Psyllid ID: psy3252

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-----
Protein Sequence
MKIEKFGPRKYEIEASRAQTWSRRAAAYEQSRAEPHLQMKRYLAPTNGTLSVDGAAGSFKNFKSSEPRTNLEPPCRGVRTVASREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRKSQ
Secondary Structure (PSIPRED)
cccccccccccEEEccccHHHHHHHHHHHHHHcccHHHHHHccccccccEEEccccccccccccccccccccccccHHHHHccccHHHHccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHccccccccccccccEEEEEHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccEEcccccEEEEEEcccccccHHHHHHHHHccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccccEccccHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEccccccccHEEcccHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccccHHHHHHHHHHHcHHHHHHHHHHHHHHcccEEEEEccccEcccHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHcccEEEEEccccEEccccccccccccccccccHEHHHccccccccccccccccEEEEEEEcccccHcEHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccc
Coil and Loop (DISEMBL)
mkiekfgprkyEIEASRAQTWSRRAAAYEQsraephlqmkrylaptngtlsvdgaagsfknfksseprtnleppcrgvrtvasrephlqmkrylaptngtlsvtggssgiGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKkacpnpkfiRFIEYEEikkacpnpkfIRFIEYVSLDISKDYENIRSALQpamdrcgpvymLVNCAGMALCGTLEEMTMQDIKVMeqplwlrgyHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSgltitlclppdtdtpgfeneekskpretslisqtgglyrpevvkqsgltitlclppdtdtpgfeneekskpretslisqtgglyrPEVVAKQLLEDAlkgnyfstvGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRKSQ
Flexible Loop (DISEMBL)
mkiekfgprkyeieasraqTWSRRAAAYEQSRAEPHLQMKRYLAPTNGTLSVDGAAGSFknfksseprtnleppcrgvrtvasrephlqmKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQeeikkacpnpkfIRFIEYEEikkacpnpkFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTpgfeneekskpretslisqtgglyrPEVVKQSGLTITLCLPPDTDTpgfeneekskpretslisqtgglyrPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRKSQ
Low Complexity Region (SEG)
MKIEKFGPRKYEIEASRAQTWSRRAAAYEQSRAEPHLQMKRYLAPTNGTLSVDGAAGSFKNFKSSEPRTNLEPPCRGVRTVASREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRKSQ
Disordered region (IsUnstruct)
********************************************************************************************YLA***GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP**************************GLYRPEVVKQSGLTITLCL*************************TGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKC****
Disordered Region (DISOPRED)
******G*RKYEIEAS***TW***AAAYE**RAE**LQMKRYLAPTNGTLSVDGAAGSFKNFKSSEPRTNLEPPCRGVRTVASREPHL*****LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN*****************LYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRK**
Disordered Region (DISEMBL)
MKIEKFGPRKYEIEASRAQTWSRRAAAYEQSRAEPHLQMKRYLAPTNGTLSVDGAAGSFKNFKSSEPRTNLEPPCRGVRTVASREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP***************ISQTGGLYRPEVVKQSGLTITLCLPPDTDTP***************ISQTGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRKSQ
Disordered Region (DISPRO)
*KIEKFGPRKYEIEASRA****************PHLQMKRYLAPTN****************************************LQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRE********GLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRK**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKIEKFGPRKYEIEASRAQTWSRRAAAYEQSRAEPHLQMKRYLAPTNGTLSVDGAAGSFKNFKSSEPRTNLEPPCRGVRTVASREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRKSQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	475	2.2.26 [Sep-21-2011]
Q6GV12	332	3-ketodihydrosphingosine	yes	N/A	0.612	0.876	0.346	2e-60
Q06136	332	3-ketodihydrosphingosine	yes	N/A	0.612	0.876	0.349	7e-60
Q2KIJ5	331	3-ketodihydrosphingosine	yes	N/A	0.610	0.876	0.349	5e-59
Q556J2	334	3-ketodihydrosphingosine	yes	N/A	0.475	0.676	0.315	3e-21
P0CR37	335	3-ketodihydrosphingosine	N/A	N/A	0.454	0.644	0.292	7e-17
P0CR36	335	3-ketodihydrosphingosine	yes	N/A	0.454	0.644	0.288	2e-16
P54554	259	Uncharacterized oxidoredu	yes	N/A	0.385	0.706	0.266	2e-14
Q5BE65	369	3-ketodihydrosphingosine	yes	N/A	0.572	0.737	0.252	3e-13
P16544	261	Putative ketoacyl reducta	yes	N/A	0.381	0.693	0.283	6e-13
O32291	356	Uncharacterized oxidoredu	no	N/A	0.450	0.601	0.252	1e-12

>sp|Q6GV12|KDSR_MOUSE 3-ketodihydrosphingosine reductase OS=Mus musculus GN=Kdsr PE=2 SV=1

 Score =  233 bits (594), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/378 (34%), Positives = 202/378 (53%), Gaps = 87/378 (23%)

Query: 94  LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIR 153
           LA     + VTGGSSGIGK +AIE  K+GA +T+VAR+E KLLQA+++I+K   N K   
Sbjct: 28  LALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKDIEKHSINDK--- 84

Query: 154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
                            + +  +S+D+S+DY  + + ++ A ++ GPV MLVNCAG ++ 
Sbjct: 85  -----------------QVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGTSMS 127

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
           G  EE+ +   +                      ++ +N  G+++ ++A++  MK+R  G
Sbjct: 128 GKFEELEVSSFE---------------------KLMSINYLGSVYPSRAVITTMKERRVG 166

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
            IV  +SQA  LG++G  AY+SSKFA++G AEAL MEVK   + +T+  PPDTDTPG   
Sbjct: 167 RIVFVSSQAGQLGLFGFTAYSSSKFAIRGLAEALQMEVKPYNVYVTVAYPPDTDTPGLAE 226

Query: 334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQ 393
           E K+KP ET LIS+T  + +P                                       
Sbjct: 227 ENKTKPLETRLISETTAICKP--------------------------------------- 247

Query: 394 TGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPL 453
                  E VAKQ+++DA++GN+ S++G + Y++++L  G +P+ SI E   Q   MG  
Sbjct: 248 -------EQVAKQIVKDAIQGNFNSSIGSDGYMLSSLTCGMAPVTSITEGLQQVVTMGLF 300

Query: 454 RLTAIYLHWTFDNIVKKC 471
           R  A++   +FDNIV++C
Sbjct: 301 RTIALFYLGSFDNIVRRC 318

Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).
Mus musculus (taxid: 10090)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0EC: 2

>sp|Q06136|KDSR_HUMAN 3-ketodihydrosphingosine reductase OS=Homo sapiens GN=KDSR PE=1 SV=1

 Score =  231 bits (590), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 204/378 (53%), Gaps = 87/378 (23%)

Query: 94  LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIR 153
           LA     + VTGGSSGIGK +AIE  K+GA +T+VAR+E KLLQA++EI+    N K   
Sbjct: 28  LALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEMHSINDK--- 84

Query: 154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
                            + +  +S+D+S+DY  + + ++ A ++ GPV MLVNCAGMA+ 
Sbjct: 85  -----------------QVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGMAVS 127

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
           G  E++   ++   E+                  ++ +N  G+++ ++A++  MK+R  G
Sbjct: 128 GKFEDL---EVSTFER------------------LMSINYLGSVYPSRAVITTMKERRVG 166

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
            IV  +SQA  LG++G  AY++SKFA++G AEAL MEVK   + IT+  PPDTDTPGF  
Sbjct: 167 RIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTPGFAE 226

Query: 334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQ 393
           E ++KP ET LIS+T  + +P                                       
Sbjct: 227 ENRTKPLETRLISETTSVCKP--------------------------------------- 247

Query: 394 TGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPL 453
                  E VAKQ+++DA++GN+ S++G + Y+++ L  G +P+ SI E   Q   MG  
Sbjct: 248 -------EQVAKQIVKDAIQGNFNSSLGSDGYMLSALTCGMAPVTSITEGLQQVVTMGLF 300

Query: 454 RLTAIYLHWTFDNIVKKC 471
           R  A++   +FD+IV++C
Sbjct: 301 RTIALFYLGSFDSIVRRC 318

Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 2

>sp|Q2KIJ5|KDSR_BOVIN 3-ketodihydrosphingosine reductase OS=Bos taurus GN=KDSR PE=2 SV=1

 Score =  229 bits (583), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 205/378 (54%), Gaps = 88/378 (23%)

Query: 94  LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIR 153
           LA     + VTGGSSGIGK +AIE  K+GA +T+VAR+E KLLQA++EI+K   N K   
Sbjct: 28  LALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDK--- 84

Query: 154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
                            + +  +S+D+S+DY  + + ++ A ++ GPV MLVNCAGM+L 
Sbjct: 85  -----------------QVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLVNCAGMSLS 127

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
           G  E++   ++   E+                  ++ +N  G+++ ++A++  MK+R  G
Sbjct: 128 GKFEDL---EVSTFER------------------LMSINYLGSVYPSRAVIATMKERRMG 166

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
            +V  +SQA  LG++G  AY+SSKFAL+G AEAL MEVK   + +T+  PPDTDTPGF  
Sbjct: 167 RVVFVSSQAGQLGLFGYTAYSSSKFALRGLAEALQMEVKPYNVYVTVAYPPDTDTPGFAK 226

Query: 334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQ 393
           E ++KP ET LIS+T  + +P                                       
Sbjct: 227 ENQTKPLETRLISETTSVCKP--------------------------------------- 247

Query: 394 TGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPL 453
                  E VAKQ+++D ++GN+ S++G + Y++++L  G +P+ SI E   Q   MG  
Sbjct: 248 -------EQVAKQIVKD-VQGNFNSSIGSDGYMLSSLTCGMAPVTSIMEGLQQVVTMGLF 299

Query: 454 RLTAIYLHWTFDNIVKKC 471
           R  A++   +FD+IV++C
Sbjct: 300 RTIALFYLGSFDSIVRRC 317

Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 2

>sp|Q556J2|KDSR_DICDI 3-ketodihydrosphingosine reductase OS=Dictyostelium discoideum GN=ksrA-1 PE=3 SV=1

 Score =  103 bits (256), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 130/266 (48%), Gaps = 40/266 (15%)

Query: 101 LSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           + V GGSSGIGK +  E  K   A +++++R   KL    ++    CP+         E 
Sbjct: 32  IVVVGGSSGIGKELVYELLKENIASISVISRSLDKLRSVVDD----CPS---------EV 78

Query: 160 IKKACP-NPKFIRF-IEYVSLDISKDYENIRSALQ-PAMDRCGPVYMLVNCAGMALCGTL 216
             K+ P N   ++  IE  S DI+   +   +  Q  + ++ G +  L+NCAG A+ G  
Sbjct: 79  CTKSTPLNVGSLKSKIEIYSCDITNKIKVKETIAQIVSKNQGGKIDCLINCAGFAIPGYF 138

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR--GC 274
            E   QD ++ E+ +                   L+ +G+++ TK +V  M + G   G 
Sbjct: 139 IE---QDEEIFEKTM------------------QLDYFGSLYATKEVVPLMIENGGQGGH 177

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
           IV  +S    +G+ G + Y  SKFAL+G AE L  E+K   +T ++  PPDTDTPG++ E
Sbjct: 178 IVFVSSTCGLVGVPGYSTYCPSKFALRGLAETLRSELKPYKITFSVVYPPDTDTPGYQQE 237

Query: 335 EKSKPRETSLISQTGGLYRPEVVKQS 360
             +KP ET  IS  G    P  V +S
Sbjct: 238 NLTKPEETVAISGGGKAVSPLEVAKS 263

Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 2

>sp|P0CR37|TSC10_CRYNB 3-ketodihydrosphingosine reductase TSC10 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=TSC10 PE=3 SV=1

 Score = 89.0 bits (219), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 51/267 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGGSSG+GK +A    K+GAHVTIV RD KK     EE+K                   
Sbjct: 40  ITGGSSGLGKALAERLVKQGAHVTIVGRDSKKAEGVVEELKAI----------------- 82

Query: 163 ACPNPKFIRFIEYVSLDISKDYEN---IRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
           A P     + I+ ++ D++    +   I +A +P  D+  P Y+ + CAG +      E 
Sbjct: 83  AAPG----QIIQCIAADLTSPIASTNAIHAACKPHADQ-APDYVYL-CAGFSRPKLFVET 136

Query: 220 TMQDIKV-MEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           T Q++K  ++   W+  Y                   T H    ++   KQR  G I+  
Sbjct: 137 TKQELKDGLDGVYWVSAY-------------------TAHEACQMMS--KQRRTGKIIFV 175

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK 338
           AS  + +   G ++Y+ +K+AL+G ++AL  E+    + I + LP     PGF+ E ++K
Sbjct: 176 ASFLSYVSFAGYSSYSPAKYALRGLSDALRSEMLLHNIDIHIFLPCGISGPGFDAENRTK 235

Query: 339 PRETSLISQTGGLYRPEVVK---QSGL 362
           P  T  I +      PEV     +SGL
Sbjct: 236 PAVTKKIEEGDTPITPEVCAAALESGL 262

Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 2

>sp|P0CR36|TSC10_CRYNJ 3-ketodihydrosphingosine reductase TSC10 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=TSC10 PE=3 SV=1

 Score = 87.8 bits (216), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 51/267 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGGSSG+GK +A    K+GAHVTIV RD KK     EE+K                   
Sbjct: 40  ITGGSSGLGKALAERLVKQGAHVTIVGRDSKKAEGVVEELKAI----------------- 82

Query: 163 ACPNPKFIRFIEYVSLDISKDYEN---IRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
           A P     + I+ ++ D++    +   I +A +P  D+  P Y+ + CAG +      E 
Sbjct: 83  AAPG----QIIQCIAADLTSPIASTNAIHAACKPHADQ-APDYVYL-CAGFSRPKLFVET 136

Query: 220 TMQDIKV-MEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           T Q++K  ++   W+  Y                   T H    ++   KQR  G I+  
Sbjct: 137 TKQELKDGLDGVYWVSAY-------------------TAHEACQMMS--KQRRTGKIIFV 175

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK 338
           AS  + +   G ++Y+ +K+AL+G ++AL  E+    + I + LP     PGF+ E ++K
Sbjct: 176 ASFLSYVSFAGYSSYSPAKYALRGLSDALRSEMLLHNIDIHIFLPCGISGPGFDAENRTK 235

Query: 339 PRETSLISQTGGLYRPEVVK---QSGL 362
           P  T  I +      P+V     +SGL
Sbjct: 236 PAVTKKIEEGDTPITPDVCAAALESGL 262

Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 2

>sp|P54554|YQJQ_BACSU Uncharacterized oxidoreductase YqjQ OS=Bacillus subtilis (strain 168) GN=yqjQ PE=3 SV=1

 Score = 81.3 bits (199), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 53/236 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S G+G+ +A   A  GAHV + AR E +L++ + +I               EE   
Sbjct: 11  ITGASGGLGERIAYLCAAEGAHVLLSARREDRLIEIKRKIT--------------EEWSG 56

Query: 163 ACPNPKFIRFIEYVSLDISK--DYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
            C         E   LD+ +  D   +R       D+ G + +L+N AG  +  T+ + T
Sbjct: 57  QC---------EIFPLDVGRLEDIARVR-------DQIGSIDVLINNAGFGIFETVLDST 100

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
           + D+K M                      D+N++G I  TKA++  M ++ +G I+  AS
Sbjct: 101 LDDMKAM---------------------FDVNVFGLIACTKAVLPQMLEQKKGHIINIAS 139

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK 336
           QA  +     + Y+++K A+ G++ AL ME+  +G+ +T   P    T  F   +K
Sbjct: 140 QAGKIATPKSSLYSATKHAVLGYSNALRMELSGTGIYVTTVNPGPIQTDFFSIADK 195

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q5BE65|TSC10_EMENI 3-ketodihydrosphingosine reductase tsc10 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tsc10 PE=3 SV=2

 Score = 77.0 bits (188), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 136/341 (39%), Gaps = 69/341 (20%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T+ +TGGS G+GK VA + A++GA++ IVAR  +KL +A E IK +  N    RF     
Sbjct: 50  TVVITGGSEGMGKAVACQLAQKGANIVIVARTLQKLEEAIEAIKGSAANVNKQRF----- 104

Query: 160 IKKACPNPKFIRFIEYVSLDISK--DYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
                          Y+S D++K  + E I + +    D   P  +   CAG    G   
Sbjct: 105 --------------HYISADLTKPEECERIMTEVTEWNDGMPPDIVWC-CAGYCTPGYFV 149

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG--RGCI 275
           E ++Q +K     ++    +T  A+ R W V               +    QR   R  +
Sbjct: 150 ETSVQTLKDQMDTVYWTAANTAHAILRKWLV--------------PINPSHQRPLPRRHL 195

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE 335
           + T S  A + I G A Y+ +K A++  ++ L  E++                  +    
Sbjct: 196 IFTCSTLAFVPIAGYAPYSPAKAAMRALSDTLCQEIEV-----------------YNGSR 238

Query: 336 KSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTG 395
            SK R  +          P  VK     I    P    +PGF+NE++ KP  T  +    
Sbjct: 239 ASKERARA---------TPADVK-----IHTVFPMGILSPGFDNEQQIKPALTKQLESAD 284

Query: 396 GLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSP 436
               P+ VA+  +E   +G Y  T      ++     G SP
Sbjct: 285 KPQTPKEVARIAIEAIERGEYLITTMFVGDVMKGAALGPSP 325

Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 2

>sp|P16544|ACT3_STRCO Putative ketoacyl reductase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=actIII PE=1 SV=1

 Score = 75.9 bits (185), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 48/229 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 11  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 61  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 106 --------LWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 144

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 145 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 193

Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (taxid: 100226)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|O32291|YXNA_BACSU Uncharacterized oxidoreductase YxnA OS=Bacillus subtilis (strain 168) GN=yxnA PE=3 SV=2

 Score = 75.1 bits (183), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 51/265 (19%)

Query: 101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           + +TG SSGIG   A  AA++GA V   AR+E+ L +  +E+K+   +  +++       
Sbjct: 34  IVITGASSGIGLVTARMAAEKGAKVVAAARNEEALKELTDELKEKGHDAIWVK------- 86

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                             D+ K+ E++    + A+   G     VN A ++  G   ++T
Sbjct: 87  -----------------ADVGKE-EDVNRIAETAISTFGRFDTWVNNAAVSTFGHAMDVT 128

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITA 279
           ++D+K M                      D N +G ++ T+A V+    RG  G ++   
Sbjct: 129 VEDMKRM---------------------FDTNFWGPVYGTRAAVKHYTGRGVPGALINVG 167

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEV--KQSGLTITLCLPPDTDTPGFENEEKS 337
           S   + G    + Y S+KFAL G+ E++ ME+  +Q+ +++TL  P   DTP   NE   
Sbjct: 168 SLFGDRGTVIQSTYASAKFALHGWTESIRMELEKEQAPVSVTLIHPGRIDTP--YNEHAH 225

Query: 338 KPRETSLISQTGGLYRPEVVKQSGL 362
              +         +Y PE V ++ L
Sbjct: 226 SYLDKQPAHYRSMIYPPEAVAEAIL 250

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	475
193702247	331	PREDICTED: 3-ketodihydrosphingosine redu	0.595	0.854	0.418	6e-71
239792001	357	ACYPI008870 [Acyrthosiphon pisum]	0.6	0.798	0.411	2e-70
383855592	330	PREDICTED: 3-ketodihydrosphingosine redu	0.612	0.881	0.411	7e-70
307214950	333	3-ketodihydrosphingosine reductase [Harp	0.614	0.876	0.412	1e-68
350414452	333	PREDICTED: 3-ketodihydrosphingosine redu	0.604	0.861	0.410	5e-68
91082711	322	PREDICTED: similar to short-chain dehydr	0.633	0.934	0.388	2e-67
340715362	333	PREDICTED: 3-ketodihydrosphingosine redu	0.604	0.861	0.407	1e-66
380020332	359	PREDICTED: 3-ketodihydrosphingosine redu	0.608	0.805	0.405	2e-66
66510879	333	PREDICTED: 3-ketodihydrosphingosine redu	0.604	0.861	0.407	4e-66
332373460	332	unknown [Dendroctonus ponderosae]	0.589	0.843	0.398	4e-65

>gi|193702247|ref|XP_001945578.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Acyrthosiphon pisum]

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 201/370 (54%), Gaps = 87/370 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGSSGIGK +A+EAAK GA+VTIVAR+E +L  A EEIK  C          Y + K 
Sbjct: 38  VTGGSSGIGKCIALEAAKIGANVTIVARNENRLRSALEEIKGQCS---------YNDQK- 87

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y+S+D++ DY  +++ L  A+D  GP+ + +NCAGMA+CGTLE+++  
Sbjct: 88  ----------FNYLSVDLAGDYNMVKTTLNNAIDEMGPLCLFINCAGMAICGTLEDISSN 137

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           DI  M                     I+ NL  TI  TKA+V  MKQ G G IVIT+S A
Sbjct: 138 DIMKM---------------------INTNLISTIQATKAIVNEMKQNGYGSIVITSSLA 176

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           +  GIYGL+ Y+++KFAL+GFAEAL ME K  G+ +TL LPPDTDTPG+ NE K KP ET
Sbjct: 177 SFCGIYGLSVYSATKFALRGFAEALSMETKNFGIKVTLALPPDTDTPGYANESKDKPLET 236

Query: 343 SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEV 402
            LIS+T  L+ PE                                               
Sbjct: 237 LLISETANLFTPE----------------------------------------------E 250

Query: 403 VAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHW 462
           V +Q+L+D L G +FSTVG E +++T  CAG +P  S  E   Q F  G LRL  +Y   
Sbjct: 251 VGRQILQDTLDGRFFSTVGFEGHMMTISCAGMAPYTSYLELICQVFCAGILRLITVYYQS 310

Query: 463 TFDNIVKKCR 472
           TFD I+KKC+
Sbjct: 311 TFDKIIKKCK 320

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239792001|dbj|BAH72390.1| ACYPI008870 [Acyrthosiphon pisum]

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/372 (41%), Positives = 200/372 (53%), Gaps = 87/372 (23%)

Query: 101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
             VTGGSSGIGK +A+EAAK GA+VTIVAR+E +L  A EEIK  C          Y + 
Sbjct: 62  FQVTGGSSGIGKCIALEAAKIGANVTIVARNENRLRSALEEIKGQCS---------YNDQ 112

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
           K             Y+S+D++ DY  +++ L  A+D  GP+ + +NCAGMA+CGTLE+++
Sbjct: 113 K-----------FNYLSVDLAGDYNMVKTTLNNAIDEMGPLCLFINCAGMAICGTLEDIS 161

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
             DI  M                     I+ NL  TI  TKA+V  MKQ G G IVIT+S
Sbjct: 162 SNDIMKM---------------------INTNLISTIQATKAIVNEMKQNGYGSIVITSS 200

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR 340
            A+  GIYGL+ Y+++KFAL+GFAEAL ME K  G+ +TL LPPDTDTPG+ NE K KP 
Sbjct: 201 LASFCGIYGLSVYSATKFALRGFAEALSMETKNFGIKVTLALPPDTDTPGYANESKDKPL 260

Query: 341 ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRP 400
           ET LIS+T  L+ P                                              
Sbjct: 261 ETLLISETANLFTP---------------------------------------------- 274

Query: 401 EVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYL 460
           E V +Q+ +D L G +FSTVG E +++T  CAG +P     E   Q F  G LRL  +Y 
Sbjct: 275 EEVGRQIFQDTLDGRFFSTVGFEGHMMTIFCAGMAPYTFYLELICQVFCAGILRLITVYY 334

Query: 461 HWTFDNIVKKCR 472
            +TFD I+KKC+
Sbjct: 335 QFTFDKIIKKCK 346

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855592|ref|XP_003703294.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Megachile rotundata]

 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 155/377 (41%), Positives = 204/377 (54%), Gaps = 86/377 (22%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
            N  + VTGGSSGIGK VAI AAK GAHVTI+ARD +KL  A+ EI +AC N        
Sbjct: 31  NNKHVVVTGGSSGIGKCVAILAAKHGAHVTIIARDTQKLEVARNEIIRACKN-------- 82

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                      K ++ +EY+SLDI +DY+ +  AL       GP+YMLVNCAG A+CG +
Sbjct: 83  -----------KNVQKVEYLSLDIGEDYDAVEKALNDLERTMGPIYMLVNCAGTAICGKI 131

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           E+ ++ D+K M                     ID+N  G+ + TKA+   MK    G I+
Sbjct: 132 EDTSVADLKKM---------------------IDINFLGSYYCTKAVTPRMKASQEGIII 170

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK 336
           +T+SQAA LGI+G +AY S+KFAL+G AE++ ME+    +++TLCLPPDTDTPGF  EE 
Sbjct: 171 LTSSQAALLGIFGYSAYCSTKFALRGLAESISMELSPYNISVTLCLPPDTDTPGFAIEEL 230

Query: 337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGG 396
           SKP ET LISQT  L  PEV                                        
Sbjct: 231 SKPLETKLISQTASLVSPEV---------------------------------------- 250

Query: 397 LYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLT 456
                 VA +L +DAL G +FSTVG+E +++T LCAG SP  SI E   Q+ L+G  RL 
Sbjct: 251 ------VADKLFKDALAGKFFSTVGIEGFMLTVLCAGMSPFNSIMELLSQSMLVGLFRLA 304

Query: 457 AIYLHWTFDNIVKKCRK 473
           + +    F  I++ C K
Sbjct: 305 SAWYLVNFKKIIQNCMK 321

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307214950|gb|EFN89795.1| 3-ketodihydrosphingosine reductase [Harpegnathos saltator]

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/378 (41%), Positives = 209/378 (55%), Gaps = 86/378 (22%)

Query: 98  NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY 157
           N  + VTGGSSGIGKHVAI AAK GA+VTI+ARD  KL  A++EI  +  N         
Sbjct: 35  NKHIVVTGGSSGIGKHVAIIAAKHGANVTIIARDVVKLEVARKEILNSRTN--------- 85

Query: 158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
                     K  + +EY+SLDI  +YEN+  AL       GP+YML+NCAG A  G +E
Sbjct: 86  ----------KDEQMVEYLSLDIGGNYENVDKALADLEKTMGPIYMLINCAGFATPGKIE 135

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           + ++Q++  M                     I++NL GT +  KA+V+ MK  G G IVI
Sbjct: 136 DTSIQNLHEM---------------------INVNLVGTYYCIKAVVQRMKTAGEGAIVI 174

Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS 337
           TASQA+ LGIYGL+AY+S+KFAL+G AE+L ME++   +++TL LPPDTDTPG+  E++ 
Sbjct: 175 TASQASLLGIYGLSAYSSTKFALRGLAESLTMELRPYNISVTLSLPPDTDTPGYATEQQI 234

Query: 338 KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGL 397
           KP ET LISQT GL  P V                                         
Sbjct: 235 KPLETHLISQTAGLADPAV----------------------------------------- 253

Query: 398 YRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTA 457
                VA++L +DA  G +FSTVG E +++TTLCAG SP  SI E  +QA LMG +RL +
Sbjct: 254 -----VAEKLFKDARAGKFFSTVGQEGFILTTLCAGMSPFTSISELLLQASLMGLMRLVS 308

Query: 458 IYLHWTFDNIVKKCRKSQ 475
            +   +F  I+  C K++
Sbjct: 309 AFYLVSFQRIILNCMKTR 326

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350414452|ref|XP_003490322.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Bombus impatiens]

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 153/373 (41%), Positives = 204/373 (54%), Gaps = 86/373 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGSSGIGK VAI AAK GAHVTI+ARD  KL  A+ EI  AC N              
Sbjct: 40  VTGGSSGIGKCVAILAAKCGAHVTIIARDVHKLEVARNEIIHACKN-------------- 85

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                K ++ +EY+SLDI +DY  +  AL       GP+YMLVNCAG A+CG +E+ ++ 
Sbjct: 86  -----KDVQKVEYLSLDIGEDYNAVEKALSDLERTMGPIYMLVNCAGTAICGKIEDTSIA 140

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D++ M                     I++N  GT +  KA+V+ MK    G IV+T+SQA
Sbjct: 141 DLQKM---------------------ININFLGTYYCIKAVVQRMKASQEGIIVLTSSQA 179

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A LGI+G +AY S+KFAL+G AE++ ME+    +++TL LPPDTDTPGF  EE SKP ET
Sbjct: 180 ALLGIFGYSAYCSTKFALRGLAESISMELAPYNISVTLSLPPDTDTPGFAIEELSKPLET 239

Query: 343 SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEV 402
            LIS+T  L  PEV                                              
Sbjct: 240 KLISETSALVSPEV---------------------------------------------- 253

Query: 403 VAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHW 462
           VA +L +DAL G +FSTVG+E +++T LC+G SP+ SI+E F+Q+ LMG  RL +     
Sbjct: 254 VANKLFKDALAGKFFSTVGMEGFMLTVLCSGMSPLNSIRELFLQSMLMGIFRLVSACYLV 313

Query: 463 TFDNIVKKCRKSQ 475
            F  I++ C K++
Sbjct: 314 HFRTIIQNCMKTR 326

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91082711|ref|XP_972119.1| PREDICTED: similar to short-chain dehydrogenase [Tribolium castaneum]

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 218/396 (55%), Gaps = 95/396 (23%)

Query: 77  GVRTVASREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL 136
            +R +  R P    KR++        +TGGSSGIGK  AI+AA++GA+VTI+AR+  +L 
Sbjct: 15  ALRLIKQRTPKSLDKRHVV-------ITGGSSGIGKSTAIQAARKGANVTIIARNLDRLS 67

