999999999999999999998     9999999999776543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=97.72  E-value=1.1e-05  Score=63.00  Aligned_cols=49  Identities=20%  Similarity=0.311  Sum_probs=40.7

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++..|. ++  .+.++    ..+|.++++||++||..||.+|+++     .+++.||||+.
T Consensus       255 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~e~l~h~~~~~  307 (504)
T 3q5i_A          255 IIKKVE-KG--KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTA-----EEALNSRWIKK  307 (504)
T ss_dssp             HHHHHH-HC--CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSHHHHH
T ss_pred             HHHHHH-cC--CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCH-----HHHhcCHhhhh
Confidence            456666 44  44444    5789999999999999999999998     99999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=97.71  E-value=1.1e-05  Score=60.63  Aligned_cols=49  Identities=29%  Similarity=0.459  Sum_probs=40.6

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++.+|. .+  .+.+|    ..++.++++||.+||..||.+|+++     .+++.||||.+
T Consensus       238 ~~~~i~-~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~  290 (362)
T 2bdw_A          238 LYAQIK-AG--AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA-----DQALKVPWICN  290 (362)
T ss_dssp             HHHHHH-HT--CCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCH-----HHHTTSHHHHT
T ss_pred             HHHHHH-hC--CCCCCcccccCCCHHHHHHHHHHcCCChhhCcCH-----HHHhcCcccCC
Confidence            456666 44  55555    3579999999999999999999998     99999999974

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=97.71  E-value=1.9e-05  Score=57.11  Aligned_cols=40  Identities=25%  Similarity=0.577  Sum_probs=35.0

Q ss_pred             cccCC--CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          14 KIPFP--KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        14 ~~~~p--~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+.+|  ..++.++++||.+||..||.+|+++     .+|+.||||.
T Consensus       256 ~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~-----~e~l~hp~~~  297 (298)
T 2zv2_A          256 ALEFPDQPDIAEDLKDLITRMLDKNPESRIVV-----PEIKLHPWVT  297 (298)
T ss_dssp             CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCH-----HHHTTCHHHH
T ss_pred             cCCCCCccccCHHHHHHHHHHhhcChhhCCCH-----HHHhcCcccc
Confidence            34444  4689999999999999999999998     9999999985

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=97.71  E-value=1.4e-05  Score=60.25  Aligned_cols=40  Identities=18%  Similarity=0.366  Sum_probs=35.9

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      +|..++.++++||.+||..||.+|+++     .+++.||||+.+.
T Consensus       290 ~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~  329 (383)
T 3eb0_A          290 LPEGTPSLAIDLLEQILRYEPDLRINP-----YEAMAHPFFDHLR  329 (383)
T ss_dssp             SCTTCCHHHHHHHHHHCCSSGGGSCCH-----HHHHTSGGGHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCH-----HHHhcCHHHHHHH
Confidence            456789999999999999999999998     9999999998553

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=97.69  E-value=1.1e-05  Score=59.43  Aligned_cols=38  Identities=21%  Similarity=0.377  Sum_probs=35.2

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .+++++++||.+||..||.+|+++     .+++.||||+++.+
T Consensus       302 ~~~~~~~~li~~~l~~~p~~Rps~-----~~~l~hp~~~~~~~  339 (345)
T 3hko_A          302 VLSPLARDLLSNLLNRNVDERFDA-----MRALQHPWISQFSD  339 (345)
T ss_dssp             GSCHHHHHHHHHHSCSCTTTSCCH-----HHHHHSHHHHTTSS
T ss_pred             cCCHHHHHHHHHHcCCChhHCCCH-----HHHhcChhhccChH
Confidence            479999999999999999999998     99999999997765

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=97.69  E-value=7.6e-06  Score=60.30  Aligned_cols=43  Identities=16%  Similarity=0.185  Sum_probs=38.4

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhc
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRN   67 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~   67 (126)
                      .++..+++||.+||..||.+|+++     .+++.||||+..++.....
T Consensus       278 ~~~~~l~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~~~~~  320 (331)
T 4aaa_A          278 KLSEVVIDLAKKCLHIDPDKRPFC-----AELLHHDFFQMDGFAERFS  320 (331)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCG-----GGGGGSHHHHGGGHHHHHH
T ss_pred             chhHHHHHHHHHHhccCcccCCCH-----HHHhcCchhccCChhhhhh
Confidence            578999999999999999999998     9999999999887765443

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=97.68  E-value=4.5e-05  Score=54.22  Aligned_cols=37  Identities=27%  Similarity=0.578  Sum_probs=33.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++..+++||.+||..||.+|++.     .+|+.||||+..
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~~~~~  268 (276)
T 2yex_A          232 KKIDSAPLALLHKILVENPSARITI-----PDIKKDRWYNKP  268 (276)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCH-----HHHTTCTTTTCC
T ss_pred             hhcCHHHHHHHHHHCCCCchhCCCH-----HHHhcCccccCh
Confidence            4689999999999999999999998     999999999853

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=97.67  E-value=7.6e-06  Score=58.98  Aligned_cols=39  Identities=21%  Similarity=0.447  Sum_probs=35.3

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||+...+
T Consensus       247 ~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~hp~~~~~~~  285 (287)
T 2wei_A          247 RTISDDAKDLIRKMLTFHPSLRITA-----TQCLEHPWIQKYSS  285 (287)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHSHHHHHHCC
T ss_pred             hhcCHHHHHHHHHHcccChhhCcCH-----HHHhcCHHHhcccc
Confidence            4689999999999999999999998     99999999986554

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=97.66  E-value=1.3e-05  Score=57.30  Aligned_cols=47  Identities=34%  Similarity=0.644  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCcccCCC----CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           4 YNMIINVGIDKIPFPK----HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~----~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ...|. .+  ...+|.    .+++++++||.+||..||.+|++.     .+++.||||+
T Consensus       216 ~~~~~-~~--~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~-----~~~l~h~~~~  266 (277)
T 3f3z_A          216 MLKIR-EG--TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITS-----LQALEHEWFE  266 (277)
T ss_dssp             HHHHH-HC--CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH-----HHHTTSHHHH
T ss_pred             HHHHH-hC--CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCH-----HHHhcCHHHh
Confidence            34455 33  445553    689999999999999999999998     9999999996

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=97.65  E-value=5e-06  Score=62.15  Aligned_cols=38  Identities=11%  Similarity=0.317  Sum_probs=32.9

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++...+..+++||.+||..||.+|+++     .+|++||||++
T Consensus       360 ~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~~~~  397 (397)
T 1wak_A          360 WSQEEAAGFTDFLLPMLELIPEKRATA-----AECLRHPWLNS  397 (397)
T ss_dssp             CCHHHHHHHHHHHGGGGCSSGGGSCCH-----HHHHTSGGGGC
T ss_pred             cchhhHHHHHHHHHHHhccChhhcCCH-----HHHhhCccccC
Confidence            344456789999999999999999998     99999999963

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=97.65  E-value=3.6e-05  Score=55.95  Aligned_cols=43  Identities=26%  Similarity=0.451  Sum_probs=37.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ...+|..++.++++||.+||..||.+|+++     .+++.||||+...
T Consensus       249 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e~l~~~~~~~~~  291 (312)
T 2iwi_A          249 ELHFPAHVSPDCCALIRRCLAPKPSSRPSL-----EEILLDPWMQTPA  291 (312)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSTTTSCCH-----HHHHHSTTTCC--
T ss_pred             ccCCcccCCHHHHHHHHHHccCChhhCcCH-----HHHhcChhhcCch
Confidence            456778899999999999999999999998     9999999998653

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=97.65  E-value=1.7e-05  Score=61.79  Aligned_cols=52  Identities=23%  Similarity=0.362  Sum_probs=41.5

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ++++|. .+  .+.++    ..+|.++++||.+||..||.+|+++     .+++.||||+....
T Consensus       245 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~-----~e~l~hp~~~~~~~  300 (494)
T 3lij_A          245 ILRKVE-KG--KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISA-----QQALEHPWIKEMCS  300 (494)
T ss_dssp             HHHHHH-HT--CCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTCHHHHHHHH
T ss_pred             HHHHHH-hC--CCCCCchhcccCCHHHHHHHHHHCCCChhhCccH-----HHHhcCcccccCcc
Confidence            455666 44  44443    4689999999999999999999998     99999999986433

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.65  E-value=2e-05  Score=57.41  Aligned_cols=36  Identities=19%  Similarity=0.333  Sum_probs=33.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++++++||.+||..||.+|+++     .+++.||||+++
T Consensus       297 ~~~~~~~~li~~~l~~~p~~Rps~-----~~~l~~~~f~~~  332 (332)
T 3qd2_B          297 QKYPQEHMMVQDMLSPSPTERPEA-----TDIIENAIFENL  332 (332)
T ss_dssp             HHCHHHHHHHHHHHCSSGGGSCCH-----HHHHHSTTCCCC
T ss_pred             cCChhHHHHHHHHccCCCCcCCCH-----HHHhhchhhhcC
Confidence            467889999999999999999998     999999999875

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=97.64  E-value=2.5e-05  Score=57.18  Aligned_cols=41  Identities=27%  Similarity=0.417  Sum_probs=37.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||.+.+|..
T Consensus       245 ~~~~~~~~~li~~~l~~dP~~Rps~-----~~~l~h~~~~~~~~~~  285 (322)
T 2ycf_A          245 AEVSEKALDLVKKLLVVDPKARFTT-----EEALRHPWLQDEDMKR  285 (322)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGCCHHHHH
T ss_pred             hhcCHHHHHHHHHHcccCHhhCCCH-----HHHhhCcCcCCHHHHH
Confidence            4689999999999999999999998     9999999999888753

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=97.63  E-value=1.2e-05  Score=62.45  Aligned_cols=50  Identities=22%  Similarity=0.465  Sum_probs=39.9

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ++.+|. .+  .+.++    ..+|.++++||.+||..||.+|+++     .+++.||||+..
T Consensus       230 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~~~l~hp~~~~~  283 (486)
T 3mwu_A          230 ILKRVE-TG--KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA-----TQCLEHPWIQKY  283 (486)
T ss_dssp             HHHHHH-HT--CCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCH-----HHHHHCHHHHHT
T ss_pred             HHHHHH-hC--CCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCH-----HHHhcCHhhccC
Confidence            455566 44  33332    4689999999999999999999998     999999999754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=97.63  E-value=1.8e-05  Score=58.67  Aligned_cols=36  Identities=28%  Similarity=0.287  Sum_probs=32.9

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ++++++||.+||..||.+|+++     .+++.||||.+..+
T Consensus       285 ~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          285 DPYALDLIDKLLVLDPAQRIDS-----DDALNHDFFWSDPM  320 (351)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGGSSSC
T ss_pred             ChHHHHHHHHHhcCChhhCCCH-----HHHhCCCCcCCCCC
Confidence            7889999999999999999998     99999999986544

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=97.61  E-value=2.3e-05  Score=56.90  Aligned_cols=37  Identities=24%  Similarity=0.491  Sum_probs=34.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||.+.
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~Rps~-----~~~l~h~~~~~~  268 (304)
T 2jam_A          232 DDISESAKDFICHLLEKDPNERYTC-----EKALSHPWIDGN  268 (304)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCCH-----HHHHTSHHHHSS
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCH-----HHHhcCccccCC
Confidence            5689999999999999999999998     999999999753

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=97.61  E-value=3.8e-05  Score=57.64  Aligned_cols=35  Identities=26%  Similarity=0.413  Sum_probs=32.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..++..+++||.+||..||.+|+++     .+++.||||+
T Consensus       330 ~~~~~~~~~li~~~L~~dP~~Rps~-----~ell~hp~f~  364 (365)
T 2y7j_A          330 DDRSSTVKDLISRLLQVDPEARLTA-----EQALQHPFFE  364 (365)
T ss_dssp             SSSCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGC
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCH-----HHHhcCcccC
Confidence            4688999999999999999999998     9999999996

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.60  E-value=2.1e-05  Score=57.29  Aligned_cols=40  Identities=8%  Similarity=0.199  Sum_probs=36.0

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +..|..++..+++||.+||..||.+|+++     .+++.||||+.
T Consensus       236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~h~~~~~  275 (297)
T 3fxz_A          236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSA-----KELLQHQFLKI  275 (297)
T ss_dssp             CSCGGGSCHHHHHHHHHHSCSSTTTSCCH-----HHHTTCGGGGG
T ss_pred             CCCccccCHHHHHHHHHHccCChhHCcCH-----HHHhhChhhcc
Confidence            34566789999999999999999999998     99999999984

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.59  E-value=3.7e-05  Score=58.34  Aligned_cols=42  Identities=24%  Similarity=0.416  Sum_probs=37.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .+.+|...+.++++||.+||..||.+|+++     .+|+.||||+..
T Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~ell~hp~~~~~  327 (390)
T 2zmd_A          286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISI-----PELLAHPYVQIQ  327 (390)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSHHHHSC
T ss_pred             cCCCCccchHHHHHHHHHHcccChhhCCCH-----HHHhhCcCcccc
Confidence            456777889999999999999999999998     999999999743

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=97.59  E-value=1.7e-05  Score=60.50  Aligned_cols=48  Identities=27%  Similarity=0.562  Sum_probs=39.2

Q ss_pred             HHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           4 YNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ...|. .+  .+.+|    ..++.++++||.+||..||.+|+++     .+|+.||||..
T Consensus       276 ~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~-----~eil~hp~~~~  327 (400)
T 1nxk_A          276 KTRIR-MG--QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI-----TEFMNHPWIMQ  327 (400)
T ss_dssp             HHHHH-HT--CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHHSHHHHT
T ss_pred             HHHHH-cC--cccCCCcccccCCHHHHHHHHHHCCCChhHCcCH-----HHHhcCccccC
Confidence            44555 33  45555    4689999999999999999999988     99999999964

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=97.56  E-value=7.3e-05  Score=55.13  Aligned_cols=37  Identities=27%  Similarity=0.578  Sum_probs=34.0

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++.++++||.+||..||.+|+++     .+|+.||||+..
T Consensus       232 ~~~~~~~~~li~~~L~~dP~~R~t~-----~eil~h~~~~~~  268 (323)
T 3tki_A          232 KKIDSAPLALLHKILVENPSARITI-----PDIKKDRWYNKP  268 (323)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCH-----HHHTTCTTTTCC
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCH-----HHHhhChhhccc
Confidence            4689999999999999999999998     999999999854

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=97.56  E-value=2.1e-05  Score=61.19  Aligned_cols=33  Identities=21%  Similarity=0.355  Sum_probs=30.9

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++++++||.+||+.||.+|+++     .++++||||+.
T Consensus       329 s~~~~dLl~~mL~~dP~~R~ta-----~e~L~Hp~~~~  361 (464)
T 3ttj_A          329 ASQARDLLSKMLVIDPAKRISV-----DDALQHPYINV  361 (464)
T ss_dssp             HHHHHHHHHHHSCSSTTTSCCH-----HHHHTSTTTGG
T ss_pred             CHHHHHHHHHHcCCChhhCCCH-----HHHhcChhhhh
Confidence            6789999999999999999998     99999999983

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=97.56  E-value=3e-05  Score=55.92  Aligned_cols=35  Identities=26%  Similarity=0.541  Sum_probs=32.8

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+++++++||.+||..||.+|+++     .+|+.||||+.
T Consensus       250 ~~~~~~~~li~~~L~~dP~~Rps~-----~e~l~hp~f~~  284 (285)
T 3is5_A          250 PLTPQAVDLLKQMLTKDPERRPSA-----AQVLHHEWFKQ  284 (285)
T ss_dssp             CCCHHHHHHHHHHTCSCTTTSCCH-----HHHHTSGGGGC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCH-----HHHhcCHHhhc
Confidence            478999999999999999999998     99999999974

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.53  E-value=4.3e-05  Score=54.87  Aligned_cols=42  Identities=14%  Similarity=0.230  Sum_probs=37.3

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ...+|..++.++++||.+||..||.+|+++     .+++.|+||+..
T Consensus       244 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~~~~~~~~  285 (295)
T 2clq_A          244 HPEIPESMSAEAKAFILKCFEPDPDKRACA-----NDLLVDEFLKVS  285 (295)
T ss_dssp             CCCCCTTSCHHHHHHHHHTTCSSTTTSCCH-----HHHHTSGGGCC-
T ss_pred             cccccccCCHHHHHHHHHHccCChhhCCCH-----HHHhcChhhhhc
Confidence            446678899999999999999999999998     999999999854

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=97.53  E-value=5.3e-05  Score=56.14  Aligned_cols=41  Identities=24%  Similarity=0.447  Sum_probs=36.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ...+|...+.++++||.+||..||.+|+++     .+++.||||+.
T Consensus       239 ~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~-----~e~l~hp~~~~  279 (343)
T 3dbq_A          239 EIEFPDIPEKDLQDVLKCCLKRDPKQRISI-----PELLAHPYVQI  279 (343)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSHHHHS
T ss_pred             ccCCcccCCHHHHHHHHHHcCCChhHCCCH-----HHHHhCccccc
Confidence            456777888999999999999999999998     99999999973

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=97.52  E-value=6.9e-05  Score=54.68  Aligned_cols=67  Identities=19%  Similarity=0.248  Sum_probs=36.9