Query: 137 QAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMD 196
            A++EI+ AC        I  ++I            I  VS+D+S +  +I+  L    +
Sbjct: 68  AAEKEIRGAC--------IHKDQI------------ITAVSVDVS-NKTSIQKELTNVEE 106

Query: 197 RCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT 256
           + GP+YMLVNCAGMA+CG +E+ T QD+K                     T+I+ N  GT
Sbjct: 107 KVGPIYMLVNCAGMAICGKVEDFTEQDVK---------------------TLINANYLGT 145

Query: 257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL 316
           ++  +++V   K R  G IV+TASQ A +G+YG + Y S KFAL+G AE+L ME+K   +
Sbjct: 146 LYPIQSVVPRFKDRQEGIIVLTASQVALMGMYGYSIYASCKFALRGLAESLSMELKPYNV 205

Query: 317 TITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG 376
           ++TL LPPDTDTPG+ENE K+KP ET LIS+ GGL +PEV                    
Sbjct: 206 SVTLALPPDTDTPGYENENKTKPTETQLISEAGGLLKPEV-------------------- 245

Query: 377 FENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSP 436
                                     VA++LL+DAL   +FS VGLESY++TTLC G +P
Sbjct: 246 --------------------------VAEKLLKDALTQKFFSYVGLESYILTTLCVGMTP 279

Query: 437 IVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCR 472
              + E  IQ+ L+GPLRL   Y   TF +I+++C 
Sbjct: 280 CADLLELMIQSVLLGPLRLIGAYYLRTFHSIIQRCH 315

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715362|ref|XP_003396184.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Bombus terrestris]

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/373 (40%), Positives = 202/373 (54%), Gaps = 86/373 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGSSGIGK VAI AAK GAHVTI+ARD  KL  A+ EI  AC N              
Sbjct: 40  VTGGSSGIGKCVAILAAKCGAHVTIIARDVHKLEVARNEIIHACKN-------------- 85

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                K ++ +E +SLDI +DY  +  AL       GP+YMLVNCAG A+CG +E+ ++ 
Sbjct: 86  -----KDVQKVECLSLDIGEDYNAVEKALSDLERTMGPIYMLVNCAGTAICGKIEDTSIA 140

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D++ M                     I +N  GT +  KA+V+ MK    G IV+T+SQA
Sbjct: 141 DLQKM---------------------ISINFLGTYYCIKAVVQRMKASQEGIIVLTSSQA 179

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A LGI+G +AY S+KFAL+G AE++ ME+    +++TL LPPDTDTPGF  EE SKP ET
Sbjct: 180 ALLGIFGYSAYCSTKFALRGLAESISMELAPYNISVTLSLPPDTDTPGFAIEELSKPLET 239

Query: 343 SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEV 402
            LIS+T  L  PEV                                              
Sbjct: 240 KLISETSALVSPEV---------------------------------------------- 253

Query: 403 VAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHW 462
           VA +L +DAL G +FSTVG+E +++T LC+G SP+ SI+E F+Q+ LMG  RL +     
Sbjct: 254 VANKLFKDALAGKFFSTVGMEGFMLTVLCSGMSPLNSIRELFLQSMLMGIFRLVSACYLV 313

Query: 463 TFDNIVKKCRKSQ 475
            F  I++ C K++
Sbjct: 314 HFRTIIQNCMKTR 326

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020332|ref|XP_003694042.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Apis florea]

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/375 (40%), Positives = 204/375 (54%), Gaps = 86/375 (22%)

Query: 101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           ++VTGGSSGIGK +AI AAK GAHVTI+ARD +KL  A+ EI  AC N            
Sbjct: 64  INVTGGSSGIGKCIAILAAKYGAHVTIIARDIQKLEIARNEIIHACKN------------ 111

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                  K I+ +EY+SLD+ +DY  +  AL       GP+YMLVNCAG A+CG +E+ +
Sbjct: 112 -------KDIQKVEYLSLDVGEDYNAVDKALNDIERTMGPIYMLVNCAGTAICGKIEDTS 164

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
             D++ M                     I++N  G+ + TKA+V+ MK    G IV T+S
Sbjct: 165 PADLQKM---------------------ININFLGSYYCTKAVVQRMKAAQEGIIVFTSS 203

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR 340
           QAA LGI+G +AY S+KFAL+G AE++ ME+    +++TL LPPDT+TPGF  EE SKP 
Sbjct: 204 QAALLGIFGYSAYCSTKFALRGLAESISMELAPYNISVTLSLPPDTNTPGFAIEELSKPL 263

Query: 341 ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRP 400
           ET LIS T  L  PE                                             
Sbjct: 264 ETKLISSTSSLVSPE--------------------------------------------- 278

Query: 401 EVVAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYL 460
            +VA++L +DAL G +FSTVGLE +++T LC+G SP  SI+E FIQ+ LMG  RL +   
Sbjct: 279 -LVAEKLFKDALAGKFFSTVGLEGFILTVLCSGMSPFNSIRELFIQSILMGIFRLISACY 337

Query: 461 HWTFDNIVKKCRKSQ 475
              F  I+  C K++
Sbjct: 338 LVHFQKIILNCMKTR 352

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66510879|ref|XP_392423.2| PREDICTED: 3-ketodihydrosphingosine reductase-like isoform 1 [Apis mellifera]

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 152/373 (40%), Positives = 202/373 (54%), Gaps = 86/373 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGSSGIGK +AI AAK GAHVTI+ARD +KL  A+ EI  AC N              
Sbjct: 40  VTGGSSGIGKCIAILAAKYGAHVTIIARDIQKLEIARNEIIHACKN-------------- 85

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                K I+ +EY+SLD+ +DY+ I  AL       GP+YMLVNCAG A+CG +E+ +  
Sbjct: 86  -----KDIQKVEYLSLDVGEDYDAIDKALNDIEKTMGPIYMLVNCAGTAICGKIEDTSPA 140

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D++ M                     I++N  G+ + TKA+V+ MK    G IV T+SQA
Sbjct: 141 DLQKM---------------------ININFLGSYYCTKAVVQRMKAAQEGIIVFTSSQA 179

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A LGI+G +AY S+KFAL+G AE++ ME+    +++TL LPPDT+TPGF  EE SKP ET
Sbjct: 180 ALLGIFGYSAYCSTKFALRGLAESISMELAPYNISVTLSLPPDTNTPGFAIEELSKPLET 239

Query: 343 SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEV 402
            LIS T  L  PE                                              +
Sbjct: 240 KLISSTSSLVSPE----------------------------------------------L 253

Query: 403 VAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHW 462
           VA +L +DAL G +FSTVG+E +++T LC+G SP  SI+E FIQ+ LMG  RL +     
Sbjct: 254 VADKLFKDALAGKFFSTVGMEGFILTVLCSGMSPFNSIRELFIQSMLMGIFRLISACYLI 313

Query: 463 TFDNIVKKCRKSQ 475
            F  I+  C K++
Sbjct: 314 HFQKIILNCMKTR 326

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373460|gb|AEE61871.1| unknown [Dendroctonus ponderosae]

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 147/369 (39%), Positives = 202/369 (54%), Gaps = 89/369 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGGSSGIGK +AI AAK+GAHVTIVAR+  KL  A +EI+            E ++I  
Sbjct: 44  ITGGSSGIGKALAILAAKKGAHVTIVARNVDKLRVAMQEIEDHAN--------EAQKINS 95

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A             S+D+S D E I           GP+YMLVNCAG+A+CG LE+M   
Sbjct: 96  A-------------SIDVS-DKEAIEKNFAELESTVGPIYMLVNCAGLAICGRLEDMKQN 141

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D+K                      +ID+NL GTI+  +A++   K+R  G IV+TAS  
Sbjct: 142 DVK---------------------HLIDVNLLGTIYPIQAVLPKFKERKEGIIVLTASAV 180

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A +G++G + Y+S KFAL+G AE+LYMEVK   +++TL LPPDTDTPGFENE K+KP+ET
Sbjct: 181 ALMGMFGYSIYSSCKFALRGLAESLYMEVKPYNISVTLALPPDTDTPGFENENKTKPKET 240

Query: 343 SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEV 402
            ++S++GGLY  E                                               
Sbjct: 241 KIMSESGGLYSAE----------------------------------------------T 254

Query: 403 VAKQLLEDALKGNYFSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHW 462
           VA QL+ DALK ++FS+VG ES+++TTLC G SP  S+ +  +Q+ ++GP RL A +   
Sbjct: 255 VATQLMNDALKQHFFSSVGFESFVLTTLCVGMSPFHSLVDVIVQSMVIGPFRLFAAFFVK 314

Query: 463 TFDNIVKKC 471
            F++I  KC
Sbjct: 315 YFESIAIKC 323

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	475
ZFIN|ZDB-GENE-040426-853	359	kdsr "3-ketodihydrosphingosine	0.231	0.306	0.481	7.2e-52
UNIPROTKB|F1MLE5	321	KDSR "3-ketodihydrosphingosine	0.235	0.348	0.486	1.9e-50
UNIPROTKB|Q06136	332	KDSR "3-ketodihydrosphingosine	0.235	0.337	0.486	3.4e-37
FB|FBgn0039304	336	CG10425 [Drosophila melanogast	0.244	0.345	0.5	1.6e-42
UNIPROTKB|F1SMW5	332	KDSR "Uncharacterized protein"	0.235	0.337	0.495	2.7e-38
UNIPROTKB|Q2KIJ5	331	KDSR "3-ketodihydrosphingosine	0.235	0.338	0.486	3.5e-38
RGD|1307775	332	Kdsr "3-ketodihydrosphingosine	0.235	0.337	0.486	1e-37
MGI|MGI:1918000	332	Kdsr "3-ketodihydrosphingosine	0.235	0.337	0.486	1.6e-37
UNIPROTKB|F1NJB4	332	KDSR "Uncharacterized protein"	0.225	0.322	0.485	9.2e-37
UNIPROTKB|B4DMX0	268	KDSR "3-ketodihydrosphingosine	0.242	0.429	0.443	3.8e-36

ZFIN|ZDB-GENE-040426-853 kdsr "3-ketodihydrosphingosine reductase" [Danio rerio (taxid:7955)]

 Score = 288 (106.4 bits), Expect = 7.2e-52, Sum P(3) = 7.2e-52
 Identities = 53/110 (48%), Positives = 79/110 (71%)

Query:   248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
             ++++N  G+++ T+A++  MK+R  G I+  +SQA  +G++G  AY+ SKFAL+G AEAL
Sbjct:   168 MMEVNYLGSVYPTRAVITTMKERRMGRIMFVSSQAGQIGLFGYTAYSPSKFALRGLAEAL 227

Query:   308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVV 357
              ME+K   + +T+  PPDTDTPGF  E K+KP ET LIS+T G+ +PE V
Sbjct:   228 QMEMKPYNIYVTVAYPPDTDTPGFAEENKTKPLETKLISETSGVSQPEQV 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1MLE5 KDSR "3-ketodihydrosphingosine reductase" [Bos taurus (taxid:9913)]

 Score = 285 (105.4 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
 Identities = 55/113 (48%), Positives = 80/113 (70%)

Query:   248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
             ++ +N  G+++ ++A++  MK+R  G +V  +SQA  LG++G  AY+SSKFAL+G AEAL
Sbjct:   130 LMSINYLGSVYPSRAVIATMKERRMGRVVFVSSQAGQLGLFGYTAYSSSKFALRGLAEAL 189

Query:   308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPE-VVKQ 359
              MEVK   + +T+  PPDTDTPGF  E ++KP ET LIS+T  + +PE V KQ
Sbjct:   190 QMEVKPYNVYVTVAYPPDTDTPGFAKENQTKPLETRLISETTSVCKPEQVAKQ 242

GO:0047560 "3-dehydrosphinganine reductase activity" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA

GO:0006666 "3-keto-sphinganine metabolic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q06136 KDSR "3-ketodihydrosphingosine reductase" [Homo sapiens (taxid:9606)]

 Score = 282 (104.3 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
 Identities = 55/113 (48%), Positives = 80/113 (70%)

Query:   248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
             ++ +N  G+++ ++A++  MK+R  G IV  +SQA  LG++G  AY++SKFA++G AEAL
Sbjct:   141 LMSINYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEAL 200

Query:   308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPE-VVKQ 359
              MEVK   + IT+  PPDTDTPGF  E ++KP ET LIS+T  + +PE V KQ
Sbjct:   201 QMEVKPYNVYITVAYPPDTDTPGFAEENRTKPLETRLISETTSVCKPEQVAKQ 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006666 "3-keto-sphinganine metabolic process" evidence=IDA

GO:0047560 "3-dehydrosphinganine reductase activity" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006665 "sphingolipid metabolic process" evidence=TAS

GO:0030148 "sphingolipid biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

FB|FBgn0039304 CG10425 [Drosophila melanogaster (taxid:7227)]

 Score = 307 (113.1 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
 Identities = 58/116 (50%), Positives = 82/116 (70%)

Query:   358 KQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYF 417
             ++ G+++TL +P DT+TPGFE EEKSKPRET +IS  GGL  PEV+AK +L+DALKG + 
Sbjct:   208 REHGVSVTLAMPCDTNTPGFEEEEKSKPRETKIISGGGGLIEPEVMAKAILKDALKGKFT 267

Query:   418 STVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRK 473
             STVG ES+LITTL     P        + A ++GPLR+ +  LH  F+++++KC +
Sbjct:   268 STVGAESWLITTLGGALLPWDGFFTNLLHAIVLGPLRIVSYALHKYFNSVIRKCAR 323

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|F1SMW5 KDSR "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 286 (105.7 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
 Identities = 56/113 (49%), Positives = 80/113 (70%)

Query:   248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
             ++ +N  G+++ ++A++  MK+R  G IV  +SQA  LG++G  AY+SSKFA++G AEAL
Sbjct:   141 LMSVNYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSSSKFAIRGLAEAL 200

Query:   308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPE-VVKQ 359
              MEVK   + +T+  PPDTDTPGF  E K+KP ET LIS+T  + +PE V KQ
Sbjct:   201 QMEVKPYNVYVTVAYPPDTDTPGFAEENKTKPLETRLISETTSVCKPEQVAKQ 253

GO:0047560 "3-dehydrosphinganine reductase activity" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA

GO:0006666 "3-keto-sphinganine metabolic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q2KIJ5 KDSR "3-ketodihydrosphingosine reductase" [Bos taurus (taxid:9913)]

 Score = 285 (105.4 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 55/113 (48%), Positives = 80/113 (70%)

Query:   248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
             ++ +N  G+++ ++A++  MK+R  G +V  +SQA  LG++G  AY+SSKFAL+G AEAL
Sbjct:   141 LMSINYLGSVYPSRAVIATMKERRMGRVVFVSSQAGQLGLFGYTAYSSSKFALRGLAEAL 200

Query:   308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPE-VVKQ 359
              MEVK   + +T+  PPDTDTPGF  E ++KP ET LIS+T  + +PE V KQ
Sbjct:   201 QMEVKPYNVYVTVAYPPDTDTPGFAKENQTKPLETRLISETTSVCKPEQVAKQ 253

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0047560 "3-dehydrosphinganine reductase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1307775 Kdsr "3-ketodihydrosphingosine reductase" [Rattus norvegicus (taxid:10116)]

 Score = 281 (104.0 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
 Identities = 55/113 (48%), Positives = 79/113 (69%)

Query:   248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
             ++ +N  G+++ ++A++  MK+R  G IV  +SQA  LG++G  AY+SSKFA++G AEAL
Sbjct:   141 LMSINYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSSSKFAIRGLAEAL 200

Query:   308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPE-VVKQ 359
              MEVK   + +T+  PPDTDTPG   E K+KP ET LIS+T  + +PE V KQ
Sbjct:   201 QMEVKPYNVYVTVAYPPDTDTPGLAEENKTKPLETRLISETTAVCKPEQVAKQ 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006666 "3-keto-sphinganine metabolic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA;ISO

GO:0047560 "3-dehydrosphinganine reductase activity" evidence=IEA

MGI|MGI:1918000 Kdsr "3-ketodihydrosphingosine reductase" [Mus musculus (taxid:10090)]

 Score = 282 (104.3 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
 Identities = 55/113 (48%), Positives = 79/113 (69%)

Query:   248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
             ++ +N  G+++ ++A++  MK+R  G IV  +SQA  LG++G  AY+SSKFA++G AEAL
Sbjct:   141 LMSINYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSSSKFAIRGLAEAL 200

Query:   308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPE-VVKQ 359
              MEVK   + +T+  PPDTDTPG   E K+KP ET LIS+T  + +PE V KQ
Sbjct:   201 QMEVKPYNVYVTVAYPPDTDTPGLAEENKTKPLETRLISETTAICKPEQVAKQ 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0006666 "3-keto-sphinganine metabolic process" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IGI

GO:0047560 "3-dehydrosphinganine reductase activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|F1NJB4 KDSR "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 272 (100.8 bits), Expect = 9.2e-37, Sum P(2) = 9.2e-37
 Identities = 52/107 (48%), Positives = 74/107 (69%)

Query:   251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYME 310
             +N  G+++ ++A++  MK+R  G IV  +SQA  LG++G  AY+ +KFAL+G AEAL ME
Sbjct:   144 VNYLGSVYPSRAVISTMKERRMGRIVFVSSQAGQLGLFGYTAYSPTKFALRGLAEALQME 203

Query:   311 VKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVV 357
             VK   + +T+  PPDTDTPGF  E K+KP ET LIS+T  + + E V
Sbjct:   204 VKPYNIYVTVAYPPDTDTPGFAEESKTKPLETKLISETSSVCQAEQV 250

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006666 "3-keto-sphinganine metabolic process" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA

GO:0047560 "3-dehydrosphinganine reductase activity" evidence=IEA

UNIPROTKB|B4DMX0 KDSR "3-ketodihydrosphingosine reductase" [Homo sapiens (taxid:9606)]

 Score = 273 (101.2 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
 Identities = 51/115 (44%), Positives = 78/115 (67%)

Query:   357 VKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNY 416
             VK   + IT+  PPDTDTPGF  E ++KP ET LIS+T  + +PE VAKQ+++DA++GN+
Sbjct:   140 VKPYNVYITVAYPPDTDTPGFAEENRTKPLETRLISETTSVCKPEQVAKQIVKDAIQGNF 199

Query:   417 FSTVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKC 471
              S++G + Y+++ L  G +P+ SI E   Q   MG  R  A++   +FD+IV++C
Sbjct:   200 NSSLGSDGYMLSALTCGMAPVTSITEGLQQVVTMGLFRTIALFYLGSFDSIVRRC 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2KIJ5	KDSR_BOVIN	1, ., 1, ., 1, ., 1, 0, 2	0.3492	0.6105	0.8761	yes	N/A
Q06136	KDSR_HUMAN	1, ., 1, ., 1, ., 1, 0, 2	0.3492	0.6126	0.8765	yes	N/A
Q6GV12	KDSR_MOUSE	1, ., 1, ., 1, ., 1, 0, 2	0.3465	0.6126	0.8765	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.691
4th Layer	1.1.1.102	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.58	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	475
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-69
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-42
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	8e-40
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-35
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-35
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-35
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-33
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-32
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-30
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	9e-30
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-27
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-27
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-27
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-26
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	3e-25
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-25
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	4e-25
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	5e-25
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-24
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-24
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	8e-24
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-23
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	6e-23
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-22
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	6e-22
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-22
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-21
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	5e-21
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	8e-21
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-20
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	5e-20
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	5e-20
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	8e-20
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-19
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-19
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-19
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	4e-19
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	6e-19
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-18
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-18
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	8e-18
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-17
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-17
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-17
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-17
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-17
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-17
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-17
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	5e-17
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	5e-17
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-16
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-16
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-16
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-16
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-16
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-16
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	5e-16
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-16
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	8e-16
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	9e-16
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-15
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-15
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-15
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-15
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-15
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-15
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-15
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	4e-15
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-15
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-14
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-14
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-14
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-14
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	4e-14
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	7e-14
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-13
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	1e-13
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-13
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-13
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-13
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	4e-13
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-13
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	5e-13
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-13
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	8e-13
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-12
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-12
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-12
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-12
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-12
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	5e-12
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	8e-12
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	9e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	9e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-11
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-11
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-11
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-11
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-11
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-11
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-11
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-11
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-11
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-11
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-11
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	4e-11
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	4e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	5e-11
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	5e-11
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	6e-11
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	6e-11
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	9e-11
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-10
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-10
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-10
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	1e-10
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-10
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-10
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-10
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-10
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-10
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	4e-10
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	5e-10
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	5e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	5e-10
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	7e-10
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	8e-10
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	8e-10
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-09
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-09
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-09
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-09
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-09
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-09
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-09
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	4e-09
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-09
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	4e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	4e-09
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	4e-09
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	6e-09
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-08
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-08
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-08
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	3e-08
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	4e-08
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	6e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	6e-08
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	7e-08
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	7e-08
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	8e-08
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	8e-08
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	8e-08
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-08
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	9e-08
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-07
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-07
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-07
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-07
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-07
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-07
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	4e-07
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	5e-07
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-06
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-06
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-06
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-06
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-06
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-06
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-06
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-06
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-06
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-06
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	6e-06
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	7e-06
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	8e-06
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	9e-06
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-05
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-05
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-05
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-05
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	3e-05
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-05
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-05
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	4e-05
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-05
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	6e-05
pfam08659	181	pfam08659, KR, KR domain	8e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-04
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-04
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	1e-04
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-04
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	5e-04
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	7e-04
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	9e-04
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	0.001
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	0.001
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	0.002
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	0.002
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	0.003
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	0.003
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	0.004
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	0.004
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	0.004
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	0.004
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	0.004
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  220 bits (564), Expect = 2e-69
 Identities = 95/255 (37%), Positives = 140/255 (54%), Gaps = 42/255 (16%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGGSSGIGK +A E  K GA+V IVAR E KL +A EEI+                   
Sbjct: 6   ITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQK---------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     + Y+S D+S DYE +  A   A+++ GP  ++VNCAG+++ G  E++T +
Sbjct: 56  ----------VSYISADLS-DYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAE 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           + +                       +D+N +G++++  A++  MK++  G IV  +SQA
Sbjct: 105 EFE---------------------RGMDVNYFGSLNVAHAVLPLMKEQRPGHIVFVSSQA 143

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A +GIYG +AY  SKFAL+G AE+L  E+K   + +++  PPDTDTPGFE E K+KP ET
Sbjct: 144 ALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRVSVVYPPDTDTPGFEEENKTKPEET 203

Query: 343 SLISQTGGLYRPEVV 357
             I  + G   PE  
Sbjct: 204 KAIEGSSGPITPEEA 218

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  148 bits (376), Expect = 7e-42
 Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 48/256 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIG+ +A   A+ GA V +  R+E+ L      I+    N              
Sbjct: 3   VTGASSGIGRAIARRLAREGAKVVLADRNEEAL-AELAAIEALGGN-------------- 47

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+S D E++ + ++ A++  G + +LVN AG+A  G LEE+T +
Sbjct: 48  ----------AVAVQADVS-DEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDE 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                        V+D+NL G   +T+A +  MK++G G IV  +S A
Sbjct: 97  DWD---------------------RVLDVNLTGVFLLTRAALPHMKKQGGGRIVNISSVA 135

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE-EKSKPRE 341
               + G AAY +SK AL+G   +L +E+   G+ +    P   DTP       +   +E
Sbjct: 136 GLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKE 195

Query: 342 TSLISQTGGLYRPEVV 357
            +     G L  PE V
Sbjct: 196 LAAAIPLGRLGTPEEV 211

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  143 bits (364), Expect = 8e-40
 Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 45/242 (18%)

Query: 93  YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFI 152
                  T  +TG SSGIG  +A + A+RG ++ +VAR E KL    +E++         
Sbjct: 1   PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELED-------- 52

Query: 153 RFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL 212
                          K    +E +  D+S D E +        +R GP+ +LVN AG   
Sbjct: 53  ---------------KTGVEVEVIPADLS-DPEALERLEDELKERGGPIDVLVNNAGFGT 96

Query: 213 CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR 272
            G   E+++ + + M                     I LN+     +TKA++ GM +RG 
Sbjct: 97  FGPFLELSLDEEEEM---------------------IQLNILALTRLTKAVLPGMVERGA 135

Query: 273 GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
           G I+   S A  +    +A Y+++K  +  F+EAL  E+K +G+ +T   P  T T  F+
Sbjct: 136 GHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD 195

Query: 333 NE 334
            +
Sbjct: 196 AK 197

Length = 265

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  132 bits (334), Expect = 1e-35
 Identities = 80/277 (28%), Positives = 116/277 (41%), Gaps = 61/277 (22%)

Query: 87  HLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR--DEKKLLQAQEEIKK 144
            L  K  L        VTG SSGIG+ +A   A+ GA V + AR  +E+        IK+
Sbjct: 2   DLSGKVAL--------VTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKE 53

Query: 145 ACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYML 204
           A                              V+ D+S D E++ + +  A +  G + +L
Sbjct: 54  A-----------------------GGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDIL 90

Query: 205 VNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKAL 263
           VN AG+A     LEE+T +D        W R             VID+NL G   +T+A 
Sbjct: 91  VNNAGIAGPDAPLEELTEED--------WDR-------------VIDVNLLGAFLLTRAA 129

Query: 264 VEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           +  MK++    IV  +S A   G  G AAY +SK AL G  +AL +E+   G+ +    P
Sbjct: 130 LPLMKKQR---IVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAP 186

Query: 324 PDTDTPGFENEEKSKPRETSLISQT---GGLYRPEVV 357
              DTP     E ++      ++     G L  PE V
Sbjct: 187 GYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEV 223

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  132 bits (334), Expect = 1e-35
 Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 54/243 (22%)

Query: 88  LQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACP 147
           LQ K  L        VTG S GIG+ +A+  A  GA V I   +E+       E++ A  
Sbjct: 3   LQGKTAL--------VTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGG 54

Query: 148 NPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNC 207
             + + F                        D+S D   +R+ ++ A++  G + +LVN 
Sbjct: 55  EARVLVF------------------------DVS-DEAAVRALIEAAVEAFGALDILVNN 89

Query: 208 AGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM 267
           AG+     L  M+ +D                   W    VID+NL GT ++ +A +  M
Sbjct: 90  AGITRDALLPRMSEED-------------------WDR--VIDVNLTGTFNVVRAALPPM 128

Query: 268 KQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD 327
            +   G IV  +S +   G  G   Y+++K  + GF +AL +E+   G+T+    P   D
Sbjct: 129 IKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFID 188

Query: 328 TPG 330
           T  
Sbjct: 189 TDM 191

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  131 bits (333), Expect = 1e-35
 Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 54/254 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG  +A+  A +G  V   AR+  KL   +   +    N              
Sbjct: 5   ITGCSSGIGLALALALAAQGYRVIATARNPDKL---ESLGELLNDN-------------- 47

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +E + LD++ D E+I++A++  ++R G + +LVN AG  L G LEE +++
Sbjct: 48  ----------LEVLELDVT-DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIE 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +++                      + ++N++G + +T+A +  M+++G G IV  +S A
Sbjct: 97  EVR---------------------ELFEVNVFGPLRVTRAFLPLMRKQGSGRIVNVSSVA 135

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
             +    L  Y +SK AL+  +E+L +E+   G+ +T+  P    T   +N   S     
Sbjct: 136 GLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEPGPVRTGFADNAAGSALE-- 193

Query: 343 SLISQTGGLYRPEV 356
                    Y PE 
Sbjct: 194 ---DPEISPYAPER 204

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  127 bits (321), Expect = 1e-33
 Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 45/226 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+ +A   A+ GA + + AR E++L    EE+K  C                
Sbjct: 8   ITGASSGIGEELAYHLARLGARLVLSARREERL----EEVKSECLEL------------- 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
               P        V LD+S D E+    ++ A+   G + +L+N AG+++     + ++ 
Sbjct: 51  --GAPS----PHVVPLDMS-DLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSID 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
             +                      ++++N +G + +TKA +  + +R +G IV+ +S A
Sbjct: 104 VDR---------------------KIMEVNYFGPVALTKAALPHLIERSQGSIVVVSSIA 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
             +G+    AY +SK AL+GF ++L  E+ +  +++T+  P   DT
Sbjct: 143 GKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVTVVCPGLIDT 188

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  125 bits (315), Expect = 3e-32
 Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 59/267 (22%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIK----KACPNPKFI 152
               + +TG S+G+G+  A   A+RGA V ++AR E+ L     EI+    +A       
Sbjct: 7   GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALA----- 61

Query: 153 RFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL 212
                                  V  D++ D E +++A   A +  GP+   VN A + +
Sbjct: 62  -----------------------VVADVA-DAEAVQAAADRAEEELGPIDTWVNNAMVTV 97

Query: 213 CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR 272
            G  E++T ++ +                  R   V ++   G +H T A +  M+ R R
Sbjct: 98  FGPFEDVTPEEFR------------------R---VTEVTYLGVVHGTLAALRHMRPRDR 136

Query: 273 GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL--PPDTDTPG 330
           G I+   S  A   I   +AY ++K A++GF ++L  E+   G  +++ +  PP  +TP 
Sbjct: 137 GAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ 196

Query: 331 FENEEKSKPRETSLISQTGGLYRPEVV 357
           F+      P E   +     +Y+PEVV
Sbjct: 197 FDWARSRLPVEPQPVPP---IYQPEVV 220

Length = 334

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  116 bits (292), Expect = 7e-30
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 46/221 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG   GIG+ VAI  AK G +V ++AR E+ L    EE++                +K 
Sbjct: 12  ITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-------------YGVKV 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                         + D+S DYE + +A++   +  G + +L+N AG++  G   E+   
Sbjct: 59  V-----------IATADVS-DYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPA 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +        W +             +I +NL G  + T+A++  M +R  G I+  +S A
Sbjct: 107 E--------WEK-------------IIQVNLMGVYYATRAVLPSMIERQSGDIINISSTA 145

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
              G    +AY++SKF + G  E+L  EV++  + +T   P
Sbjct: 146 GQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTP 186

Length = 239

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score =  115 bits (291), Expect = 9e-30
 Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 51/257 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+  A+  A+RGA V + AR  + L +   E++              E   +
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVR--------------ELGGE 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A            V  D++ D   +  A   A++R G +   VN AG+A+ G  E++T +
Sbjct: 51  AIA----------VVADVA-DAAQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPE 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           + +                      V D+N  G ++ T A +  +++RG G ++   S  
Sbjct: 100 EFR---------------------RVFDVNYLGHVYGTLAALPHLRRRGGGALINVGSLL 138

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL--PPDTDTPGFENEEKSKPR 340
                   AAY++SK A++GF E+L  E+   G  I++ L  P   +TP F +      +
Sbjct: 139 GYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPTAMNTPFFGHARSYMGK 198

Query: 341 ETSLISQTGGLYRPEVV 357
           +         +Y+PE V
Sbjct: 199 KPKPPPP---IYQPERV 212

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (276), Expect = 2e-27
 Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 47/228 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG + G+G+ +A+  A+ GA V +  R DE+   +  E +             E    +
Sbjct: 11  VTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAV-------------EALGRR 57

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                       + V  D++ D   + +A+  A++R G + +LVN AG+     L +M+ 
Sbjct: 58  -----------AQAVQADVT-DKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSD 105

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            +                   W    VID+NL G  H+ +A+V  M+++  G IV  +S 
Sbjct: 106 DE-------------------WD--EVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSV 144

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A   G  G + Y ++K  L G  +AL  E+ + G+T+ +  P D DT 
Sbjct: 145 AGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTD 192

Length = 249

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  109 bits (275), Expect = 2e-27
 Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 48/221 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+  A   A+ GA V + AR E++L                      E +  
Sbjct: 11  ITGASSGIGEATARALAEAGAKVVLAARREERL----------------------EALAD 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  +     ++LD++ D   + +A++   +  G + +LVN AG+AL   L+E  + 
Sbjct: 49  EIGAGAAL----ALALDVT-DRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLD 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D   M                     ID N+ G ++ T+A++ GM +R  G I+   S A
Sbjct: 104 DWDRM---------------------IDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
                 G A Y ++K A++ F+  L  E+  +G+ +T+  P
Sbjct: 143 GRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISP 183

Length = 246

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  109 bits (274), Expect = 2e-27
 Identities = 73/241 (30%), Positives = 105/241 (43%), Gaps = 51/241 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG+ +A+E AKRGA V I+  +EK   +    ++KA     +     Y+    
Sbjct: 4   ITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHY-----YK---- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+SK  E +  A +      G V +L+N AG+     L E+  +
Sbjct: 55  -C--------------DVSK-REEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDE 98

Query: 223 DI-KVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +I K  E           LA +  WT            TKA +  M +R  G IV  AS 
Sbjct: 99  EIEKTFEVNT--------LAHF--WT------------TKAFLPDMLERNHGHIVTIASV 136

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT---ITLCLPPDTDTPGFENEEKSK 338
           A  +   GLA Y +SK A  GF E+L +E+K  G      TL  P   +T  F+  +  +
Sbjct: 137 AGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLVCPYFINTGMFQGVKTPR 196

Query: 339 P 339
           P
Sbjct: 197 P 197

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  106 bits (266), Expect = 4e-26
 Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 47/233 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG+ +A+  A  GA V +V           E ++ A                 
Sbjct: 11  VTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGK-------------- 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +D+  D   +++A+   ++  G + +LV  AG+       EM  +
Sbjct: 57  ----------ARARQVDVR-DRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDE 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W    VID+NL GT  +T+A +  + + G G IV+T+S A
Sbjct: 106 Q-------------------WE--RVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVA 144

Query: 283 A-NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
              +G  GLA Y +SK  L GF  AL +E+    +T+    P   DTP   N 
Sbjct: 145 GPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL 197

Length = 251

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 3e-25
 Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 62/236 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG+  A+  A +GA + +  RD   L Q   + +                   
Sbjct: 5   VTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADAR------------------- 45

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRS------ALQPAMDRCGPVYMLVNCAGMALCGTL 216
           A          E+ +LDIS DY+ + +      A   +MD      +++N AG++  GT+
Sbjct: 46  ALGG----TVPEHRALDIS-DYDAVAAFAADIHAAHGSMD------VVMNIAGISAWGTV 94

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           + +T +                    WR   ++D+NL G IH+ +  V  M   GRG  +
Sbjct: 95  DRLTHEQ-------------------WRR--MVDVNLMGPIHVIETFVPPMVAAGRGGHL 133

Query: 277 ITASQAANLGIYGL---AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           +  S AA  G+  L   AAY++SKF L+G +E L  ++ + G+ +++ +P    TP
Sbjct: 134 VNVSSAA--GLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTP 187

Length = 272

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 4e-25
 Identities = 62/227 (27%), Positives = 91/227 (40%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIGK  A+  AK G  + +VAR +  L     E++                   
Sbjct: 11  ITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELR------------------- 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  ++     S+D+S + E I   +   +++ G   +L+N AGMA  G L EM + 
Sbjct: 52  ----STGVK-AAAYSIDLS-NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLS 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        W               VI LNL        A++ GM+ RG G I+  +S A
Sbjct: 106 D--------WQW-------------VIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIA 144

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A        AY  SK AL  F + L  E +  G+ +        +TP
Sbjct: 145 ARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTP 191

Length = 241

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 4e-25
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 46/226 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG+ +A+  A+ GA + + AR+E +L    +E+                    
Sbjct: 6   ITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH----------------- 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  +     V  D+S D E     ++ A+ R G + +LVN AG+ +    +E+T  
Sbjct: 49  --GGEALV-----VPTDVS-DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELT-- 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D+ V E+                  V+ +N  G ++ T A +  +K   RG IV+ +S A
Sbjct: 99  DLSVFER------------------VMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLA 139

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
              G+   + Y +SK AL GF ++L +E+   G+ +T+  P    T
Sbjct: 140 GLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVAT 185

Length = 263

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  102 bits (257), Expect = 5e-25
 Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A+  A  GA V +  R E+   +  EEIK    N              
Sbjct: 5   VTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAA----------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D+S D E + + ++      GPV +LVN AG+     L  M+ +
Sbjct: 54  -------------LEADVS-DREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEE 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W +  VI++NL G  ++T+A++  M +R  G I+  +S  
Sbjct: 100 D-------------------WDA--VINVNLTGVFNVTQAVIRAMIKRRSGRIINISSVV 138

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
             +G  G A Y +SK  + GF ++L  E+   G+T+    P   DT 
Sbjct: 139 GLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVAPGFIDTD 185

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score =  100 bits (252), Expect = 2e-24
 Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+ +A E AK G +V + AR   +L + + E+                    
Sbjct: 3   ITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLN------------------ 44

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
             PNP     I    LD++ D E  +  +       G + +++  AG+    +L      
Sbjct: 45  --PNPSVEVEI----LDVT-DEERNQLVIAELEAELGGLDLVIINAGVGKGTSLG----- 92

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                            L+       ID NL G   + +A +   + +GRG +V+ +S A
Sbjct: 93  ----------------DLSFKAFRETIDTNLLGAAAILEAALPQFRAKGRGHLVLISSVA 136

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A  G+ G AAY++SK AL   AE+L  +VK+ G+ +T+  P   DTP
Sbjct: 137 ALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGFIDTP 183

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  100 bits (251), Expect = 5e-24
 Identities = 62/217 (28%), Positives = 89/217 (41%), Gaps = 47/217 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A   A +GA+V I  A  E        EI                   
Sbjct: 10  VTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL---------------- 53

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                 K +     V  D+S D E++  A+  A    G V +LVN AG+     L  M  
Sbjct: 54  ----GGKAL----AVQGDVS-DAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKE 104

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D        W R             VID NL G  ++TKA+   M ++  G I+  +S 
Sbjct: 105 ED--------WDR-------------VIDTNLTGVFNLTKAVARPMMKQRSGRIINISSV 143

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
              +G  G A Y +SK  + GF ++L  E+   G+T+
Sbjct: 144 VGLMGNPGQANYAASKAGVIGFTKSLARELASRGITV 180

Length = 248

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 8e-24
 Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 48/244 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSG G    +E AK+G  V    R+ +K      +  +                  
Sbjct: 8   VTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQN------------ 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I+   LD++ D  +I +  Q  +   G + +LVN AG A  G +EE+ ++
Sbjct: 56  ----------IKVQQLDVT-DQNSIHNF-QLVLKEIGRIDLLVNNAGYANGGFVEEIPVE 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +        + + + T             N++G I +T+A++  M+++  G I+  +S +
Sbjct: 104 E--------YRKQFET-------------NVFGAISVTQAVLPYMRKQKSGKIINISSIS 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE---NEEKSKP 339
             +G  GL+ Y SSK+AL+GF+E+L +E+K  G+ + L  P   +T  +E      +++ 
Sbjct: 143 GRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQS 202

Query: 340 RETS 343
             TS
Sbjct: 203 ETTS 206

Length = 280

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 99.2 bits (248), Expect = 2e-23
 Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 52/230 (22%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
            +++TGG+ GIG   A   A  GA V I   DE    +   E+                 
Sbjct: 7   VVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLV-------------- 52

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEE 218
                             LD++ D  +  + L       GP+ +LVN AG M +   L+E
Sbjct: 53  --------------VGGPLDVT-DPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDE 97

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
                    +         TR        ++D+N+YG I  +K     M  RGRG +V  
Sbjct: 98  P--------DAV-------TRR-------ILDVNVYGVILGSKLAAPRMVPRGRGHVVNV 135

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           AS A  + + G+A Y +SK A+ GF +A  +E++ +G+ +++ LP   +T
Sbjct: 136 ASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT 185

Length = 273

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 97.0 bits (242), Expect = 6e-23
 Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 49/235 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGGS GIG  +A      G  V I ARD+K+L +A  E+                    
Sbjct: 11  ITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN---------------KGN 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  +R           D  +++ A+   +   G + +L+  AG+     +EE+T +
Sbjct: 56  VLGLAADVR-----------DEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPE 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   VID NL G  +  KA V  +K RG G I+  +S A
Sbjct: 105 E-------------------WR--LVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLA 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS 337
                 G AAY +SKF L GF+EA  ++++Q G+ ++  +P    T  F     S
Sbjct: 143 GTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATH-FNGHTPS 196

Length = 237

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 94.7 bits (236), Expect = 3e-22
 Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 50/230 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  +A   A+ G  V++  R+ + L                           
Sbjct: 5   VTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDV----------------- 47

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      E V  D  +D E+ R+ +    DR G + +LV+ AG+    TL E +  
Sbjct: 48  -----------EAVPYDA-RDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDA 95

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +++               A +       +N+     +T+AL+  +++ G G +V   S +
Sbjct: 96  ELE---------------AHF------SINVIAPAELTRALLPALREAGSGRVVFLNSLS 134

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
               + G A Y++SKFAL+  A AL  E    G+ ++   P   DTP  +
Sbjct: 135 GKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPGFVDTPMAQ 184

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 92.2 bits (230), Expect = 6e-22
 Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 53/208 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ--EEIKKACPNPKFIRFIEYEE 159
           +TGG+ G+G  +A   A  GA H+ +V+R       A+   E++                
Sbjct: 5   ITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEAL-------------- 50

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                        +   + D++ D + + + L       GP+  +V+ AG+   G LEE+
Sbjct: 51  ----------GAEVTVAACDVA-DRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEEL 99

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           T +  +                      V+   + G  ++ +   +       G  V+ +
Sbjct: 100 TPERFE---------------------RVLAPKVTGAWNLHELTRD----LDLGAFVLFS 134

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEAL 307
           S A  LG  G A Y ++  AL   AE  
Sbjct: 135 SVAGVLGSPGQANYAAANAALDALAEHR 162

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.8 bits (234), Expect = 9e-22
 Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 47/215 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A   AK GA V I    +E+   +  EEIK+   +   +         
Sbjct: 10  VTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV--------- 60

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           KA               D+S   E++ + ++  +++ G + +LVN AG++  G + +MT 
Sbjct: 61  KA---------------DVSS-EEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTD 104

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           ++                   W    VID+NL G + +T+  +  M +R  G IV  +S 
Sbjct: 105 EE-------------------WDR--VIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSI 143

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL 316
              +G      Y++SK A+  F +AL  E+  SG+
Sbjct: 144 WGLIGASCEVLYSASKGAVNAFTKALAKELAPSGI 178

Length = 247

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 65/244 (26%), Positives = 97/244 (39%), Gaps = 48/244 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VT  SSGIG  +A   A+ GA V I AR+ + L +A  E++                   
Sbjct: 6   VTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVL------------ 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D++ D E+I   ++ A D  G V +LVN AG    G   E+T +
Sbjct: 54  ------------AVVADLT-DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDE 100

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        WL  +             DL L   I + +A++ GMK+RG G IV  +S  
Sbjct: 101 D--------WLEAF-------------DLKLLSVIRIVRAVLPGMKERGWGRIVNISSLT 139

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN--EEKSKPR 340
                  L     ++  L G  + L  E+   G+T+   LP   DT       E +++  
Sbjct: 140 VKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVLPGYIDTERVRRLLEARAEKE 199

Query: 341 ETSL 344
             S+
Sbjct: 200 GISV 203

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 91.6 bits (228), Expect = 5e-21
 Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG  VA   A+ GA V  V R+ ++LL+   ++++         F  Y+    
Sbjct: 3   VTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRR-----YGYPFATYK---- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          LD++ D   +   +Q      GP+ +LVN AG+   G ++ ++ +
Sbjct: 54  ---------------LDVA-DSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDE 97

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D +                         +N +G  ++++A+   MK+R  G IV   S A
Sbjct: 98  DWQAT---------------------FAVNTFGVFNVSQAVSPRMKRRRSGAIVTVGSNA 136

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           AN+   G+AAY +SK AL    + L +E+   G+   +  P  TDT 
Sbjct: 137 ANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGSTDTE 183

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 91.1 bits (226), Expect = 8e-21
 Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIG+  A   A  GA V I AR   +L    +E++                   
Sbjct: 8   VTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGK-------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        + LD++ D + + +A++  ++  G + +LVN AG+ L G +E+    
Sbjct: 54  ----------ALVLELDVT-DEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTT 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        W R             +ID NL G ++ T A +     R +G IV  +S A
Sbjct: 103 D--------WTR-------------MIDTNLLGLMYTTHAALPHHLLRNKGTIVNISSVA 141

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
             + +   A Y ++KF +  F+E L  EV + G+ + +  P   DT 
Sbjct: 142 GRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVVIEPGTVDTE 188

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 90.1 bits (224), Expect = 2e-20
 Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 54/261 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ G+G   A      GA V +    +++   A  E+  A                 
Sbjct: 10  VTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA----------------- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +  LD++ + +   + +  A +  G + +LVN AG+   GT+E     
Sbjct: 53  ----------ARFFHLDVTDE-DGWTAVVDTAREAFGRLDVLVNNAGILTGGTVE----- 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                          T L  WR   ++D+NL G    T+A++  MK+ G G I+  +S  
Sbjct: 97  --------------TTTLEEWR--RLLDINLTGVFLGTRAVIPPMKEAGGGSIINMSSIE 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL--CLPPDTDTPGFENEEKSKPR 340
             +G   LAAY +SK A++G  ++  +E    G  I +    P    TP  +        
Sbjct: 141 GLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRVNSVHPGYIYTPMTDELLI-AQG 199

Query: 341 ETSLISQT--GGLYRPEVVKQ 359
           E      T  G    P+ +  
Sbjct: 200 EMGNYPNTPMGRAGEPDEIAY 220

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 89.1 bits (221), Expect = 5e-20
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 50/227 (22%)

Query: 100 TLSVTGGSSGIGKHVAIEAA---KRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
            + +TG SSGIG H+A+  A    +   V    RD KK  +  E                
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGT------- 54

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                           +E + LD+    +++ +A++   +R   V +LV  AG+ L G L
Sbjct: 55  ----------------LETLQLDVCDS-KSVAAAVERVTER--HVDVLVCNAGVGLLGPL 95

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           E ++   +                      +V D+N++GT+ M +A +  MK+RG G I+
Sbjct: 96  EALSEDAMA---------------------SVFDVNVFGTVRMLQAFLPDMKRRGSGRIL 134

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           +T+S     G+     Y +SKFAL+G  E+L +++    + ++L   
Sbjct: 135 VTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVHLSLIEC 181

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 89.2 bits (222), Expect = 5e-20
 Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 48/225 (21%)

Query: 104 TGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKA 163
           TG S GIG+ +A   A  GA + +V R+ +KL                      E +   
Sbjct: 11  TGASGGIGQALAEALAAAGARLLLVGRNAEKL----------------------EALAAR 48

Query: 164 CPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQD 223
            P P       +V  D++   E  R A+       G + +L+N AG+     LE+   + 
Sbjct: 49  LPYPGRH---RWVVADLTS--EAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEA 103

Query: 224 IKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAA 283
           I+ +                     + LNL   + +T+AL+  ++ +    +V   S   
Sbjct: 104 IERL---------------------LALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFG 142

Query: 284 NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           ++G  G A+Y +SKFAL+GF+EAL  E+  +G+ +    P  T T
Sbjct: 143 SIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRT 187

Length = 263

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 88.6 bits (220), Expect = 8e-20
 Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 51/217 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SGIG  +A   A +GA V ++ R E        E+            +     K 
Sbjct: 20  VTGGASGIGHAIAELFAAKGARVALLDRSE-----DVAEVAAQ---------LLGGNAKG 65

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D+S D +++ +A+   +   G + +LVN AG+AL    E+++ +
Sbjct: 66  -------------LVCDVS-DSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEE 111

Query: 223 DIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           D                      W   ID+NL G+  M +A+   M   G G IV  ASQ
Sbjct: 112 D----------------------WDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQ 149

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           A  + +    AY +SK  + G  + L +E    G+T+
Sbjct: 150 AGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITV 186

Length = 255

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 87.6 bits (217), Expect = 1e-19
 Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 53/228 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA-QEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+  A      G  V I ARDE +L  A  +E++                  
Sbjct: 5   VTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLG-------------- 50

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMT 220
                         ++ D+ +D  ++R A+  AM+   G +  LVN AG+ +   +EE+T
Sbjct: 51  --------------LAGDV-RDEADVRRAVD-AMEEAFGGLDALVNNAGVGVMKPVEELT 94

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            ++                   W    V+D NL G  +        + +RG G IV   S
Sbjct: 95  PEE-------------------W--RLVLDTNLTGAFYCIHKAAPALLRRGGGTIVNVGS 133

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
            A      G AAY +SKF L G +EA  ++++++ + +   +P   DT
Sbjct: 134 LAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 86.5 bits (215), Expect = 3e-19
 Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 54/226 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIGK  A E AKRG +V +++R ++KL    +EI++                  
Sbjct: 6   VTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEE------------------ 47

Query: 163 ACPNPKFIRFIEYVSLDISK---DYENIRSALQPAMDRCGPVYMLVNCAGMA--LCGTLE 217
                K+    + ++ D S     YE I   L+        + +LVN  G++  +     
Sbjct: 48  -----KYGVETKTIAADFSAGDDIYERIEKELEGL-----DIGILVNNVGISHSIPEYFL 97

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           E    ++                       +I++N+  T+ MT+ ++ GM +R +G IV 
Sbjct: 98  ETPEDEL---------------------QDIINVNVMATLKMTRLILPGMVKRKKGAIVN 136

Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            +S A  +    LA Y++SK  L  F+ ALY E K  G+ +   LP
Sbjct: 137 ISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSLLP 182

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 86.7 bits (215), Expect = 3e-19
 Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 48/240 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A   A  GA+V +    E+    A +    A  +              
Sbjct: 6   VTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSV------------- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y+  D++   + I   +  A    G + +LVN AG+     +EE   +
Sbjct: 53  -----------IYLPADVT-KEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPE 100

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                        +I + L    H  +A +  MK++G G I+  AS  
Sbjct: 101 DWD---------------------RIIAVMLTSAFHTIRAALPHMKKQGWGRIINIASAH 139

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN--EEKSKPR 340
             +     +AY ++K  L G  + L +EV + G+T+    P    TP  E    +++K R
Sbjct: 140 GLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAICPGYVRTPLVEKQIADQAKTR 199

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 86.9 bits (216), Expect = 4e-19
 Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 49/228 (21%)

Query: 96  PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFI 155
            +  T  +TG SSG G+ +A  A   G  V    R E       E +             
Sbjct: 2   SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR-ADFEALHPDRALA------ 54

Query: 156 EYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT 215
                                 LD++ D++ I + +  A    GP+ +LVN AG    G 
Sbjct: 55  --------------------RLLDVT-DFDAIDAVVADAEATFGPIDVLVNNAGYGHEGA 93

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
           +EE  + +++                        ++N++G + MTKA++ GM+ R RG I
Sbjct: 94  IEESPLAEMRRQ---------------------FEVNVFGAVAMTKAVLPGMRARRRGHI 132

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           V   S    + + G+  Y  SKFAL+G +E+L  EV   G+ +T   P
Sbjct: 133 VNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEP 180

Length = 277

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 85.4 bits (212), Expect = 6e-19
 Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 56/261 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+SGIG   A    K+GA V I+ R+E     A  E++   P  K   F++      
Sbjct: 5   ITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVK-ATFVQC----- 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D++  +E + +A + A+++ G V +L+N AG+     L+E +  
Sbjct: 57  ----------------DVTS-WEQLAAAFKKAIEKFGRVDILINNAGI-----LDEKSYL 94

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR---GCIVITA 279
               +  P W +              ID+NL G I+ T   +  M +      G IV   
Sbjct: 95  FAGKLPPP-WEK-------------TIDVNLTGVINTTYLALHYMDKNKGGKGGVIVNIG 140

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVK-QSGLTI-TLCLPPDTDTPGFENEEKS 337
           S A          Y++SK  + GF  +L   ++ ++G+ +  +C P  T+TP   +    
Sbjct: 141 SVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRVNAIC-PGFTNTPLLPDLVAK 199

Query: 338 -KPRETSLISQTGGLYRPEVV 357
                 S  +Q+     PEVV
Sbjct: 200 EAEMLPSAPTQS-----PEVV 215

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 55/227 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG  VA+   + GA V    +                       F+  E+   
Sbjct: 13  VTGAAQGIGYAVALAFVEAGAKVIGFDQA----------------------FLTQEDYPF 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A              LD+S D   +    Q  +   GP+ +LVN AG+   G  + ++ +
Sbjct: 51  AT-----------FVLDVS-DAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDE 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        W +                +N  G  ++ +A++   +++  G IV   S A
Sbjct: 99  D--------WQQ-------------TFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNA 137

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A++   G+AAY +SK AL   A+ + +E+   G+   +  P  TDT 
Sbjct: 138 AHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTD 184

Length = 252

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 84.5 bits (209), Expect = 2e-18
 Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 48/229 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A                 
Sbjct: 8   VTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVE-------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      +  + D+ +    I + +  A+ R GP+ +LVN AG +  G   E+  +
Sbjct: 54  ----------ADGRTCDV-RSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADE 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G I+  AS
Sbjct: 103 --------LWL-------------DVVETNLTGVFRVTKEVLKAGGMLERGTGRIINIAS 141

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 142 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 190

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 82.4 bits (204), Expect = 8e-18
 Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 46/216 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  +A   A+ GA++ I +R+E+K  +AQ+ I+K                  
Sbjct: 10  VTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC-------- 61

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+S D E I++A++   +  G + +LVN AG+      EE    
Sbjct: 62  ----------------DVS-DEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEA 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   VID+NL G   +++A+   M ++G G I+   S  
Sbjct: 105 E-------------------WRD--VIDVNLNGVFFVSQAVARHMIKQGHGKIINICSLL 143

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           + LG   + AY +SK  + G  +AL  E  + G+ +
Sbjct: 144 SELGGPPVPAYAASKGGVAGLTKALATEWARHGIQV 179

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 82.0 bits (203), Expect = 1e-17
 Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 52/207 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SG+G         +GA V I+           +                      
Sbjct: 7   VTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDNC----------------- 49

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTM 221
                       +V +D++   +++++AL  A  + G + ++VNCAG+A+   T  +   
Sbjct: 50  -----------RFVPVDVT-SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQ 97

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRG-----RGCI 275
           Q                 L L++   VI++NL GT ++ +     M K        RG I
Sbjct: 98  Q--------------PHSLELFQR--VINVNLIGTFNVIRLAAGAMGKNEPDQGGERGVI 141

Query: 276 VITASQAANLGIYGLAAYTSSKFALKG 302
           + TAS AA  G  G AAY++SK  + G
Sbjct: 142 INTASVAAFEGQIGQAAYSASKGGIVG 168

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 81.7 bits (202), Expect = 1e-17
 Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 43/232 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGGS G+G+ +A+  A  GA V ++     +     + +                 I+ 
Sbjct: 11  ITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVA--------------AGIEA 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A      + F      D+ +D+   R+AL   ++  G + +LVN AG+A      E++++
Sbjct: 57  AGGKALGLAF------DV-RDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIE 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITASQ 281
           +                   W    VID+NL G  ++T+A +  M + R  G IV  AS 
Sbjct: 110 E-------------------WDD--VIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASV 148

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
           A   G  G   Y +SK  L G  + L  E+   G+T+    P   +TP  +N
Sbjct: 149 AGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN 200

Length = 249

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 81.4 bits (201), Expect = 2e-17
 Identities = 57/210 (27%), Positives = 83/210 (39%), Gaps = 55/210 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+      AK GA V  V+R +  L     E    CP               
Sbjct: 12  VTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE----CPG-------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     IE V +D+S D++    AL       GPV +LVN A +A+     E+T +
Sbjct: 54  ----------IEPVCVDLS-DWDATEEALGSV----GPVDLLVNNAAVAILQPFLEVTKE 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQ 281
                                RS+ V   N+   IH+++ +  GM  RG  G IV  +SQ
Sbjct: 99  AFD------------------RSFDV---NVRAVIHVSQIVARGMIARGVPGSIVNVSSQ 137

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEV 311
           A+   +     Y S+K AL    + + +E+
Sbjct: 138 ASQRALTNHTVYCSTKAALDMLTKVMALEL 167

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 58/248 (23%), Positives = 87/248 (35%), Gaps = 70/248 (28%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SGIGK  A E AKRGAHV I  R+E+K  +A  EIKK   N K            
Sbjct: 6   ITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAK------------ 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE----- 217
                     +E + LD+S    ++R   +  + R   + +L+N AG+            
Sbjct: 54  ----------VEVIQLDLS-SLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGF 102

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           E+                               +N  G   +T  L+  +K      IV 
Sbjct: 103 ELQFA----------------------------VNYLGHFLLTNLLLPVLKASAPSRIVN 134

Query: 278 TAS---QAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            +S   +A  +                 AY  SK A   F   L   ++ +G+T+    P
Sbjct: 135 VSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTRELARRLEGTGVTVNALHP 194

Query: 324 PDTDTPGF 331
               T   
Sbjct: 195 GVVRTELL 202

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 81.4 bits (201), Expect = 2e-17
 Identities = 55/228 (24%), Positives = 86/228 (37%), Gaps = 47/228 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG  +A E    G  V  +A        A                 ++ E   
Sbjct: 7   VTGAKRGIGSAIARELLNDGYRV--IATYFSGNDCA----------------KDWFEEYG 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              +      +    LD++ D E    AL    +  GPV +LVN AG+      + M+ Q
Sbjct: 49  FTEDQ-----VRLKELDVT-DTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQ 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWT-VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                      W  VI+ NL    ++T+ L   M ++G G I+  +S 
Sbjct: 103 E----------------------WNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSV 140

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
               G +G   Y+++K  + GF +AL  E  + G+T+    P    TP
Sbjct: 141 NGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATP 188

Length = 245

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 81.0 bits (200), Expect = 2e-17
 Identities = 53/227 (23%), Positives = 84/227 (37%), Gaps = 48/227 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG  G+G+  A   A RGA V ++ R    L Q                      +  
Sbjct: 12  ITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQT---------------------LPG 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              +   I  I+ V      D +  R A+     + G +  LVN AG  + GT+ +    
Sbjct: 51  VPADALRIGGIDLV------DPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDAD 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                                    +  +N+  T++ +KA +  +   G G IV   + A
Sbjct: 105 TWD---------------------RMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGA 143

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A     G+ AY ++K  +    EAL  E+   G+T+   LP   DTP
Sbjct: 144 ALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTP 190

Length = 239

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 69/237 (29%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIG+  A + A+ G  V   +R+                              +
Sbjct: 9   VTGASSGIGRATAEKLARAGYRVFGTSRN----------------------------PAR 40

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A P P      E + LD++ D  ++++A+   + R G + +LVN AG+ L G  EE ++ 
Sbjct: 41  AAPIPGV----ELLELDVTDD-ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIA 95

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
             +                      + D N++G + MT+A++  M+ +G G I+      
Sbjct: 96  QAQ---------------------ALFDTNVFGILRMTRAVLPHMRAQGSGRII------ 128