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC--CCChhhhccCCCCCCCChhHHhcCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ--RGGIVDIKKHKWFQGFDWDGLRNQTLT   71 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~--~~g~~~i~~hp~f~~v~w~~l~~~~~~   71 (126)
                      ++..+. .+ .....|..++.++++||.+||..||.+|++..  ..-+++++.|+|+.....+.+......
T Consensus       248 ~~~~~~-~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~~~~~~  316 (323)
T 3qup_A          248 IYNYLI-GG-NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYINIER  316 (323)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----------------
T ss_pred             HHHHHh-cC-CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCc
Confidence            445555 32 24567788999999999999999999999830  011278899999998877766655543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.52  E-value=5e-05  Score=55.29  Aligned_cols=41  Identities=24%  Similarity=0.447  Sum_probs=36.7

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ...+|...+.++++||.+||..||.+|+++     .+++.||||+.
T Consensus       258 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~h~~~~~  298 (313)
T 3cek_A          258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISI-----PELLAHPYVQI  298 (313)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSHHHHC
T ss_pred             ccCCcccchHHHHHHHHHHccCCcccCcCH-----HHHhcCccccC
Confidence            345677789999999999999999999998     99999999974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=97.51  E-value=3.3e-05  Score=57.35  Aligned_cols=33  Identities=15%  Similarity=0.260  Sum_probs=30.3

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+..+++||.+||+.||.+|+++     .+++.||||+
T Consensus       328 ~~~~l~~li~~~L~~dP~~Rpta-----~elL~hp~f~  360 (360)
T 3llt_A          328 KHELFCDFLYSILQIDPTLRPSP-----AELLKHKFLE  360 (360)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCH-----HHHTTSGGGC
T ss_pred             hHHHHHHHHHHHhcCChhhCCCH-----HHHhcCcccC
Confidence            35788899999999999999998     9999999995

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=97.50  E-value=2.2e-05  Score=57.23  Aligned_cols=35  Identities=23%  Similarity=0.356  Sum_probs=31.6

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .+.++++||.+||..||.+|+++     .+++.||||+.+
T Consensus       301 ~~~~l~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~  335 (339)
T 1z57_A          301 EHERLFDLIQKMLEYDPAKRITL-----REALKHPFFDLL  335 (339)
T ss_dssp             HHHHHHHHHHHHTCSSTTTSCCH-----HHHTTSGGGGGG
T ss_pred             hHHHHHHHHHHHhCcCcccccCH-----HHHhcCHHHHHH
Confidence            35788999999999999999998     999999999854

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=97.49  E-value=1.4e-05  Score=57.14  Aligned_cols=39  Identities=18%  Similarity=0.436  Sum_probs=35.4

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ..++..+++||.+||..||.+|+++     .+++.||||+.+.+
T Consensus       236 ~~~~~~~~~li~~~l~~dp~~Rps~-----~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          236 SNTSELAKDFIRRLLVKDPKRRMTI-----AQSLEHSWIKAIRR  274 (283)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSCCH-----HHHHHCHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcCH-----HHHHhCHHHHHHHH
Confidence            5689999999999999999999998     99999999986544

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=97.49  E-value=2.4e-05  Score=56.86  Aligned_cols=45  Identities=13%  Similarity=0.177  Sum_probs=39.1

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHh
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLR   66 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~   66 (126)
                      .|..++..+++||.+||..||.+|+++     .+++.||||++..+..+.
T Consensus       247 ~~~~~~~~l~~li~~~l~~dp~~Rpt~-----~~ll~~~~~~~~~~~~~~  291 (314)
T 3com_A          247 KPELWSDNFTDFVKQCLVKSPEQRATA-----TQLLQHPFVRSAKGVSIL  291 (314)
T ss_dssp             SGGGSCHHHHHHHHHHTCSCTTTSCCH-----HHHTTSHHHHTCCCGGGG
T ss_pred             CcccCCHHHHHHHHHHccCChhhCcCH-----HHHHhCHHHhcCCcchHH
Confidence            345679999999999999999999998     999999999988765544

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=97.47  E-value=5.8e-05  Score=55.08  Aligned_cols=42  Identities=17%  Similarity=0.215  Sum_probs=37.9

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      +..++..+++||.+||..||.+|+++     .+|+.||||++..+..
T Consensus       256 ~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~hp~~~~~~~~~  297 (326)
T 2x7f_A          256 SKKWSKKFQSFIESCLVKNHSQRPAT-----EQLMKHPFIRDQPNER  297 (326)
T ss_dssp             CSCSCHHHHHHHHHHCCSSGGGSCCH-----HHHHTSHHHHCCTTHH
T ss_pred             ccccCHHHHHHHHHHhccChhhCCCH-----HHHhhChHHhhCcccc
Confidence            35689999999999999999999998     9999999999887754

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=97.47  E-value=5.9e-05  Score=54.01  Aligned_cols=35  Identities=17%  Similarity=0.333  Sum_probs=33.0

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||+
T Consensus       237 ~~~~~~~~~li~~~l~~~p~~Rpt~-----~e~l~hp~f~  271 (290)
T 3fme_A          237 DKFSAEFVDFTSQCLKKNSKERPTY-----PELMQHPFFT  271 (290)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCH-----HHHTTSHHHH
T ss_pred             ccCCHHHHHHHHHHhhcChhhCcCH-----HHHHhCcccc
Confidence            4689999999999999999999998     9999999996

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=97.41  E-value=4.2e-05  Score=55.49  Aligned_cols=36  Identities=25%  Similarity=0.551  Sum_probs=33.4

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||..
T Consensus       227 ~~~~~~~~~li~~~l~~dP~~Rps~-----~e~l~hp~~~~  262 (299)
T 3m2w_A          227 SEVSEEVKMLIRNLLKTEPTQRMTI-----TEFMNHPWIMQ  262 (299)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSHHHHT
T ss_pred             ccCCHHHHHHHHHHcccChhhCCCH-----HHHhcChhhcc
Confidence            4689999999999999999999988     99999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=97.39  E-value=3.4e-05  Score=57.20  Aligned_cols=36  Identities=33%  Similarity=0.610  Sum_probs=33.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||..
T Consensus       258 ~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~  293 (336)
T 3fhr_A          258 SEVSEDAKQLIRLLLKTDPTERLTI-----TQFMNHPWINQ  293 (336)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCH-----HHHHHSHHHHT
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCH-----HHHhcCccccc
Confidence            4689999999999999999999998     99999999974

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=97.37  E-value=0.0001  Score=54.08  Aligned_cols=61  Identities=11%  Similarity=0.091  Sum_probs=33.0

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhh-------------------------ccCCCCCCCChhHHhcC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI-------------------------KKHKWFQGFDWDGLRNQ   68 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i-------------------------~~hp~f~~v~w~~l~~~   68 (126)
                      ....|..++.++.+||.+||..||.+|++.     .+|                         ..+|.+.+++|..+..+
T Consensus       235 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  309 (325)
T 3kex_A          235 RLAQPQICTIDVYMVMVKCWMIDENIRPTF-----KELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEV  309 (325)
T ss_dssp             BCCCCTTBCTTTTHHHHHHTCSCTTTSCCH-----HHHHHHHHHHTTSHHHHBCCCSSSSCCCBCCCCCCC---------
T ss_pred             CCCCCCcCcHHHHHHHHHHcCCChhhCcCH-----HHHHHHHHHHHhcchhhhccccCCCCCCCCCCccccchhhccccc
Confidence            456677889999999999999999999876     444                         34677777777777777


Q ss_pred             CCCCCcccCCC
Q psy3183          69 TLTPPIIPVIK   79 (126)
Q Consensus        69 ~~~ppf~P~~~   79 (126)
                      .+.|++.|...
T Consensus       310 ~~~~~~~~~~d  320 (325)
T 3kex_A          310 ELEPELDLDLD  320 (325)
T ss_dssp             -----------
T ss_pred             ccchhccCCcc
Confidence            77777766643

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=97.35  E-value=0.00014  Score=53.46  Aligned_cols=37  Identities=14%  Similarity=0.287  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++..+++||.+||..||.+|+++     .+++.||||...
T Consensus       265 ~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~hp~~~~~  301 (321)
T 2c30_A          265 HKVSPVLRDFLERMLVRDPQERATA-----QELLDHPFLLQT  301 (321)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGGGC
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCH-----HHHhcChhhccC
Confidence            4688999999999999999999988     999999999754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=97.34  E-value=0.00019  Score=51.10  Aligned_cols=48  Identities=13%  Similarity=0.085  Sum_probs=39.5

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ...|. .+ ....+|..++.++++||.+||..||.+|++.     .+|+.|+|+.
T Consensus       225 ~~~i~-~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~ll~~~~~~  272 (279)
T 2w5a_A          225 AGKIR-EG-KFRRIPYRYSDELNEIITRMLNLKDYHRPSV-----EEILENPLIL  272 (279)
T ss_dssp             HHHHH-HT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSTTCC
T ss_pred             HHHHh-hc-ccccCCcccCHHHHHHHHHHcCCCcccCCCH-----HHHHhChhhh
Confidence            44555 33 2335677899999999999999999999988     9999999986

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=97.25  E-value=4.2e-05  Score=57.43  Aligned_cols=37  Identities=11%  Similarity=0.262  Sum_probs=34.2

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||+.+
T Consensus       330 ~~~~~~~~~li~~~L~~dp~~Rpt~-----~e~l~hp~f~~~  366 (377)
T 3byv_A          330 KNIPQPVRALLEGFLRYPKEDRLLP-----LQAMETPEYEQL  366 (377)
T ss_dssp             CCCCHHHHHHHHHHTCSSGGGCCCH-----HHHHTSHHHHHH
T ss_pred             cCCCHHHHHHHHHHcCCCchhCCCH-----HHHhhChHHHHH
Confidence            5789999999999999999999998     999999999754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=97.22  E-value=0.00019  Score=51.97  Aligned_cols=37  Identities=16%  Similarity=0.292  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..++.++++||.+||..||.+|+++     .+|+.||||+.+
T Consensus       254 ~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~h~~~~~~  290 (318)
T 2dyl_A          254 MGFSGDFQSFVKDCLTKDHRKRPKY-----NKLLEHSFIKRY  290 (318)
T ss_dssp             SCCCHHHHHHHHHHTCSCTTTSCCH-----HHHTTSHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCH-----HHHhhCHHHHhc
Confidence            3579999999999999999999998     999999999743

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=97.17  E-value=8.4e-05  Score=57.11  Aligned_cols=35  Identities=20%  Similarity=0.297  Sum_probs=31.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ++.++++||.+||..||.+|+++     .+|+.||||.+.
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~-----~eil~hp~f~~~  302 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTA-----MKVLRHPLFWPK  302 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGSCH
T ss_pred             chHHHHHHHHHHhhCChhhCCCH-----HHHHhCCccCCc
Confidence            45789999999999999999998     999999999754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=97.16  E-value=0.0002  Score=51.77  Aligned_cols=40  Identities=15%  Similarity=0.261  Sum_probs=35.8

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ...++..++..+++||.+||..||.+|+++     .+|+.||||.
T Consensus       236 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~~~~~~  275 (303)
T 3a7i_A          236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTA-----KELLKHKFIL  275 (303)
T ss_dssp             CCCCCSSCCHHHHHHHHHHCCSSGGGSCCH-----HHHTTCHHHH
T ss_pred             CCCCccccCHHHHHHHHHHcCCChhhCcCH-----HHHhhChhhh
Confidence            345667889999999999999999999988     9999999996

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=97.03  E-value=0.00033  Score=52.22  Aligned_cols=38  Identities=13%  Similarity=0.194  Sum_probs=34.3

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +..++..+++||.+||..||.+|+++     .+|+.||||...
T Consensus       275 ~~~~~~~l~~li~~~l~~dP~~Rps~-----~~ll~h~~~~~~  312 (348)
T 1u5q_A          275 SGHWSEYFRNFVDSCLQKIPQDRPTS-----EVLLKHRFVLRE  312 (348)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHTTCHHHHSC
T ss_pred             CCCCCHHHHHHHHHHcccChhhCcCH-----HHHhhChhhhcc
Confidence            45789999999999999999999998     999999999643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=96.95  E-value=0.00024  Score=51.90  Aligned_cols=38  Identities=11%  Similarity=0.239  Sum_probs=34.4

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .++.++++||.+||..||.+|+++     .+|+.||||....+
T Consensus       257 ~~~~~l~~li~~~l~~dp~~Rps~-----~ell~hp~~~~~~~  294 (327)
T 3aln_A          257 EFSPSFINFVNLCLTKDESKRPKY-----KELLKHPFILMYEE  294 (327)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCH-----HHHTTSHHHHHHHH
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCH-----HHHHhChHHHHhHh
Confidence            578999999999999999999998     99999999975544

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=96.94  E-value=0.00025  Score=51.60  Aligned_cols=52  Identities=13%  Similarity=0.202  Sum_probs=39.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC------CCCCCCChhHHhcCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH------KWFQGFDWDGLRNQTL   70 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h------p~f~~v~w~~l~~~~~   70 (126)
                      ....|..++..+++||.+||..||.+|++.     .+|..|      ++|..++|.......+
T Consensus       258 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~e~l~~L~~~~~~~~~~~~~~~~~~~~~  315 (322)
T 1p4o_A          258 LLDKPDNCPDMLFELMRMCWQYNPKMRPSF-----LEIISSIKEEMEPGFREVSFYYSEENKL  315 (322)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHHHGGGSCTTHHHHCSTTSTTC--
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHHHHHHhhccCCcccccccccccCC
Confidence            345677899999999999999999999987     777665      6776666655444443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=96.80  E-value=0.00027  Score=57.85  Aligned_cols=50  Identities=10%  Similarity=0.016  Sum_probs=39.2

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCccc
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP   76 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P   76 (126)
                      .++..+.+||.+||..||.+|++.     .+++.||||..  +..+..+++..+|..
T Consensus       269 ~ls~~L~dLI~~mL~~DP~kRPTa-----~elL~hp~F~~--l~~iL~~kil~~f~~  318 (676)
T 3qa8_A          269 ILAGKLERWLQCMLMWHQRQRGTD-----PQNPNVGCFQA--LDSILSLKLLSVMNM  318 (676)
T ss_dssp             GGHHHHHHHHHHHSCSSCC---CC-----TTCCCCTTHHH--HHHHHCCCEEECCCS
T ss_pred             hhhHHHHHHHHHHccCCHhhCcCH-----HHHhcCHHHHH--HHHHHhccccccccc
Confidence            356899999999999999999998     99999999985  677788776555543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=96.66  E-value=0.0011  Score=49.62  Aligned_cols=46  Identities=13%  Similarity=0.335  Sum_probs=38.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +++..|. ++ ..+..|..+++++.+||.+||..||.+|+++     .+|..+
T Consensus       268 ~~~~~i~-~g-~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~-----~ei~~~  313 (329)
T 4aoj_A          268 EAIDCIT-QG-RELERPRACPPEVYAIMRGCWQREPQQRHSI-----KDVHAR  313 (329)
T ss_dssp             HHHHHHH-HT-CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCH-----HHHHHH
T ss_pred             HHHHHHH-cC-CCCCCcccccHHHHHHHHHHcCcChhHCcCH-----HHHHHH
Confidence            3566777 44 3678889999999999999999999999987     888654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=96.54  E-value=0.00064  Score=51.81  Aligned_cols=38  Identities=11%  Similarity=0.253  Sum_probs=34.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      ..++.++++||.+||..||.+|+++     .+++.||||+.+.
T Consensus       334 ~~~~~~~~~li~~~l~~dP~~Rpt~-----~~~l~~~~~~~~~  371 (413)
T 3dzo_A          334 KNIPQPVRALLEGFLRYPKEDRLLP-----LQAMETPEYEQLR  371 (413)
T ss_dssp             CCCCHHHHHHHHHHTCSSGGGSCCH-----HHHTTSHHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCH-----HHHHhCHHHHHHH
Confidence            4688999999999999999999998     9999999998653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=96.48  E-value=0.0016  Score=49.23  Aligned_cols=44  Identities=14%  Similarity=0.258  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      .+.|. .+ ..+..|..+++++.+||.+||..||.+|++.     .+|..|
T Consensus       298 ~~~i~-~g-~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~-----~eil~~  341 (353)
T 4ase_A          298 CRRLK-EG-TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-----SELVEH  341 (353)
T ss_dssp             HHHHH-HT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHH-cC-CCCCCCccCCHHHHHHHHHHcCcChhHCcCH-----HHHHHH
Confidence            34444 43 3577888999999999999999999999987     888877

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=96.37  E-value=0.0029  Score=46.60  Aligned_cols=43  Identities=16%  Similarity=0.242  Sum_probs=36.2

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhh
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI   51 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i   51 (126)
                      +++..|. ++ ..+..|..++.++.+||.+||..||.+|++.     .+|
T Consensus       238 ~~~~~i~-~~-~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~-----~~i  280 (299)
T 4asz_A          238 EVIECIT-QG-RVLQRPRTCPQEVYELMLGCWQREPHMRKNI-----KGI  280 (299)
T ss_dssp             HHHHHHH-HT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             HHHHHHH-cC-CCCCCCccchHHHHHHHHHHcCCChhHCcCH-----HHH
Confidence            4566777 44 3567888999999999999999999999987     777

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=96.02  E-value=0.0046  Score=45.72  Aligned_cols=46  Identities=22%  Similarity=0.317  Sum_probs=37.4

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++...|. ++ ..+..|..++.++.+||.+|+..||.+|++.     .+|..+
T Consensus       255 ~~~~~i~-~~-~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~-----~ei~~~  300 (308)
T 4gt4_A          255 DVVEMIR-NR-QVLPCPDDCPAWVYALMIECWNEFPSRRPRF-----KDIHSR  300 (308)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHH-cC-CCCCCcccchHHHHHHHHHHcCCChhHCcCH-----HHHHHH
Confidence            4566777 44 3566788999999999999999999999987     787654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=96.00  E-value=0.0042  Score=48.62  Aligned_cols=53  Identities=15%  Similarity=0.153  Sum_probs=38.4

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhh----------ccCCCCCCCChhHHhcCCCCCCccc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDI----------KKHKWFQGFDWDGLRNQTLTPPIIP   76 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i----------~~hp~f~~v~w~~l~~~~~~ppf~P   76 (126)
                      ..++.++.+||.+||..+|.+|++.     .+|          ..|+|+..+||..+..++..++..|
T Consensus       242 ~~~p~~l~~li~~cl~~dP~~RPs~-----~el~~~L~~l~~~~~~~~~~~~dW~~~~~~~~~~~~~p  304 (483)
T 3sv0_A          242 RGYPTEFASYFHYCRSLRFDDKPDY-----SYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIASAP  304 (483)
T ss_dssp             TTSCHHHHHHHHHHHTCCTTCCCCH-----HHHHHHHHHHHHHTTCCCSSCCHHHHHTC---------
T ss_pred             cCCcHHHHHHHHHHhcCChhhCcCH-----HHHHHHHHHHHHHcCCCccCCcCchhhccccccccCCC
Confidence            5678999999999999999999986     433          4589999999999887776555444

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=95.73  E-value=0.0069  Score=43.22  Aligned_cols=45  Identities=11%  Similarity=0.218  Sum_probs=35.8

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +...|. .+ ....+|..++.++++||.+||..+|.+|++.     .+|..|
T Consensus       222 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~~~  266 (287)
T 1u59_A          222 VMAFIE-QG-KRMECPPECPPELYALMSDCWIYKWEDRPDF-----LTVEQR  266 (287)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHh-cC-CcCCCCCCcCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            344555 33 2456788899999999999999999999987     888766

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=95.63  E-value=0.0061  Score=43.36  Aligned_cols=42  Identities=14%  Similarity=0.220  Sum_probs=33.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc----------CCCCCCCChhHH
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK----------HKWFQGFDWDGL   65 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~----------hp~f~~v~w~~l   65 (126)
                      ..++.++++||.+||..+|.+|++.     .+|..          ..+-..+||+.+
T Consensus       244 ~~~~~~l~~li~~~l~~~p~~Rpt~-----~~l~~~l~~~~~~~~~~~~~~~dw~~~  295 (296)
T 4hgt_A          244 KGYPSEFATYLNFCRSLRFDDKPDY-----SYLRQLFRNLFHRQGFSYDYVFDWNML  295 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCH-----HHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred             ccCCHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHHhCCCccCccchhhc
Confidence            5679999999999999999999987     66543          456666777654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=95.61  E-value=0.005  Score=44.86  Aligned_cols=48  Identities=13%  Similarity=0.280  Sum_probs=38.1

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ...+. .+ .....|..++..+++||.+||..||.+|+++     .+|+.|.++.
T Consensus       255 ~~~~~-~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~~l~~~  302 (327)
T 2yfx_A          255 LEFVT-SG-GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF-----AIILERIEYC  302 (327)
T ss_dssp             HHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHHHHHH
T ss_pred             HHHHh-cC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcCH-----HHHHHHHHHH
Confidence            34454 32 2455677899999999999999999999988     9999987754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=95.60  E-value=0.0088  Score=42.18  Aligned_cols=45  Identities=13%  Similarity=0.289  Sum_probs=34.2

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +...+. .+ .....|..++.++++||.+||..+|.+|++.     .+++.|
T Consensus       216 ~~~~~~-~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~ll~~  260 (269)
T 4hcu_A          216 VVEDIS-TG-FRLYKPRLASTHVYQIMNHCWRERPEDRPAF-----SRLLRQ  260 (269)
T ss_dssp             HHHHHH-TT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHh-cC-ccCCCCCcCCHHHHHHHHHHccCCcccCcCH-----HHHHHH
Confidence            344455 32 2445667789999999999999999999987     777655

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=95.56  E-value=0.0094  Score=42.38  Aligned_cols=44  Identities=23%  Similarity=0.420  Sum_probs=34.2

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +...|. .+ ....+|..++.++++||.+||..||.+|++.     .+|..
T Consensus       226 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~~  269 (281)
T 1mp8_A          226 VIGRIE-NG-ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF-----TELKA  269 (281)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHH-cC-CCCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence            344555 32 2456778899999999999999999999987     77754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=95.53  E-value=0.0088  Score=42.94  Aligned_cols=45  Identities=22%  Similarity=0.446  Sum_probs=34.6

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++..+. .+ .....|..++.++++||.+||..||.+|+++     .+|..+
T Consensus       261 ~~~~~~-~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~l~~~  305 (314)
T 2ivs_A          261 LFNLLK-TG-HRMERPDNCSEEMYRLMLQCWKQEPDKRPVF-----ADISKD  305 (314)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHhh-cC-CcCCCCccCCHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            344454 32 2456677899999999999999999999987     777654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=95.36  E-value=0.0067  Score=45.29  Aligned_cols=49  Identities=12%  Similarity=0.274  Sum_probs=39.2

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ++..|. .+ .....|..++..+.+||.+||..+|.+|+++     .+|+.|.++.
T Consensus       295 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-----~eil~~l~~~  343 (367)
T 3l9p_A          295 VLEFVT-SG-GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF-----AIILERIEYC  343 (367)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHHHHHH
T ss_pred             HHHHHH-cC-CCCCCCccCCHHHHHHHHHHcCCCHhHCcCH-----HHHHHHHHHH
Confidence            445555 33 2456677899999999999999999999988     9999887764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=95.26  E-value=0.011  Score=43.34  Aligned_cols=36  Identities=14%  Similarity=0.282  Sum_probs=31.6

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..+++++.+||.+||..||.+|+++     .+|..|
T Consensus       314 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-----~ell~~  349 (359)
T 3vhe_A          314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-----SELVEH  349 (359)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCCCH-----HHHHHH
Confidence            456778899999999999999999999987     888765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=95.26  E-value=0.015  Score=40.94  Aligned_cols=36  Identities=17%  Similarity=0.399  Sum_probs=30.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ...+|..++..+++||.+||..||.+|+++     .++..|
T Consensus       232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e~l~~  267 (271)
T 3dtc_A          232 ALPIPSTCPEPFAKLMEDCWNPDPHSRPSF-----TNILDQ  267 (271)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCcccCHHHHHHHHHHhcCCcccCcCH-----HHHHHH
Confidence            345667889999999999999999999987     777654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=95.26  E-value=0.013  Score=41.57  Aligned_cols=36  Identities=11%  Similarity=0.188  Sum_probs=30.6

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|...+..+++||.+||..+|.+|++.     .+++.|
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~ll~~  274 (283)
T 3gen_A          239 RLYRPHLASEKVYTIMYSCWHEKADERPTF-----KILLSN  274 (283)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHccCChhHCcCH-----HHHHHH
Confidence            345567789999999999999999999987     777765

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=95.25  E-value=0.014  Score=40.92  Aligned_cols=45  Identities=13%  Similarity=0.289  Sum_probs=33.6

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +...|. .+ .....|...+..+++||.+||..+|.+|++.     .++..+
T Consensus       214 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~ll~~  258 (267)
T 3t9t_A          214 VVEDIS-TG-FRLYKPRLASTHVYQIMNHCWRERPEDRPAF-----SRLLRQ  258 (267)
T ss_dssp             HHHHHH-TT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHh-cC-CcCCCCccCcHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            344555 32 2344567789999999999999999999987     777643

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=95.25  E-value=0.015  Score=41.30  Aligned_cols=34  Identities=15%  Similarity=0.415  Sum_probs=29.1

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +..+..++.++++||.+||..||.+|++.     .+|..
T Consensus       244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~~  277 (291)
T 1u46_A          244 LPRPEDCPQDIYNVMVQCWAHKPEDRPTF-----VALRD  277 (291)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCcCcCHHHHHHHHHHccCCcccCcCH-----HHHHH
Confidence            44556789999999999999999999987     77764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=95.23  E-value=0.0039  Score=45.20  Aligned_cols=35  Identities=6%  Similarity=0.135  Sum_probs=31.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..++.++.+||.+||..||.+|++.     .+++.|+|++
T Consensus       244 ~~~~~~l~~li~~~l~~dP~~R~~~-----~~~l~~~l~~  278 (311)
T 3ork_A          244 EGLSADLDAVVLKALAKNPENRYQT-----AAEMRADLVR  278 (311)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCSS-----HHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhcCHhhChhh-----HHHHHHHHHH
Confidence            4589999999999999999999998     8999998875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=95.19  E-value=0.0099  Score=43.27  Aligned_cols=36  Identities=19%  Similarity=0.350  Sum_probs=31.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..++.++++||.+||..+|.+|++.     .++..|
T Consensus       259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~~  294 (327)
T 1fvr_A          259 RLEKPLNCDDEVYDLMRQCWREKPYERPSF-----AQILVS  294 (327)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            345667889999999999999999999987     888765

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=95.18  E-value=0.014  Score=42.36  Aligned_cols=36  Identities=19%  Similarity=0.410  Sum_probs=30.7

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..++.++++||.+||..||.+|+++     .+|+.|
T Consensus       262 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-----~ell~~  297 (327)
T 3lxl_A          262 RLPAPPACPAEVHELMKLCWAPSPQDRPSF-----SALGPQ  297 (327)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCcccHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            455677899999999999999999999988     777544

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=95.15  E-value=0.015  Score=43.56  Aligned_cols=45  Identities=11%  Similarity=0.336  Sum_probs=35.4

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +.+.+. .+ .....|..++.++++||.+||..||.+|+++     .+|..+
T Consensus       302 ~~~~~~-~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-----~ell~~  346 (382)
T 3tt0_A          302 LFKLLK-EG-HRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-----KQLVED  346 (382)
T ss_dssp             HHHHHH-TT-CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHH-cC-CCCCCCccCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            344555 32 3456678899999999999999999999987     888765

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=95.14  E-value=0.013  Score=42.05  Aligned_cols=36  Identities=14%  Similarity=0.282  Sum_probs=31.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..++++++++|.+||..||.+|+++     .+|..|
T Consensus       269 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~~  304 (316)
T 2xir_A          269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-----SELVEH  304 (316)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            456677899999999999999999999987     888765

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=95.13  E-value=0.013  Score=42.26  Aligned_cols=45  Identities=11%  Similarity=0.357  Sum_probs=34.7

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++..+. .+ .....|..++.++++||.+||..||.+|+++     .+|+.|
T Consensus       258 ~~~~~~-~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~l~~~  302 (313)
T 3brb_A          258 MYDYLL-HG-HRLKQPEDCLDELYEIMYSCWRTDPLDRPTF-----SVLRLQ  302 (313)
T ss_dssp             HHHHHH-TT-CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHH-cC-CCCCCCccccHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            344555 32 2456677899999999999999999999987     777654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=95.10  E-value=0.015  Score=40.87  Aligned_cols=36  Identities=14%  Similarity=0.243  Sum_probs=30.3

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|...+..+++||.+||..+|.+|+++     .+|+.|
T Consensus       223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~ll~~  258 (268)
T 3sxs_A          223 RLYRPHLASDTIYQIMYSCWHELPEKRPTF-----QQLLSS  258 (268)
T ss_dssp             CCCCCTTSCHHHHHHHHHTTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCcChHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            344566789999999999999999999987     777655

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=95.10  E-value=0.019  Score=40.10  Aligned_cols=35  Identities=23%  Similarity=0.338  Sum_probs=30.0

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ...+|..++.++++||.+||..||.+|+++     .+|..
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~  263 (271)
T 3kmu_A          229 RPTIPPGISPHVSKLMKICMNEDPAKRPKF-----DMIVP  263 (271)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            456778899999999999999999999987     66653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=95.09  E-value=0.02  Score=40.92  Aligned_cols=34  Identities=15%  Similarity=0.418  Sum_probs=29.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....|..++.++++||.+||..||.+|+++     .++.
T Consensus       261 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll  294 (302)
T 4e5w_A          261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSF-----QNLI  294 (302)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCCCCCH-----HHHH
Confidence            456678899999999999999999999987     6664

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=95.09  E-value=0.0022  Score=46.59  Aligned_cols=31  Identities=3%  Similarity=0.097  Sum_probs=27.1

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHK   55 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp   55 (126)
                      .++..+++||.+||..||.+|+++     .+++.||
T Consensus       274 ~~~~~l~~ll~~~L~~dP~~R~s~-----~ell~h~  304 (319)
T 4euu_A          274 GLQVLLTPVLANILEADQEKCWGF-----DQFFAET  304 (319)
T ss_dssp             HHHHHHHHHHHHHSCCCTTTSCCH-----HHHHHHH
T ss_pred             hHHHHhHHHHHHhccCChhhhccH-----HHhhhcc
Confidence            345689999999999999999998     9998885

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=95.05  E-value=0.017  Score=42.05  Aligned_cols=44  Identities=16%  Similarity=0.330  Sum_probs=34.1

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +...|. .+ .....|..++.++.+||.+||..||.+|++.     .+|..
T Consensus       285 ~~~~~~-~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~~~~  328 (343)
T 1luf_A          285 VIYYVR-DG-NILACPENCPLELYNLMRLCWSKLPADRPSF-----CSIHR  328 (343)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHh-CC-CcCCCCCCCCHHHHHHHHHHcccCcccCCCH-----HHHHH
Confidence            344555 33 2345778899999999999999999999987     77754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=95.01  E-value=0.015  Score=41.22  Aligned_cols=36  Identities=14%  Similarity=0.319  Sum_probs=30.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..+++.+++||.+||..||.+|++.     .+|..+
T Consensus       232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~ell~~  267 (281)
T 3cc6_A          232 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRF-----TELVCS  267 (281)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHccCCchhCcCH-----HHHHHH
Confidence            455677899999999999999999999987     777654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=94.97  E-value=0.01  Score=41.85  Aligned_cols=37  Identities=14%  Similarity=0.241  Sum_probs=32.3

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      .++..++..+++||.+||..||.+|+++     .+++.|.+.
T Consensus       235 ~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~e~l~~l~~  271 (284)
T 2a19_B          235 IISDIFDKKEKTLLQKLLSKKPEDRPNT-----SEILRTLTV  271 (284)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHHHHH
T ss_pred             cccccCCHHHHHHHHHHccCChhhCcCH-----HHHHHHHHH
Confidence            3567789999999999999999999988     899888654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=94.95  E-value=0.026  Score=40.22  Aligned_cols=34  Identities=15%  Similarity=0.298  Sum_probs=29.6

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ...+|..++.++++||.+||..||.+|+++     .+|.
T Consensus       238 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~l~  271 (291)
T 1xbb_A          238 RMGCPAGCPREMYDLMNLCWTYDVENRPGF-----AAVE  271 (291)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            456778899999999999999999999987     6664

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=94.82  E-value=0.02  Score=41.82  Aligned_cols=36  Identities=11%  Similarity=0.158  Sum_probs=31.2

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..++.++.+||.+||..||.+|+++     .+|..|
T Consensus       293 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~l~~~  328 (344)
T 1rjb_A          293 KMDQPFYATEEIYIIMQSCWAFDSRKRPSF-----PNLTSF  328 (344)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCcCH-----HHHHHH
Confidence            445677889999999999999999999987     888765

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=94.66  E-value=0.028  Score=40.86  Aligned_cols=35  Identities=14%  Similarity=0.414  Sum_probs=31.0

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ...+|..+++++++||.+||..+|.+|++.     .+|+.
T Consensus       257 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-----~~ll~  291 (309)
T 3p86_A          257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSF-----ATIMD  291 (309)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence            566788899999999999999999999987     77764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=94.65  E-value=0.022  Score=42.60  Aligned_cols=45  Identities=11%  Similarity=0.332  Sum_probs=34.8

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++..+. .+ .....|..++.++.+||.+||..+|.+|+++     .+|..+
T Consensus       314 ~~~~~~-~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~-----~ell~~  358 (370)
T 2psq_A          314 LFKLLK-EG-HRMDKPANCTNELYMMMRDCWHAVPSQRPTF-----KQLVED  358 (370)
T ss_dssp             HHHHHH-TT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHh-cC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            445555 33 2456778899999999999999999999987     777643

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=94.60  E-value=0.034  Score=39.38  Aligned_cols=35  Identities=17%  Similarity=0.415  Sum_probs=29.8

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....|..++..+++||.+||..||.+|+++     .+|..
T Consensus       230 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~~~~  264 (288)
T 3kfa_A          230 RMERPEGCPEKVYELMRACWQWNPSDRPSF-----AEIHQ  264 (288)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhCCChhhCcCH-----HHHHH
Confidence            455677899999999999999999999987     66653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=94.57  E-value=0.03  Score=39.55  Aligned_cols=34  Identities=15%  Similarity=0.272  Sum_probs=29.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....|..+++.+.+||.+||..||.+|++.     .+|.
T Consensus       232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~  265 (278)
T 1byg_A          232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSF-----LQLR  265 (278)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhcCChhhCCCH-----HHHH
Confidence            455677899999999999999999999987     6654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=94.56  E-value=0.034  Score=39.64  Aligned_cols=34  Identities=12%  Similarity=0.300  Sum_probs=29.6