Query: 283 ANLG-IYGL------AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
            N+  + G       A Y +SK A++G++E+L  EV+Q G+ ++L  P  T T  F+
Sbjct: 129 -NISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTN-FD 183

Length = 270

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 80.4 bits (198), Expect = 5e-17
 Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 46/236 (19%)

Query: 98  NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY 157
           + T  VTGG  GIG       A+ GA V +   +     +A E++               
Sbjct: 3   DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN----REAAEKVAAD------------ 46

Query: 158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
             I+    N       +  + DI+ D +++ +A+  A    GPV +LVN AG    G   
Sbjct: 47  --IRAKGGNA------QAFACDIT-DRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFT 97

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           +         E PLW R             +I +NL G +HM  A++ GM +RG G IV 
Sbjct: 98  KT--------EPPLWER-------------LIAINLTGALHMHHAVLPGMVERGAGRIVN 136

Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
            AS AA +G  G A Y + K  L  F++ +  E  + G+T+ +  P  TDT   ++
Sbjct: 137 IASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDD 192

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 80.0 bits (198), Expect = 5e-17
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 48/226 (21%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T+ +TG SSGIG+  A   AK GA + +  R  ++L +  +E+    P            
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLP------- 54

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT--LE 217
                           + LD+S D E+I +AL+   +    + +LVN AG+AL G    +
Sbjct: 55  ----------------LQLDVS-DRESIEAALENLPEEFRDIDILVNNAGLAL-GLDPAQ 96

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           E  ++D + M                     ID N+ G +++T+ ++  M  R +G I+ 
Sbjct: 97  EADLEDWETM---------------------IDTNVKGLLNVTRLILPIMIARNQGHIIN 135

Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
             S A      G   Y ++K A++ F+  L  ++  +G+ +T   P
Sbjct: 136 LGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNIEP 181

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 79.2 bits (196), Expect = 1e-16
 Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 55/231 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A++ AK GA V I     E+   +  EE+K                  
Sbjct: 3   VTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELK--------------AYGV 48

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           KA            V  D+S D E++++ ++   +  GP+ +LVN AG+     L  M  
Sbjct: 49  KALG----------VVCDVS-DREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKE 97

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWT-VIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
           +D                      W  VID NL G  ++T+A++  M ++  G I+  +S
Sbjct: 98  ED----------------------WDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISS 135

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
               +G  G A Y +SK  + GF ++L  E+    +T+      +   PGF
Sbjct: 136 VVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITV------NAVAPGF 180

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 79.1 bits (195), Expect = 1e-16
 Identities = 54/227 (23%), Positives = 88/227 (38%), Gaps = 53/227 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG+ VA    + GA V  +      LL                          
Sbjct: 3   VTGAAQGIGRAVARHLLQAGATVIALDLPFVLLL-------------------------- 36

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                ++   +    LD++ D   +R      +   GP+  LVNCAG+   G  + ++ +
Sbjct: 37  -----EYGDPLRLTPLDVA-DAAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTE 90

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D +                         +N+ G  ++ +A+   MK R  G IV  AS A
Sbjct: 91  DWE---------------------QTFAVNVTGVFNLLQAVAPHMKDRRTGAIVTVASNA 129

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A++    +AAY +SK AL   ++ L +E+   G+   +  P  TDT 
Sbjct: 130 AHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGSTDTA 176

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 2e-16
 Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 49/228 (21%)

Query: 96  PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFI 155
                  +TG S G G+     A +RG  V   ARD   L    E+              
Sbjct: 1   MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEK-------------- 46

Query: 156 EYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT 215
            Y +  +  P          ++LD++ D   + +A++ A++  G + ++VN AG  L G 
Sbjct: 47  -YGD--RLLP----------LALDVT-DRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGM 92

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
           +EE+T  + +                       ID N +G + +T+A++  ++++  G I
Sbjct: 93  IEEVTESEARAQ---------------------IDTNFFGALWVTQAVLPYLREQRSGHI 131

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           +  +S            Y +SK+AL+G +EAL  EV + G+ +TL  P
Sbjct: 132 IQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEP 179

Length = 275

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 49/184 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG +GIGK +A   A+ GA V I  R  + L  A EEI  A                 
Sbjct: 8   ITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGR------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA-GMALCGTLEEMTM 221
                        +  D+ +D E + +A+   +   G + +L+N A G  L    E ++ 
Sbjct: 55  ----------AHPIQCDV-RDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPA-ESLS- 101

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEG-MKQRGRGCIV-ITA 279
                        G+          TVID++L GT + TKA+ +  ++ +  G I+ I+A
Sbjct: 102 -----------PNGFK---------TVIDIDLNGTFNTTKAVGKRLIEAKHGGSILNISA 141

Query: 280 SQAA 283
           + A 
Sbjct: 142 TYAY 145

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 77.8 bits (192), Expect = 4e-16
 Identities = 56/233 (24%), Positives = 89/233 (38%), Gaps = 50/233 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SGIG+ +A   A+ GA V +    E  L                         K 
Sbjct: 16  VTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR---------------LPGAKV 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTM 221
                           D++ D   +      A++R G + +LVN AG+A   G ++E+T 
Sbjct: 61  TA-----------TVADVA-DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITP 108

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG-CIVITAS 280
           +                    W     + +NL G  +  +A V  +K  G G  I+  +S
Sbjct: 109 EQ-------------------WEQ--TLAVNLNGQFYFARAAVPLLKASGHGGVIIALSS 147

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
            A  LG  G   Y +SK+A+ G  ++L +E+   G+ +   LP     P    
Sbjct: 148 VAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR 200

Length = 264

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 78.1 bits (193), Expect = 4e-16
 Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 52/227 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIGK  A   A +G  V   AR   K+                      E++  
Sbjct: 8   VTGASSGIGKATARRLAAQGYTVYGAARRVDKM----------------------EDLAS 45

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              +P        +SLD++ +  +I++A+   +   G + +LVN AG    G +E++ + 
Sbjct: 46  LGVHP--------LSLDVTDE-ASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPID 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           + +   Q                    ++NL+G   +T+ ++  M+ +  G I+  +S  
Sbjct: 97  EAR--RQ-------------------FEVNLFGAARLTQLVLPHMRAQRSGRIINISSMG 135

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
             +     A Y ++KFAL+GF++AL +EV   G+ + +  P    T 
Sbjct: 136 GKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTE 182

Length = 273

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 77.7 bits (191), Expect = 5e-16
 Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 47/248 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+SGIG     E A+RGA V +   D+  L QA   ++    +              
Sbjct: 11  ITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFD-------------- 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  V  D+    E    A + A    G V ++ + AG+ + G + EMT  
Sbjct: 57  ----------VHGVMCDVRHREEVTHLADE-AFRLLGHVDVVFSNAGIVVGGPIVEMTHD 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC-IVITASQ 281
           D                   WR W VID++L+G+IH  +A +  + ++G G  +V TAS 
Sbjct: 106 D-------------------WR-W-VIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASF 144

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
           A  +   GL AY  +K+ + G AE L  EV   G+ +++  P   +T    N E+ +   
Sbjct: 145 AGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAA 204

Query: 342 TSLISQTG 349
            +  S TG
Sbjct: 205 CAQSSTTG 212

Length = 275

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 6e-16
 Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 46/221 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SG+G+ +A+  A+ G  + +   +E+   +  + +++A  +  + R         
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQR--------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +DY  + +  Q   ++ G + ++VN AG+A  G  EE++++
Sbjct: 56  -C--------------DV-RDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLE 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W  W  I +NL G +   KA +   K++  G IV  AS A
Sbjct: 100 D-------------------WD-W-QIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMA 138

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
             +    +++Y  +K  +   +E L +E+    + + +  P
Sbjct: 139 GLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Length = 270

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 76.8 bits (190), Expect = 8e-16
 Identities = 66/244 (27%), Positives = 102/244 (41%), Gaps = 48/244 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A+  AK GA V I   +++    A E ++KA            + I  
Sbjct: 9   VTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA----------GGKAI-- 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V++D++ + E I + +  A++  G V +LVN AG+     +E+   +
Sbjct: 57  ------------GVAMDVTDE-EAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTE 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
             K M                     I + L G    TKA +  MK +G G I+  AS  
Sbjct: 104 KWKKM---------------------IAIMLDGAFLTTKAALPIMKAQGGGRIINMASVH 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN--EEKSKPR 340
             +G  G AAY S+K  L G  + + +E    G+T+    P   DTP       + +K R
Sbjct: 143 GLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKER 202

Query: 341 ETSL 344
             S 
Sbjct: 203 GISE 206

Length = 258

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 76.2 bits (188), Expect = 9e-16
 Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           T  T+ +TGG+SGIG  +A +  + G  V I  R E++L +A++E+              
Sbjct: 4   TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL-------------- 49

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                   PN      I  + LD+  D E++ +  +  +     + +L+N AG+      
Sbjct: 50  --------PN------IHTIVLDVG-DAESVEALAEALLSEYPNLDILINNAGI------ 88

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
                + I + +    L    T          ID NL G I + KA +  +K++    IV
Sbjct: 89  ----QRPIDLRDPASDLDKADTE---------IDTNLIGPIRLIKAFLPHLKKQPEATIV 135

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
             +S  A + +     Y ++K AL  +  AL  ++K +G+ +   +PP  DT   E 
Sbjct: 136 NVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVEVVEIVPPAVDTELHEE 192

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 76.3 bits (188), Expect = 1e-15
 Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 44/214 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG   AI  A+ GA + +  RD ++L    EE +++C             ++ 
Sbjct: 8   ITGSSSGIGAGTAILFARLGARLALTGRDAERL----EETRQSC-------------LQA 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                K    I  V  D++++ E     +   + + G + +LVN AG+   G  E+  ++
Sbjct: 51  GVSEKK----ILLVVADLTEE-EGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIE 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +            Y           V++LNL   I++TK  V  +  + +G IV  +S A
Sbjct: 106 E------------YD---------KVMNLNLRAVIYLTKLAVPHLI-KTKGEIVNVSSVA 143

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL 316
                 G+  Y  SK AL  F     +E+   G+
Sbjct: 144 GGRSFPGVLYYCISKAALDQFTRCTALELAPKGV 177

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 76.0 bits (187), Expect = 2e-15
 Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 47/228 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIGK +A   AK G  V +   +E+   +  +EI +A       +         
Sbjct: 5   VTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYK--------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          LD+S D + + SA+  A ++ G   ++VN AG+A    + E+T +
Sbjct: 56  ---------------LDVS-DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEE 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQ 281
           ++K                      V ++N+ G +   +A     K++G  G I+  AS 
Sbjct: 100 ELK---------------------KVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASI 138

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A + G   L+AY+S+KFA++G  +    E+   G+T+    P    TP
Sbjct: 139 AGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+ +A E A++GA + +VAR                      R    +    
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVAR----------------------RTDALQAFAA 44

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
             P     R   Y + D+  D + + +A    +   G   +++  AG++  GTL E   +
Sbjct: 45  RLPKA--ARVSVY-AADVR-DADALAAAAADFIAAHGLPDVVIANAGIS-VGTLTEER-E 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D+ V  +                  V+D N +G +   +  +  M+   RG +V  AS A
Sbjct: 99  DLAVFRE------------------VMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVA 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
              G+ G  AY++SK A   + E+L +E++ +G+ +    P    TP
Sbjct: 141 GVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTP 187

Length = 257

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 49/229 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHV--TIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           VTGG  GIG  +    AK G  V       +E+     QE+                   
Sbjct: 5   VTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQ------------------- 45

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                    + F   V       +E+ ++A+       GP+ +LVN AG+    T ++MT
Sbjct: 46  -------GALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMT 98

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            +                    W +  VID NL    ++T+ +++GM++RG G I+  +S
Sbjct: 99  YEQ-------------------WSA--VIDTNLNSVFNVTQPVIDGMRERGWGRIINISS 137

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G +G   Y+++K  + GF +AL  E    G+T+    P    T 
Sbjct: 138 VNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATD 186

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 50/222 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG + GIG  +  + AK G    I+ ARD ++   A E+++    + +F +        
Sbjct: 5   VTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQ-------- 56

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                           LD++ D  +I +A     ++ G + +LVN AG+A  G  +    
Sbjct: 57  ----------------LDVTDD-ASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPT 99

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           ++     +                   +  N +GT+ +T+AL+  +K+   G IV  +S 
Sbjct: 100 RE--QARE------------------TMKTNFFGTVDVTQALLPLLKKSPAGRIVNVSS- 138

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
              LG     AY  SK AL      L  E+K++G+ +  C P
Sbjct: 139 --GLGSLTS-AYGVSKAALNALTRILAKELKETGIKVNACCP 177

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 75.9 bits (187), Expect = 2e-15
 Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 46/228 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + GIG+ +A   A  G ++ +        L  +E  K              +EI +
Sbjct: 7   ITGAAQGIGRAIAERLAADGFNIVLAD------LNLEEAAKSTI-----------QEISE 49

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  N         V  D++ D +++ + +  A+++ G   ++VN AG+A    L  +T +
Sbjct: 50  AGYNAVA------VGADVT-DKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEE 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
           D+K                  + + V   N++G +   +A     K+ G  G I+  +S 
Sbjct: 103 DLK------------------KVYAV---NVFGVLFGIQAAARQFKKLGHGGKIINASSI 141

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A   G   L AY++SKFA++G  +    E+   G+T+    P    T 
Sbjct: 142 AGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYAPGIVKTE 189

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 78.1 bits (193), Expect = 3e-15
 Identities = 53/226 (23%), Positives = 87/226 (38%), Gaps = 62/226 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+  AI+ A+ GA V +VAR+ + L +   EI+      K      Y     
Sbjct: 376 ITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA-----KGGTAHAY----- 425

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE----- 217
                         + D++ D   +   ++  +   G V  LVN AG ++  ++E     
Sbjct: 426 --------------TCDLT-DSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDR 470

Query: 218 ----EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
               E TM                             +N +G + +   L+  M++R  G
Sbjct: 471 FHDYERTMA----------------------------VNYFGAVRLILGLLPHMRERRFG 502

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
            +V  +S          +AY +SK AL  F++    E    G+T T
Sbjct: 503 HVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFT 548

Length = 657

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 74.8 bits (184), Expect = 4e-15
 Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 50/229 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+SGIG+  A   AK GA V I   D+     A + +     +P             
Sbjct: 9   ITGGASGIGEATARLFAKHGARVVIADIDD----DAGQAVAAELGDPD------------ 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM--ALCGTLEEMT 220
                     I +V  D++ +  ++R+A+  A+ R G + ++ N AG+  A C ++ E +
Sbjct: 53  ----------ISFVHCDVTVE-ADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETS 101

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
           +++        + R             V+D+N+YG    TK     M    +G IV  AS
Sbjct: 102 LEE--------FER-------------VLDVNVYGAFLGTKHAARVMIPAKKGSIVSVAS 140

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
            A  +G  G  AYT+SK A+ G   +   E+ + G+ +    P    TP
Sbjct: 141 VAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNCVSPYGVATP 189

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 74.2 bits (183), Expect = 6e-15
 Identities = 51/231 (22%), Positives = 84/231 (36%), Gaps = 46/231 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + G+G   A   A+ GA V        +  +    ++ A                 
Sbjct: 12  VTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG---------------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        ++ D++ D  +++     A    G +  LVN AG+    +  E+ + 
Sbjct: 56  --------GRAHAIAADLA-DPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDID 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                    W               V+++N+ GT  M +A +  ++  GRG IV  AS  
Sbjct: 107 T--------WDA-------------VMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDT 145

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
           A  G   L AY +SK A+ G   +L  E+   G+T+    P  T T     
Sbjct: 146 ALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY 196

Length = 250

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 76.0 bits (188), Expect = 1e-14
 Identities = 53/200 (26%), Positives = 79/200 (39%), Gaps = 50/200 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIGK  A   A  GA V +   DE+    A  E+                   +
Sbjct: 427 VTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---------------DR 471

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A            V+ D++ D   +++A + A    G V ++V+ AG+A+ G +EE + +
Sbjct: 472 ALG----------VACDVT-DEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDE 520

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG-CIVITAS- 280
           D                   WR     D+N  G   + +  V  MK +G G  IV  AS 
Sbjct: 521 D-------------------WR--RSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASK 559

Query: 281 QAANLGIYGLAAYTSSKFAL 300
            A N G     AY ++K A 
Sbjct: 560 NAVNPGP-NFGAYGAAKAAE 578

Length = 681

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.3 bits (181), Expect = 1e-14
 Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 48/206 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIG+ +A   A  GA V +  R+E+   +   EI                   +
Sbjct: 10  VTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG---------------GR 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTM 221
           A            V+ D+S D  ++ +A+  A++R G V +LVN AG     G L ++  
Sbjct: 55  AI----------AVAADVS-DEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVD- 102

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                              A +    +  +N+      T+A V  M+  G G IV  AS 
Sbjct: 103 ------------------EAEFD--RIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAST 142

Query: 282 AANLGIYGLAAYTSSKFALKGFAEAL 307
           A      GL  Y +SK A+    +AL
Sbjct: 143 AGLRPRPGLGWYNASKGAVITLTKAL 168

Length = 251

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 52/222 (23%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
            + T+ +TG  SG G+ VA+  A++G +V    +   ++   + E  +        R + 
Sbjct: 1   MSKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR--------RGLA 52

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
               K                LD++   +    A +  +D      +L+N AG+   G +
Sbjct: 53  LRVEK----------------LDLTDAID-RAQAAEWDVD------VLLNNAGIGEAGAV 89

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
            ++ ++   V E                     + N++G + +T+  V  M  RG+G +V
Sbjct: 90  VDIPVE--LVREL-------------------FETNVFGPLELTQGFVRKMVARGKGKVV 128

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            T+S A  +      AY +SK AL+  AEA++ E+K  G+ +
Sbjct: 129 FTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQV 170

Length = 257

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 48/232 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG   GIG+ +A   A+ GA++ ++    +    A E   +                  
Sbjct: 11  ITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRG----------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                   R    V+ D+  D  ++ +A++ A ++ G + +LVN AG+   G+  +M+ +
Sbjct: 54  -------HRCTAVVA-DVR-DPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDE 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D          R +H           ID+N+ G  ++TKA++  M  R  G IV+ +S  
Sbjct: 105 D----------RDFH-----------IDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVT 143

Query: 283 ANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
            ++    G  AY  +K A+ G  ++L +E  QSG+ +    P    TP  E+
Sbjct: 144 GDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES 195

Length = 263

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 71.7 bits (176), Expect = 4e-14
 Identities = 62/284 (21%), Positives = 107/284 (37%), Gaps = 60/284 (21%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE--Y 157
              VTG S GIG+ +A+  AK GA V + A+                        IE   
Sbjct: 5   VAFVTGASRGIGRAIALRLAKAGATVVVAAK--------TASEGDNGSAKSLPGTIEETA 56

Query: 158 EEIK----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
           EEI+    +A P          + +D+  + + +R+ ++  +D+ G + +LVN AG    
Sbjct: 57  EEIEAAGGQALP----------IVVDVRDE-DQVRALVEATVDQFGRLDILVNNAGAIWL 105

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
             +E+   +   +M                       +NL GT  +++A +  M + G+G
Sbjct: 106 SLVEDTPAKRFDLM---------------------QRVNLRGTYLLSQAALPHMVKAGQG 144

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT--DTPGF 331
            I+  +   +     G  AY + K  +      L  E+++ G+ +   L P T  +TP  
Sbjct: 145 HILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAELRRHGIAVN-SLWPSTAIETPAA 203

Query: 332 EN-EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDT 374
                 S P              PE++  + L I L  P    T
Sbjct: 204 TELSGGSDPARAR---------SPEILSDAVLAI-LSRPAAERT 237

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 7e-14
 Identities = 56/235 (23%), Positives = 88/235 (37%), Gaps = 59/235 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS G+G  +A    + GA V + AR  ++L +A   ++           I+   I  
Sbjct: 17  VTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG--------IDALWIAA 68

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              +                   +I    +  ++R G V +LVN AG       E+    
Sbjct: 69  DVADE-----------------ADIERLAEETLERFGHVDILVNNAGATWGAPAEDH--- 108

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALV-EGMKQRGRGCIVITASQ 281
                  P         +  W    V++LN+ G   +++A+    M  RG G I+  AS 
Sbjct: 109 -------P---------VEAWDK--VMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASV 150

Query: 282 AANLG----IYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGF 331
           A   G    +    AY +SK A+  F  AL  E    G+ +  +        PGF
Sbjct: 151 AGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIA-------PGF 198

Length = 259

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 55/268 (20%), Positives = 99/268 (36%), Gaps = 71/268 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SGIG+  A+  A  G  V     +E  L     E+                    
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL-------------------- 45

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-----GPVYMLVNCAGMALCGTLE 217
                          LD++      R+A   A+        G + +L N AG+   G  E
Sbjct: 46  --GAGNAWTGA----LDVTD-----RAAWDAALADFAAATGGRLDVLFNNAGILRGGPFE 94

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           ++ ++    +                     ID+N+ G ++   A +  +K      ++ 
Sbjct: 95  DIPLEAHDRV---------------------IDINVKGVLNGAHAALPYLKATPGARVIN 133

Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS 337
           T+S +A  G  GLA Y+++KFA++G  EAL +E ++ G+ +   +P   DT         
Sbjct: 134 TSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA-------- 185

Query: 338 KPRETSLISQTGGLYRPEVVKQSGLTIT 365
                 ++  T         K+ G+ +T
Sbjct: 186 ------MLDGTSNEVDAGSTKRLGVRLT 207

Length = 260

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 70.1 bits (172), Expect = 1e-13
 Identities = 62/246 (25%), Positives = 100/246 (40%), Gaps = 53/246 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG  +A    + G  V IV  +E+    A +++ K                 K
Sbjct: 7   VTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG--------------GK 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A            V  D+S D + + +A++  +D  G + ++VN AG+A    +E +T +
Sbjct: 53  AIA----------VKADVS-DRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEE 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA-SQ 281
                                    V ++N+ G I   +A  E  K+ G G  +I A SQ
Sbjct: 102 QFD---------------------KVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQ 140

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN------EE 335
           A  +G   LA Y+S+KFA++G  +    ++   G+T+    P    TP   +      E 
Sbjct: 141 AGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGEN 200

Query: 336 KSKPRE 341
             KP E
Sbjct: 201 AGKPDE 206

Length = 256

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 57/229 (24%), Positives = 84/229 (36%), Gaps = 47/229 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SGIG+  A   A+ GA V +  RD +   +    I                    
Sbjct: 10  VTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAG----------------- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+    E + + +     R G + +LVN AG    GT+      
Sbjct: 53  --------GRAFARQGDVG-SAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEA 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W +  V+ +N+ G     K  +  M+++G G IV TASQ 
Sbjct: 104 D-------------------WDA--VMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQL 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
           A  G  G AAY +SK A+     A+ ++    G+ +    P   DTP F
Sbjct: 143 ALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYF 191

Length = 252

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 48/227 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG  +A     RGA + +V  +E +L     E+                    
Sbjct: 14  VTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDD---------------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                   R +  V+ D++ D   +++A + A++R G + ++V  AG+A  G++ ++   
Sbjct: 58  --------RVLTVVA-DVT-DLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQV--- 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                  P            +R   VID+NL G  H  +A +  + +R RG ++  +S A
Sbjct: 105 ------DP----------DAFR--RVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLA 145

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A     G+AAY +SK  ++ FA AL +EV   G+T+        DT 
Sbjct: 146 AFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTD 192

Length = 296

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 3e-13
 Identities = 62/228 (27%), Positives = 91/228 (39%), Gaps = 56/228 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIG+  A+  A+RGA V   AR+   L +   E                     
Sbjct: 14  VTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C         E + LD+  D     +A++ A+   G    LVNCAG+A   +  +MT +
Sbjct: 54  GC---------EPLRLDVGDD-----AAIRAALAAAGAFDGLVNCAGIASLESALDMTAE 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                               +    V+ +N  G   + + +   M   GR G IV  +SQ
Sbjct: 100 G-------------------FDR--VMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQ 138

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           AA +G+    AY +SK AL      L +E+   G+ +    P  T TP
Sbjct: 139 AALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTP 186

Length = 245

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 4e-13
 Identities = 47/211 (22%), Positives = 71/211 (33%), Gaps = 49/211 (23%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
               + +TG S GIG   A   A  G H+ +VARD   L     +++ A           
Sbjct: 6   AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVD------- 58

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                           +   +LD+S        A +      G + +LVN AG    G L
Sbjct: 59  ----------------VAVHALDLSSP-----EAREQLAAEAGDIDILVNNAGAIPGGGL 97

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           +++            W  G+             +L ++G I +T+     MK RG G IV
Sbjct: 98  DDVDDAA--------WRAGW-------------ELKVFGYIDLTRLAYPRMKARGSGVIV 136

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
                A           ++   AL  F  AL
Sbjct: 137 NVIGAAGENPDADYICGSAGNAALMAFTRAL 167

Length = 259

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 68.7 bits (168), Expect = 4e-13
 Identities = 59/233 (25%), Positives = 89/233 (38%), Gaps = 55/233 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SGIG+ +AI  A+ GA V +        L    E                     
Sbjct: 13  VTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAE--------------------- 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC----GPVYMLVNCAGMALCGTLEE 218
                  I      ++ I+ D  + ++ L+ A+ R     G + + VN AG+A     EE
Sbjct: 52  ------HIEAAGRRAIQIAADVTS-KADLRAAVARTEAELGALTLAVNAAGIANANPAEE 104

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           M  +                    W+  TV+D+NL G     +A    M + G G IV  
Sbjct: 105 MEEEQ-------------------WQ--TVMDINLTGVFLSCQAEARAMLENGGGSIVNI 143

Query: 279 ASQAANLGIYGL--AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           AS +  +   GL  A Y +SK  +   +++L ME    G+ +    P  T TP
Sbjct: 144 ASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATP 196

Length = 254

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 5e-13
 Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 50/190 (26%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
            + +TGGSSG+GK +A   A+ GA+V I  R ++KL +A+ EI++               
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ--------------- 47

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVN-CAGMALCGTLEE 218
                    F   +  V +D+ ++ E+++  ++   ++ G +  L+N  AG  +C   + 
Sbjct: 48  ---------FPGQVLTVQMDV-RNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAED- 96

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIV- 276
                       L + G       W S  VID+ L GT + ++A+ +   ++G +G I+ 
Sbjct: 97  ------------LSVNG-------WNS--VIDIVLNGTFYCSQAVGKYWIEKGIKGNIIN 135

Query: 277 ITASQAANLG 286
           + A+ A + G
Sbjct: 136 MVATYAWDAG 145

Length = 252

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.7 bits (166), Expect = 8e-13
 Identities = 59/237 (24%), Positives = 86/237 (36%), Gaps = 68/237 (28%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
              T+ +TG +SGIG   A     +GA V  V + +K  L                    
Sbjct: 4   MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGN----------------- 46

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                             ++ LD+S D E       P  D    V +L N AG+      
Sbjct: 47  ----------------FHFLQLDLSDDLE-------PLFDWVPSVDILCNTAGI------ 77

Query: 217 EEMTMQDIKVMEQPLWLRGYH----TRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR 272
                           L  Y     T L  W+   + D NL  T  +T+A +  M +R  
Sbjct: 78  ----------------LDDYKPLLDTSLEEWQH--IFDTNLTSTFLLTRAYLPQMLERKS 119

Query: 273 GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           G I+   S A+ +   G AAYT+SK AL GF + L ++  + G+ +    P    TP
Sbjct: 120 GIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTP 176

Length = 235

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 8e-13
 Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 44/208 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG  +A   A+ GA V +   D     +A   I +     +            
Sbjct: 12  VTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGAR------------ 59

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  V  D++ D  ++ +A+  A +  GP+ +LVN AG             
Sbjct: 60  ----------VLAVPADVT-DAASVAAAVAAAEEAFGPLDVLVNNAG------------- 95

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            I V   PL           WR      ++L G  +  +A++ GM +RGRG IV  AS  
Sbjct: 96  -INVFADPL-----AMTDEDWRR--CFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTH 147

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYME 310
           A   I G   Y  +K  L G   AL +E
Sbjct: 148 AFKIIPGCFPYPVAKHGLLGLTRALGIE 175

Length = 260

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 57/236 (24%), Positives = 88/236 (37%), Gaps = 49/236 (20%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           T  T  VTG + GIG+ +A      G  V  +  D      A      A  + +F+    
Sbjct: 1   TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDA----AALAAFADALGDARFVP--- 53

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                              V+ D++ D  ++ +AL  A    GPV +LV  AG A   +L
Sbjct: 54  -------------------VACDLT-DAASLAAALANAAAERGPVDVLVANAGAARAASL 93

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
            + T                    A WR      LNL       +A++EGM +R RG +V
Sbjct: 94  HDTTP-------------------ASWR--ADNALNLEAAYLCVEAVLEGMLKRSRGAVV 132

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
              S    +   G  AY+++K  L  + + L +E  + G+      P    T  +E
Sbjct: 133 NIGS-VNGMAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE 187

Length = 257

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 66.3 bits (162), Expect = 2e-12
 Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 49/228 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SGIG+  A+  A+ G  V +   DE  L     E+                    
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAEN---------------- 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSAL-QPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                     +   +LD++ D     +AL   A    G +  L N AG+   G  E++ +
Sbjct: 49  ----------VVAGALDVT-DRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPL 97

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                M                     +D+N+ G ++   A +  +K      ++ TAS 
Sbjct: 98  AAHDRM---------------------VDINVKGVLNGAYAALPYLKATPGARVINTASS 136