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....|..++.++.+||.+||..||.+|+++     .+|.
T Consensus       250 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~el~  283 (295)
T 3ugc_A          250 RLPRPDGCPDEIYMIMTECWNNNVNQRPSF-----RDLA  283 (295)
T ss_dssp             CCCCCTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHH
T ss_pred             cCCCCcCcCHHHHHHHHHHcCCChhhCCCH-----HHHH
Confidence            456678899999999999999999999987     6665

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=94.55  E-value=0.036  Score=39.13  Aligned_cols=35  Identities=17%  Similarity=0.343  Sum_probs=29.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....|..++.++.+||.+||..+|.+|++.     .+|..
T Consensus       228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~~  262 (279)
T 1qpc_A          228 RMVRPDNCPEELYQLMRLCWKERPEDRPTF-----DYLRS  262 (279)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCcccccHHHHHHHHHHhccChhhCCCH-----HHHHH
Confidence            345667889999999999999999999987     66653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=94.48  E-value=0.033  Score=39.47  Aligned_cols=34  Identities=15%  Similarity=0.263  Sum_probs=29.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ...+|..+++++++||.+||..||.+|++.     .+|.
T Consensus       248 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll  281 (287)
T 4f0f_A          248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHF-----SYIV  281 (287)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             CCCCCcccCHHHHHHHHHHhcCChhhCcCH-----HHHH
Confidence            445677899999999999999999999987     6665

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=94.38  E-value=0.026  Score=41.14  Aligned_cols=36  Identities=11%  Similarity=0.293  Sum_probs=30.8

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..++.++++||.+||..+|.+|+++     .+|..+
T Consensus       277 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~~  312 (334)
T 2pvf_A          277 RMDKPANCTNELYMMMRDCWHAVPSQRPTF-----KQLVED  312 (334)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            455677899999999999999999999987     777654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=94.34  E-value=0.042  Score=39.03  Aligned_cols=35  Identities=14%  Similarity=0.288  Sum_probs=29.6

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....|..++..+++||.+||..||.+|++.     .++..
T Consensus       246 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~ll~  280 (298)
T 3pls_A          246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTF-----RVLVG  280 (298)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCccchHHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence            455667899999999999999999999987     66653

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=94.31  E-value=0.0091  Score=43.69  Aligned_cols=29  Identities=21%  Similarity=0.390  Sum_probs=25.4

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc-cCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIK-KHKWFQ   58 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~-~hp~f~   58 (126)
                      .+|+++++||.+||++|     ++     .+++ .||||+
T Consensus       307 ~~s~~~~dli~~~L~~d-----sa-----~e~l~~Hp~f~  336 (336)
T 2vuw_A          307 QIKRKIQEFHRTMLNFS-----SA-----TDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHHHHGGGSS-----SH-----HHHHHHCGGGC
T ss_pred             hcCHHHHHHHHHHhccC-----CH-----HHHHhcCCCcC
Confidence            47899999999999976     44     9999 999995

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=94.21  E-value=0.045  Score=39.95  Aligned_cols=35  Identities=17%  Similarity=0.316  Sum_probs=29.9

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....|..++..+.+||.+||..||.+|++.     .+|..
T Consensus       272 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~eil~  306 (325)
T 3kul_A          272 RLPAPMGCPHALHQLMLDCWHKDRAQRPRF-----SQIVS  306 (325)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCCCcCHHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence            455677899999999999999999999987     66653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=94.17  E-value=0.035  Score=40.62  Aligned_cols=45  Identities=20%  Similarity=0.262  Sum_probs=33.9

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +.+.|. .+ ..+..|..++..+.+||.+||..+|.+|++.     .+|..+
T Consensus       259 ~~~~~~-~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~~~  303 (333)
T 1mqb_A          259 VMKAIN-DG-FRLPTPMDCPSAIYQLMMQCWQQERARRPKF-----ADIVSI  303 (333)
T ss_dssp             HHHHHH-TT-CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCH-----HHHHHH
T ss_pred             HHHHHH-CC-CcCCCcccCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            344555 32 2445567889999999999999999999987     777654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=94.15  E-value=0.047  Score=39.53  Aligned_cols=34  Identities=15%  Similarity=0.289  Sum_probs=29.6

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ....|..++.++.+||.+||..||.+|+++     .+|.
T Consensus       269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-----~ell  302 (318)
T 3lxp_A          269 RLPRPDKCPAEVYHLMKNCWETEASFRPTF-----ENLI  302 (318)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCCcccCcCH-----HHHH
Confidence            455677899999999999999999999987     6765

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=94.03  E-value=0.047  Score=41.85  Aligned_cols=43  Identities=14%  Similarity=0.212  Sum_probs=34.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +...|. ++ ..+..|..+++++.+||.+||..||.+|++.     .+|.
T Consensus       395 ~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~-----~~l~  437 (450)
T 1k9a_A          395 VVPRVE-KG-YKMDAPDGCPPAVYDVMKNCWHLDAATRPTF-----LQLR  437 (450)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             HHHHHH-cC-CCCCCCCcCCHHHHHHHHHHcCCChhHCcCH-----HHHH
Confidence            445555 43 3566778899999999999999999999987     6664

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=94.03  E-value=0.05  Score=39.49  Aligned_cols=34  Identities=12%  Similarity=0.300  Sum_probs=29.2

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      .+..|..++.++.+||.+||..||.+|+++     .+|.
T Consensus       281 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~el~  314 (326)
T 2w1i_A          281 RLPRPDGCPDEIYMIMTECWNNNVNQRPSF-----RDLA  314 (326)
T ss_dssp             CCCCCTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHH
T ss_pred             CCCCCCcccHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            345677899999999999999999999987     6665

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=94.02  E-value=0.024  Score=40.28  Aligned_cols=25  Identities=8%  Similarity=0.017  Sum_probs=23.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..++.++.+||.+||..||.+|+++
T Consensus       244 ~~~~~~l~~li~~~l~~dp~~Rps~  268 (296)
T 3uzp_A          244 KGYPSEFATYLNFCRSLRFDDKPDY  268 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCH
T ss_pred             hhCCHHHHHHHHHHHhcCcCcCCCH
Confidence            6789999999999999999999987

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=94.01  E-value=0.024  Score=41.26  Aligned_cols=44  Identities=16%  Similarity=0.317  Sum_probs=33.2

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhcc----------CCCCCCCChhHHhcCCCCCCc
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKK----------HKWFQGFDWDGLRNQTLTPPI   74 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~----------hp~f~~v~w~~l~~~~~~ppf   74 (126)
                      +++++||.+||..+|.+|++.     .+|..          ......++|.   .+.+++|+
T Consensus       249 p~~~~li~~~l~~~p~~RP~~-----~~l~~~l~~~~~~~~~~~~~~~dw~---~~~~~~p~  302 (330)
T 2izr_A          249 PEMATYLRYVRRLDFFEKPDY-----DYLRKLFTDLFDRKGYMFDYEYDWI---GKQLPTPV  302 (330)
T ss_dssp             HHHHHHHHHHHHCCTTCCCCH-----HHHHHHHHHHHHHTTCCCSCCCTTT---TSCCCCCC
T ss_pred             hHHHHHHHHHHhCCCCCCCCH-----HHHHHHHHHHHHHcCCCCCCCccCC---CCCcCCCC
Confidence            399999999999999999986     55543          3455578997   45555665

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=93.95  E-value=0.023  Score=42.04  Aligned_cols=32  Identities=19%  Similarity=0.239  Sum_probs=27.5

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .|..++.++++||.+||..||.+|+++     .+|..
T Consensus       262 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ei~~  293 (307)
T 3omv_A          262 LYKNCPKAMKRLVADCVKKVKEERPLF-----PQILS  293 (307)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSSTTSCCH-----HHHHH
T ss_pred             ccccchHHHHHHHHHHcCCCHhHCcCH-----HHHHH
Confidence            446789999999999999999999987     77654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=93.87  E-value=0.038  Score=39.52  Aligned_cols=35  Identities=17%  Similarity=0.311  Sum_probs=29.4

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ...|..++.++++||.+||..||.+|+++     .+|..+
T Consensus       267 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~~  301 (313)
T 1t46_A          267 MLSPEHAPAEMYDIMKTCWDADPLKRPTF-----KQIVQL  301 (313)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHcCCCchhCcCH-----HHHHHH
Confidence            34467789999999999999999999987     777653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=93.76  E-value=0.017  Score=40.96  Aligned_cols=36  Identities=17%  Similarity=0.266  Sum_probs=30.7

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ...+|...+.++++||.+||..||.+|+++     .+|..|
T Consensus       234 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~~  269 (289)
T 4fvq_A          234 RHQLPAPKAAELANLINNCMDYEPDHRPSF-----RAIIRD  269 (289)
T ss_dssp             TCCCCCCSSCTTHHHHHHHSCSSGGGSCCH-----HHHHHH
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhHCcCH-----HHHHHH
Confidence            455677788999999999999999999987     788755

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=93.76  E-value=0.044  Score=39.93  Aligned_cols=36  Identities=11%  Similarity=0.148  Sum_probs=31.1

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|...+.++.+||.+||..+|.+|+++     .+|..|
T Consensus       237 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~ell~~  272 (327)
T 3poz_A          237 RLPQPPICTIDVYMIMVKCWMIDADSRPKF-----RELIIE  272 (327)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSCGGGSCCH-----HHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCChhhCCCH-----HHHHHH
Confidence            455677899999999999999999999987     787765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=93.74  E-value=0.063  Score=38.18  Aligned_cols=35  Identities=6%  Similarity=0.126  Sum_probs=29.0

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....|..++..+.+||.+||..+|.+|++.     .+|..
T Consensus       250 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~ell~  284 (298)
T 3f66_A          250 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSF-----SELVS  284 (298)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            344567789999999999999999999987     66653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=93.71  E-value=0.062  Score=40.07  Aligned_cols=34  Identities=18%  Similarity=0.370  Sum_probs=29.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      .+..|..++.++.+||.+||..||.+|++.     .+|.
T Consensus       333 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~~i~  366 (377)
T 3cbl_A          333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSF-----STIY  366 (377)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCcCH-----HHHH
Confidence            456777899999999999999999999987     6664

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=93.70  E-value=0.059  Score=41.34  Aligned_cols=44  Identities=16%  Similarity=0.359  Sum_probs=34.0

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +...+. .+ ..+..|..++..+.+||.+||..||.+|++.     .+|..
T Consensus       390 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~~l~~  433 (452)
T 1fmk_A          390 VLDQVE-RG-YRMPCPPECPESLHDLMCQCWRKEPEERPTF-----EYLQA  433 (452)
T ss_dssp             HHHHHH-TT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHH-cC-CCCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence            344555 33 2456678899999999999999999999987     77754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=93.70  E-value=0.057  Score=39.42  Aligned_cols=35  Identities=11%  Similarity=0.190  Sum_probs=30.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....|..++.++.+||.+||..||.+|++.     .+|..
T Consensus       237 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~  271 (327)
T 3lzb_A          237 RLPQPPICTIDVYMIMRKCWMIDADSRPKF-----RELII  271 (327)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCChhHCcCH-----HHHHH
Confidence            455677899999999999999999999987     77765

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=93.64  E-value=0.047  Score=39.40  Aligned_cols=35  Identities=23%  Similarity=0.419  Sum_probs=29.6

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....+..++..+++||.+||..||.+|+++     .+|..
T Consensus       222 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ell~  256 (307)
T 2eva_A          222 RPPLIKNLPKPIESLMTRCWSKDPSQRPSM-----EEIVK  256 (307)
T ss_dssp             CCCCBTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCcccccCHHHHHHHHHHhcCChhhCcCH-----HHHHH
Confidence            344567789999999999999999999987     77765

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=93.64  E-value=0.049  Score=38.63  Aligned_cols=25  Identities=4%  Similarity=-0.095  Sum_probs=23.3

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..++.++++||.+||..||.+|++.
T Consensus       247 ~~~~~~l~~li~~~l~~dp~~RP~~  271 (298)
T 1csn_A          247 AGFPEEFYKYMHYARNLAFDATPDY  271 (298)
T ss_dssp             TTSCHHHHHHHHHHHHCCTTCCCCH
T ss_pred             hhCcHHHHHHHHHHhcCCcccCCCH
Confidence            4689999999999999999999987

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=93.32  E-value=0.044  Score=39.71  Aligned_cols=35  Identities=17%  Similarity=0.300  Sum_probs=29.5

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....|...+..+.+||.+||..||.+|+++     .+|..
T Consensus       285 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~~  319 (333)
T 2i1m_A          285 QMAQPAFAPKNIYSIMQACWALEPTHRPTF-----QQICS  319 (333)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhccChhhCcCH-----HHHHH
Confidence            344567789999999999999999999987     77764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=93.31  E-value=0.032  Score=40.12  Aligned_cols=32  Identities=9%  Similarity=0.116  Sum_probs=28.3

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +..++.++++||.+||..||.+|+++     .+|..|
T Consensus       269 ~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~~  300 (317)
T 2buj_A          269 SPRHSSALWQLLNSMMTVDPHQRPHI-----PLLLSQ  300 (317)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             cccCCHHHHHHHHHHhhcChhhCCCH-----HHHHHH
Confidence            35789999999999999999999987     888765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=93.27  E-value=0.066  Score=41.04  Aligned_cols=43  Identities=19%  Similarity=0.326  Sum_probs=32.9

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +.+.|. .+ ..+..|..++.++.+||.+||..||.+|++.     .+|.
T Consensus       394 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~-----~~i~  436 (454)
T 1qcf_A          394 VIRALE-RG-YRMPRPENCPEELYNIMMRCWKNRPEERPTF-----EYIQ  436 (454)
T ss_dssp             HHHHHH-HT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             HHHHHH-cC-CCCCCCCCCCHHHHHHHHHHccCChhHCcCH-----HHHH
Confidence            344454 32 2455677899999999999999999999987     6665

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=93.25  E-value=0.07  Score=38.24  Aligned_cols=30  Identities=13%  Similarity=0.246  Sum_probs=26.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..++.++++||.+||..||.+|++.     .+|..
T Consensus       261 ~~~~~~l~~li~~~l~~dp~~Rps~-----~~il~  290 (310)
T 2wqm_A          261 DHYSEELRQLVNMCINPDPEKRPDV-----TYVYD  290 (310)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             cccCHHHHHHHHHHcCCChhhCCCH-----HHHHH
Confidence            5689999999999999999999987     77764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=93.24  E-value=0.077  Score=41.23  Aligned_cols=44  Identities=16%  Similarity=0.385  Sum_probs=33.6

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +++.+. .+ ..+..|..++.++++||.+||..||.+|+++     .+|..
T Consensus       428 ~~~~~~-~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~el~~  471 (495)
T 1opk_A          428 VYELLE-KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSF-----AEIHQ  471 (495)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHH-cC-CCCCCCCCCCHHHHHHHHHHcCcChhHCcCH-----HHHHH
Confidence            344444 32 2456678899999999999999999999987     77653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=93.16  E-value=0.061  Score=40.28  Aligned_cols=36  Identities=6%  Similarity=0.128  Sum_probs=30.3

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ....|..++..+.+||.+||..+|.+|++.     .+|..+
T Consensus       314 ~~~~p~~~~~~l~~li~~cl~~dp~~RPs~-----~ell~~  349 (373)
T 3c1x_A          314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSF-----SELVSR  349 (373)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            345567889999999999999999999987     777654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=92.95  E-value=0.09  Score=41.30  Aligned_cols=44  Identities=16%  Similarity=0.359  Sum_probs=34.1

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +...|. .+ ..+..|..++.++.+||.+||..||.+|++.     .+|..
T Consensus       473 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~~l~~  516 (535)
T 2h8h_A          473 VLDQVE-RG-YRMPCPPECPESLHDLMCQCWRKEPEERPTF-----EYLQA  516 (535)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHH-cC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-----HHHHH
Confidence            445555 33 2455677899999999999999999999987     77754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=92.62  E-value=0.11  Score=41.82  Aligned_cols=43  Identities=16%  Similarity=0.311  Sum_probs=34.3

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +...|. .+ .....|..++.++.+||.+||..||.+|++.     .+|.
T Consensus       581 ~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~-----~~l~  623 (635)
T 4fl3_A          581 VTAMLE-KG-ERMGCPAGCPREMYDLMNLCWTYDVENRPGF-----AAVE  623 (635)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHH
T ss_pred             HHHHHH-cC-CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCH-----HHHH
Confidence            445555 43 3566788899999999999999999999987     6664

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=92.37  E-value=0.1  Score=42.25  Aligned_cols=44  Identities=23%  Similarity=0.420  Sum_probs=34.2

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +...|. .+ ....+|..++..+.+||.+||..||.+|++.     .+|..
T Consensus       601 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~-----~el~~  644 (656)
T 2j0j_A          601 VIGRIE-NG-ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF-----TELKA  644 (656)
T ss_dssp             HHHHHH-HT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHH-cC-CCCCCCccccHHHHHHHHHHcCCChhHCcCH-----HHHHH
Confidence            344555 32 3566788899999999999999999999987     67653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=92.30  E-value=0.12  Score=41.33  Aligned_cols=39  Identities=13%  Similarity=0.181  Sum_probs=32.4

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +...|. ++ ..+.+|..++.++.+||.+||..+|.+|++.
T Consensus       548 ~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~  586 (613)
T 2ozo_A          548 VMAFIE-QG-KRMECPPECPPELYALMSDCWIYKWEDRPDF  586 (613)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCH
T ss_pred             HHHHHH-cC-CCCCCCCcCCHHHHHHHHHHcCCChhHCcCH
Confidence            455666 44 3567788899999999999999999999987

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=91.82  E-value=0.12  Score=36.94  Aligned_cols=30  Identities=7%  Similarity=0.072  Sum_probs=26.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..++.++++||.+||..||.+|++.     .+|..
T Consensus       266 ~~~~~~l~~li~~~l~~~p~~Rpt~-----~~l~~  295 (319)
T 2y4i_B          266 IGMGKEISDILLFCWAFEQEERPTF-----TKLMD  295 (319)
T ss_dssp             SSCCTTHHHHHHHHHCSSTTTSCCH-----HHHHH
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCH-----HHHHH
Confidence            3578899999999999999999987     77654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=91.27  E-value=0.19  Score=37.07  Aligned_cols=54  Identities=13%  Similarity=0.073  Sum_probs=31.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc----------cCCCCCCCChhHHhcCCCCCCcccC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK----------KHKWFQGFDWDGLRNQTLTPPIIPV   77 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~----------~hp~f~~v~w~~l~~~~~~ppf~P~   77 (126)
                      ..++.++.+||.+||..+|.+|++.     .+|.          ...+-..++|..+....+.+|..+.
T Consensus       293 ~~~~~~~~~li~~cl~~~p~~RP~~-----~~l~~~l~~~~~~~~~~~~~~~dw~~~~~~~~~~~~~~~  356 (364)
T 3op5_A          293 ANAPGEIAKYMETVKLLDYTEKPLY-----ENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITK  356 (364)
T ss_dssp             TCCCHHHHHHHHHHHTCCTTCCCCH-----HHHHHHHHHHHHHTTCCCCCCCCC---------------
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCCCH-----HHHHHHHHHHHHHcCCCcCCccceEeccCCccchhhhhh
Confidence            4678999999999999999999987     5554          3456667889877777766654443

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=91.26  E-value=0.1  Score=37.02  Aligned_cols=29  Identities=17%  Similarity=0.257  Sum_probs=25.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ..++.++++||.+||..+|.+|++.     .+|+
T Consensus       252 ~~~~~~l~~li~~~l~~~p~~Rps~-----~ell  280 (289)
T 3og7_A          252 SNCPKRMKRLMAECLKKKRDERPSF-----PRIL  280 (289)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCH-----HHHH
Confidence            4678999999999999999999987     6665

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=90.98  E-value=0.16  Score=37.90  Aligned_cols=34  Identities=15%  Similarity=0.226  Sum_probs=28.3

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ...|..++..+.+||.+||..+|.+|++.     .+|..
T Consensus       269 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~-----~~i~~  302 (373)
T 2qol_A          269 LPPPMDCPAALYQLMLDCWQKDRNNRPKF-----EQIVS  302 (373)
T ss_dssp             CCCCTTCBHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCccccHHHHHHHHHHhCcChhhCcCH-----HHHHH
Confidence            34456788999999999999999999987     66654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=90.70  E-value=0.08  Score=37.99  Aligned_cols=32  Identities=16%  Similarity=0.386  Sum_probs=27.5

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .|..+++.+.+||.+||..||.+|++.     .+|..
T Consensus       244 ~~~~~~~~l~~li~~~l~~dP~~Rps~-----~~l~~  275 (310)
T 3s95_A          244 CPPNCPPSFFPITVRCCDLDPEKRPSF-----VKLEH  275 (310)
T ss_dssp             CCTTCCTTHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence            356788899999999999999999987     77754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=90.44  E-value=0.063  Score=38.65  Aligned_cols=31  Identities=26%  Similarity=0.412  Sum_probs=27.5

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ...+..+++||.+||..||.+|+++     .+++.|
T Consensus       272 ~~~~~~~~~li~~~l~~~p~~Rps~-----~e~l~~  302 (337)
T 3ll6_A          272 DTQYTVFHSLIRAMLQVNPEERLSI-----AEVVHQ  302 (337)
T ss_dssp             CCSSGGGHHHHHHHSCSSGGGSCCH-----HHHHHH
T ss_pred             cccchHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence            4567889999999999999999987     888876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=89.85  E-value=0.13  Score=37.04  Aligned_cols=28  Identities=11%  Similarity=0.119  Sum_probs=24.2

Q ss_pred             cCCCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          16 PFPKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        16 ~~p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      ..+..++.++++||.+||..||.+|++.
T Consensus       256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s  283 (309)
T 2h34_A          256 TVRPGIPVAFDAVIARGMAKNPEDRYVT  283 (309)
T ss_dssp             GTSTTCCTHHHHHHHHHTCSSGGGSCSS
T ss_pred             ccCCCCCHHHHHHHHHhccCCHHHHHHh
Confidence            3456789999999999999999999943

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=89.72  E-value=0.071  Score=38.50  Aligned_cols=29  Identities=28%  Similarity=0.382  Sum_probs=24.9

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++.++.+||.+||..||.+|+++     .+|..|
T Consensus       297 ~~~~l~~li~~~l~~dP~~Rps~-----~ell~~  325 (337)
T 3mdy_A          297 CLRQMGKLMTECWAHNPASRLTA-----LRVKKT  325 (337)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHHHHHHhhhhChhhCCCH-----HHHHHH
Confidence            45679999999999999999987     777755

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=89.44  E-value=0.046  Score=39.50  Aligned_cols=29  Identities=14%  Similarity=0.130  Sum_probs=25.4

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhccCC
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIKKHK   55 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp   55 (126)
                      +..+.+||.+||..||.+|+++     .+|..|-
T Consensus       278 ~~~l~~li~~cl~~dP~~Rps~-----~ell~~L  306 (326)
T 3uim_A          278 VEQLIQVALLCTQSSPMERPKM-----SEVVRML  306 (326)
T ss_dssp             HHHHHHHHHHHTCSCGGGSCCH-----HHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCccCCCH-----HHHHHHh
Confidence            3789999999999999999988     8888763

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=89.42  E-value=0.16  Score=36.74  Aligned_cols=26  Identities=15%  Similarity=0.202  Sum_probs=22.8

Q ss_pred             CHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183          22 TRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus        22 s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +.++++||.+||..||.+|+++     .+++
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~-----~e~l  310 (336)
T 3g2f_A          285 VRSLKETIEDCWDQDAEARLTA-----QXAE  310 (336)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCH-----HHHH
T ss_pred             HHHHHHHHHHHhcCChhhCcch-----HHHH
Confidence            3579999999999999999987     7774

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=89.36  E-value=0.16  Score=36.45  Aligned_cols=29  Identities=3%  Similarity=0.029  Sum_probs=25.4

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..++.++++||.+||..||.+| ++     .++..
T Consensus       230 ~~~~~~l~~li~~~l~~dP~~R-s~-----~el~~  258 (286)
T 3uqc_A          230 RDIPFQISAVAARSVQGDGGIR-SA-----STLLN  258 (286)
T ss_dssp             TTSCHHHHHHHHHHHCTTSSCC-CH-----HHHHH
T ss_pred             cCCCHHHHHHHHHHcccCCccC-CH-----HHHHH
Confidence            5689999999999999999999 76     67654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=89.09  E-value=0.22  Score=36.46  Aligned_cols=29  Identities=14%  Similarity=0.127  Sum_probs=25.8

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .++.++++||.+||..||.+|++.     .+|..
T Consensus       293 ~~~~~l~~li~~~l~~dp~~Rps~-----~~l~~  321 (345)
T 2v62_A          293 SSCCEIAQFLVCAHSLAYDEKPNY-----QALKK  321 (345)
T ss_dssp             SCCHHHHHHHHHHHTCCTTCCCCH-----HHHHH
T ss_pred             ccHHHHHHHHHHHhhcCcccCCCH-----HHHHH
Confidence            688999999999999999999987     77653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=89.01  E-value=0.067  Score=38.00  Aligned_cols=28  Identities=29%  Similarity=0.387  Sum_probs=23.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .+.++.+||.+||..||.+|+++     .+|..
T Consensus       268 ~~~~l~~li~~cl~~dP~~Rps~-----~~i~~  295 (301)
T 3q4u_A          268 TLTSLAKLMKECWYQNPSARLTA-----LRIKK  295 (301)
T ss_dssp             HHHHHHHHHHHHCCSSGGGSCCH-----HHHHH
T ss_pred             cHHHHHHHHHHHhhcChhhCCCH-----HHHHH
Confidence            44789999999999999999987     66653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=88.97  E-value=0.2  Score=36.72  Aligned_cols=29  Identities=17%  Similarity=0.238  Sum_probs=25.3

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .++.++++||.+||..||.+|+++     .+|..
T Consensus       301 ~~~~~l~~li~~~l~~dp~~Rps~-----~~l~~  329 (352)
T 2jii_A          301 RPSETLQKYLKVVMALTYEEKPPY-----AMLRN  329 (352)
T ss_dssp             CCCHHHHHHHHHHHTCCTTCCCCH-----HHHHH
T ss_pred             CCcHHHHHHHHHHHhCChhhCCCH-----HHHHH
Confidence            468999999999999999999987     66643

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=88.65  E-value=0.056  Score=39.08  Aligned_cols=29  Identities=14%  Similarity=-0.035  Sum_probs=24.8

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      .+..+.+||.+||..||.+|+++     .+|..|
T Consensus       281 ~~~~l~~li~~~l~~dP~~Rps~-----~ell~~  309 (321)
T 2qkw_B          281 SLRKFGDTAVKCLALSSEDRPSM-----GDVLWK  309 (321)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccCcCH-----HHHHHH
Confidence            34678999999999999999987     787755

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=88.02  E-value=0.17  Score=36.16  Aligned_cols=26  Identities=15%  Similarity=0.226  Sum_probs=23.5

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +..++..+.++|.+||..||.+|++.
T Consensus       237 ~~~~~~~l~~li~~~l~~dp~~R~~~  262 (294)
T 4eqm_A          237 RKDIPQSLSNVILRATEKDKANRYKT  262 (294)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCSS
T ss_pred             ccCCCHHHHHHHHHHhcCCHhHcccc
Confidence            45689999999999999999999965

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=87.41  E-value=0.16  Score=36.74  Aligned_cols=26  Identities=12%  Similarity=0.029  Sum_probs=22.3

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      .++++||.+||..||.+|+++     .+|..
T Consensus       286 ~~l~~li~~cl~~dP~~Rps~-----~ell~  311 (322)
T 3soc_A          286 AMLCETIEECWDHDAEARLSA-----GCVGE  311 (322)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence            459999999999999999987     66653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=86.58  E-value=0.19  Score=36.36  Aligned_cols=27  Identities=26%  Similarity=0.322  Sum_probs=23.7

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ...++||.+||..||.+|+++     .+|..|
T Consensus       304 ~~l~~li~~cl~~dp~~Rps~-----~~i~~~  330 (342)
T 1b6c_B          304 RVMAKIMRECWYANGAARLTA-----LRIKKT  330 (342)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHHHHHhccChhhCCCH-----HHHHHH
Confidence            578899999999999999987     787765

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=86.49  E-value=0.17  Score=36.09  Aligned_cols=29  Identities=10%  Similarity=0.084  Sum_probs=24.1

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      .+..+.+||.+||..+|.+|+++     .+|..+
T Consensus       272 ~~~~l~~li~~cl~~~p~~Rps~-----~~l~~~  300 (307)
T 2nru_A          272 SVEAMYSVASQCLHEKKNKRPDI-----KKVQQL  300 (307)
T ss_dssp             HHHHHHHHHHHHTCSSTTTSCCH-----HHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccCcCH-----HHHHHH
Confidence            34678999999999999999987     777643

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=85.53  E-value=0.26  Score=35.88  Aligned_cols=26  Identities=27%  Similarity=0.338  Sum_probs=22.4

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ..+.+|+.+||..||.+|+++     .+|..
T Consensus       265 ~~l~~li~~cl~~dP~~RPt~-----~ei~~  290 (303)
T 3hmm_A          265 RVMAKIMRECWYANGAARLTA-----LRIKK  290 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCH-----HHHHH
Confidence            467899999999999999987     77764

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=85.10  E-value=0.13  Score=38.64  Aligned_cols=28  Identities=4%  Similarity=0.118  Sum_probs=23.6

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ++..+++||.+||..||.+|++.     .++..
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~-----~e~l~  302 (396)
T 4eut_A          275 LQVLLTPVLANILEADQEKCWGF-----DQFFA  302 (396)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCH-----HHHHH
T ss_pred             HHhhchHHHHHhhccChhhhccH-----HHHHH
Confidence            45678999999999999999987     77644

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=80.82  E-value=0.38  Score=38.81  Aligned_cols=33  Identities=9%  Similarity=0.113  Sum_probs=28.6

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+..+.+||.+||..||.+|++.     .+.+.|+|+.
T Consensus       293 ~~~~l~~li~~~l~~dP~~R~~~-----~~~l~~~l~~  325 (681)
T 2pzi_A          293 TYDSYGRLLRRAIDPDPRQRFTT-----AEEMSAQLTG  325 (681)
T ss_dssp             HCHHHHHHHHHHTCSSGGGSCSS-----HHHHHHHHHH
T ss_pred             cCHHHHHHHhhhccCChhhCCCH-----HHHHHHHHHH
Confidence            35789999999999999999988     7888887764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	126
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-25
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-24
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-24
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-23
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-21
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	9e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-13
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-08
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-07
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-07
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-06
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-06
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-04
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.001
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.001
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	0.002
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	0.002

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.1 bits (233), Expect = 9e-25
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           +Q Y  I++    K+ FP H +   + L++ L +    +R G  + G+ DIK HKWF   
Sbjct: 244 IQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTD 101
           DW  +  + +  P IP  KGP DTSNFD Y  E       +
Sbjct: 301 DWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINE 341

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 93.2 bits (231), Expect = 2e-24
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           M+TY  I+N    ++ FP       + L+  L     ++RLG  + G  D+K H WF+  
Sbjct: 207 MKTYEKILN---AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263

Query: 61  DWDGLRNQTLTPPIIP-VIKGPTDTSNFDRYSAENDIKGPTDTSNFD 106
            W+ L ++ +  P  P + +G  DTS FD+Y  E+   G      + 
Sbjct: 264 VWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGEDPYA 310

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.9 bits (230), Expect = 2e-24
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            + + +I+    ++I FP+ ++  A+SL+  L K+ P +RLG       ++ +H++F   
Sbjct: 211 ERLFELILM---EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDETS 120
           +W  +  + L PP  P +    DT  FD    +         +  DRY +   +  D+  
Sbjct: 268 NWQDVVQKKLLPPFKPQVTSEVDTRYFD----DEFTAQSITITPPDRYDSLGLLELDQRE 323

Query: 121 N 121
            
Sbjct: 324 E 324

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 91.3 bits (226), Expect = 1e-23
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 5/123 (4%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
              + +        +  P   +   +SL++ L +     RLG    G  ++K+  +F+  
Sbjct: 212 KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFD-RYSAENDIKG----PTDTSNFDRYSAENDVP 115
           DW  +  Q   PP+IP          FD     E D KG     +D   +  +       
Sbjct: 272 DWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISER 331

Query: 116 PDE 118
             +
Sbjct: 332 WQQ 334

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 2e-21
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 8/107 (7%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            + ++ I     D   +P+ + + A+ L+  L    P +RLG +     DI++H  F+  
Sbjct: 209 EELFHSIRM---DNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG----DIRQHPLFREI 261

Query: 61  DWDGLRNQTLTPPIIPVIKGPTDTSNFDR-YSAENDIKGPTDTSNFD 106
           +W+ L  + + PP  P +K P D SNFD+ +  E       D +  +
Sbjct: 262 NWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALIN 308

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 9e-20
 Identities = 23/82 (28%), Positives = 41/82 (50%)

Query: 2   QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD 61
               +   +   + P+P+ ++  A+ LI+ L  + P +RLG       +IK+H +FQ  +
Sbjct: 240 SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 299

Query: 62  WDGLRNQTLTPPIIPVIKGPTD 83
           WD L  + +  P  PVI+   D
Sbjct: 300 WDDLAAKKVPAPFKPVIRDELD 321

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 1e-13
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGY-QRGGIVDIKKHKWFQG 59
              +  II     +  FP+     A+ L++ L      +RLG  +  G   +K H +F+ 
Sbjct: 216 YLIFQKIIK---LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272

Query: 60  FDWDGLRNQTLTPPIIP 76
             W+ L  Q  TPP + 
Sbjct: 273 VTWENLHQQ--TPPKLT 287

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 3e-08
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 1   MQTYNMIINVGID-KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
            +T   +  V  + +  +  + +  A+  I+ L  + P +R+  Q     D  +H W + 
Sbjct: 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQ-----DSLQHPWIKP 276

Query: 60  FDWDGLRNQTLTPP 73
            D     +   + P
Sbjct: 277 KDTQQALSSAWSHP 290

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 6e-07
 Identities = 9/76 (11%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
           ++   +I   G  ++  P+ ++   +  +         +R   +     ++ +H++ +  
Sbjct: 222 LRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAK-----ELLQHQFLK-- 274

Query: 61  DWDGLRNQTLTPPIIP 76
                   +LTP I  
Sbjct: 275 --IAKPLSSLTPLIAA 288

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.9 bits (103), Expect = 9e-07
 Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 1   MQTYNMIINVGID-KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
            + +  I+    +   P+   ++ +A+  I+ L ++ P +R   +        +H W  G
Sbjct: 215 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE-----QALQHPWIAG 269

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDR 89
              D   ++ +   +   IK     S + +
Sbjct: 270 ---DTALDKNIHQSVSEQIKKNFAKSKWKQ 296