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           +A  G   LA Y+++KFA++G  EAL +E  + G+ +    P   DTP
Sbjct: 137 SAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVDTP 184

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 66.6 bits (162), Expect = 2e-12
 Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 55/231 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC-PN-PKFIRFIEYEEI 160
           VTGG  GIG  +     K G    +VA                C PN P+ ++++E +  
Sbjct: 8   VTGGMGGIGTSICQRLHKDG--FKVVA---------------GCGPNSPRRVKWLEDQ-- 48

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                  K + F    S     D+++ ++A        G + +LVN AG+       +MT
Sbjct: 49  -------KALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMT 101

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            +D                   W +  VID NL    ++TK +++GM +RG G I+  +S
Sbjct: 102 RED-------------------WTA--VIDTNLTSLFNVTKQVIDGMVERGWGRIINISS 140

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
                G +G   Y+++K  + GF  +L  EV   G+T+      +T +PG+
Sbjct: 141 VNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTV------NTVSPGY 185

Length = 246

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 66.4 bits (162), Expect = 4e-12
 Identities = 66/243 (27%), Positives = 94/243 (38%), Gaps = 60/243 (24%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTGG SGIGK VA      GA V IV R+  KL  A EEI+                
Sbjct: 9   TYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGA--------- 59

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                        + Y   D++ + +  R A+  A    G ++ +V+CAG +   T+  +
Sbjct: 60  -------------VRYEPADVTDEDQVAR-AVDAATAWHGRLHGVVHCAGGSE--TIGPI 103

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI----HMTKALVEGMKQRGRGCI 275
           T  D                   WR    +DLN+ GT+    H  + LV G    G G  
Sbjct: 104 TQIDS----------------DAWRR--TVDLNVNGTMYVLKHAARELVRG----GGGSF 141

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQS---------GLTITLCLPPDT 326
           V  +S AA+       AY  +K A+    +    E+  S         GL  T  + P T
Sbjct: 142 VGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPIT 201

Query: 327 DTP 329
           ++P
Sbjct: 202 ESP 204

Length = 276

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 65.9 bits (161), Expect = 4e-12
 Identities = 56/258 (21%), Positives = 96/258 (37%), Gaps = 53/258 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A   A  GA++ +             EI+           +  +   K
Sbjct: 7   VTGSTSGIGLGIARALAAAGANIVLNG------FGDAAEIEAVRAG------LAAKHGVK 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y   D+SK    I   +  A  + G V +LVN AG+     +E+   +
Sbjct: 55  VL----------YHGADLSKPAA-IEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTE 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                  W  +I LNL    H T+  +  MK++G G I+  AS 
Sbjct: 104 ----------------------KWDAIIALNLSAVFHTTRLALPHMKKQGWGRIINIASV 141

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
              +     +AY ++K  + G  + + +E   +G+T     P    TP  E        +
Sbjct: 142 HGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNAICPGWVLTPLVEK-------Q 194

Query: 342 TSLISQTGGLYRPEVVKQ 359
            S ++Q  G+ + +  ++
Sbjct: 195 ISALAQKNGVPQEQAARE 212

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 65.4 bits (160), Expect = 5e-12
 Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 48/220 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK- 161
           VTG   G+G+  A+  A+RGA V  V  D     +   +   A            +EIK 
Sbjct: 10  VTGAGGGLGRAYALAFAERGAKV--VVNDLGGDRKGSGKSSSAA-------DKVVDEIKA 60

Query: 162 ---KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE 218
              KA  N                  E+    ++ A+D  G V +LVN AG+    +  +
Sbjct: 61  AGGKAVAN--------------YDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAK 106

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           M+ +D                   W    V+ ++L G+  +T+A    M+++  G I+ T
Sbjct: 107 MSEED-------------------WDL--VMRVHLKGSFKVTRAAWPYMRKQKFGRIINT 145

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           +S A   G +G A Y+++K  L G +  L +E  +  +T 
Sbjct: 146 SSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEGAKYNITC 185

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 65.2 bits (159), Expect = 8e-12
 Identities = 52/239 (21%), Positives = 94/239 (39%), Gaps = 47/239 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG++GIG+  A+  A+ GA V +  RD     +    I++A     F+          
Sbjct: 12  VTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVA--------- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTM 221
                           D+++D E +++ ++  +   G +    N AG+ +  G L E + 
Sbjct: 63  ---------------CDVTRDAE-VKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSE 106

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            +                        ++ +N+ G     K  +  M  +G G IV TAS 
Sbjct: 107 AEFD---------------------AIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASV 145

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR 340
           A       ++ Y +SK A+ G  ++  +E  + G+ +    P   DT  F    ++ PR
Sbjct: 146 AGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPR 204

Length = 253

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 64.4 bits (157), Expect = 9e-12
 Identities = 47/238 (19%), Positives = 90/238 (37%), Gaps = 56/238 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +T  + GIG+ +A+  A+ GA+V     +E+KL +                     E   
Sbjct: 7   ITAAAQGIGRAIALAFAREGANVIATDINEEKLKEL--------------------ERGP 46

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          LD++      +  +       G + +L NCAG    G++ +    
Sbjct: 47  GITT---------RVLDVTD-----KEQVAALAKEEGRIDVLFNCAGFVHHGSILDCEDD 92

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D            +            ++LN+     M KA++  M  R  G I+  +S A
Sbjct: 93  D----------WDFA-----------MNLNVRSMYLMIKAVLPKMLARKDGSIINMSSVA 131

Query: 283 ANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
           +++ G+     Y+++K A+ G  +++  +  Q G+      P   DTP  E   +++P
Sbjct: 132 SSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPGTVDTPSLEERIQAQP 189

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 64.6 bits (158), Expect = 9e-12
 Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 55/231 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAH--VTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           +TG S GIG+ +A E  KRG+   V ++AR E+ L + +EE+    P  +          
Sbjct: 4   LTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEEL---RPGLRV--------- 51

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                          V  D+S     +   L+      G   +L+N AG    G + ++ 
Sbjct: 52  -------------TTVKADLSDA-AGVEQLLEAIRKLDGERDLLINNAGSL--GPVSKIE 95

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITA 279
             D   +++    + +              LNL   + +T  L+   K+RG +  +V  +
Sbjct: 96  FID---LDE--LQKYFD-------------LNLTSPVCLTSTLLRAFKKRGLKKTVVNVS 137

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP---DTD 327
           S AA     G   Y SSK A   F   L  E         L   P   DTD
Sbjct: 138 SGAAVNPFKGWGLYCSSKAARDMFFRVLAAEEPD---VRVLSYAPGVVDTD 185

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 52/233 (22%), Positives = 87/233 (37%), Gaps = 53/233 (22%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
            + T+ VTG + GIGK         GA         KK+  A  +   A           
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGA---------KKVYAAVRDPGSA----------- 41

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGT 215
              + K          +  + LD++ D E+I++A   A D    V +++N AG+      
Sbjct: 42  AHLVAKYGDK------VVPLRLDVT-DPESIKAAAAQAKD----VDVVINNAGVLKPATL 90

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
           LEE  ++ +K                       +D+N++G + + +A    +K  G G I
Sbjct: 91  LEEGALEALKQ---------------------EMDVNVFGLLRLAQAFAPVLKANGGGAI 129

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           V   S A+      +  Y++SK A     + L  E+   G  +    P   DT
Sbjct: 130 VNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSVHPGPIDT 182

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 67/253 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG  +A E A     + +  R  ++L +   E+  A P P             
Sbjct: 8   ITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAAELPGATPFP------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +D++ D E I +A++      G + +LV+ AG+A  G + E T+ 
Sbjct: 54  ---------------VDLT-DPEAIAAAVEQL----GRLDVLVHNAGVADLGPVAESTVD 93

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR+   +++N+     +T+ L+  + +   G +V   S A
Sbjct: 94  E-------------------WRA--TLEVNVVAPAELTRLLLPAL-RAAHGHVVFINSGA 131

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
                 G  +Y +SKFAL+  A+AL  E +   + +T   P  TDT            + 
Sbjct: 132 GLRANPGWGSYAASKFALRALADALREE-EPGNVRVTSVHPGRTDT----------DMQR 180

Query: 343 SLISQTGGLYRPE 355
            L++Q GG Y PE
Sbjct: 181 GLVAQEGGEYDPE 193

Length = 227

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 49/240 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG+ VAI  A+ GA V I    E++     EE KK             EE  +
Sbjct: 31  ITGGDSGIGRAVAIAFAREGADVAINYLPEEE--DDAEETKKLI-----------EEEGR 77

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C     +     +  D+  +    R  ++  +   G + +LVN A         +   +
Sbjct: 78  KC----LL-----IPGDLGDE-SFCRDLVKEVVKEFGKLDILVNNAA-------YQHPQE 120

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            I+ +      + + T             N++   ++TKA +  +K+     I+ T S  
Sbjct: 121 SIEDITTEQLEKTFRT-------------NIFSMFYLTKAALPHLKKGSS--IINTTSVT 165

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP----GFENEEKSK 338
           A  G   L  Y ++K A+  F   L +++ + G+ +    P    TP     F  E+ S+
Sbjct: 166 AYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGPIWTPLIPSSFPEEKVSE 225

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  +A   A+ GA V +  RD  KL  A E +K    +   + F        
Sbjct: 15  VTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAF-------- 66

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D++ D++ +R+A+       GP+ +LVN AGM     LE+    
Sbjct: 67  ----------------DVT-DHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPAD 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                    + R   T             N+    ++ +A+   M  RG G I+  AS  
Sbjct: 110 A--------FERLLRT-------------NISSVFYVGQAVARHMIARGAGKIINIASVQ 148

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           + L   G+A YT++K A+    + +  +  + GL      P   DTP
Sbjct: 149 SALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTP 195

Length = 255

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 50/215 (23%), Positives = 81/215 (37%), Gaps = 46/215 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + G+G  +A   A  GAHV +  R+   L  A   ++ A                 
Sbjct: 16  VTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG--------------GA 61

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A          E ++ DI+ D E + +A        G + +LVN  G      L E+   
Sbjct: 62  A----------EALAFDIA-DEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDA 110

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            I+ +                     ++ +L   I +++   + MK++G G I+   S A
Sbjct: 111 AIRAL---------------------LETDLVAPILLSRLAAQRMKRQGYGRIIAITSIA 149

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
             +   G A Y ++K  L G   AL  E    G+T
Sbjct: 150 GQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGIT 184

Length = 256

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 58/255 (22%), Positives = 89/255 (34%), Gaps = 50/255 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   A+ GA V +     K    A EE+            IE    K 
Sbjct: 8   VTGASRGIGRAIAKRLARDGASVVVNYASSKA---AAEEVVAE---------IEAAGGKA 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+S     +      A    G V +LVN AG+ L   + E + +
Sbjct: 56  IA-----------VQADVSDP-SQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEE 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +        + R             +  +N  G   + +   + ++  GR  I+  +S  
Sbjct: 104 E--------FDR-------------MFTVNTKGAFFVLQEAAKRLRDGGR--IINISSSL 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
                    AY  SK A++ F   L  E+   G+T+    P   DT  F    K++    
Sbjct: 141 TAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVAPGPVDTDMFY-AGKTEEAVE 199

Query: 343 SLISQT--GGLYRPE 355
                +  G L  PE
Sbjct: 200 GYAKMSPLGRLGEPE 214

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 22/153 (14%)

Query: 176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRG 235
           + LD++ D   +R+ +  A    G + ++V+ AG  L G  EE++  D ++  Q      
Sbjct: 53  LQLDVT-DSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELS--DAQIRRQ------ 103

Query: 236 YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTS 295
                        ID NL G+I + +A +  ++++G G IV  +S+   +   G + Y +
Sbjct: 104 -------------IDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHA 150

Query: 296 SKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           +K+ ++GF EA+  EV   G+  T+  P    T
Sbjct: 151 TKWGIEGFVEAVAQEVAPFGIEFTIVEPGPART 183

Length = 276

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 60/249 (24%), Positives = 99/249 (39%), Gaps = 49/249 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VT  + GIG  +A   A+ GAHV + +R ++ + +A   ++                   
Sbjct: 15  VTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE----------GLSVTGT 64

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLV-NCAGMALCGTLEEMTM 221
            C             +  ++D E +   +  A++  G V +LV N A     G + + T 
Sbjct: 65  VC------------HVGKAEDRERL---VATAVNLHGGVDILVSNAAVNPFFGNILDST- 108

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                  + +W +             ++D+N+  T  MTKA+V  M++RG G +VI +S 
Sbjct: 109 -------EEVWDK-------------ILDVNVKATALMTKAVVPEMEKRGGGSVVIVSSV 148

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE-EKSKPR 340
           AA     GL  Y  SK AL G  + L  E+    + +  CL P      F +     K  
Sbjct: 149 AAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNIRVN-CLAPGLIKTSFSSALWMDKAV 207

Query: 341 ETSLISQTG 349
           E S+     
Sbjct: 208 EESMKETLR 216

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 63.7 bits (155), Expect = 2e-11
 Identities = 65/261 (24%), Positives = 97/261 (37%), Gaps = 57/261 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  +GIG   A   A+ GA V +   D      AQ  + +          I    +  
Sbjct: 8   VTGAGAGIGAACAARLAREGARVVVADID---GGAAQAVVAQ----------IAGGAL-- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
           A              +D++ D + + +  + A++  G + +LVN AG M L   + +   
Sbjct: 53  ALR------------VDVT-DEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIID--- 96

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                           T LA+W     + +NL GT    +     M  RG G IV  +S 
Sbjct: 97  ----------------TDLAVWDQ--TMAINLRGTFLCCRHAAPRMIARGGGSIVNLSSI 138

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP-------GFENE 334
           A   G  G  AY +SK A++     L  E++ +G+      P   DTP       GFE  
Sbjct: 139 AGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPGLIDTPLLLAKLAGFEGA 198

Query: 335 EKSKPRETSLISQTGGLYRPE 355
                    +    G L RPE
Sbjct: 199 LGPGGFHLLIHQLQGRLGRPE 219

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 48/209 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V+G   G+G+ +A+ AA+ GA V + AR  ++L +   EI                    
Sbjct: 10  VSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG---------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA-GMALCGTLEEMTM 221
                   R    V  DI+ D +   + +  A++R G V  LVN A  +     L +   
Sbjct: 54  --------RRALAVPTDIT-DEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADF 104

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                WR+  VI+LN+ GT+ +T+A    + + G G IV+  S 
Sbjct: 105 AH-------------------WRA--VIELNVLGTLRLTQAFTPALAESG-GSIVMINSM 142

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME 310
                     AY  +K AL   +++L  E
Sbjct: 143 VLRHSQPKYGAYKMAKGALLAASQSLATE 171

Length = 258

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 63.5 bits (155), Expect = 3e-11
 Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 51/244 (20%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
              VTGGS GIG  +A   A+ GA V I+     +  +  EE+ K           +Y  
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAK-----------KYGV 58

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
             KA               D+S   E++    +      G + +L+  AG+ +     + 
Sbjct: 59  KTKAY------------KCDVS-SQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDY 105

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           T +                         VID+NL G  +  +A  +  K++G+G ++ITA
Sbjct: 106 TYEQWN---------------------KVIDVNLNGVFNCAQAAAKIFKKQGKGSLIITA 144

Query: 280 SQAANLGIYGL--AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP---DTDTPGFENE 334
           S +  +       AAY +SK A+   A++L +E  +  + +   + P   DTD   F ++
Sbjct: 145 SMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVN-SISPGYIDTDLTDFVDK 203

Query: 335 EKSK 338
           E  K
Sbjct: 204 ELRK 207

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 62.6 bits (153), Expect = 4e-11
 Identities = 55/222 (24%), Positives = 86/222 (38%), Gaps = 48/222 (21%)

Query: 98  NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC-PNPKFIRFIE 156
           +  + VTG   GIG+  A+  A+ GA V ++ R E+KL    +EI+ A  P P  I    
Sbjct: 12  DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL-- 69

Query: 157 YEEIKKACPNPKFIRFIEYVSL--DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG 214
             ++  A P         Y  L   I + +  +   L  A                 L G
Sbjct: 70  --DLLTATPQ-------NYQQLADTIEEQFGRLDGVLHNA----------------GLLG 104

Query: 215 TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC 274
            L  M  QD +V +                   V+ +N+  T  +T+AL+  + +     
Sbjct: 105 ELGPMEQQDPEVWQD------------------VMQVNVNATFMLTQALLPLLLKSPAAS 146

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL 316
           +V T+S     G     AY  SKFA +G  + L  E + + L
Sbjct: 147 LVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNL 188

Length = 247

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 4e-11
 Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 46/226 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V G SSGIG   AIE A  G  V + AR  +K    +E + K       IR    E +  
Sbjct: 15  VAGASSGIGAATAIELAAAGFPVALGARRVEKC---EELVDK-------IRADGGEAVA- 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          LD++ D ++++S +  A +  G + +LV+ AG    G L E++ +
Sbjct: 64  -------------FPLDVT-DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTE 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
             +   Q                   + ++L G   +  A++ GM +R RG ++   S  
Sbjct: 110 QFE--SQ-------------------VQIHLVGANRLATAVLPGMIERRRGDLIFVGSDV 148

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           A      + AY ++K  L+     L ME++ +G+  ++  P  T T
Sbjct: 149 ALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLT 194

Length = 274

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 63.0 bits (153), Expect = 5e-11
 Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 47/228 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIGK +A+E A+ GA V I   ++       +EI KA                 
Sbjct: 12  VTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA----------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                K I     V++D++ +   + + +    +R G V +LV+ AG+ +   +E  +  
Sbjct: 55  ---GGKAI----GVAMDVTNEDA-VNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFA 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI-TASQ 281
           D K M                       +++ G    TKA ++ M +  RG +VI   S 
Sbjct: 107 DWKKM---------------------QAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSV 145

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
            ++      +AY ++K  L G A  L  E  +  +   +  P    TP
Sbjct: 146 HSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTP 193

Length = 262

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 62.4 bits (152), Expect = 5e-11
 Identities = 64/241 (26%), Positives = 100/241 (41%), Gaps = 50/241 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIGK +AI  A  GA+V +  R ++    A EE+               EEIK 
Sbjct: 8   VTGASSGIGKAIAIRLATAGANVVVNYRSKE---DAAEEVV--------------EEIKA 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+SK+ E++ +  Q A+   G + +LVN AG+    +  EMT++
Sbjct: 51  VGGKAIA------VQADVSKE-EDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLE 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTK-ALVEGMKQRGRGCIVITASQ 281
           D                   W    VID+NL G     + A+    K + +G I+  +S 
Sbjct: 104 D-------------------WN--KVIDVNLTGQFLCAREAIKRFRKSKIKGKIINMSSV 142

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP----GFENEEKS 337
              +   G   Y +SK  +K   + L  E    G+ +    P   +TP     +++ E+ 
Sbjct: 143 HEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNAIAPGAINTPINAEAWDDPEQR 202

Query: 338 K 338
            
Sbjct: 203 A 203

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 6e-11
 Identities = 66/275 (24%), Positives = 100/275 (36%), Gaps = 58/275 (21%)

Query: 60  KNFKSSEPRTNLEPPC--RGVRTVASREPH-LQMKRYLAPTNGTLSVTGGSSGIGKHVAI 116
           +          + PP   + +     R+P  L  KR L        +TG SSGIG+  A 
Sbjct: 7   RRLTDQLTLAGMRPPISPQLLINRPPRQPVDLTGKRIL--------LTGASSGIGEAAAE 58

Query: 117 EAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV 176
           + A+RGA V  VAR E  L    + I +A  +   +           C            
Sbjct: 59  QFARRGATVVAVARREDLLDAVADRITRAGGDAMAV----------PC------------ 96

Query: 177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGY 236
             D+S D + + + +     R G V +L+N AG ++   L E                  
Sbjct: 97  --DLS-DLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAE------------------ 135

Query: 237 HTRLALWRSWT-VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL-AAYT 294
              L  W      + LN Y  + + + L  GM +RG G I+  A+         L + Y 
Sbjct: 136 --SLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYN 193

Query: 295 SSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           +SK AL   +  +  E    G+  T    P   TP
Sbjct: 194 ASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP 228

Length = 293

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 62.7 bits (153), Expect = 6e-11
 Identities = 51/224 (22%), Positives = 79/224 (35%), Gaps = 52/224 (23%)

Query: 98  NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY 157
                +TG +SG G   A   A  G  + +    +  L +A  E++              
Sbjct: 6   GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG----------- 54

Query: 158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
                          +  V  D+S D   + +    A++R G V++L N AG+   G + 
Sbjct: 55  ------------AEVLG-VRTDVS-DAAQVEALADAALERFGAVHLLFNNAGVGAGGLVW 100

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG------ 271
           E ++ D                   W  W V+ +NL+G IH  +A    M          
Sbjct: 101 ENSLAD-------------------WE-W-VLGVNLWGVIHGVRAFTPLMLAAAEKDPAY 139

Query: 272 RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSG 315
            G IV TAS A  L    +  Y  SK A+    E LY ++    
Sbjct: 140 EGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVT 183

Length = 287

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 9e-11
 Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 48/239 (20%)

Query: 95  APTNGTLSV-TGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIR 153
            P +G + V TG SSGIG+  A   A+RGA + + ARDE    +A + + + C       
Sbjct: 3   GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDE----EALQAVAEEC------- 51

Query: 154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
                   +A      +     V  D+  D + +++    A    G + + VN  G+   
Sbjct: 52  --------RALGAEVLV-----VPTDV-TDADQVKALATQAASFGGRIDVWVNNVGVGAV 97

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
           G  EE  ++     EQ                  VI  NL G +    A +   K++G G
Sbjct: 98  GRFEETPIE---AHEQ------------------VIQTNLIGYMRDAHAALPIFKKQGHG 136

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEV-KQSGLTITLCLPPDTDTPGF 331
             +   S          AAY++SKF L+GF+EAL  E+     + +    P   DTPGF
Sbjct: 137 IFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGF 195

Length = 330

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 63.5 bits (155), Expect = 1e-10
 Identities = 68/256 (26%), Positives = 104/256 (40%), Gaps = 57/256 (22%)

Query: 82  ASRE-PHLQMKRYLAPTNGTL-SVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ 139
            +R     ++ R   P +G L  VTG  SGIG+  A+  A+ GA V     DE    +  
Sbjct: 297 PARALLRARVGRPRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTA 356

Query: 140 EEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCG 199
           E I+ A                 A           Y  +D+S D + + +  +      G
Sbjct: 357 ELIRAAGA--------------VAHA---------YR-VDVS-DADAMEAFAEWVRAEHG 391

Query: 200 PVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM 259
              ++VN AG+ + G   + + +D        W R             V+D+NL+G IH 
Sbjct: 392 VPDIVVNNAGIGMAGGFLDTSAED--------WDR-------------VLDVNLWGVIHG 430

Query: 260 TKALVEGMKQRGR-GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            +     M +RG  G IV  AS AA      L AY +SK A+   +E L  E+  +G+ +
Sbjct: 431 CRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGV 490

Query: 319 T-LCLPPDTDTPGFEN 333
           T +C       PGF +
Sbjct: 491 TAIC-------PGFVD 499

Length = 582

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 59/230 (25%), Positives = 88/230 (38%), Gaps = 50/230 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+  A   A+ GA V + AR + +L Q   EI+                   
Sbjct: 11  ITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVA----------- 59

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSAL-QPAMDRCGPVYMLVNCAGM-ALCGTLEEMT 220
                        ++ D+    E    AL   A++R G + +  N AG     G + EM+
Sbjct: 60  -------------LAGDVRD--EAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMS 104

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
           ++                    WR    +  NL       K  +  M  RG G ++ T++
Sbjct: 105 LEG-------------------WRE--TLATNLTSAFLGAKHQIPAMLARGGGSLIFTST 143

Query: 281 QAA-NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                 G  G+AAY +SK  L G  + L  E    G+ +   LP  TDTP
Sbjct: 144 FVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193

Length = 254

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 55/241 (22%), Positives = 87/241 (36%), Gaps = 51/241 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIGK +A+  A+RGA V I  R  K                     IE    K 
Sbjct: 3   VTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAE------------IEELGGK- 49

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+S   +++        +R G + +LV+ A       L E+T  
Sbjct: 50  ----------AVVVRADVS-QPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPA 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W    + + NL   +H  +   + M++RG G IV  +S  
Sbjct: 99  H-------------------WD-AKM-NTNLKALVHCAQQAAKLMRERGGGRIVAISSLG 137

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT------PGFENEEK 336
           +   +    A  ++K AL+     L +E+   G+ +    P   DT      P  E+  +
Sbjct: 138 SIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPGVIDTDALAHFPNREDLLE 197

Query: 337 S 337
           +
Sbjct: 198 A 198

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 31/188 (16%)

Query: 176 VSLDISKDYENIRSALQPAMDRCGP--VYMLVNCAGMALCGTLEE-MTMQDIKVMEQPLW 232
           + LD++K  E I+ A Q   +  G   ++ LVN AG+   G  EE + M D +       
Sbjct: 53  LQLDVTKP-EQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYR------- 104

Query: 233 LRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAA 292
                           +++NL+GT+ +TKA +  + +R +G +V  +S    +      A
Sbjct: 105 --------------KCMEVNLFGTVEVTKAFLP-LLRRAKGRVVNVSSMGGRVPFPAGGA 149

Query: 293 YTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLY 352
           Y +SK A++ F+++L  E++  G+ +++  P +  T    N E  + +   L  +     
Sbjct: 150 YCASKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTGITGNSELWEKQAKKLWERL---- 205

Query: 353 RPEVVKQS 360
            P  VK+ 
Sbjct: 206 -PPEVKKD 212

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 58/227 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIGK V     + G++V      E                              
Sbjct: 11  VTGGSQGIGKAVVNRLKEEGSNVINFDIKEP------SYND------------------- 45

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     ++Y  +D+S   E +   +   + + G + +LVN AG+   G +  +   
Sbjct: 46  ----------VDYFKVDVSNK-EQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEED 94

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   W    +I++N+ G   M+K  +  M ++ +G I+  AS  
Sbjct: 95  E-------------------WDR--IINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQ 133

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           +       AAY +SK A+ G   ++ ++   +   + +C P    TP
Sbjct: 134 SFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVC-PGSIRTP 179

Length = 258

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 22/154 (14%)

Query: 182 KDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLA 241
           +D   +R+ ++  +++ G + ++V  AG+   G   E++       EQ            
Sbjct: 75  RDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSE------EQ------------ 116

Query: 242 LWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG-CIVITASQAANLGIYGLAAYTSSKFAL 300
            W   TV+D+NL G     KA+V  M +RG G  I+IT+S A    + GLA Y ++K  L
Sbjct: 117 -WD--TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGL 173

Query: 301 KGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
            G  + L  E+ + G+ +    P   DTP    E
Sbjct: 174 VGLTKTLANELAEYGIRVNSIHPYSVDTPMIAPE 207

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 50/236 (21%), Positives = 92/236 (38%), Gaps = 65/236 (27%)

Query: 95  APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRF 154
                ++ +TG SSGIG + A      G  V    R E+ +   + E             
Sbjct: 1   MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE------------- 47

Query: 155 IEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALC 213
                             +E   LD + + E+I + +   ++   G +  L N       
Sbjct: 48  -----------------GLEAFQLDYA-EPESIAALVAQVLELSGGRLDALFNNGAYGQP 89

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
           G +E++  + ++   Q                    + N +G   +T+ ++  M+++G+G
Sbjct: 90  GAVEDLPTEALR--AQ-------------------FEANFFGWHDLTRRVIPVMRKQGQG 128

Query: 274 CIVITASQAANLGIYGLA------AYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            IV  +S      I GL       AY +SKFA++G +  L ME++ SG+ ++L  P
Sbjct: 129 RIVQCSS------ILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEP 178

Length = 277

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 63/273 (23%), Positives = 103/273 (37%), Gaps = 56/273 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG  +A E    GA V IVARD   L QA++E+ +  P               
Sbjct: 14  ITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPE-------------- 59

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                   R +  ++ D+S D E+ R+ L    D    +++LVN AG  +     + T  
Sbjct: 60  --------REVHGLAADVSDD-EDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTED 110

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   + + NL+    +++     +KQ     IV   S +
Sbjct: 111 E-------------------WRG--IFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVS 149

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE----NEEKSK 338
               +   A Y  +K AL      L +E  + G+ +    P    TP       + +  +
Sbjct: 150 GLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYE 209

Query: 339 PRETSLISQT--GGLYRPEVVKQSGLTITLCLP 369
                +I +T    +  PE V  +     LC+P
Sbjct: 210 Q----VIERTPMRRVGEPEEV--AAAVAFLCMP 236

Length = 257

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 47/216 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG++G+G+  A+  AK GA + I            +E +         R IE E    
Sbjct: 20  VTGGNTGLGQGYAVALAKAGADIIITTHGTN-----WDETR---------RLIEKEG--- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                   R + +V +D++K  E+    ++ A++  G + +LVN AG      L E   +
Sbjct: 63  --------RKVTFVQVDLTKP-ESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDE 113

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W    V+D+NL    H+++A+ + M ++G G I+  AS  
Sbjct: 114 D-------------------WN--AVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASML 152

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           +  G   + AYT+SK  + G  +A   E+    + +
Sbjct: 153 SFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQV 188

Length = 258

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 59.9 bits (146), Expect = 4e-10
 Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 39/218 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG   +G  +A E A+ GA V I+ R+++K      EIK A                 
Sbjct: 15  ITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALA----------- 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+  D E++  A Q  ++  GP  +L+N AG    G   + T  
Sbjct: 64  -------------VKADVL-DKESLEQARQQILEDFGPCDILINGAG----GNHPKATTD 105