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 14/124 (11%), Positives = 35/124 (28%), Gaps = 9/124 (7%)

Query: 1   MQTYNMIINVGID-KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
            +T   + +   +        ++   +  I+ L    P  R+           +H W   
Sbjct: 231 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIH-----QALEHPWLTP 285

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDET 119
            +  G  +Q  +     +    +  + +D +       G     +  R     +    + 
Sbjct: 286 GNAPGRDSQIPSSRYTKIR--DSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDA 343

Query: 120 SNWD 123
             WD
Sbjct: 344 -FWD 346

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 6e-06
 Identities = 6/59 (10%), Positives = 17/59 (28%), Gaps = 5/59 (8%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           M+    I       +  P   +   +  +K   +++   R          + +H +   
Sbjct: 221 MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS-----QLLQHPFVTV 274

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 8e-06
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
            +TY  I  V   +  FP  VT  A+ LI  L K +P++R   +     ++ +H W   
Sbjct: 210 QETYKRISRV---EFTFPDFVTEGARDLISRLLKHNPSQRPMLR-----EVLEHPWITA 260

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 8/122 (6%)

Query: 1   MQTYNMIINVGID-KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           ++T   +     +        V+  A+  IK L ++ P +RL        D  +H W +G
Sbjct: 234 LETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVH-----DALEHPWLKG 288

Query: 60  FDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAENDIKGPTDTSNFDRYSAENDVPPDET 119
            D   L ++  +      I+        D  + +  I    + S+  ++  +     D  
Sbjct: 289 -DHSNLTSRIPSSR-YNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQEYQIYDSY 346

Query: 120 SN 121
            +
Sbjct: 347 FD 348

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 3e-05
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 5/58 (8%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
                  +  G+    F K      + +I+   +++  ER       I D+  H +FQ
Sbjct: 218 AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY-----SIKDLLNHAFFQ 270

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 4e-05
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 13  DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
            ++ F + V+   Q LI+      P++R  ++     +I+ H W Q 
Sbjct: 219 GQVFFRQRVSSECQHLIRWCLALRPSDRPTFE-----EIQNHPWMQD 260

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 5e-05
 Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 5/58 (8%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ 58
                         +   K +     +L+  +  E+P+ R+        DIKK +W+ 
Sbjct: 212 SCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP-----DIKKDRWYN 264

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 6/61 (9%)

Query: 1   MQTYNMIINVGID-KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
           M    MI++       P     + T + L+       P +R   +     +   H +FQ 
Sbjct: 221 MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE-----EALAHPFFQQ 275

Query: 60  F 60
           +
Sbjct: 276 Y 276

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (87), Expect = 1e-04
 Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 9/79 (11%)

Query: 9   NVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQ 68
           +V  +K  F K   +     +  + +  P +R          +  H W +    D L  +
Sbjct: 288 DVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA-----DAGGLVNHPWLK----DTLGME 338

Query: 69  TLTPPIIPVIKGPTDTSNF 87
            +  P   +    +D   +
Sbjct: 339 EIRVPDRELYGSGSDIPGW 357

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 5e-04
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 12/80 (15%)

Query: 1   MQTYNMIINVGID-KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG 59
            Q    I+N          K ++  A   +  L  +    R+        +  +H W + 
Sbjct: 209 QQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTAS-----EALQHPWLKQ 263

Query: 60  FDWDGLRNQTLTPPIIPVIK 79
                 + + ++  +I  +K
Sbjct: 264 ------KIERVSTKVIRTLK 277

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 5e-04
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 1   MQTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF 60
            +  + I+N    K+P     +   Q  +     ++PAER   +      +  H + +  
Sbjct: 251 FELLDYIVNEPPPKLP-SGVFSLEFQDFVNKCLIKNPAERADLK-----QLMVHAFIKRS 304

Query: 61  DWD 63
           D +
Sbjct: 305 DAE 307

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 34.8 bits (79), Expect = 0.001
 Identities = 8/48 (16%), Positives = 15/48 (31%), Gaps = 5/48 (10%)

Query: 16  PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD 63
                V+  A   +  L +     RL  +     +  +H +F     D
Sbjct: 286 ENQHLVSPEALDFLDKLLRYDHQSRLTAR-----EAMEHPYFYTVVKD 328

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 18/99 (18%)

Query: 1   MQTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKW 56
             +  M   + + +  FP      V+   + LI+ L K  P +R+        +   H W
Sbjct: 220 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT-----EFMNHPW 274

Query: 57  FQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDRYSAEND 95
                      Q+   P  P+        + +R+    +
Sbjct: 275 IM---------QSTKVPQTPLHTSRVLKEDKERWEDVKE 304

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 0.002
 Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 5/47 (10%)

Query: 16  PFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW 62
            F   +    + L+      +PA+R+            H +FQ  + 
Sbjct: 260 KFVTDIDELGKDLLLKCLTFNPAKRISAY-----SALSHPYFQDLER 301

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.0 bits (77), Expect = 0.002
 Identities = 8/80 (10%), Positives = 22/80 (27%), Gaps = 14/80 (17%)

Query: 1   MQTYNMIINVGIDKIPFP-----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHK 55
                    +   K+  P     K       + +         ++  Y    +  + ++ 
Sbjct: 219 ATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY--LRQLFRNL 276

Query: 56  WFQ-------GFDWDGLRNQ 68
           + +        FDW+ L+  
Sbjct: 277 FHRQGFSYDYVFDWNMLKFG 296

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	126
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.8
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.77
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.72
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.69
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.63
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.49
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.37
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.89
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.69
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.55
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.55
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.52
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.43
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.42
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.4
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	98.4
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	98.38
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.32
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.31
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.28
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.27
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.27
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	98.25
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.23
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.2
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.19
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.18
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.15
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.14
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.13
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.09
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.04
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.04
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	97.96
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.89
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	97.88
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	97.46
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	97.28
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.09
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	97.07
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	97.04
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.03
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	97.03
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	96.89
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	96.84
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	96.72
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	96.68
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	96.61
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	96.51
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	96.5
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	96.4
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	96.35
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	96.29
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	96.15
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	96.1
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	95.93
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	95.84
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	95.81
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	94.47
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	93.29
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	82.27

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=6.4e-20  Score=137.06  Aligned_cols=108  Identities=25%  Similarity=0.575  Sum_probs=89.6

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|. .+  .+.+|..+|+++++||++||++||.+|+++...++.+|++||||++++|..+..+++.||++|.+...
T Consensus       212 ~~~~~i~-~~--~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P~~~~~  288 (337)
T d1o6la_         212 RLFELIL-ME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSE  288 (337)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSST
T ss_pred             HHHHHHh-cC--CCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCHHHHHhCCCCCCCCCCCCCh
Confidence            4678888 55  78999999999999999999999999998755678999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCCC---------------CCCCCCCCCccCC
Q psy3183          82 TDTSNFDR-YSAENDIKGP---------------TDTSNFDRYSAEN  112 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~~---------------~~~~~f~~f~~~~  112 (126)
                      .++.+|+. ++.+....++               ..+..|.+|+|..
T Consensus       289 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~v~  335 (337)
T d1o6la_         289 VDTRYFDDEFTAQSITITPPDRYDSLGLLELDQREEQEMFEDFDYIA  335 (337)
T ss_dssp             TCCTTSCHHHHTSCCC--------------------CCTTTTCCEEC
T ss_pred             hhhhhcCchhhhccCCCCCCccccccccccccchhhhhccCCCEeeC
Confidence            99999986 4444333222               2356799999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.2e-19  Score=133.07  Aligned_cols=102  Identities=28%  Similarity=0.594  Sum_probs=65.9

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++++|. .+  .+.+|..+|+++++||.+||++||.+|+++.    .+|+.||||++++|+.+..+++.||++|.+.+.
T Consensus       210 ~~~~~i~-~~--~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~----~~l~~hpff~~~~~~~l~~~~~~pp~~p~~~~~  282 (320)
T d1xjda_         210 ELFHSIR-MD--NPFYPRWLEKEAKDLLVKLFVREPEKRLGVR----GDIRQHPLFREINWEELERKEIDPPFRPKVKSP  282 (320)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTB----SCGGGSGGGTTCCHHHHHTTCSCC---------
T ss_pred             HHHHHHH-cC--CCCCCccCCHHHHHHHHHhcccCCCCCcCHH----HHHHhCchhccCCHHHHHhcCCCCCCCCCCCCc
Confidence            4677888 55  7889999999999999999999999999871    389999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCCCCC--------CCCCCCCCCCcc
Q psy3183          82 TDTSNFDR-YSAENDIKG--------PTDTSNFDRYSA  110 (126)
Q Consensus        82 ~d~~~fd~-~~~e~~~~~--------~~~~~~f~~f~~  110 (126)
                      .|.+|||. +..+.+..+        ..+++.|+||+|
T Consensus       283 ~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~  320 (320)
T d1xjda_         283 FDCSNFDKEFLNEKPRLSFADRALINSMDQNMFRNFSF  320 (320)
T ss_dssp             -----------------------------CCTTTTCCC
T ss_pred             cchhhcChHhhhCCccCCCCcccccCchhhcccCcCcC
Confidence            99999987 555444332        346789999997

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=1.5e-17  Score=124.49  Aligned_cols=94  Identities=38%  Similarity=0.739  Sum_probs=82.3

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGP   81 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~   81 (126)
                      +++.+|. ++  .+.+|..+|+++++||++||.+||.+|+......+.+|++||||++++|..+..+++.|||+|.+...
T Consensus       245 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~~~  321 (350)
T d1rdqe_         245 QIYEKIV-SG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGP  321 (350)
T ss_dssp             HHHHHHH-HC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCST
T ss_pred             HHHHHHh-cC--CCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHHHHHhcCCCcCccCCCCCc
Confidence            4577788 55  78889999999999999999999999986545567999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCC
Q psy3183          82 TDTSNFDRYSAENDIKG   98 (126)
Q Consensus        82 ~d~~~fd~~~~e~~~~~   98 (126)
                      .|.+||+.+..+....+
T Consensus       322 ~d~s~~~~~~~~~~~~s  338 (350)
T d1rdqe_         322 GDTSNFDDYEEEEIRVS  338 (350)
T ss_dssp             TCCTTSCCCCCCCCCCC
T ss_pred             chhhhcCCCCccccccC
Confidence            99999998876555444

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=3.2e-17  Score=121.17  Aligned_cols=94  Identities=32%  Similarity=0.647  Sum_probs=69.3

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCC-C
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIK-G   80 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~-~   80 (126)
                      +++++|+ ++  .+.+|..+|+++++||.+||.+||.+|++....++++|++||||++++|+.+..+++.||++|.+. .
T Consensus       208 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p~~~~~  284 (316)
T d1fota_         208 KTYEKIL-NA--ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQG  284 (316)
T ss_dssp             HHHHHHH-HC--CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC---
T ss_pred             HHHHHHH-cC--CCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCHHHHHhCCCCcCCCCCcCCC
Confidence            4677888 55  788999999999999999999999999976556779999999999999999999999999999864 4


Q ss_pred             CCCCCCCCCCCCCCCCCC
Q psy3183          81 PTDTSNFDRYSAENDIKG   98 (126)
Q Consensus        81 ~~d~~~fd~~~~e~~~~~   98 (126)
                      ..|+++||.+..+....+
T Consensus       285 ~~d~~~f~~~~~~~~~~~  302 (316)
T d1fota_         285 QGDTSQFDKYPEEDINYG  302 (316)
T ss_dssp             -------------CCCTT
T ss_pred             cchhhhcCCCccccccCC
Confidence            568899998777655444

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.63  E-value=2.3e-16  Score=118.55  Aligned_cols=99  Identities=21%  Similarity=0.404  Sum_probs=72.4

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCCCCCCCC--CC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTDTSNFDR--YS   91 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d~~~fd~--~~   91 (126)
                      .+.+|..+|+++++||.+||.+||.+|+++...++++|++||||++++|..+..+++.||++|........+.||.  |.
T Consensus       225 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~d~~~~~  304 (364)
T d1omwa3         225 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFD  304 (364)
T ss_dssp             CCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC--------------
T ss_pred             CCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCHHHHhcCCCCcCcCCCCCCCCcCCccccccCC
Confidence            6677889999999999999999999999986667899999999999999999999999999998776555555542  22


Q ss_pred             CC---CCCCCCCCCCCCCCCccCC
Q psy3183          92 AE---NDIKGPTDTSNFDRYSAEN  112 (126)
Q Consensus        92 ~e---~~~~~~~~~~~f~~f~~~~  112 (126)
                      .+   .......++..|.+|++..
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~  328 (364)
T d1omwa3         305 EEDTKGIKLLDSDQELYRNFPLTI  328 (364)
T ss_dssp             ------CCCCSSSSGGGTTCCEEC
T ss_pred             hhhccCCCCCChHHHHHhcCCccC
Confidence            21   2223345667888887753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.2e-14  Score=104.97  Aligned_cols=70  Identities=33%  Similarity=0.659  Sum_probs=63.2

Q ss_pred             cccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCC
Q psy3183          14 KIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTD   83 (126)
Q Consensus        14 ~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d   83 (126)
                      .+.+|..+|+++++||++||..||.+|+++....++++++||||++++|+.+..++++||++|.+++..|
T Consensus       252 ~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~~~~~~~  321 (322)
T d1vzoa_         252 EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELD  321 (322)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-CC
T ss_pred             CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCCCCCCCCC
Confidence            5677888999999999999999999999875556799999999999999999999999999999987665

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2e-13  Score=99.29  Aligned_cols=70  Identities=29%  Similarity=0.543  Sum_probs=57.9

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCC-CCChhhhccCCCCCCCChhHHhcCCCCCCccc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQ-RGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIP   76 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~-~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P   76 (126)
                      +++++|+ ++  .+.+|..+|+++++||.+||+.||.+|+++. ..+...|++||||++++|+.|..+.  ||-+|
T Consensus       217 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~~--pP~l~  287 (288)
T d1uu3a_         217 LIFQKII-KL--EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT--PPKLT  287 (288)
T ss_dssp             HHHHHHH-TT--CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSC--CCCCC
T ss_pred             HHHHHHH-cC--CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcCC--CCCCC
Confidence            4678898 55  7899999999999999999999999999882 1123347999999999999998775  66555

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.2e-10  Score=81.78  Aligned_cols=64  Identities=19%  Similarity=0.317  Sum_probs=43.0

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPP   73 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~pp   73 (126)
                      +++.+|. ++  .+.++    ..+|.++++||++||..||.+|+++     .+|+.||||+..+|.........+|
T Consensus       223 ~~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~-----~eil~hp~~~~~~~~~~l~~~~~~P  290 (293)
T d1jksa_         223 ETLANVS-AV--NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI-----QDSLQHPWIKPKDTQQALSSAWSHP  290 (293)
T ss_dssp             HHHHHHH-TT--CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHHSTTTCC-------------C
T ss_pred             HHHHHHH-hc--CCCCCchhcCCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCcccCCCChhHhhccCCCCc
Confidence            4566777 44  45544    6799999999999999999999988     9999999999999988776665544

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.69  E-value=2.3e-09  Score=78.08  Aligned_cols=39  Identities=21%  Similarity=0.235  Sum_probs=37.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      .+|++++|||++||+.||.+|+++     .++++||||++|.|+
T Consensus       290 ~~s~~~~dli~~mL~~dP~~R~ta-----~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         290 LVSPEALDFLDKLLRYDHQSRLTA-----REAMEHPYFYTVVKD  328 (328)
T ss_dssp             GCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTSCCC
T ss_pred             cCCHHHHHHHHHHccCChhHCcCH-----HHHhcCcccCCCCCC
Confidence            478999999999999999999998     999999999999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.4e-08  Score=72.25  Aligned_cols=49  Identities=33%  Similarity=0.560  Sum_probs=44.4

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      +++++|. ++  .+.+|..+|+++++||.+||..||.+|+++     .+|++||||.
T Consensus       211 ~~~~~i~-~~--~~~~p~~~s~~~~~li~~~L~~dp~~R~t~-----~eil~hp~~~  259 (263)
T d2j4za1         211 ETYKRIS-RV--EFTFPDFVTEGARDLISRLLKHNPSQRPML-----REVLEHPWIT  259 (263)
T ss_dssp             HHHHHHH-TT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHTCHHHH
T ss_pred             HHHHHHH-cC--CCCCCccCCHHHHHHHHHHccCCHhHCcCH-----HHHHcCcCcC
Confidence            4677888 55  788999999999999999999999999988     9999999996

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.9e-08  Score=71.61  Aligned_cols=49  Identities=29%  Similarity=0.492  Sum_probs=42.8

Q ss_pred             HHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183           6 MIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus         6 ~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      .|+ ++  .+.++..+|+++++||++||..||.+|+++     .+|++||||+++-.
T Consensus       215 ~i~-~~--~~~~~~~~s~~~~~li~~~L~~dp~~R~s~-----~eil~hp~~~~~~~  263 (273)
T d1xwsa_         215 EII-RG--QVFFRQRVSSECQHLIRWCLALRPSDRPTF-----EEIQNHPWMQDVLL  263 (273)
T ss_dssp             HHH-HC--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGSSCCC
T ss_pred             HHh-hc--ccCCCCCCCHHHHHHHHHHccCCHhHCcCH-----HHHhcCHhhCCCCC
Confidence            455 44  677888999999999999999999999988     99999999997643

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2e-08  Score=72.04  Aligned_cols=41  Identities=20%  Similarity=0.365  Sum_probs=37.3