Query: 223 DIKVMEQPLWLRGYHTRLAL----WRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           +    E    +    T   L    +    V DLNL GT+  T+   + M  R  G I+  
Sbjct: 106 N----EFHELIEPTKTFFDLDEEGFEF--VFDLNLLGTLLPTQVFAKDMVGRKGGNIINI 159

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL 316
           +S  A   +  + AY+++K A+  F + L +   + G+
Sbjct: 160 SSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGI 197

Length = 278

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 69/289 (23%), Positives = 110/289 (38%), Gaps = 68/289 (23%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           ++ +TG SSGIG   A+E  +RG  V    R    + +                      
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS------------------- 44

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEE 218
                           + LD+  D E++  A    +      +Y L N AG  + G L  
Sbjct: 45  -----------LGFTGILLDLD-DPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLST 92

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           ++ Q    MEQ                      N +GT  +T  L+  M   G G IV+T
Sbjct: 93  ISRQQ---MEQQF------------------STNFFGTHQLTMLLLPAMLPHGEGRIVMT 131

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK 338
           +S    +   G  AY +SK+AL+ +++AL ME++ SG+ ++L  P    T          
Sbjct: 132 SSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRT---------- 181

Query: 339 PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENE-EKSKPR 386
            R T  ++QT      + V+  G+     L P+   P   +  E  KP+
Sbjct: 182 -RFTDNVNQT---QSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPK 226

Length = 256

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 59.1 bits (144), Expect = 5e-10
 Identities = 55/244 (22%), Positives = 88/244 (36%), Gaps = 63/244 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG + GIG+    +   RGA  V   ARD        E +    P              
Sbjct: 11  VTGANRGIGRAFVEQLLARGAAKVYAAARDP-------ESVTDLGP-------------- 49

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-LEEMT 220
           +  P          + LD++ D  ++ +A     +    V +LVN AG+   G+ L E  
Sbjct: 50  RVVP----------LQLDVT-DPASVAAA----AEAASDVTILVNNAGIFRTGSLLLEGD 94

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
              ++  E                    ++ N +G + M +A    +   G G IV   S
Sbjct: 95  EDALR-AE--------------------METNYFGPLAMARAFAPVLAANGGGAIVNVLS 133

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTD-TPGFENEEKS 337
             + +    L  Y++SK A     +AL  E+   G  +    P   DTD   G +   K+
Sbjct: 134 VLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD-APKA 192

Query: 338 KPRE 341
            P +
Sbjct: 193 SPAD 196

Length = 238

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 52/254 (20%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           T  T+ +TGG+SGIG  +A    + G  V I  R+E++L                     
Sbjct: 4   TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERL--------------------- 42

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
             E K   P       I     D++ D ++ R  ++        + +L+N AG+      
Sbjct: 43  -AEAKAENPE------IHTEVCDVA-DRDSRRELVEWLKKEYPNLNVLINNAGIQ---RN 91

Query: 217 EEMTMQDI--KVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC 274
           E++T  +      EQ                   I  NL   I +T  L+  + ++    
Sbjct: 92  EDLTGAEDLLDDAEQE------------------IATNLLAPIRLTALLLPHLLRQPEAT 133

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
           I+  +S  A + +     Y ++K A+  +  AL  ++K + + +    PP  DT     +
Sbjct: 134 IINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTTEGNTQ 193

Query: 335 EKSKPRETSLISQT 348
            + K   ++ IS+T
Sbjct: 194 ARGKMPLSAFISET 207

Length = 245

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 59.3 bits (144), Expect = 7e-10
 Identities = 57/245 (23%), Positives = 94/245 (38%), Gaps = 53/245 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VT   SGIGK  A+  A++G  + I    DE+   +  EE+                   
Sbjct: 7   VTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV---------------RSHG 51

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                       E   LD+S D      AL   + R G + +LVN AG        +M  
Sbjct: 52  VRA---------EIRQLDLS-DLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDF 101

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG--CIVITA 279
            +                   WR   +  +++ G    ++     M ++G+G   I IT 
Sbjct: 102 DE-------------------WRK--IFTVDVDGAFLCSQIAARHMVKQGQGGRIINIT- 139

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP--GFENEE-K 336
           S   +  + G +AYT++K AL G  +A+ +E+ + G+ +    P    TP  G ++ + K
Sbjct: 140 SVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVK 199

Query: 337 SKPRE 341
              R 
Sbjct: 200 PDSRP 204

Length = 256

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 8e-10
 Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 52/199 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SGIG+ VA      GA V I      +   A  EI  A                 
Sbjct: 11  LTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPA----------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        VSLD++   ++I   +  A++R G + +L N A +     + +++  
Sbjct: 54  ----------AIAVSLDVT-RQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDIS-- 100

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWT-VIDLNLYGTIHMTKALVEGMKQRGRGCIVIT-AS 280
                                 S+  +  +N+ G   + +A+   M ++GRG  +I  AS
Sbjct: 101 --------------------RDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS 140

Query: 281 QAANLGIYGLAAYTSSKFA 299
           QA   G   ++ Y ++K A
Sbjct: 141 QAGRRGEALVSHYCATKAA 159

Length = 257

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 58.9 bits (142), Expect = 8e-10
 Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 46/232 (19%)

Query: 98  NGTLS-VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           NG ++ VTGG+ GIGK + +  A+ GA V I     K   +A E +              
Sbjct: 5   NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSK---EAAENLVN------------ 49

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
             E+ K   +      +  V  D+SK  E+    ++ A++  G V +LVN AG+    T 
Sbjct: 50  --ELGKEGHD------VYAVQADVSK-VEDANRLVEEAVNHFGKVDILVNNAGITRDRTF 100

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           +++  +D        W R             VID+NL    + T A++  + +   G I+
Sbjct: 101 KKLNRED--------WER-------------VIDVNLSSVFNTTSAVLPYITEAEEGRII 139

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
             +S     G +G   Y+++K  + GF ++L +E+ ++ +T+    P   DT
Sbjct: 140 SISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDT 191

Length = 247

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 1/103 (0%)

Query: 248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
            I  N+ GT  + +A  E MK +  G  ++ +S A   G  GL  Y +SK AL G A+  
Sbjct: 58  AIRANVVGTRRLLEAARELMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQW 117

Query: 308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGG 350
             E   +GL  T          G   +    P E     + G 
Sbjct: 118 ASEGWGNGLPATAVACGTWAGSGMA-KGPVAPEEILGNRRHGV 159

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 63/286 (22%), Positives = 94/286 (32%), Gaps = 72/286 (25%)

Query: 46  TNGTLSVDGAAGSFKNFKSSEPRTNLEPPCRGVRTVASREPHLQMKRYLAPTNGTLSVTG 105
           T  TL VDG    +     +       P     R VA                    +TG
Sbjct: 237 TGSTLVVDGGWTVYGGSGPASTAQAPSPLAESPRVVA--------------------ITG 276

Query: 106 GSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACP 165
           G+ GIG+ VA   A  G  + I+ RD +   +  E +                       
Sbjct: 277 GARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--------------------GDE 316

Query: 166 NPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDI 224
           +            DI+ D   + SA      R G + +LVN AG+A +     E + +D 
Sbjct: 317 HLSV-------QADIT-DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDF 368

Query: 225 KVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAAN 284
                                  V D+NL G     +A    M     G IV   S A+ 
Sbjct: 369 T---------------------RVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASL 405

Query: 285 LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG 330
           L +    AY +SK A+   + +L  E   +G+ +    P   +TP 
Sbjct: 406 LALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA 451

Length = 520

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 57.6 bits (139), Expect = 2e-09
 Identities = 53/228 (23%), Positives = 85/228 (37%), Gaps = 44/228 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC-PNPKFIRFIEYEEIK 161
           VTG S GIG+  A+  A+ GA V ++ R+E+KL Q  + I +     P++    +     
Sbjct: 9   VTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL-DLLTCT 67

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                              S++ + +   +     R   V  L N   +     L E   
Sbjct: 68  -------------------SENCQQLAQRIAVNYPRLDGV--LHNAGLLGDVCPLSEQNP 106

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           Q                    W+   V  +N+  T  +T+AL+  + +   G +V T+S 
Sbjct: 107 QV-------------------WQ--DVXQVNVNATFMLTQALLPLLLKSDAGSLVFTSSS 145

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
               G     AY  SKFA +G  + L  E +Q  L +    P  T T 
Sbjct: 146 VGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLRVNCINPGGTRTA 193

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 46/205 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG+ VA+  AK GA + IV  DE    +   E K+          +E E +K 
Sbjct: 51  ITGGDSGIGRAVAVLFAKEGADIAIVYLDEH---EDANETKQR---------VEKEGVK- 97

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C           +  D+S D    + A++  +   G + +LVN A         +   Q
Sbjct: 98  -CL---------LIPGDVS-DEAFCKDAVEETVRELGRLDILVNNAA-------FQYPQQ 139

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            ++ +      + + T             N+Y   HMTKA +  +KQ     I+ T S  
Sbjct: 140 SLEDITAEQLDKTFKT-------------NIYSYFHMTKAALPHLKQ--GSAIINTGSIT 184

Query: 283 ANLGIYGLAAYTSSKFALKGFAEAL 307
              G   L  Y+++K A+  F  +L
Sbjct: 185 GYEGNETLIDYSATKGAIHAFTRSL 209

Length = 290

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 51/229 (22%)

Query: 98  NGTLSVTGGSS-GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           +G L+ T  SS GIG  VA   A+ GA V +++R+E+ L +A+E+IK           ++
Sbjct: 7   SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN-------VD 59

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISK--DYENIRSALQPAMDRCGPVYMLVNCAGMALCG 214
                           + Y+  D++K  D E     L+      G   +     G    G
Sbjct: 60  ----------------VSYIVADLTKREDLERTVKELK----NIGEPDIFFFSTGGPKPG 99

Query: 215 TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC 274
              EM+M+D                   W     + L LY  +++T+ALV  M+++G G 
Sbjct: 100 YFMEMSMED-------------------WEG--AVKLLLYPAVYLTRALVPAMERKGFGR 138

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           I+ + S A    I  +A     + ++ G    L  E+   G+T+   +P
Sbjct: 139 IIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMP 187

Length = 263

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 49/202 (24%), Positives = 80/202 (39%), Gaps = 48/202 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTGG+ G+G  +A   A+RGA  + I  R+ +K      E++       F++        
Sbjct: 11  VTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ-------- 62

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            D+S D E+ R  +  A +  G +  LVN AG+   GT+ +   
Sbjct: 63  ----------------ADLS-DVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILD--- 102

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITAS 280
                           T   L+       +N+     + +  ++ M++R   G IV   S
Sbjct: 103 ----------------TSPELFDR--HFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS 144

Query: 281 QAANLGIYGLAAYTSSKFALKG 302
            +A+ G   LAAY +SK AL  
Sbjct: 145 MSAHGGQPFLAAYCASKGALAT 166

Length = 260

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 57.1 bits (138), Expect = 4e-09
 Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 49/238 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S G+G  +A   A+ GA V +   R  +    A+    +A      I+        
Sbjct: 5   VTGASRGLGAAIARSFAREGARVVVNYYRSTES---AEAVAAEAGERAIAIQA------- 54

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            D+ +D + +++ ++ A +  GPV  +VN A             
Sbjct: 55  -----------------DV-RDRDQVQAMIEEAKNHFGPVDTIVNNA----LIDFPFDPD 92

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
           Q                    W  +   ++  + G +++ +A++   K+RG G ++   +
Sbjct: 93  QRKTFDTID------------WEDYQQQLEGAVKGALNLLQAVLPDFKERGSGRVINIGT 140

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP---PDTDTPGFENEE 335
                 +     YT++K AL GF   +  E+   G+T+ +        TD      +E
Sbjct: 141 NLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITVNMVSGGLLKVTDASAATPKE 198

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 51/208 (24%), Positives = 74/208 (35%), Gaps = 51/208 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG++ IG  VA      GA V IV  D          + +        RFI       
Sbjct: 11  VTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERA------RFIA------ 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           DI+ D   I  A+   + R G V +LVN A    C      T  
Sbjct: 59  ---------------TDITDD-AAIERAVATVVARFGRVDILVNLA----C------TYL 92

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D           G  +  A W +   +D+NL     + +A    + + G G IV   S +
Sbjct: 93  D----------DGLASSRADWLA--ALDVNLVSAAMLAQAAHPHLARGG-GAIVNFTSIS 139

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYME 310
           A     G   Y +SK A++    ++ M+
Sbjct: 140 AKFAQTGRWLYPASKAAIRQLTRSMAMD 167

Length = 261

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 56.8 bits (137), Expect = 4e-09
 Identities = 51/234 (21%), Positives = 93/234 (39%), Gaps = 43/234 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SG+G   A+  AK GA +++V  +E+ L  A+  + +  P+ +            
Sbjct: 8   ITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAE------------ 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  +  D+S D   + + +   +++ G +    N AG+     L E    
Sbjct: 56  ----------VLLIKADVS-DEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGA 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D            +           V+ +NL G  +  + +++ M+++G G IV TAS  
Sbjct: 105 DE-----------FDK---------VVSINLRGVFYGLEKVLKVMREQGSGMIVNTASVG 144

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK 336
              G+   + Y ++K  + G      +E  Q G+ I    P    TP  E   K
Sbjct: 145 GIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAPGAILTPMVEGSLK 198

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 57.1 bits (138), Expect = 4e-09
 Identities = 68/281 (24%), Positives = 115/281 (40%), Gaps = 68/281 (24%)

Query: 90  MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNP 149
           MKR     N    +TG S+GIG+  AI  A+ GA+V  V   E       E +       
Sbjct: 1   MKRL---ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAE----AVSETV------- 46

Query: 150 KFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG 209
                   ++IK      K         +DIS + + ++       ++ G V +L N AG
Sbjct: 47  --------DKIKSNGGKAKAYH------VDISDE-QQVKDFASEIKEQFGRVDVLFNNAG 91

Query: 210 MALCGTLEEMTMQDIKVMEQP--LWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM 267
           +              ++ E P  ++ +             ++ +++ GT  MTK L+  M
Sbjct: 92  VDNAAG---------RIHEYPVDVFDK-------------IMAVDMRGTFLMTKMLLPLM 129

Query: 268 KQRGRGCIVITAS---QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP 324
            ++G G I+ T+S   QAA+L   G   Y ++K A+  F +++ +E  + G+      P 
Sbjct: 130 MEQG-GSIINTSSFSGQAADLYRSG---YNAAKGAVINFTKSIAIEYGRDGIRANAIAPG 185

Query: 325 DTDTP-------GFENEEKSKPRET-SLISQTGGLYRPEVV 357
             +TP         E+E     RE    ++  G L +PE V
Sbjct: 186 TIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEV 226

Length = 272

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 48/211 (22%), Positives = 76/211 (36%), Gaps = 45/211 (21%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
             +V G   G+G  +A   A  G  V + AR E KL     +I +               
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGG----------- 49

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
             KA P             D   + E I        +  GP+ +LV  AG  +   + E 
Sbjct: 50  SAKAVP------------TDARDEDEVIA-LFDLIEEEIGPLEVLVYNAGANVWFPILET 96

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           T +  +                +W       +  +G     +   + M  RGRG I+ T 
Sbjct: 97  TPRVFE---------------KVWE------MAAFGGFLAAREAAKRMLARGRGTIIFTG 135

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYME 310
           + A+  G  G AA+  +KFAL+  A+++  E
Sbjct: 136 ATASLRGRAGFAAFAGAKFALRALAQSMARE 166

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 50/223 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SGIG  +A   A  GA V +             EI +                  
Sbjct: 6   VTGGASGIGLAIAKRLAAEGAAVVV--------ADIDPEIAEKVAEAAQGG--------- 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
               P+ +     V  D++ +   ++SA + A+   G + ++V+ AG+A    + E    
Sbjct: 49  ----PRALG----VQCDVTSE-AQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAE---- 95

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITAS- 280
                          T L  W     +D+NL G   +++     MK +G  G IV  AS 
Sbjct: 96  ---------------TSLEDWN--RSMDINLTGHFLVSREAFRIMKSQGIGGNIVFNASK 138

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            A   G    AAY+++K A    A  L +E  + G+ +    P
Sbjct: 139 NAVAPGP-NAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVNP 180

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 57.1 bits (138), Expect = 4e-09
 Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 48/222 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIR--FIEYEEI 160
           +TGG+  +G  +A   A+ GA V  + R+++K  +  +EI         +    ++   +
Sbjct: 10  ITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDRASL 69

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG------MALCG 214
           ++A               +I   +              G V +L+N AG           
Sbjct: 70  ERARE-------------EIVAQF--------------GTVDILINGAGGNHPDATTDPE 102

Query: 215 TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC 274
             E  T Q+   +++  W               V DLNL G+   ++   + M ++  G 
Sbjct: 103 HYEPETEQNFFDLDEEGWEF-------------VFDLNLNGSFLPSQVFGKDMLEQKGGS 149

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL 316
           I+  +S  A   +  + AY+++K A+  F + L +E   +G+
Sbjct: 150 IINISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAVEFATTGV 191

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 6e-09
 Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 48/183 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V GG+SGI   +A   A+ GA+V + +R ++K+  A  ++++A                 
Sbjct: 14  VVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA----------------- 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVN-CAGMALCGTLEEMTM 221
               P+ +     VS D+ +DY  + +A     D  GP+ +LV+  AG         M+ 
Sbjct: 57  ---GPEGLG----VSADV-RDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPA-PAAGMSA 107

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
              K                     TV+D++L GT ++ KA    +++ G   I I+A Q
Sbjct: 108 NGFK---------------------TVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ 146

Query: 282 AAN 284
           A  
Sbjct: 147 AFV 149

Length = 264

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 52/225 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDE--KKLLQAQEEIKKACPNPKFIRFIEYEE 159
           VTGG++GIG+ +     K GA V IV  +D+  + +  +       C             
Sbjct: 23  VTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVC------------- 69

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                          +   D++ + +++  A+   +D+ G + ++VN AG  L G     
Sbjct: 70  ---------------FFHCDVTVE-DDVSRAVDFTVDKFGTLDIMVNNAG--LTGP---- 107

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
              DI+ +E           L+ +    V D+N+ G     K     M    +G IV   
Sbjct: 108 PCPDIRNVE-----------LSEFEK--VFDVNVKGVFLGMKHAARIMIPLKKGSIVSLC 154

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP 324
           S A+ +G  G  AYT SK A+ G   ++  E+ + G+ +  C+ P
Sbjct: 155 SVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVN-CVSP 198

Length = 280

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 51/231 (22%), Positives = 88/231 (38%), Gaps = 50/231 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SG G+ +A   A+ GA V I   +      A+            I+         
Sbjct: 10  VTGAGSGFGEGIARRFAQEGARVVIADINADG---AERVAADIGEAAIAIQ--------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D++K  + + + ++ A+ + G + +LVN AG+    T     M 
Sbjct: 58  ---------------ADVTKRAD-VEAMVEAALSKFGRLDILVNNAGI----THRNKPML 97

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           ++   E   + R             V  +N+       +ALV  M+++G G I+  AS A
Sbjct: 98  EVDEEE---FDR-------------VFAVNVKSIYLSAQALVPHMEEQGGGVIINIASTA 141

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFE 332
                 GL  Y +SK  +    +A+ +E+    + +  LC P   +TP   
Sbjct: 142 GLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCLC-PVAGETPLLS 191

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 59/235 (25%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           ++ T+ VTG + GIG  +++  A  G  V  +AR                    F     
Sbjct: 2   SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS---------------AIDDF----- 41

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                   P        E  + D++ D E   + L    +   PV  +VN  G+AL   L
Sbjct: 42  --------PG-------ELFACDLA-DIEQTAATLAQINEI-HPVDAIVNNVGIALPQPL 84

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
            ++ +  +                       V DLN+   + +T+A +EGMK R +G IV
Sbjct: 85  GKIDLAAL---------------------QDVYDLNVRAAVQVTQAFLEGMKLREQGRIV 123

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
              S+A   G     +Y+++K AL G      +E+ + G+T+    P   +T  F
Sbjct: 124 NICSRAI-FGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELF 177

Length = 234

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 54/261 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           +TGGS+G+G+ +A+   K  A V I  R DE++     EEIKKA            E I 
Sbjct: 12  ITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG----------EAIA 61

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         V  D++ +  ++ + +Q A+   G + +++N AG+       EM++
Sbjct: 62  --------------VKGDVTVE-SDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSL 106

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITAS 280
           +D        W +             VI+ NL G    ++  ++   +   +G I+  +S
Sbjct: 107 ED--------WNK-------------VINTNLTGAFLGSREAIKYFVEHDIKGNIINMSS 145

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP----GFENEEK 336
               +       Y +SK  +K   E L ME    G+ +    P   +TP     F + ++
Sbjct: 146 VHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQ 205

Query: 337 SKPRETSLISQTGGLYRPEVV 357
               E S+I   G + +PE +
Sbjct: 206 RADVE-SMIPM-GYIGKPEEI 224

Length = 261

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 54.1 bits (131), Expect = 4e-08
 Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 36/139 (25%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY-- 157
           TL +TG S GIG  +A+ AA+ GA++ I A             K A P+PK    I    
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANIVIAA-------------KTAEPHPKLPGTIHTAA 54

Query: 158 EEIK----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MAL 212
           EEI+    +A P          +  D+ +D + + +A+  A++R G + + VN A  + L
Sbjct: 55  EEIEAAGGQALP----------LVGDV-RDEDQVAAAVAKAVERFGGIDICVNNASAINL 103

Query: 213 CGTLE-EMT----MQDIKV 226
            GT +  M     MQ I V
Sbjct: 104 TGTEDTPMKRFDLMQQINV 122

Length = 273

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 46/214 (21%)

Query: 90  MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNP 149
           M+ +L      + VTGGSSGIG  +  E    GA+V               +I       
Sbjct: 1   MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNA------------DIHGGDGQH 48

Query: 150 KFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG 209
           +  +F+                       D+S   E +   +   +++ G +  LVN AG
Sbjct: 49  ENYQFVP---------------------TDVS-SAEEVNHTVAEIIEKFGRIDGLVNNAG 86

Query: 210 MALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQ 269
           + +   L +      K          Y    A +    + ++N  G   M++A+   M +
Sbjct: 87  INIPRLLVDEKDPAGK----------YELNEAAFDK--MFNINQKGVFLMSQAVARQMVK 134

Query: 270 RGRGCIVITASQAANLGIYGLAAYTSSKFALKGF 303
           +  G IV  +S+A   G  G + Y ++K AL  F
Sbjct: 135 QHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSF 168

Length = 266

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 57/213 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGSSGIG        + GA V I  RDE++L  A+  +++        +F     +  
Sbjct: 13  VTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLRE--------KFPGARLLAA 64

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+  D  ++ +       R G V MLVN AG     T  + T  
Sbjct: 65  RC--------------DV-LDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDD 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV------ 276
                               WR    ++L  +  I+ T+A +  ++      IV      
Sbjct: 110 A-------------------WRD--ELELKYFSVINPTRAFLPLLRASAAASIVCVNSLL 148

Query: 277 -------ITASQAANLGIYGLAAYTSSKFALKG 302
                  + A+ AA  G+  L    +++ A KG
Sbjct: 149 ALQPEPHMVATSAARAGLLNLVKSLATELAPKG 181

Length = 265

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 52.8 bits (127), Expect = 7e-08
 Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 59/234 (25%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHV--TIVARDEKKLLQAQEEIKKACPNPKFIRF 154
           T   + V GGS GIG  +       GA+V  T     +     AQE    A         
Sbjct: 5   TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATA--------- 55

Query: 155 IEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG 214
                                V  D S D    R A+   + + G + +LV  AG+A+ G
Sbjct: 56  ---------------------VQTD-SAD----RDAVIDVVRKSGALDILVVNAGIAVFG 89

Query: 215 TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC 274
              E+   DI  +                       +N++   H +      M + GR  
Sbjct: 90  DALELDADDIDRL---------------------FKINIHAPYHASVEAARQMPEGGR-I 127

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           I+I +     + + G+AAY +SK AL+G A  L  +    G+TI +  P   DT
Sbjct: 128 IIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDT 181

Length = 237

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 53.3 bits (128), Expect = 7e-08
 Identities = 51/228 (22%), Positives = 85/228 (37%), Gaps = 50/228 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG+ VA   A  GA V +V R E  + +   EI  A                 
Sbjct: 9   VTGAAQGIGRGVAERLAGEGARVLLVDRSE-LVHEVLAEILAAGDA-------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-LEEMTM 221
                         + D+   Y   +  ++ A++R G V +L+N  G  +     E    
Sbjct: 54  ----------AHVHTADLET-YAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEE 102

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           + I+                       I  +L+ T+   +A++  M +R +G IV   S 
Sbjct: 103 EQIE---------------------AEIRRSLFPTLWCCRAVLPHMLERQQGVIV-NVSS 140

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
            A  GIY    Y+++K  +     +L  E  + G+ +    P  T+ P
Sbjct: 141 IATRGIYR-IPYSAAKGGVNALTASLAFEHARDGIRVNAVAPGGTEAP 187

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 8e-08
 Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 46/199 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG  +A   AK GA  TIV  D       QE + K            Y E   
Sbjct: 15  ITGASYGIGFAIAKAYAKAGA--TIVFNDIN-----QELVDKGLAA--------YRE--- 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  I    YV  D++ D + +++ +       G + +LVN AG+     + EM+ +
Sbjct: 57  -----LGIEAHGYV-CDVT-DEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAE 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   +R   VID++L     ++KA++  M ++G G I+   S  
Sbjct: 110 D-------------------FRQ--VIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM 148

Query: 283 ANLGIYGLAAYTSSKFALK 301
           + LG   ++AY ++K  LK
Sbjct: 149 SELGRETVSAYAAAKGGLK 167

Length = 265

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 52.8 bits (127), Expect = 8e-08
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 31/125 (24%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFI--EY 157
           TL +TG S GIGK +A++AA+ GA+V I A             K A P+PK    I    
Sbjct: 5   TLFITGASRGIGKAIALKAARDGANVVIAA-------------KTAEPHPKLPGTIYTAA 51

Query: 158 EEIK----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA-GMAL 212
           EEI+    KA P            +DI +D + +R+A++ A+++ G + +LVN A  ++L
Sbjct: 52  EEIEAAGGKALP----------CIVDI-RDEDQVRAAVEKAVEKFGGIDILVNNASAISL 100

Query: 213 CGTLE 217
            GTL+
Sbjct: 101 TGTLD 105

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 52.9 bits (127), Expect = 8e-08
 Identities = 48/227 (21%), Positives = 77/227 (33%), Gaps = 50/227 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  VA    + G  V   AR   K+    E +   C +  +     Y+    
Sbjct: 11  VTGASVGIGAAVARALVQHGMKVVGCARRVDKI----EALAAECQSAGYPTLFPYQ---- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+S + E I S       +   V + +N AG+A    L     +
Sbjct: 63  -C--------------DLS-NEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTE 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG--RGCIVITAS 280
             K M                      D+N+      T+   + MK+R    G I+   S
Sbjct: 107 GWKEM---------------------FDVNVLALSICTREAYQSMKERNVDDGHIININS 145

Query: 281 QAANLGIYG--LAAYTSSKFALKGFAEALYMEVKQSGLTITL-CLPP 324
            + +          Y ++K A+    E L  E++++   I    + P
Sbjct: 146 MSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAKTHIRATSISP 192

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.7 bits (127), Expect = 9e-08
 Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 37/200 (18%)

Query: 98  NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY 157
           +  + +TGG+ G+G+ +A   A++GA + ++  +++KL +A  E                
Sbjct: 5   DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG----------- 53

Query: 158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
                            Y   +++ + +   +  Q A D  G +  L+N AG+   G L 
Sbjct: 54  ------------TEVRGYA-ANVTDEEDVEATFAQIAED-FGQLNGLINNAGILRDGLL- 98

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
                 +K  +  +  +     L  ++S  VID+NL G     +     M + G   ++I
Sbjct: 99  ------VKAKDGKVTSK---MSLEQFQS--VIDVNLTGVFLCGREAAAKMIESGSKGVII 147

Query: 278 TASQAANLGIYGLAAYTSSK 297
             S  A  G  G   Y++SK
Sbjct: 148 NISSIARAGNMGQTNYSASK 167

Length = 253

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 53.3 bits (128), Expect = 9e-08
 Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 52/227 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIGK  A + A++G ++ +VAR+  KL    + I+               +IK 
Sbjct: 58  VTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSK---------TQIKT 108

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMT 220
              +          S DI +  + I+  ++  +D    V +L+N  G++        E+ 
Sbjct: 109 VVVD---------FSGDIDEGVKRIKETIE-GLD----VGVLINNVGVSYPYARFFHEVD 154

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            + +K                      +I +N+ GT  +T+A++ GM +R +G I+   S
Sbjct: 155 EELLK---------------------NLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS 193

Query: 281 QAANL----GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            AA +     +Y  A Y ++K  +  F+  LY+E K+SG+ +   +P
Sbjct: 194 GAAIVIPSDPLY--AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVP 238

Length = 320

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 60/260 (23%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           T   + +TG SSG+G  +A E A +G  + + AR   +L    EE+K             
Sbjct: 1   TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRL----EELK------------- 43

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM---ALC 213
             E+    P    I+ +   +LD++ D++ +        D  G +  ++  AG+   A  
Sbjct: 44  -AELLARYPG---IK-VAVAALDVN-DHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARL 97