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      ++..+|+++++||.+||+.||.+|+++     .++++||||+++++
T Consensus       261 ~~~~~s~~~~dli~~mL~~dP~~R~sa-----~e~L~Hpff~~i~~  301 (305)
T d1blxa_         261 FVTDIDELGKDLLLKCLTFNPAKRISA-----YSALSHPYFQDLER  301 (305)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGTTCCC
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcCH-----HHHhcChhhcCchh
Confidence            445789999999999999999999988     99999999998864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=5.4e-08  Score=69.36  Aligned_cols=50  Identities=22%  Similarity=0.441  Sum_probs=40.9

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ++++|. .+.....++..+++++++||.+||..||.+|+++     .+|++||||+
T Consensus       221 ~~~~i~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~-----~ell~Hp~fk  270 (270)
T d1t4ha_         221 IYRRVT-SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSI-----KDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHT-TTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGC
T ss_pred             HHHHHH-cCCCCcccCccCCHHHHHHHHHHccCCHhHCcCH-----HHHhCCcccC
Confidence            456666 4423345667789999999999999999999987     9999999996

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=2.3e-08  Score=73.07  Aligned_cols=58  Identities=14%  Similarity=0.262  Sum_probs=44.8

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhHHhcCCCCCCcccCCCCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDGLRNQTLTPPIIPVIKGPTD   83 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~l~~~~~~ppf~P~~~~~~d   83 (126)
                      ++...++++++||.+||+.||.+|+++     .++++||||+++..    ...+..|..+...+..|
T Consensus       296 ~~~~~~~~~~dll~~mL~~dP~~Rpta-----~e~L~Hp~f~~~~~----~~~~~~p~~~~~~~~~~  353 (362)
T d1q8ya_         296 FSKDEAKEISDFLSPMLQLDPRKRADA-----GGLVNHPWLKDTLG----MEEIRVPDRELYGSGSD  353 (362)
T ss_dssp             CCHHHHHHHHHHHGGGGCSSTTTCBCH-----HHHHTCGGGTTCTT----CTTCCCTTSCTTCBSTT
T ss_pred             cCcccCHHHHHHHHHHCCCChhHCcCH-----HHHhcCcccCCCCC----cccCCCCCcccCCCCCC
Confidence            344567899999999999999999998     99999999996653    34555666666554444

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.40  E-value=8.3e-08  Score=68.61  Aligned_cols=49  Identities=22%  Similarity=0.381  Sum_probs=40.8

Q ss_pred             HHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           3 TYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      ++++|+ ++  .+.++    ..+|+++++||++||+.||.+|+++     .+|++||||+.
T Consensus       223 ~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~-----~eil~h~~~~~  275 (277)
T d1phka_         223 MLRMIM-SG--NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA-----EEALAHPFFQQ  275 (277)
T ss_dssp             HHHHHH-HT--CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCH-----HHHTTSGGGCT
T ss_pred             HHHHHH-hC--CCCCCCcccccCCHHHHHHHHHHccCChhHCcCH-----HHHHcCHHHHH
Confidence            456777 44  44444    3689999999999999999999988     99999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=98.40  E-value=7.9e-08  Score=70.93  Aligned_cols=55  Identities=15%  Similarity=0.267  Sum_probs=45.3

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChhH
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWDG   64 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~~   64 (126)
                      +++++|. .+  .+.++    ..+|+++++||.+||+.||.+|+++     .+|+.||||+..+|..
T Consensus       232 ~~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~-----~eil~hp~~~~~~~~~  290 (350)
T d1koaa2         232 ETLRNVK-SC--DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI-----HQALEHPWLTPGNAPG  290 (350)
T ss_dssp             HHHHHHH-HT--CCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCH-----HHHHHSTTTSCTTCCS
T ss_pred             HHHHHHH-hC--CCCCCcccccCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCcccCCCCCCC
Confidence            4567777 44  45544    4689999999999999999999988     9999999999887753

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.38  E-value=1.2e-07  Score=68.66  Aligned_cols=50  Identities=20%  Similarity=0.538  Sum_probs=41.7

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++.+|+ ++  .+.++    ..+|+++++||.+||.+||.+|+++     .+|+.||||++
T Consensus       216 ~~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~-----~eil~hp~~~~  269 (307)
T d1a06a_         216 KLFEQIL-KA--EYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC-----EQALQHPWIAG  269 (307)
T ss_dssp             HHHHHHH-TT--CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHHSTTTTS
T ss_pred             HHHHHHh-cc--CCCCCCccccCCCHHHHHHHHHHccCCHhHCcCH-----HHHhcCHhhCC
Confidence            3567777 54  44443    5789999999999999999999988     99999999985

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.32  E-value=1.5e-07  Score=69.47  Aligned_cols=51  Identities=27%  Similarity=0.443  Sum_probs=42.4

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      +++.+|. ++  .+.+|    ..+|+++++||.+||+.||.+|+++     .+++.||||++.
T Consensus       235 ~~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~-----~eil~Hp~~~~~  289 (352)
T d1koba_         235 ETLQNVK-RC--DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTV-----HDALEHPWLKGD  289 (352)
T ss_dssp             HHHHHHH-HC--CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHTSTTTSSC
T ss_pred             HHHHHHH-hC--CCCCCcccccCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCHhhCCC
Confidence            3566777 44  45555    4689999999999999999999998     999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.3e-07  Score=67.05  Aligned_cols=37  Identities=22%  Similarity=0.432  Sum_probs=34.1

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +..+|+.+++||++||+.||.+|+++     .+|++||||++
T Consensus       252 ~~~~s~~~~dll~~mL~~dP~~R~sa-----~e~L~Hp~f~~  288 (292)
T d1unla_         252 VPKLNATGRDLLQNLLKCNPVQRISA-----EEALQHPYFSD  288 (292)
T ss_dssp             STTCCHHHHHHHHHHSCSSGGGSCCH-----HHHTTSGGGSS
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCH-----HHHhcChhhcC
Confidence            35689999999999999999999998     99999999985

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.28  E-value=1.6e-07  Score=66.83  Aligned_cols=37  Identities=22%  Similarity=0.424  Sum_probs=34.0

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ++..+|++++|||++||+.||++|+++     .|+++||||+
T Consensus       249 ~~~~~s~~~~dli~~~L~~dP~~R~s~-----~ell~Hp~f~  285 (286)
T d1ob3a_         249 FLKGLDESGIDLLSKMLKLDPNQRITA-----KQALEHAYFK  285 (286)
T ss_dssp             TCCSCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGG
T ss_pred             hcccCCHHHHHHHHHHccCChhHCcCH-----HHHhcCcccC
Confidence            345689999999999999999999988     9999999997

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.7e-07  Score=67.20  Aligned_cols=36  Identities=19%  Similarity=0.367  Sum_probs=33.7

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      .+|.++++||++||+.||.+|+++     .+|++||||+++
T Consensus       254 ~~s~~~~dll~~mL~~dP~~R~t~-----~ell~H~ff~~~  289 (298)
T d1gz8a_         254 PLDEDGRSLLSQMLHYDPNKRISA-----KAALAHPFFQDV  289 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGTTC
T ss_pred             CCCHHHHHHHHHHccCChhHCcCH-----HHHhCCHhhccC
Confidence            578999999999999999999988     999999999866

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.2e-07  Score=66.97  Aligned_cols=40  Identities=8%  Similarity=0.193  Sum_probs=36.3

Q ss_pred             ccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          15 IPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        15 ~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +..|..+|.++++||.+||..||.+|+++     .+|+.||||+.
T Consensus       236 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~-----~eil~Hp~~~~  275 (293)
T d1yhwa1         236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSA-----KELLQHQFLKI  275 (293)
T ss_dssp             CSSGGGSCHHHHHHHHHHTCSSTTTSCCH-----HHHTTCGGGGG
T ss_pred             CCCcccCCHHHHHHHHHHccCChhHCcCH-----HHHhcCHhhCC
Confidence            45567899999999999999999999988     99999999973

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.9e-07  Score=66.07  Aligned_cols=52  Identities=10%  Similarity=0.118  Sum_probs=41.2

Q ss_pred             hHHHHHHhcCC-CcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGI-DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~-~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++.+|+ ++. ..+..|..+|+++++||.+||+.||.+|+++     .+|++||||..
T Consensus       222 ~~~~~i~-~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~ell~hp~~~~  274 (288)
T d2jfla1         222 RVLLKIA-KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT-----SQLLQHPFVTV  274 (288)
T ss_dssp             GHHHHHH-HSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCH-----HHHTTSGGGCC
T ss_pred             HHHHHHH-cCCCCCCCccccCCHHHHHHHHHHccCChhHCcCH-----HHHhcCcccCC
Confidence            3556676 331 1234456899999999999999999999988     99999999973

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2.3e-07  Score=67.64  Aligned_cols=40  Identities=13%  Similarity=0.206  Sum_probs=35.6

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      ..+|+++++||.+||+.||.+|+++     .+|++||||+++.+.
T Consensus       271 ~~~s~~~~dli~~mL~~dP~~R~ta-----~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         271 TNASPLAVNLLEKMLVLDAEQRVTA-----GEALAHPYFESLHDT  310 (346)
T ss_dssp             TTCCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGTTTC--
T ss_pred             cCCCHHHHHHHHHHCcCChhHCcCH-----HHHhcChhhCcCCCc
Confidence            5689999999999999999999998     999999999987653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.7e-07  Score=68.25  Aligned_cols=50  Identities=18%  Similarity=0.349  Sum_probs=42.6

Q ss_pred             hHHHHHHhcCCCcccCC----CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFP----KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p----~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +++.+|+ ++  .+.+|    ..+|+++++||.+||..||.+|+++     .+++.||||+.
T Consensus       210 ~~~~~i~-~~--~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~-----~eil~hp~~~~  263 (321)
T d1tkia_         210 QIIENIM-NA--EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA-----SEALQHPWLKQ  263 (321)
T ss_dssp             HHHHHHH-HT--CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCH-----HHHHHSHHHHS
T ss_pred             HHHHHHH-hC--CCCCChhhccCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCHhhcc
Confidence            4677888 55  66666    4799999999999999999999988     99999999963

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=6.5e-07  Score=63.68  Aligned_cols=35  Identities=29%  Similarity=0.657  Sum_probs=33.1

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      ..+|+++++||.+||..||.+|+++     .+|++||||+
T Consensus       230 ~~~s~~~~~li~~~L~~dP~~R~t~-----~eil~hpwf~  264 (271)
T d1nvra_         230 KKIDSAPLALLHKILVENPSARITI-----PDIKKDRWYN  264 (271)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCH-----HHHTTCTTTT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCH-----HHHhcCHhhC
Confidence            4689999999999999999999988     9999999996

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=6.5e-07  Score=63.51  Aligned_cols=49  Identities=12%  Similarity=0.097  Sum_probs=41.1

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWF   57 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f   57 (126)
                      +++.+|. .+ ....+|..+|+++++||.+||+.||.+|+++     .+|++|||.
T Consensus       221 ~~~~~i~-~~-~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~-----~ell~hp~i  269 (269)
T d2java1         221 ELAGKIR-EG-KFRRIPYRYSDELNEIITRMLNLKDYHRPSV-----EEILENPLI  269 (269)
T ss_dssp             HHHHHHH-HT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSTTC
T ss_pred             HHHHHHH-cC-CCCCCCcccCHHHHHHHHHHcCCChhHCcCH-----HHHHhCCcC
Confidence            4567777 44 2345778899999999999999999999988     999999995

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=3.8e-07  Score=65.19  Aligned_cols=37  Identities=22%  Similarity=0.244  Sum_probs=34.0

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCC
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFD   61 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~   61 (126)
                      .+|+++++||++||+.||.+|+++     .++++||||++..
T Consensus       251 ~~s~~~~dll~~~L~~dP~~R~sa-----~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         251 AAGDDLLDLIQGLFLFNPCARITA-----TQALKMKYFSNRP  287 (299)
T ss_dssp             TCCHHHHHHHHHHHCSSTTTSCCH-----HHHHTSGGGTSSS
T ss_pred             cCCHHHHHHHHHHccCChhhCcCH-----HHHhCCHhhCCCC
Confidence            578999999999999999999998     9999999998643

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=1.4e-07  Score=68.51  Aligned_cols=39  Identities=18%  Similarity=0.245  Sum_probs=35.6

Q ss_pred             CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCChh
Q psy3183          20 HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDWD   63 (126)
Q Consensus        20 ~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w~   63 (126)
                      .+|.++++||.+||+.||.+|+++     .++++||||+..+|.
T Consensus       269 ~~s~~~~dli~~~L~~dP~~R~ta-----~e~L~Hpf~~~~~~~  307 (322)
T d1s9ja_         269 VFSLEFQDFVNKCLIKNPAERADL-----KQLMVHAFIKRSDAE  307 (322)
T ss_dssp             TBCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSHHHHHHHHS
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCH-----HHHhhCHhhCcCCcc
Confidence            478999999999999999999998     999999999876664

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=4.8e-07  Score=65.76  Aligned_cols=37  Identities=14%  Similarity=0.227  Sum_probs=33.9

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..+|+++++||++||+.||.+|+++     .++++||||+.+
T Consensus       271 ~~~s~~~~dli~~mL~~dP~~R~ta-----~elL~Hp~f~~~  307 (348)
T d2gfsa1         271 IGANPLAVDLLEKMLVLDSDKRITA-----AQALAHAYFAQY  307 (348)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTT
T ss_pred             CCCCHHHHHHHHHHCcCChhhCcCH-----HHHhcCHhhCCC
Confidence            3589999999999999999999998     999999999854

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=6.9e-07  Score=65.46  Aligned_cols=37  Identities=19%  Similarity=0.262  Sum_probs=33.3

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCCCh
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGFDW   62 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v~w   62 (126)
                      +|+++++||++||..||++|+++     +++++||||+..-+
T Consensus       283 ~s~~~~dll~~mL~~dP~~R~ta-----~elL~Hpw~~~~~~  319 (355)
T d2b1pa1         283 KASQARDLLSKMLVIDPAKRISV-----DDALQHPYINVWYD  319 (355)
T ss_dssp             HHHHHHHHHHHHSCSSTTTSCCH-----HHHHTSTTTGGGCC
T ss_pred             CCHHHHHHHHHHCcCChhHCcCH-----HHHhcCcccCCCCC
Confidence            57889999999999999999998     99999999986433

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=6.4e-07  Score=65.53  Aligned_cols=37  Identities=22%  Similarity=0.340  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQGF   60 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~v   60 (126)
                      ..+++++++||.+||+.||.+|+++     .+++.||||+.+
T Consensus       273 ~~~s~~~~dLl~~mL~~dP~~R~ta-----~e~L~Hp~f~~~  309 (350)
T d1q5ka_         273 PRTPPEAIALCSRLLEYTPTARLTP-----LEACAHSFFDEL  309 (350)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGGGG
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCHhhccc
Confidence            3579999999999999999999998     999999999754

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=7e-07  Score=64.17  Aligned_cols=34  Identities=29%  Similarity=0.345  Sum_probs=31.6

Q ss_pred             CCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          21 VTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        21 ~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      .+++++|||.+||+.||.+|+++     .+++.||||+.
T Consensus       277 ~~~~~~dLl~~mL~~dP~~R~sa-----~elL~Hpff~~  310 (318)
T d3blha1         277 RDPYALDLIDKLLVLDPAQRIDS-----DDALNHDFFWS  310 (318)
T ss_dssp             CCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGSS
T ss_pred             CCHHHHHHHHHHCcCChhHCcCH-----HHHHcChhhcc
Confidence            47899999999999999999998     99999999974

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.96  E-value=1.8e-06  Score=62.44  Aligned_cols=37  Identities=14%  Similarity=0.234  Sum_probs=33.8

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +..+|+++++||.+||..||.+|+++     .+++.||||..
T Consensus       236 ~~~~s~~~~~li~~~L~~dP~~Rpt~-----~ell~Hp~~~~  272 (309)
T d1u5ra_         236 SGHWSEYFRNFVDSCLQKIPQDRPTS-----EVLLKHRFVLR  272 (309)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHTTCHHHHS
T ss_pred             CCCCCHHHHHHHHHHCcCChhHCcCH-----HHHHhCHHhcC
Confidence            45689999999999999999999988     99999999963

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=6.1e-07  Score=65.58  Aligned_cols=40  Identities=28%  Similarity=0.634  Sum_probs=35.2

Q ss_pred             cccCCC----CCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC
Q psy3183          14 KIPFPK----HVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ   58 (126)
Q Consensus        14 ~~~~p~----~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~   58 (126)
                      .+.+|.    .+|+++++||++||+.||.+|+++     .+|+.||||.
T Consensus       233 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~-----~eil~hp~~~  276 (335)
T d2ozaa1         233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI-----TEFMNHPWIM  276 (335)
T ss_dssp             SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSHHHH
T ss_pred             CCCCCCcccccCCHHHHHHHHHHccCChhHCcCH-----HHHHcCHHhh
Confidence            455553    589999999999999999999988     9999999995

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=2.6e-06  Score=62.03  Aligned_cols=36  Identities=14%  Similarity=0.267  Sum_probs=33.4

Q ss_pred             CCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCCC
Q psy3183          19 KHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQG   59 (126)
Q Consensus        19 ~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~~   59 (126)
                      +.+|+++++||.+||+.||.+|+++     .++++||||+.
T Consensus       265 ~~~s~~~~~li~~~L~~dP~~R~ta-----~e~L~hpf~~~  300 (345)
T d1pmea_         265 PNADSKALDLLDKMLTFNPHKRIEV-----EQALAHPYLEQ  300 (345)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGTT
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCHhhcc
Confidence            4688999999999999999999988     99999999973