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
           GT                   G       W +    + N    +   +A +E  +++G G
Sbjct: 98  GT-------------------GK-----FWANKATAETNFVAALAQCEAAMEIFREQGSG 133

Query: 274 CIVITASQAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF- 331
            +V+ +S +A  G+ G  AAY +SK  +    E L  E+ ++ + ++      T  PG+ 
Sbjct: 134 HLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVS------TIEPGYI 187

Query: 332 ENEEKSKPRETSLI--SQTG 349
            +E  +K + T  +  ++TG
Sbjct: 188 RSEMNAKAKSTPFMVDTETG 207

Length = 248

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 60/273 (21%), Positives = 100/273 (36%), Gaps = 51/273 (18%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTGG+ GIG  +  E A  GA V   AR++K+L +   E ++            ++ 
Sbjct: 8   TALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK----------GFKV 57

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEE 218
               C              D+S   E  +  +        G + +LVN AG  +    ++
Sbjct: 58  EGSVC--------------DVSSRSER-QELMDTVASHFGGKLNILVNNAGTNIRKEAKD 102

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
            T +D  +                     ++  N     H+++     +K  G G IV  
Sbjct: 103 YTEEDYSL---------------------IMSTNFEAAYHLSRLAHPLLKASGNGNIVFI 141

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK 338
           +S A  + +   A Y ++K AL     +L  E  +  + +    P    TP  E   + K
Sbjct: 142 SSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRVNAVAPWVIATPLVEPVIQQK 201

Query: 339 PRETSLISQT--GGLYRPEVVKQSGLTITLCLP 369
                +I +T       PE V  + L   LC+P
Sbjct: 202 ENLDKVIERTPLKRFGEPEEV--AALVAFLCMP 232

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 56/273 (20%), Positives = 97/273 (35%), Gaps = 58/273 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG++GIGK +A   AK GA V I     +        I++A            + I  
Sbjct: 4   VTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGG----------QAIGL 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              +++ + +++ + ++  + + G + +LVN AG    G        
Sbjct: 54  EC--------------NVTSE-QDLEAVVKATVSQFGGITILVNNAGGG--GPKPFDMPM 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                E   W                  LNL+    +++     M++ G G I+  +S +
Sbjct: 97  ---TEEDFEW---------------AFKLNLFSAFRLSQLCAPHMQKAGGGAILNISSMS 138

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF------ENEEK 336
           +      +AAY SSK A+      L  ++   G+ +    P    T         E E  
Sbjct: 139 SENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPGAVKTDALASVLTPEIERA 198

Query: 337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLP 369
                    +  G L  PE +  +   + LC P
Sbjct: 199 MLKH-----TPLGRLGEPEDI--ANAALFLCSP 224

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 51/235 (21%), Positives = 88/235 (37%), Gaps = 52/235 (22%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
            +    VTG + GIG+  A   A+ GA V +   + +   +  ++I         ++   
Sbjct: 5   DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQ--- 61

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                                +D+S D ++ ++     +   G +  LVN A  A+ G  
Sbjct: 62  ---------------------VDVS-DPDSAKAMADATVSAFGGIDYLVNNA--AIYG-- 95

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWT-VIDLNLYGTIHMTKALVEGMKQRGRGCI 275
             M +  +  +               W  +   + +NL G +  T+A+ + M +RG G I
Sbjct: 96  -GMKLDLLITVP--------------WDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAI 140

Query: 276 VITASQAANL--GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           V  +S AA L    YGLA     K  L G  + L  E+    + +    P   DT
Sbjct: 141 VNQSSTAAWLYSNFYGLA-----KVGLNGLTQQLARELGGMNIRVNAIAPGPIDT 190

Length = 250

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 49/222 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG ++G+G+ +A+  A+ GA +    R E    Q Q E                     
Sbjct: 10  VTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE--------------------- 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                   R    ++ D+S D E I++ +  A++  G + +LVN AG+      EE + +
Sbjct: 49  -----ALGRRFLSLTADLS-DIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEK 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITASQ 281
           D                   W    V+++NL     +T+A  +   KQ   G I+  AS 
Sbjct: 103 D-------------------WDD--VMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASM 141

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            +  G   + +YT+SK A+ G  + L  E    G+ +    P
Sbjct: 142 LSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNAIAP 183

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 58/232 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG   A   A  GA V +   D +    A +E+                    
Sbjct: 12  ITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG------------------ 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +V  D++ D + + +    A +  G V +  N AG++          +
Sbjct: 54  -----------LFVPTDVT-DEDAVNALFDTAAETYGSVDIAFNNAGIS--------PPE 93

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D  ++          T L  W+   V D+NL       KA +  M ++G+G I+ TAS  
Sbjct: 94  DDSILN---------TGLDAWQR--VQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFV 142

Query: 283 ANLGIYGLAA-----YTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A +G    +A     YT+SK  +   +  L ++  + G+ +    P   +TP
Sbjct: 143 AVMG----SATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTP 190

Length = 255

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 18/40 (45%), Positives = 22/40 (55%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI 142
           V GGSSGIG  +A   A  GA VTI +R   +L  A   +
Sbjct: 2   VVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL 41

Length = 230

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 50.6 bits (121), Expect = 5e-07
 Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 47/244 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG+ +     + GA V   AR E      + E+ +A P               
Sbjct: 14  VTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGP--------------- 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGTLEEMTM 221
              + KF+        D++K+ E+I++ +   ++R G +  LVN AG      T +E + 
Sbjct: 59  --GSCKFV------PCDVTKE-EDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSA 109

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           Q+ +                      +++LNL      +K  +  +++  +G I+  +S 
Sbjct: 110 QEFR---------------------DLLNLNLISYFLASKYALPHLRKS-QGNIINLSSL 147

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
             ++G    A Y ++K A+    +AL ++  + G+ +    P +  TP +E      P  
Sbjct: 148 VGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVNCISPGNIWTPLWEELAAQTPDT 207

Query: 342 TSLI 345
            + I
Sbjct: 208 LATI 211

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 58/216 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG        + GA V   AR              + P+              
Sbjct: 14  VTGGTKGIGAATVARLLEAGARVVTTAR--------------SRPDD------------- 46

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG--MALCGTLEEMT 220
             P       +E+V+ D++   E   +  +  ++R G V +LV+  G   A  G    +T
Sbjct: 47  -LPEG-----VEFVAADLTTA-EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALT 99

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            ++        W                ++LNL   + + +AL+ GM  RG G I+   S
Sbjct: 100 DEE--------WQDE-------------LNLNLLAAVRLDRALLPGMIARGSGVIIHVTS 138

Query: 281 QAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSG 315
               L +     AY ++K AL  ++++L  EV   G
Sbjct: 139 IQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKG 174

Length = 260

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 45/174 (25%)

Query: 108 SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNP 167
           +GIG   A  A + GA V I    E++L +  +E+       +                 
Sbjct: 28  TGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGR----------------- 70

Query: 168 KFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVM 227
                +E V  D++     + + +  A++R G + +LVN AG  L G    + M D    
Sbjct: 71  -----VEAVVCDVT-SEAQVDALIDAAVERLGRLDVLVNNAG--LGGQTPVVDMTD---- 118

Query: 228 EQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITAS 280
           ++  W R             V+D+ L GT   T+A +  M+ RG  G IV  AS
Sbjct: 119 DE--WSR-------------VLDVTLTGTFRATRAALRYMRARGHGGVIVNNAS 157

Length = 262

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 41/193 (21%), Positives = 72/193 (37%), Gaps = 54/193 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +  IGK         GA + +   +   L Q +EE+     N    R I  E    
Sbjct: 7   ITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELT----NLYKNRVIALE---- 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM---ALCGTLEEM 219
                          LDI+   E+I+  ++  +++ G + +L+N A           EE 
Sbjct: 59  ---------------LDIT-SKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEF 102

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
             +                         V+++NL G    ++A ++  K++G+G I+  A
Sbjct: 103 PYEQWN---------------------EVLNVNLGGAFLCSQAFIKLFKKQGKGSIINIA 141

Query: 280 SQAANLGIYGLAA 292
           S      IYG+ A
Sbjct: 142 S------IYGVIA 148

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 44/235 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   A  G  + +     +    A+  +                 I+ 
Sbjct: 3   VTGASRGIGRAIANRLAADGFEICVHYHSGRS--DAESVVS---------------AIQA 45

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              N + ++F      D++ D    R+ L+  +   G  Y +V  AG+        ++ +
Sbjct: 46  QGGNARLLQF------DVA-DRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEE 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        W    HT L             Y  IH     +   +Q GR  I+  AS +
Sbjct: 99  D--------WDIVIHTNLD----------GFYNVIHPCTMPMIRARQGGR--IITLASVS 138

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS 337
             +G  G   Y+++K  L G  +AL +E+ +  +T+    P   DT      E  
Sbjct: 139 GVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD 193

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 52/239 (21%), Positives = 88/239 (36%), Gaps = 50/239 (20%)

Query: 91  KRYLAPTNGTLS-----VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKA 145
           K    P   TL+     VTGG+ GIG+  A   A  GAHV +   + +       EI   
Sbjct: 402 KLRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQ 461

Query: 146 CPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLV 205
               + +                       + +D++ + + +++A        G V ++V
Sbjct: 462 FGAGRAVA----------------------LKMDVTDE-QAVKAAFADVALAYGGVDIVV 498

Query: 206 NCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE 265
           N AG+A     EE T+Q+        W                +D+   G   + +    
Sbjct: 499 NNAGIATSSPFEETTLQE--------WQLN-------------LDILATGYFLVAREAFR 537

Query: 266 GMKQRGRGC-IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            M+++G G  IV  AS+ A       +AY+++K A    A  L  E    G+ +    P
Sbjct: 538 QMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNP 596

Length = 676

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPK-FIRFIEYEEIK 161
           +TG +SGIGK  A+  AKRG  V +V R++ +  +A++EI+    N   F+  ++  + K
Sbjct: 6   ITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDPK 65

Query: 162 K 162
           +
Sbjct: 66  Q 66

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 52/235 (22%), Positives = 91/235 (38%), Gaps = 61/235 (25%)

Query: 98  NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY 157
              + +TG +SGIGK +A++ AK+G  V    R++  L    +E+     N         
Sbjct: 1   MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVL----DELHTQSAN--------- 47

Query: 158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
                          I  ++ D++ D+   ++AL  +     P   + N       G  E
Sbjct: 48  ---------------IFTLAFDVT-DHPGTKAAL--SQLPFIPELWIFN------AGDCE 83

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMK---QRGRGC 274
            M   D   ++  L  R             V ++N+ G        +EG++     G   
Sbjct: 84  YM---DDGKVDATLMAR-------------VFNVNVLGVA----NCIEGIQPHLSCGHR- 122

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           +VI  S A+ L +    AY +SK A+  FA  L ++++  G+ +    P    TP
Sbjct: 123 VVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATP 177

Length = 240

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 54/234 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSG+G   A   A+ GA V + +R  ++L + + EI+                   
Sbjct: 14  VTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAA------------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        VSLD++ DY++I++A+  A    G + +LVN +G++    L ++T  
Sbjct: 61  -----------HVVSLDVT-DYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPA 108

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC-------- 274
           D                        V D N  G   + + + + M  R +G         
Sbjct: 109 DFDF---------------------VFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGR 147

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           I+  AS A    +  +  Y  SK A+     A+ +E  + G+ +    P   DT
Sbjct: 148 IINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDT 201

Length = 258

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 47/211 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+ +A+  AK G+ V + A+  K+  +  E +K                +K+
Sbjct: 11  VTGSGRGIGRAIAVRLAKEGSLVVVNAK--KRAEEMNETLK---------------MVKE 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+S   E   +  +  +DR G   +LVN AG+ L      +   
Sbjct: 54  NGGEGIG------VLADVSTR-EGCETLAKATIDRYGVADILVNNAGLGLFSPFLNV--- 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D K++++                   I  +    I+ ++ L + M++ G   IV  AS A
Sbjct: 104 DDKLIDK------------------HISTDFKSVIYCSQELAKEMREGGA--IVNIASVA 143

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQ 313
                YGL+ Y + K A+    + L +E+  
Sbjct: 144 GIRPAYGLSIYGAMKAAVINLTKYLALELAP 174

Length = 252

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 55/249 (22%), Positives = 86/249 (34%), Gaps = 52/249 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  +A   A  G  V +          A E +                EI+ 
Sbjct: 10  VTGASRGIGAAIARRLAADGFAVAVNYAGSAAA--ADELV---------------AEIEA 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A      ++       D++ D   +      A    G + +LVN AG+   GT+ +  ++
Sbjct: 53  AGGRAIAVQ------ADVA-DAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLE 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                         I  NL G   + +     + Q GR  I+  ++  
Sbjct: 106 DFD---------------------RTIATNLRGAFVVLREAARHLGQGGR--IINLSTSV 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
             L + G   Y +SK A++G    L  E++  G+T+    P    T  F N      +  
Sbjct: 143 IALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFN-----GKSA 197

Query: 343 SLISQTGGL 351
             I Q  GL
Sbjct: 198 EQIDQLAGL 206

Length = 245

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 47.2 bits (112), Expect = 6e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC-PNPKFIRF 154
           ++ T+ VTG S G+G+ VA   A  GA V +VAR +KKL +  + I +A  P P  IRF
Sbjct: 5   SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Length = 239

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 55/234 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SGIG  +++  A+ GA   I  R                P+ +F      EE++ 
Sbjct: 12  VTGGASGIGAAISLRLAEEGAIPVIFGRSA--------------PDDEFA-----EELRA 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
             P  +F++      +D++ D    R A++  + + G +  LVN AG           + 
Sbjct: 53  LQPRAEFVQ------VDLT-DDAQCRDAVEQTVAKFGRIDGLVNNAG-----------VN 94

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH---MTKALVEGMKQRGRGCIVITA 279
           D   +E          R A   S   ++ NL   IH   M    +  +K   RG IV  +
Sbjct: 95  DGVGLE--------AGREAFVAS---LERNL---IHYYVMAHYCLPHLKA-SRGAIVNIS 139

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
           S+ A  G  G + Y ++K A         + + + G+ +   +P +  TP +EN
Sbjct: 140 SKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN 193

Length = 258

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 46/219 (21%), Positives = 74/219 (33%), Gaps = 67/219 (30%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG+ +       GA V ++ R  +KL   ++                      
Sbjct: 11  ITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDH----------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  V  D++  Y + + A+   +D  G +   V  AG             
Sbjct: 54  ----------VLVVEGDVT-SYADNQRAVDQTVDAFGKLDCFVGNAG------------- 89

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVID--------LNLYGTIHMTKALVEGMKQRGRGC 274
                   +W   Y+T L        +D        +N+ G +   KA +  +K    G 
Sbjct: 90  --------IW--DYNTSLVD-IPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGS 137

Query: 275 IVITASQAANLGIY---GLAAYTSSKFALKGFAEALYME 310
           ++ T S   N   Y   G   YT+SK A+ G    L  E
Sbjct: 138 MIFTLS---NSSFYPGGGGPLYTASKHAVVGLVRQLAYE 173

Length = 263

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 46.4 bits (110), Expect = 9e-06
 Identities = 52/227 (22%), Positives = 82/227 (36%), Gaps = 59/227 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           + G + GIG+ +A   A RG  + +  RD   L     E+                    
Sbjct: 3   ILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALA---------------- 46

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D++ + E + +  Q      GP+ +LV  AG  L   L      
Sbjct: 47  -------------RPADVAAELE-VWALAQEL----GPLDLLVYAAGAILGKPLAR---- 84

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                 +P          A WR   ++D NL G   + K  +  +    R   V   +  
Sbjct: 85  -----TKP----------AAWRR--ILDANLTGAALVLKHALALLAAGARL--VFLGAYP 125

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
             + + GL+AY ++K AL+ + E    EV+  GL +TL  PP  DT 
Sbjct: 126 ELVMLPGLSAYAAAKAALEAYVEVARKEVR--GLRLTLVRPPAVDTG 170

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 48/205 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG ++G G+ +     ++G  V    R +++L + ++E+                    
Sbjct: 5   VTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN----------------- 47

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +    LD+ ++   I   L         + +LVN AG+AL   LE     
Sbjct: 48  ----------LYIAQLDV-RNRAAIEEMLASLPAEWRNIDVLVNNAGLAL--GLEP---- 90

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                        +   +  W   T+ID N  G ++MT+A++ GM +R  G I+   S A
Sbjct: 91  ------------AHKASVEDWE--TMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTA 136

Query: 283 ANLGIYGLAAYTSSKFALKGFAEAL 307
            +    G   Y ++K  ++ F+  L
Sbjct: 137 GSWPYAGGNVYGATKAFVRQFSLNL 161

Length = 248

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 42/208 (20%), Positives = 66/208 (31%), Gaps = 69/208 (33%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V G +  IG  VA   +  G  V    R                                
Sbjct: 3   VIGATGTIGLAVAQLLSAHGHEVITAGRSS------------------------------ 32

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +DI+ D  +I++  +      G    +V+ AG A    L E+T  
Sbjct: 33  -----------GDYQVDIT-DEASIKALFEKV----GHFDAIVSTAGDAEFAPLAELTDA 76

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        + RG +++L        I+L  +G  ++             G I +T+   
Sbjct: 77  D--------FQRGLNSKL-----LGQINLVRHGLPYLND----------GGSITLTSGIL 113

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYME 310
           A   I G AA  +   AL+GF  A  +E
Sbjct: 114 AQRPIPGGAAAATVNGALEGFVRAAAIE 141

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 52/253 (20%), Positives = 98/253 (38%), Gaps = 63/253 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG  +  +   RG + T++A                C +P      E   +  
Sbjct: 3   ITGASRGIGLELVRQLLARG-NNTVIA---------------TCRDPSAAT--ELAALGA 44

Query: 163 ACPNPKFIRFIEYVSLDISKDY----ENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLE 217
           +         +  + LD++ +     E +   L  A      + +L+N AG+    G   
Sbjct: 45  SHSR------LHILELDVTDEIAESAEAVAERLGDA-----GLDVLINNAGILHSYGPAS 93

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           E+  +D+                       V  +N+ G + +T+A +  + +  R  I+ 
Sbjct: 94  EVDSEDLL---------------------EVFQVNVLGPLLLTQAFLPLLLKGARAKIIN 132

Query: 278 TASQAANLG---IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP---DTD-TPG 330
            +S+  ++G     G  +Y +SK AL    ++L +E+K+ G+T+ + L P    TD    
Sbjct: 133 ISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITV-VSLHPGWVRTDMGGP 191

Query: 331 FENEEKSKPRETS 343
           F   +     E S
Sbjct: 192 FAKNKGPITPEES 204

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 56/243 (23%), Positives = 89/243 (36%), Gaps = 62/243 (25%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T+ +TG ++GIGK  A E A+RGA V +  RD  K  +A  EI++   N +         
Sbjct: 3   TVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEV-------- 54

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                     +R ++  SL   + +     A +  +D      +L+N AG          
Sbjct: 55  ---------IVRHLDLASLKSIRAFAAEFLAEEDRLD------VLINNAG---------- 89

Query: 220 TMQDIKVMEQPLWLR--GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
                 VM  P      G+  +           +N  G   +T  L++ +K+     IV 
Sbjct: 90  ------VMRCPYSKTEDGFEMQFG---------VNHLGHFLLTNLLLDLLKKSAPSRIVN 134

Query: 278 TASQAANLG-----------IYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD 325
            +S A   G            Y    AY  SK A   F   L   ++ +G+T+    P  
Sbjct: 135 VSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVLFTRELARRLQGTGVTVNALHPGV 194

Query: 326 TDT 328
             T
Sbjct: 195 VRT 197

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKK 144
           VTG S GIGK +A+  A+ G  + +  AR  K   +  EEI+ 
Sbjct: 9   VTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA 51

Length = 250

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 44/233 (18%)

Query: 98  NGTLS-VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           +G ++ VTG S GIG+ +A+  A  GA V I     K   QA +E          IR IE
Sbjct: 5   DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK---QAADET---------IREIE 52

Query: 157 YEEIKKACPNPKFIRFIEYVSLD-ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT 215
               K       F+   +  S+D + K  E +++ LQ  +     + +LVN AG+   GT
Sbjct: 53  SNGGK------AFLIEADLNSIDGVKKLVEQLKNELQIRVG-TSEIDILVNNAGIGTQGT 105

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
           +E  T +   + ++                  ++ +N+     + +  +  ++  GR  +
Sbjct: 106 IENTTEE---IFDE------------------IMAVNIKAPFFLIQQTLPLLRAEGR--V 142

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           +  +S    LG  G  AY  SK AL      L   + + G+T+   +P  T T
Sbjct: 143 INISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKT 195

Length = 254

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 65/255 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           +TGG+ GIG+ +A    + GA V ++    E +  + +E                     
Sbjct: 12  ITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE--------------------- 50

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                    + +  +  D+  + + ++ + +      G V +LVN AG+      EE   
Sbjct: 51  ---------KGVFTIKCDVG-NRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDE 100

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +    M                     I +NL G I+ T   +  +K    G IV  AS 
Sbjct: 101 EKYNKM---------------------IKINLNGAIYTTYEFLPLLKLSKNGAIVNIAS- 138

Query: 282 AANLGIYGLAA-----YTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTD-TPGFEN 333
             N GI G AA     Y  +K  +      L  E+ + G+ +    P   +TD T   ++
Sbjct: 139 --NAGI-GTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS 195

Query: 334 EEKSKPRETSLISQT 348
           +E+++       ++T
Sbjct: 196 QEEAEKLRELFRNKT 210

Length = 255

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 45.3 bits (107), Expect = 3e-05
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 22/142 (15%)

Query: 183 DYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLAL 242
           D + +++  Q A      V +LVN AG+   G    M+ +D                   
Sbjct: 63  DRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDED------------------- 103

Query: 243 WRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKG 302
           W S  V+++NL  T  +T+ L   M +R  G I+   S     G  G A Y +SK  + G
Sbjct: 104 WDS--VLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIG 161

Query: 303 FAEALYMEVKQSGLTITLCLPP 324
           F+++L  E+    +T+  C+ P
Sbjct: 162 FSKSLAQEIATRNVTVN-CVAP 182

Length = 245

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 17/46 (36%), Positives = 23/46 (50%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPN 148
           VTG ++G+G   A   A +GAHV +  R+  K   A   I  A P 
Sbjct: 21  VTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPG 66

Length = 306

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 4e-05
 Identities = 47/215 (21%), Positives = 80/215 (37%), Gaps = 56/215 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S G+G+ +A +  ++G HV  ++R E K L    E      N              
Sbjct: 6   ITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY----NSNLT---------- 51

Query: 163 ACPNPKFIRFIEYVSLDIS------KDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                       + SLD+        ++  I S++Q   D    ++ L+N AGM      
Sbjct: 52  ------------FHSLDLQDVHELETNFNEILSSIQE--DNVSSIH-LINNAGMV----- 91

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR-GRGCI 275
               ++ I+  E    +   H             LNL   + +T   ++  K       +
Sbjct: 92  --APIKPIEKAESEELITNVH-------------LNLLAPMILTSTFMKHTKDWKVDKRV 136

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYME 310
           +  +S AA    +G +AY SSK  L  F + +  E
Sbjct: 137 INISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATE 171

Length = 251

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 45/209 (21%), Positives = 69/209 (33%), Gaps = 59/209 (28%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A E A RG  + I    D+ +  +   E+  A                
Sbjct: 6   VTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRR------------- 52

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDR----CGPVYMLVNCAGMALCGTLE 217
                        Y   DI +      S  +  +D+     G +  LVN AG+A+     
Sbjct: 53  -----------AIYFQADIGE-----LSDHEALLDQAWEDFGRLDCLVNNAGIAVRP--- 93

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM------KQRG 271
                D+  + +  + R             +I +NL G   +T+A+   M          
Sbjct: 94  ---RGDLLDLTEDSFDR-------------LIAINLRGPFFLTQAVARRMVEQPDRFDGP 137

Query: 272 RGCIVITASQAANLGIYGLAAYTSSKFAL 300
              I+   S  A L       Y  SK  L
Sbjct: 138 HRSIIFVTSINAYLVSPNRGEYCISKAGL 166

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 44.9 bits (106), Expect = 4e-05
 Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 50/231 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + GIG+  A    + GA V I    +  L  A+    +  P               
Sbjct: 8   ITGSARGIGRAFAQAYVREGARVAIA---DINLEAARATAAEIGPA-------------- 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           AC           +SLD++ D  +I   +   +DR G + +LVN A +     + ++T  
Sbjct: 51  ACA----------ISLDVT-DQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDIT-- 97

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT-ASQ 281
                      R  + RL          +N+ GT+ M +A+   M  +GRG  +I  ASQ
Sbjct: 98  -----------RESYDRL--------FAINVSGTLFMMQAVARAMIAQGRGGKIINMASQ 138

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
           A   G   +  Y ++K A+    ++  + + + G+ +    P   D   ++
Sbjct: 139 AGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWD 189

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 45.1 bits (107), Expect = 6e-05
 Identities = 49/241 (20%), Positives = 88/241 (36%), Gaps = 60/241 (24%)

Query: 77  GVRTVASREP----HLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVAR- 130
           G+R V + EP                G   VTGG+ GIG+ +A   A+R GA + ++ R 
Sbjct: 180 GLRYVQTLEPLPLPAGAAASAPLKPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRS 239

Query: 131 ----DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYEN 186
               +E+   Q    ++                             + Y+S D++ D   
Sbjct: 240 PLPPEEEWKAQTLAALEALGAR------------------------VLYISADVT-DAAA 274

Query: 187 IRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW 246
           +R  L+   +R G +  +++ AG+     L + T +D +                     
Sbjct: 275 VRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFE--------------------- 313

Query: 247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEA 306
            V+   + G +++ +AL            V+ +S +A  G  G A Y ++   L  FA  
Sbjct: 314 AVLAPKVDGLLNLAQAL----ADEPLDFFVLFSSVSAFFGGAGQADYAAANAFLDAFAAY 369

Query: 307 L 307
           L
Sbjct: 370 L 370

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 42.9 bits (102), Expect = 8e-05
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 24/131 (18%)

Query: 99  GTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY 157
           GT  VTGG  G+G  +A   A+RGA H+ +++R      +A+  +               
Sbjct: 1   GTYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL--------------- 45

Query: 158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
            E++           +  V+ D+S D + +R+ L        P+  +++ AG+     L 
Sbjct: 46  AELEARGAE------VTVVACDVS-DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLA 98

Query: 218 EMTMQDI-KVM 227
            MT +D  +V+
Sbjct: 99  NMTAEDFARVL 109

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 28/123 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VT  S GIG +VA E  K+GA V I +R+E+ L +A +E+K            EY E   
Sbjct: 5   VTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK------------EYGE--- 49

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT--LEEMT 220
                     +  V  D+S D +++++ ++ A +  G +  LV  AG   C    L E  
Sbjct: 50  ----------VYAVKADLS-DKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAG 98

Query: 221 MQD 223
             D
Sbjct: 99  YSD 101

Length = 259

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 63/220 (28%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTGG  GIG  +A   A  G  + I    D+++L   Q+E++                  
Sbjct: 7   VTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELR------------------ 48

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEM 219
                      + +   D++ D     + L  A    G +  LVN AG+ +   G L ++
Sbjct: 49  ------ALGVEVIFFPADVA-DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDL 101

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGMKQRGR------ 272
           T                        S+  V+ +NL G   +T+A+ + M  +        
Sbjct: 102 TP----------------------ESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPH 139

Query: 273 GCIV-ITASQAANLGIYGLAAYTSSKFAL----KGFAEAL 307
             IV +++  A  +       Y  SK  L    + FA  L
Sbjct: 140 RSIVFVSSVNAIMVSP-NRGEYCISKAGLSMAAQLFAARL 178

Length = 256

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 59/231 (25%), Positives = 88/231 (38%), Gaps = 55/231 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   A++GAHV + +R         + I  A                K
Sbjct: 13  VTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG--------------GK 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A      I  +E     I   + +IR       +R G + +LVN A              
Sbjct: 59  AEALACHIGEME----QIDALFAHIR-------ERHGRLDILVNNAAA------------ 95

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS-- 280
                  P +     T L  ++  TV D+N+ G   M+    + MK++G G IV  AS  
Sbjct: 96  ------NPYFGHILDTDLGAFQK-TV-DVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVN 147

Query: 281 --QAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
                +  GIY +     +K A+    +A   E    G+ +   LP  TDT
Sbjct: 148 GVSPGDFQGIYSI-----TKAAVISMTKAFAKECAPFGIRVNALLPGLTDT 193

Length = 252

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 55/209 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG  +A      GA V +  R                 + +   F        
Sbjct: 11  VTGGTRGIGAGIARAFLAAGATVVVCGRRAP-----------ETVDGRPAEFH------- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A               D+ +D + + + +   ++R G + +LVN AG +      E + +
Sbjct: 53  AA--------------DV-RDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPR 97

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITASQ 281
                        +H +        +++LNL   + + +A    M +Q G G IV   S 
Sbjct: 98  -------------FHEK--------IVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSV 136

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME 310
           +      G AAY ++K  L     +L +E
Sbjct: 137 SGRRPSPGTAAYGAAKAGLLNLTRSLAVE 165

Length = 252

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 8/55 (14%)

Query: 88  LQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI 142
           LQ K  L        +TGG+SGIG   A +    GA V I  RD   L  A+ E+
Sbjct: 4   LQGKTAL--------ITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL 50