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=5.8e-05  Score=53.58  Aligned_cols=51  Identities=16%  Similarity=0.402  Sum_probs=41.4

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc--CCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK--HKWFQG   59 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~--hp~f~~   59 (126)
                      +++..|. ++ ..+..|..++.++++||.+||..||.+|+++     .+|..  |+||..
T Consensus       222 ~~~~~i~-~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~~i~~~L~~~~~~  274 (285)
T d1fmka3         222 EVLDQVE-RG-YRMPCPPECPESLHDLMCQCWRKEPEERPTF-----EYLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHHHH-TT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHHHHTTTSC
T ss_pred             HHHHHHH-hc-CCCCCCcccCHHHHHHHHHHcccCHhHCcCH-----HHHHHHHhhhhcC
Confidence            3456666 43 3567788999999999999999999999988     89877  788864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=7e-05  Score=52.43  Aligned_cols=46  Identities=22%  Similarity=0.417  Sum_probs=38.9

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +++.+|. ++ ..+.+|..+++++++||.+||..||.+|+++     .+|..|
T Consensus       217 ~~~~~i~-~~-~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~-----~ei~~~  262 (273)
T d1mp8a_         217 DVIGRIE-NG-ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF-----TELKAQ  262 (273)
T ss_dssp             GHHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHH-cC-CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCH-----HHHHHH
Confidence            4677787 54 3567889999999999999999999999987     888765

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=4.1e-05  Score=54.04  Aligned_cols=50  Identities=14%  Similarity=0.337  Sum_probs=39.1

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhh---ccCCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI---KKHKWFQ   58 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i---~~hp~f~   58 (126)
                      ++...|. ++ ..+.+|..++.++++||.+||..||.+|+++     .+|   ++|+|+.
T Consensus       218 ~~~~~i~-~~-~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~-----~~i~~~L~~~~~~  270 (277)
T d1xbba_         218 EVTAMLE-KG-ERMGCPAGCPREMYDLMNLCWTYDVENRPGF-----AAVELRLRNYYYD  270 (277)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHHHHHHHHHHH
T ss_pred             HHHHHHH-cC-CCCCCCcccCHHHHHHHHHHcCCCHhHCcCH-----HHHHHHhhCHHhh
Confidence            3456666 44 4677888999999999999999999999987     676   3565553

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00016  Score=50.37  Aligned_cols=46  Identities=15%  Similarity=0.190  Sum_probs=38.5

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++.++|. ++ ..+..|...++++++||++||+.||.+|++.     .+|++|
T Consensus       209 ~~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~~  254 (258)
T d1k2pa_         209 ETAEHIA-QG-LRLYRPHLASEKVYTIMYSCWHEKADERPTF-----KILLSN  254 (258)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHH-hC-CCCCCcccccHHHHHHHHHHccCCHhHCcCH-----HHHHHH
Confidence            4567777 54 3567788899999999999999999999987     888876

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00018  Score=51.70  Aligned_cols=45  Identities=13%  Similarity=0.199  Sum_probs=35.8

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      +.+++..+ ..+..|..+|+++++||.+||..||.+|+++     .+|.+|
T Consensus       276 ~~~~~~~~-~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~-----~ei~~~  320 (325)
T d1rjba_         276 FYKLIQNG-FKMDQPFYATEEIYIIMQSCWAFDSRKRPSF-----PNLTSF  320 (325)
T ss_dssp             HHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHhcC-CCCCCCCcCCHHHHHHHHHHcCCChhHCcCH-----HHHHHH
Confidence            44455132 3566788999999999999999999999988     888765

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00013  Score=51.96  Aligned_cols=46  Identities=20%  Similarity=0.348  Sum_probs=38.7

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++++.|. ++ ..+.+|..+++++++||.+||..||.+|+++     .+|..|
T Consensus       234 ~~~~~i~-~~-~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~-----~eil~~  279 (309)
T d1fvra_         234 ELYEKLP-QG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSF-----AQILVS  279 (309)
T ss_dssp             HHHHHGG-GT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHH-hc-CCCCCCccCCHHHHHHHHHHcCCChhHCcCH-----HHHHHH
Confidence            4566676 43 3677888999999999999999999999988     899877

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00011  Score=51.44  Aligned_cols=50  Identities=16%  Similarity=0.327  Sum_probs=40.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc--CCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK--HKWFQ   58 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~--hp~f~   58 (126)
                      ++++.|. ++ ..+..|..++.++++||.+||..||.+|+++     .+|..  |+||.
T Consensus       218 ~~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~-----~ei~~~L~~~ft  269 (272)
T d1qpca_         218 EVIQNLE-RG-YRMVRPDNCPEELYQLMRLCWKERPEDRPTF-----DYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHHHHHHHH
T ss_pred             HHHHHHH-hc-CCCCCcccChHHHHHHHHHHcCCCHhHCcCH-----HHHHHHhhhhhh
Confidence            3556666 44 3567788999999999999999999999987     88876  66663

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.0002  Score=50.98  Aligned_cols=45  Identities=16%  Similarity=0.312  Sum_probs=37.1

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ++++.|. ++ ..+..|..++..+++||.+||..+|.+|+++     .+|..
T Consensus       243 ~~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-----~~il~  287 (308)
T d1p4oa_         243 QVLRFVM-EG-GLLDKPDNCPDMLFELMRMCWQYNPKMRPSF-----LEIIS  287 (308)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHHH-hC-CCCCCcccchHHHHHHHHHHcCCChhHCcCH-----HHHHH
Confidence            4567777 44 3566788999999999999999999999987     77764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00029  Score=49.23  Aligned_cols=45  Identities=13%  Similarity=0.213  Sum_probs=37.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +++.+|. ++ ..+.+|..+++++++||.+||..||.+|+++     .+|.+
T Consensus       208 ~~~~~i~-~~-~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~-----~~l~~  252 (262)
T d1byga_         208 DVVPRVE-KG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF-----LQLRE  252 (262)
T ss_dssp             GHHHHHT-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHHH-cC-CCCCCCccCCHHHHHHHHHHcccCHhHCcCH-----HHHHH
Confidence            4566776 43 4678889999999999999999999999987     67654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00042  Score=48.81  Aligned_cols=37  Identities=14%  Similarity=0.275  Sum_probs=33.0

Q ss_pred             CcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          13 DKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        13 ~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ..+..|..+++++++||.+||..||.+|+++     .+|.+|
T Consensus       254 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~eil~~  290 (299)
T d1ywna1         254 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-----SELVEH  290 (299)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCChhHCcCH-----HHHHHH
Confidence            3567788899999999999999999999987     888876

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00069  Score=47.85  Aligned_cols=45  Identities=11%  Similarity=0.346  Sum_probs=36.8

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ++++.|. .+ ..+.+|..+++++++||.+||..||.+|+++     .+|..
T Consensus       245 ~~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~-----~eil~  289 (299)
T d1fgka_         245 ELFKLLK-EG-HRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-----KQLVE  289 (299)
T ss_dssp             HHHHHHH-TT-CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHHH-cC-CCCCCCccchHHHHHHHHHHccCCHhHCcCH-----HHHHH
Confidence            3566666 43 4677889999999999999999999999987     77753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00056  Score=47.48  Aligned_cols=46  Identities=15%  Similarity=0.298  Sum_probs=37.3

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++++.|. .+ .....|...++++.+||.+||..||.+|+++     .+|..|
T Consensus       210 ~~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~-----~~il~~  255 (263)
T d1sm2a_         210 EVVEDIS-TG-FRLYKPRLASTHVYQIMNHCWKERPEDRPAF-----SRLLRQ  255 (263)
T ss_dssp             HHHHHHH-HT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHH-hc-CCCCCccccCHHHHHHHHHHccCCHhHCcCH-----HHHHHH
Confidence            3566676 43 3566788899999999999999999999987     888765

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.001  Score=46.89  Aligned_cols=49  Identities=10%  Similarity=0.236  Sum_probs=38.8

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhh---ccCCCC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDI---KKHKWF   57 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i---~~hp~f   57 (126)
                      +++..|. ++ ..+.+|..+++++.+||.+||..||.+|++.     .+|   ++|+|+
T Consensus       220 ~~~~~i~-~~-~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~-----~~i~~~L~~~~~  271 (285)
T d1u59a_         220 EVMAFIE-QG-KRMECPPECPPELYALMSDCWIYKWEDRPDF-----LTVEQRMRACYY  271 (285)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHHHHHHHHHH
T ss_pred             HHHHHHH-cC-CCCCCCCcCCHHHHHHHHHHcCCCHhHCcCH-----HHHHHHHHHHHH
Confidence            3566777 54 3577889999999999999999999999987     555   456554

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00059  Score=48.59  Aligned_cols=46  Identities=11%  Similarity=0.191  Sum_probs=38.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ++...|. ++ ..+..|..++.++++||.+||..||.+|+++     .+|..|
T Consensus       221 ~~~~~i~-~~-~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~-----~eil~~  266 (317)
T d1xkka_         221 EISSILE-KG-ERLPQPPICTIDVYMIMVKCWMIDADSRPKF-----RELIIE  266 (317)
T ss_dssp             GHHHHHH-HT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHH-cC-CCCCCCcccCHHHHHHHHHhCCCChhhCcCH-----HHHHHH
Confidence            3455565 44 3567888999999999999999999999988     898887

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0011  Score=46.24  Aligned_cols=45  Identities=16%  Similarity=0.314  Sum_probs=34.7

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      +++.+|. +....+..|..++.++++||.+||..||.+|+++     .+|.
T Consensus       222 ~~~~~i~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~-----~ei~  266 (273)
T d1u46a_         222 QILHKID-KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF-----VALR  266 (273)
T ss_dssp             HHHHHHH-TSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             HHHHHHH-hCCCCCCCcccccHHHHHHHHHHcCCChhHCcCH-----HHHH
Confidence            3556676 3322445667899999999999999999999987     7764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.35  E-value=0.0015  Score=45.86  Aligned_cols=44  Identities=16%  Similarity=0.385  Sum_probs=34.9

Q ss_pred             HHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           3 TYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         3 l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +++.|. .+ ..+.+|..++.++++||.+||..||.+|+++     .+|..
T Consensus       225 ~~~~i~-~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~ei~~  268 (287)
T d1opja_         225 VYELLE-KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSF-----AEIHQ  268 (287)
T ss_dssp             HHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHh-cC-CCCCCCccchHHHHHHHHHHcCCCHhHCcCH-----HHHHH
Confidence            344454 33 3567788999999999999999999999987     77754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0009  Score=47.65  Aligned_cols=44  Identities=7%  Similarity=0.151  Sum_probs=36.5

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      ...|. .+ ..+..|..+++++++||.+||..||.+|+++     .+|.+|
T Consensus       244 ~~~i~-~g-~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~-----~ei~~~  287 (311)
T d1r0pa_         244 TVYLL-QG-RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSF-----SELVSR  287 (311)
T ss_dssp             HHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHH-cC-CCCCCcccCcHHHHHHHHHHcCCCHhHCcCH-----HHHHHH
Confidence            44555 44 3566788899999999999999999999988     888876

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.15  E-value=0.0022  Score=45.10  Aligned_cols=44  Identities=16%  Similarity=0.323  Sum_probs=35.6

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIK   52 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~   52 (126)
                      ++...|. ++ ..+..|..+++++.+||.+||..+|.+|+++     .+|.
T Consensus       250 e~~~~v~-~~-~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~-----~ev~  293 (301)
T d1lufa_         250 EVIYYVR-DG-NILACPENCPLELYNLMRLCWSKLPADRPSF-----CSIH  293 (301)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             HHHHHHH-cC-CCCCCCccchHHHHHHHHHHcCCChhHCcCH-----HHHH
Confidence            4566777 54 3456788999999999999999999999987     7764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.10  E-value=0.002  Score=45.44  Aligned_cols=45  Identities=16%  Similarity=0.210  Sum_probs=35.6

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ++...|. ++ ..+..|..++.++++||.+||..||.+|+++     .+|..
T Consensus       241 ~~~~~i~-~~-~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~-----~ei~~  285 (299)
T d1jpaa_         241 DVINAIE-QD-YRLPPPMDCPSALHQLMLDCWQKDRNHRPKF-----GQIVN  285 (299)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHHH
T ss_pred             HHHHHHH-cC-CCCCCCccchHHHHHHHHHHcCCCHhHCcCH-----HHHHH
Confidence            3556666 43 3566778899999999999999999999987     67654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0022  Score=45.38  Aligned_cols=44  Identities=18%  Similarity=0.357  Sum_probs=33.8

Q ss_pred             HHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           4 YNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         4 ~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      +.++++.+ ..+..|..++.++++||.+||..||.+|+++     .+|..
T Consensus       257 ~~~~i~~~-~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~-----~~il~  300 (311)
T d1t46a_         257 FYKMIKEG-FRMLSPEHAPAEMYDIMKTCWDADPLKRPTF-----KQIVQ  300 (311)
T ss_dssp             HHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHhcC-CCCCCcccccHHHHHHHHHHcCCChhHCcCH-----HHHHH
Confidence            34444233 3566778899999999999999999999987     77653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0037  Score=43.59  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=36.0

Q ss_pred             hHHHHHHhcCCCcccCCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183           2 QTYNMIINVGIDKIPFPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus         2 ~l~~~I~~~~~~~~~~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ++++.|. .+ ..+..|..++.++++||.+||..||.+|+++     .+|..
T Consensus       221 ~~~~~i~-~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~-----~eil~  265 (283)
T d1mqba_         221 EVMKAIN-DG-FRLPTPMDCPSAIYQLMMQCWQQERARRPKF-----ADIVS  265 (283)
T ss_dssp             HHHHHHH-TT-CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCH-----HHHHH
T ss_pred             HHHHHHh-cc-CCCCCchhhHHHHHHHHHHHCcCCHhHCcCH-----HHHHH
Confidence            3556666 43 3567788899999999999999999999987     77754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.81  E-value=0.0013  Score=45.63  Aligned_cols=26  Identities=8%  Similarity=0.180  Sum_probs=23.5

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCC
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGY   43 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~   43 (126)
                      +..+|+++++||.+||..||.+|++.
T Consensus       238 ~~~~s~~l~~li~~~L~~dp~~R~~s  263 (277)
T d1o6ya_         238 HEGLSADLDAVVLKALAKNPENRYQT  263 (277)
T ss_dssp             SSSCCHHHHHHHHHHTCSSGGGSCSS
T ss_pred             ccCCCHHHHHHHHHHccCCHhHCHhH
Confidence            35789999999999999999999965

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.0069  Score=42.12  Aligned_cols=33  Identities=15%  Similarity=0.184  Sum_probs=29.1

Q ss_pred             CCCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccC
Q psy3183          17 FPKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKH   54 (126)
Q Consensus        17 ~p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~h   54 (126)
                      .+..+++++++||.+||..||.+|+++     .+|..|
T Consensus       234 ~~~~~~~~l~~li~~cl~~dp~~RPt~-----~~il~~  266 (276)
T d1uwha_         234 VRSNCPKAMKRLMAECLKKKRDERPLF-----PQILAS  266 (276)
T ss_dssp             SCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHHH
T ss_pred             ccccchHHHHHHHHHHcCCCHhHCcCH-----HHHHHH
Confidence            456789999999999999999999987     888765

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.29  E-value=0.0048  Score=43.06  Aligned_cols=47  Identities=13%  Similarity=0.217  Sum_probs=33.2

Q ss_pred             CCCCCHHHHHHHHHhhhcCcCccCCCCCCChhhhccCCCCC-------CCChhHHh
Q psy3183          18 PKHVTRTAQSLIKALCKESPAERLGYQRGGIVDIKKHKWFQ-------GFDWDGLR   66 (126)
Q Consensus        18 p~~~s~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~hp~f~-------~v~w~~l~   66 (126)
                      +..+++++.+||.+||..+|.+|++.  ..+.++++|+|.+       .+||+.+.
T Consensus       241 ~~~~p~~~~~li~~cl~~~p~~RP~~--~~i~~~l~~~~~~~~~~~~~~~Dw~~~~  294 (299)
T d1ckia_         241 CKGYPSEFATYLNFCRSLRFDDKPDY--SYLRQLFRNLFHRQGFSYDYVFDWNMLK  294 (299)
T ss_dssp             TTTSCHHHHHHHHHHHHSCTTCCCCH--HHHHHHHHHHHHHHTCCCSCCCHHHHGG
T ss_pred             ccCCCHHHHHHHHHHccCChhHCcCH--HHHHHHHHHHHHHcCCCCCCCcCchhhc
Confidence            35789999999999999999999976  1223445555432       35676554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.27  E-value=0.13  Score=35.66  Aligned_cols=26  Identities=27%  Similarity=0.338  Sum_probs=22.4

Q ss_pred             HHHHHHHHHhhhcCcCccCCCCCCChhhhcc
Q psy3183          23 RTAQSLIKALCKESPAERLGYQRGGIVDIKK   53 (126)
Q Consensus        23 ~~a~dli~~lL~~dp~~Rl~~~~~g~~~i~~   53 (126)
                      ....+|+.+||..||.+|+++     .+|..
T Consensus       265 ~~l~~li~~cl~~dp~~Rps~-----~ei~~  290 (303)
T d1vjya_         265 RVMAKIMRECWYANGAARLTA-----LRIKK  290 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCH-----HHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCH-----HHHHH
Confidence            458899999999999999987     77754