Length = 249

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 42.1 bits (99), Expect = 5e-04
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 249 IDLNLYGTIHMTKALVEGMKQRGRGC-IVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
             +NL G   + +  +  M ++G G  IV  AS A  + +    AY++SK A+     +L
Sbjct: 109 QAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSL 168

Query: 308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQT---GGLYRPE 355
             E    G+ +   LP    T      E++   + S +      G L RPE
Sbjct: 169 ACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPE 219

Length = 520

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 40.5 bits (96), Expect = 5e-04
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 23/123 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           +TGG  G+G+ +A   A+RGA  + +++R       A   +                E++
Sbjct: 5   ITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALL---------------AELE 49

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
            A         +  V+ D++ D + + + L       GP+  +++ AG+   G L  +T 
Sbjct: 50  AA------GARVTVVACDVA-DRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTP 102

Query: 222 QDI 224
           +  
Sbjct: 103 ERF 105

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 41.2 bits (97), Expect = 7e-04
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           VTGG+  +G+H+     + G  V ++ R E  L +A E I++A      +R +E
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSE-SLGEAHERIEEAGLEADRVRVLE 55

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 40.7 bits (95), Expect = 9e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL 135
           VTG +  +G  V  E   RG  V    R+ +  
Sbjct: 5   VTGATGFVGGAVVRELLARGHEVRAAVRNPEAA 37

Length = 275

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 18/48 (37%), Positives = 24/48 (50%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPK 150
           VTG S G+G  +A   A  GA V +  R+  K   A   I+ A P+ K
Sbjct: 19  VTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAK 66

Length = 313

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 63/232 (27%), Positives = 94/232 (40%), Gaps = 52/232 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG   A+ AA+RG  V +     +    A E + +A      IR    E +  
Sbjct: 7   ITGASRGIGAATALLAAERGYAVCLNYLRNR---DAAEAVVQA------IRRQGGEALA- 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDR-CGPVYMLVNCAGMALCGTLE-EMT 220
                        V+ D++ + + +R  L  A+DR  G +  LVN AG+     LE +M 
Sbjct: 57  -------------VAADVADEADVLR--LFEAVDRELGRLDALVNNAGI-----LEAQMR 96

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR--GR-GCIVI 277
           ++    M+     R + T             N+ G+    +  V+ M  R  GR G IV 
Sbjct: 97  LEQ---MDAARLTRIFAT-------------NVVGSFLCAREAVKRMSTRHGGRGGAIVN 140

Query: 278 TASQAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
            +S AA LG  G    Y +SK A+      L  EV   G+ +    P    T
Sbjct: 141 VSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYT 192

Length = 248

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI 142
           +TG S+GIGK VA+   + GA V I AR    L +  +EI
Sbjct: 14  ITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI 53

Length = 253

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 43/198 (21%), Positives = 72/198 (36%), Gaps = 47/198 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG  +GIGK +AI  A  GA V +   +        +EI++             +    
Sbjct: 16  ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG----------QAFAC 65

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              DI+   + + +    A+ + G V +LVN AG    G  +   M 
Sbjct: 66  RC--------------DIT-SEQELSALADFALSKLGKVDILVNNAG---GGGPKPFDMP 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M                      +LN++   H+++ +   M++ G G I+   S A
Sbjct: 108 ----MADFRR---------------AYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMA 148

Query: 283 ANLGIYGLAAYTSSKFAL 300
           A      + +Y SSK A 
Sbjct: 149 AENKNINMTSYASSKAAA 166

Length = 255

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 55/275 (20%), Positives = 93/275 (33%), Gaps = 78/275 (28%)

Query: 102 SVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
            +TGG SG+G+ + +E     GA V ++ R  +K+ + + +   A               
Sbjct: 8   LITGGGSGLGRAL-VERFVAEGAKVAVLDRSAEKVAELRADFGDA--------------- 51

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-----ALCGT 215
                       +  V  D+     +   A+   ++R G +   +  AG+     +L   
Sbjct: 52  ------------VVGVEGDVR-SLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDI 98

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
            EE      K+ E       +           +  +N+ G I   KA +  +     G +
Sbjct: 99  PEE------KLDE------AFDE---------LFHINVKGYILGAKAALPALYA-TEGSV 136

Query: 276 VITASQAANLGIY---GLAAYTSSKFALKGFAEALYME---------VKQSGLTITLCLP 323
           + T S   N G Y   G   YT+SK A+ G  + L  E         V   G+   L  P
Sbjct: 137 IFTVS---NAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPHIRVNGVAPGGMVTDLRGP 193

Query: 324 PDTDTPGFENEEKSKPRETSLISQ---TGGLYRPE 355
               + G      S P    ++      G    PE
Sbjct: 194 A---SLGQGETSISTPPLDDMLKSILPLGFAPEPE 225

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKK 144
           VTG S GIG+ +A++  + GA V I  R    +L    EEI+ 
Sbjct: 8   VTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEA 50

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 39.2 bits (92), Expect = 0.004
 Identities = 20/47 (42%), Positives = 28/47 (59%)

Query: 96  PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI 142
              GT+ +TG SSG+G + A   AKRG HV +  R+ KK   A +E+
Sbjct: 4   DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL 50

Length = 322

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 39.6 bits (93), Expect = 0.004
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFI 155
           T  T+ VTGG   IG  +  +  K     + + +RDE KL     E+++  P  K   +I
Sbjct: 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYI 308

Length = 588

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 13/49 (26%), Positives = 20/49 (40%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKF 151
           VTG +  I  H+  +  K G  V    R   K  + +  +K A  N + 
Sbjct: 4   VTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRL 52

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 38.7 bits (90), Expect = 0.004
 Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 49/222 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG ++G+G+ +AI  AK GA +  V   E    QAQ E                     
Sbjct: 13  ITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE--------------------- 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                   R   +++ D+ +  ++I S +  A++  G + +L+N AG+     L E   +
Sbjct: 52  -----ALGRKFHFITADLIQQ-KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNK 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALV-EGMKQRGRGCIVITASQ 281
           D                   W    VI++N      +++A+  + +KQ   G I+  AS 
Sbjct: 106 D-------------------WDD--VININQKTVFFLSQAVAKQFVKQGNGGKIINIASM 144

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            +  G   + +YT+SK A+ G   AL  E+ Q  + +    P
Sbjct: 145 LSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAP 186

Length = 251

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 29/111 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG SG+G       A+ GAHV + AR      +A   I                    
Sbjct: 31  VTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG------------------ 72

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
                     +E V LD++ D E++R+  +  +D    + +L+N AG+  C
Sbjct: 73  ----------VEVVMLDLA-DLESVRAFAERFLDSGRRIDILINNAGVMAC 112

Length = 315

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 54/245 (22%), Positives = 81/245 (33%), Gaps = 80/245 (32%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
            + + G +S I +  A   A  GA + + ARD ++L +  ++++                
Sbjct: 3   KILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLR---------------- 46

Query: 160 IKKACPNPKFIRF---IEYVSLDISKDYENIRSALQPAM-DRCGPVYMLVNCA-GMALCG 214
                      R    +    LDI  D  +       A  D    +  +V  A G     
Sbjct: 47  ----------ARGAVAVSTHELDIL-DTASH-----AAFLDSLPALPDIVLIAVG----- 85

Query: 215 TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC 274
                T+ D    E           LAL         N  G I +   L    + RG G 
Sbjct: 86  -----TLGDQAACEADP-------ALAL----REFRTNFEGPIALLTLLANRFEARGSGT 129

Query: 275 IVITASQAANLG-----IYGLAAYTSSKFALKGFAEALYMEVKQSG---LTITLCLPPDT 326
           IV  +S A + G     +YG     S+K AL  F   L   + +SG   LT+        
Sbjct: 130 IVGISSVAGDRGRASNYVYG-----SAKAALTAFLSGLRNRLFKSGVHVLTV-------- 176

Query: 327 DTPGF 331
             PGF
Sbjct: 177 -KPGF 180

Length = 243

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	475
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1210|consensus	331		100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1201|consensus	300		100.0
KOG1205|consensus	282		100.0
KOG1200|consensus	256		100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725|consensus	270		100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
KOG4169|consensus	261		100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
KOG1207|consensus	245		100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
KOG1610|consensus	322		100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
KOG1209|consensus	289		100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
KOG1014|consensus	312		100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
KOG1208|consensus	314		100.0
PRK06057	255	short chain dehydrogenase; Provisional	99.98
PLN00015	308	protochlorophyllide reductase	99.98
PRK06123	248	short chain dehydrogenase; Provisional	99.98
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.98
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.98
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.98
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.98
PRK05875	276	short chain dehydrogenase; Provisional	99.98
PRK07774	250	short chain dehydrogenase; Provisional	99.97
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06198	260	short chain dehydrogenase; Provisional	99.97
PRK09134	258	short chain dehydrogenase; Provisional	99.97
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.97
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.97
PRK06197	306	short chain dehydrogenase; Provisional	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK05884	223	short chain dehydrogenase; Provisional	99.97
PRK10538	248	malonic semialdehyde reductase; Provisional	99.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.97
PRK12827	249	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK07060	245	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
KOG1199|consensus	260		99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
KOG1611|consensus	249		99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.96
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK07806	248	short chain dehydrogenase; Provisional	99.96
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.96
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.96
PRK07041	230	short chain dehydrogenase; Provisional	99.96
PRK09135	249	pteridine reductase; Provisional	99.96
PRK12829	264	short chain dehydrogenase; Provisional	99.96
PRK08324	681	short chain dehydrogenase; Validated	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
PRK08177	225	short chain dehydrogenase; Provisional	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
PRK06953	222	short chain dehydrogenase; Provisional	99.94
PRK08219	227	short chain dehydrogenase; Provisional	99.94
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.93
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.93
KOG1204|consensus	253		99.92
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.91
KOG1478|consensus	341		99.9
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PLN03209	576	translocon at the inner envelope of chloroplast su	99.86
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.84
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.83
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.83
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.82
PLN02583	297	cinnamoyl-CoA reductase	99.81
PRK06720	169	hypothetical protein; Provisional	99.79
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.77
PLN02653	340	GDP-mannose 4,6-dehydratase	99.77
PLN02214	342	cinnamoyl-CoA reductase	99.76
PLN02572	442	UDP-sulfoquinovose synthase	99.75
KOG1502|consensus	327		99.75
PLN02650	351	dihydroflavonol-4-reductase	99.74
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.74
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.73
PLN00198	338	anthocyanidin reductase; Provisional	99.73
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.73
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.73
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.71
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.7
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.69
PLN02686	367	cinnamoyl-CoA reductase	99.68
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.68
PLN02240	352	UDP-glucose 4-epimerase	99.68
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.67
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.65
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.64
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.63
PLN02427	386	UDP-apiose/xylose synthase	99.62
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.62
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.6
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.59
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.55
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.54
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.53
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.52
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.5
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.5
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.49
CHL00194	317	ycf39 Ycf39; Provisional	99.48
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.47
PLN02206	442	UDP-glucuronate decarboxylase	99.47
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.47
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.47
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.44
PLN02260	668	probable rhamnose biosynthetic enzyme	99.44
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.42
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.42
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.38
KOG1371|consensus	343		99.34
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.34
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.33
PRK07201	657	short chain dehydrogenase; Provisional	99.32
PRK05865	854	hypothetical protein; Provisional	99.31
PLN02996	491	fatty acyl-CoA reductase	99.26
PRK08309	177	short chain dehydrogenase; Provisional	99.24
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.23
KOG1430|consensus	361		99.15
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.13
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.13
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.1
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.07
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.05
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.01
PLN02503	605	fatty acyl-CoA reductase 2	98.99
KOG4022|consensus	236		98.98
PLN02778	298	3,5-epimerase/4-reductase	98.96
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.96
KOG1429|consensus	350		98.95
PLN00016	378	RNA-binding protein; Provisional	98.95
KOG0747|consensus	331		98.79
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.77
PLN02260	668	probable rhamnose biosynthetic enzyme	98.76
PRK12320	699	hypothetical protein; Provisional	98.74
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.72
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.64
KOG2865|consensus	391		98.54
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.54
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.53
KOG1202|consensus	2376		98.52
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.43
KOG1221|consensus	467		98.43
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.42
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.38
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.31
COG2910	211	Putative NADH-flavin reductase [General function p	98.28
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.28
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.17
KOG1203|consensus	411		98.07
KOG1431|consensus	315		97.98
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.89
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.87
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.86
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.78
PRK09620	229	hypothetical protein; Provisional	97.7
PRK14982	340	acyl-ACP reductase; Provisional	97.66
KOG2774|consensus	366		97.62
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.58
KOG2733|consensus	423		97.55
PLN00106	323	malate dehydrogenase	97.55
KOG1372|consensus	376		97.43
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.34
PTZ00325	321	malate dehydrogenase; Provisional	97.3
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.29
KOG4039|consensus	238		97.22
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.21
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.19
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.18
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.02
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.97
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.94
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.93
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.89
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.85
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.79
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.73
PRK06849	389	hypothetical protein; Provisional	96.73
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.72
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.71
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.67
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.66
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.65
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.63
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.63
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.62
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.57
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.55
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.55
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.53
PRK05086	312	malate dehydrogenase; Provisional	96.52
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.5
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.45
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.42
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.42
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.4
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.38
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.37
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.37
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.36
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.36
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.35
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.31
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.29
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.28
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.24
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.19
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.11
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.04
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.04
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.01
COG3268	382	Uncharacterized conserved protein [Function unknow	96.0
KOG4288|consensus	283		95.88
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.86
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.84
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.81
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.8
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	95.77
PRK14968	188	putative methyltransferase; Provisional	95.75
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.74
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.71
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.71
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.67
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.66
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.64
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.63
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.54
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.53
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.52
PRK08223	287	hypothetical protein; Validated	95.51
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.48
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.47
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.47
KOG1198|consensus	347		95.47
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.46
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.41
PLN00203	519	glutamyl-tRNA reductase	95.4
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.39
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.28
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.24
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.14
PRK08328	231	hypothetical protein; Provisional	95.08
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.04
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.03
PRK09496	453	trkA potassium transporter peripheral membrane com	95.01
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	94.91
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.85
PRK14851	679	hypothetical protein; Provisional	94.79
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.79
PTZ00117	319	malate dehydrogenase; Provisional	94.77
KOG0023|consensus	360		94.73
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.72
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.69
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.66
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.63
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	94.58
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.57
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	94.52
PRK04148	134	hypothetical protein; Provisional	94.49
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.36
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.32
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.3
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.28
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.26
PRK07411	390	hypothetical protein; Validated	94.23
COG0569	225	TrkA K+ transport systems, NAD-binding component [	94.23
PRK07877	722	hypothetical protein; Provisional	94.21
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.19
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.15
PLN02740	381	Alcohol dehydrogenase-like	94.12
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.11
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.09
PRK14852	989	hypothetical protein; Provisional	94.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	93.99
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	93.98
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	93.94
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	93.92
PTZ00354	334	alcohol dehydrogenase; Provisional	93.88
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	93.87
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	93.87
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	93.85
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	93.85
PRK05442	326	malate dehydrogenase; Provisional	93.76
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	93.76
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	93.76
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	93.74
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	93.73
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	93.72
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.69
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	93.68
PLN02586	360	probable cinnamyl alcohol dehydrogenase	93.67
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	93.62
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	93.6
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	93.55
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.54
PLN02602	350	lactate dehydrogenase	93.5
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.5
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	93.48
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	93.47
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	93.45
PRK09496	453	trkA potassium transporter peripheral membrane com	93.43
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	93.43
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	93.42
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.4
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.39
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	93.34
PLN02178	375	cinnamyl-alcohol dehydrogenase	93.33
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.28
PRK06223	307	malate dehydrogenase; Reviewed	93.27
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	93.27
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.27
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	93.23
COG2130	340	Putative NADP-dependent oxidoreductases [General f	93.11
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	93.06
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.05
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	93.02
PLN02827	378	Alcohol dehydrogenase-like	93.02
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	93.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	92.94
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.89
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	92.89
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	92.85
PRK13771	334	putative alcohol dehydrogenase; Provisional	92.84
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	92.82
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	92.82
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	92.72
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	92.63
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	92.61
PRK08655	437	prephenate dehydrogenase; Provisional	92.54
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	92.47
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	92.33
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	92.31
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	92.3
PRK12480	330	D-lactate dehydrogenase; Provisional	92.26
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	92.25
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	92.22
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	92.12
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	92.11
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.02
KOG1196|consensus	343		92.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	92.0
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.92
PRK13243	333	glyoxylate reductase; Reviewed	91.83
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	91.79
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	91.74

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=5.7e-45  Score=352.64  Aligned_cols=246  Identities=32%  Similarity=0.413  Sum_probs=217.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++++++||||||+|||+++|+.|+++|++|++++|++++|++++++|...+.                       .+++
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~-----------------------v~v~   59 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG-----------------------VEVE   59 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC-----------------------ceEE
Confidence            35688999999999999999999999999999999999999999999998764                       6789


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.+++..+.+++.++.+.||+||||||+...+++.+.+.++.+.+                     +++|+.
T Consensus        60 vi~~DLs-~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~m---------------------i~lN~~  117 (265)
T COG0300          60 VIPADLS-DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEM---------------------IQLNIL  117 (265)
T ss_pred             EEECcCC-ChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHH---------------------HHHHHH
Confidence            9999999 999999999999999999999999999999999999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +...++++++|.|.+++.|+||||+|.+|+.+.|..+.|++||+++.+|+++|+.||.++||+|.+|+||+|.|++++ .
T Consensus       118 a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~  196 (265)
T COG0300         118 ALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A  196 (265)
T ss_pred             HHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999876 2


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g  414 (475)
                      .... .                                                ...+.....++||+||+.++.++.++
T Consensus       197 ~~~~-~------------------------------------------------~~~~~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         197 KGSD-V------------------------------------------------YLLSPGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             cccc-c------------------------------------------------ccccchhhccCHHHHHHHHHHHHhcC
Confidence            1100 0                                                00001223789999999999999999


Q ss_pred             CeeEEeCchhHHHHHHhcCCcc
Q psy3252         415 NYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      +..+++|. .+........+.|
T Consensus       228 k~~ii~~~-~~~~~~~~~~~~~  248 (265)
T COG0300         228 KREIIPGL-PNKALALSFRLLP  248 (265)
T ss_pred             CceEecCh-hhHHHHHHHHHhH
Confidence            99999984 3333333434555

>KOG1210|consensus

Probab=100.00  E-value=5.1e-43  Score=338.74  Aligned_cols=286  Identities=37%  Similarity=0.664  Sum_probs=272.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++++|||||+|||+++|.++..+|++|.++.|+.+++.++++++.-....                      ..+.+..+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~----------------------~~v~~~S~   91 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV----------------------EDVSYKSV   91 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc----------------------ceeeEecc
Confidence            58999999999999999999999999999999999999999988654321                      23779999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |+. |.+++..+++++.+.++.+|.||||||...++.+.+.+.++++.+                     |+||++|+++
T Consensus        92 d~~-~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~---------------------m~vNylgt~~  149 (331)
T KOG1210|consen   92 DVI-DYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKL---------------------MDVNYLGTVN  149 (331)
T ss_pred             ccc-cHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHH---------------------HHhhhhhhHH
Confidence            998 999999999999999999999999999999999999999999988                     9999999999


Q ss_pred             HHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         259 MTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       259 l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      ++++.++.|++.. .|+|+.+||.++..+.+|+++|++||+|+.+|+.+|++|+.++||+|..+.|+.+.||        
T Consensus       150 v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tp--------  221 (331)
T KOG1210|consen  150 VAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTP--------  221 (331)
T ss_pred             HHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCC--------
Confidence            9999999999876 5899999999999999999999999999999999999999999999999999999999        


Q ss_pred             CccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCee
Q psy3252         338 KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYF  417 (475)
Q Consensus       338 ~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~~  417 (475)
                                                            ||+.|++.+|..++.|.++...+.+|++|++++.++.+|++.
T Consensus       222 --------------------------------------GfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg~f~  263 (331)
T KOG1210|consen  222 --------------------------------------GFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKRGNFT  263 (331)
T ss_pred             --------------------------------------ccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhhcCeE
Confidence                                                  889999999999999999999999999999999999999999


Q ss_pred             EEeCchhHHHHHHhcCCcchhhHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHhh
Q psy3252         418 STVGLESYLITTLCAGFSPIVSIQETFIQAFLMGPLRLTAIYLHWTFDNIVKKCRKS  474 (475)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~  474 (475)
                      +..+..+|++..+..+.+|..++...+++++..++.|+++++++|.|+..+++|+++
T Consensus       264 ~~~~~~g~l~s~~~~~~~p~~~~~~~~l~~i~~~l~Rl~~l~y~~~~~~~irk~~~e  320 (331)
T KOG1210|consen  264 VSLGFTGFLLSILSQGMSPGDSFSLALLHVIVGGLSRLVSLFYQWKFNTSIRKCVSE  320 (331)
T ss_pred             EeechHHHHHHHhhcCCCcchhHHHHHHHHHHhhhhhheeeeeeeehhhHHhHHhhh
Confidence            999999999999999999999999999999999999999999999999999998865

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=8.4e-43  Score=328.82  Aligned_cols=192  Identities=31%  Similarity=0.439  Sum_probs=182.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+++|+++|||||+|||.++|++|+++|++|++++|+.++++++++++.+                          ..+.
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--------------------------~~~~   56 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--------------------------GAAL   56 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--------------------------CceE
Confidence            46789999999999999999999999999999999999999999998864                          3478


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      .+.+||+ |.++++++++.+.++|++||+||||||.....++.+.+.++|+.|                     +++|+.
T Consensus        57 ~~~~DVt-D~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~M---------------------id~Ni~  114 (246)
T COG4221          57 ALALDVT-DRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRM---------------------IDTNVK  114 (246)
T ss_pred             EEeeccC-CHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHH---------------------HHHHHH
Confidence            8999999 999999999999999999999999999998899999999999999                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |.++.+++++|.|.+++.|+|||+||++|..++|+.+.||+||+|+..|++.|+.|+.+++|||++|+||.|.|..+...
T Consensus       115 G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v  194 (246)
T COG4221         115 GLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTV  194 (246)
T ss_pred             HHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988755543

>KOG1201|consensus

Probab=100.00  E-value=3.1e-42  Score=333.02  Aligned_cols=246  Identities=31%  Similarity=0.392  Sum_probs=223.4

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.-+++|++||||||++|||+++|.+|+++|++++++|.|.+..++..+++++.                         +
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-------------------------g   86 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-------------------------G   86 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-------------------------C
Confidence            456788999999999999999999999999999999999999999999988765                         3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +++.+.||++ +.+++.+..+++++++|.||+||||||+....++.+.+.++++++                     ++|
T Consensus        87 ~~~~y~cdis-~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~---------------------~~v  144 (300)
T KOG1201|consen   87 EAKAYTCDIS-DREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKT---------------------FDV  144 (300)
T ss_pred             ceeEEEecCC-CHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHH---------------------HHH
Confidence            5789999999 999999999999999999999999999999999999999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc---cCCcEEEEEeCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK---QSGLTITLCLPPDTDT  328 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~---~~gIrVn~V~PG~v~T  328 (475)
                      |+.|+|+.+|+|+|.|.+.+.|+||+|+|++|..+.++..+||+||+|+.+|.++|..|+.   ..||+.+.|||++++|
T Consensus       145 N~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~T  224 (300)
T KOG1201|consen  145 NTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINT  224 (300)
T ss_pred             hhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccc
Confidence            9999999999999999999999999999999999999999999999999999999999985   4679999999999999


Q ss_pred             CCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHH
Q psy3252         329 PGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLL  408 (475)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~  408 (475)
                      .|++...+ .                                                     +...+.++|+.||+.|+
T Consensus       225 gmf~~~~~-~-----------------------------------------------------~~l~P~L~p~~va~~Iv  250 (300)
T KOG1201|consen  225 GMFDGATP-F-----------------------------------------------------PTLAPLLEPEYVAKRIV  250 (300)
T ss_pred             cccCCCCC-C-----------------------------------------------------ccccCCCCHHHHHHHHH
Confidence            98775110 0                                                     01124789999999999


Q ss_pred             HHHhcCCeeEEeCchhHHHHHHhcCCcchhh
Q psy3252         409 EDALKGNYFSTVGLESYLITTLCAGFSPIVS  439 (475)
Q Consensus       409 ~ai~~g~~~~~~~~~~~~~~~~~~~~~P~~~  439 (475)
                      ++++.++..+.+++...++..+. +++|..+
T Consensus       251 ~ai~~n~~~~~~P~~~~~~~~l~-~~lP~~~  280 (300)
T KOG1201|consen  251 EAILTNQAGLLIPPFYYLFVPLL-RLLPYKA  280 (300)
T ss_pred             HHHHcCCcccccHHHHHHHHHHH-hhCCHHH
Confidence            99999999999988888877765 8889654

>KOG1205|consensus

Probab=100.00  E-value=2.3e-42  Score=336.92  Aligned_cols=199  Identities=35%  Similarity=0.497  Sum_probs=184.1

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ..+..+.||+|+|||||+|||+++|.+|+++|++++++.|+.++++.+.+++++.++.                      
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~----------------------   62 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSL----------------------   62 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCc----------------------
Confidence            3456788999999999999999999999999999999999999999999999988752                      


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++++++|||+ |.++++++++++...||++|+||||||+......++.+.++++.+                     |+
T Consensus        63 ~~v~~~~~Dvs-~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~---------------------md  120 (282)
T KOG1205|consen   63 EKVLVLQLDVS-DEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNV---------------------MD  120 (282)
T ss_pred             CccEEEeCccC-CHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHH---------------------hh
Confidence            25899999999 999999999999999999999999999998777777888888877                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCC--cEEEEEeCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSG--LTITLCLPPDTDT  328 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~g--IrVn~V~PG~v~T  328 (475)
                      +|++|+++|+++++|+|++++.|+||+|||++|..+.|..+.|+|||+|+.+|+++|+.|+.+.+  |++ +|+||+|+|
T Consensus       121 tN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~T  199 (282)
T KOG1205|consen  121 TNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIET  199 (282)
T ss_pred             hhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceee
Confidence            99999999999999999999899999999999999999999999999999999999999999987  566 999999999


Q ss_pred             CCCccc
Q psy3252         329 PGFENE  334 (475)
Q Consensus       329 ~~~~~~  334 (475)
                      ++....
T Consensus       200 e~~~~~  205 (282)
T KOG1205|consen  200 EFTGKE  205 (282)
T ss_pred             cccchh
Confidence            976643

>KOG1200|consensus

Probab=100.00  E-value=5e-43  Score=315.99  Aligned_cols=233  Identities=25%  Similarity=0.312  Sum_probs=209.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++.|+++||||++|||+++++.|+++|++|++++++.+..++++..|...                         .....
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-------------------------~~h~a   66 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-------------------------GDHSA   66 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-------------------------Cccce
Confidence            45789999999999999999999999999999999998888877766542                         23456


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.|||+ +..+++..+++..+.+|++++||||||+.....+..+..++|+.+                     +.+|+.|
T Consensus        67 F~~DVS-~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~v---------------------i~vNL~g  124 (256)
T KOG1200|consen   67 FSCDVS-KAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSV---------------------IAVNLTG  124 (256)
T ss_pred             eeeccC-cHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHH---------------------HHhhchh
Confidence            899999 999999999999999999999999999999989999999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHh--CCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         256 TIHMTKALVEGMKQ--RGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       256 ~~~l~~~~lp~m~~--~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++|++...|..  ++.++|||+||+.|..++.++..|++||+++.+|++++|+|++.+|||||+|+||+|.|||.+.
T Consensus       125 vfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~  204 (256)
T KOG1200|consen  125 VFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEA  204 (256)
T ss_pred             hHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhh
Confidence            99999999998543  3345999999999999999999999999999999999999999999999999999999999888


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .++.....--...|+||++++||||+.  ++||.++..++++|-
T Consensus       205 mp~~v~~ki~~~iPmgr~G~~EevA~~--V~fLAS~~ssYiTG~  246 (256)
T KOG1200|consen  205 MPPKVLDKILGMIPMGRLGEAEEVANL--VLFLASDASSYITGT  246 (256)
T ss_pred             cCHHHHHHHHccCCccccCCHHHHHHH--HHHHhccccccccce
Confidence            776655544456799999999999975  677889999999884

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-40  Score=321.72  Aligned_cols=236  Identities=24%  Similarity=0.300  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+                       .++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~   60 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN-----------------------VDV   60 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----------------------Cce
Confidence            357899999999999999999999999999999999999988888877765321                       467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++. ++|++|+||||||.....++.+.+.++|+.+                     +++|+
T Consensus        61 ~~~~~Dv~-~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~---------------------~~~n~  117 (263)
T PRK08339         61 SYIVADLT-KREDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGA---------------------VKLLL  117 (263)
T ss_pred             EEEEecCC-CHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHHh
Confidence            88999999 9999999999985 5899999999999877777888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .++++++++++|.|++++.|+||++||.++..+.++...|+++|+|+.+|+++|+.|++++|||||+|+||+|+|++...
T Consensus       118 ~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  197 (263)
T PRK08339        118 YPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQ  197 (263)
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHH
Confidence            99999999999999988889999999999999999999999999999999999999999999999999999999997643


Q ss_pred             cccC---------Cc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKS---------KP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~---------~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ....         ..  .......|++|++.||||+++.  +|++++...+++|-
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v--~fL~s~~~~~itG~  250 (263)
T PRK08339        198 LAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLV--AFLASDLGSYINGA  250 (263)
T ss_pred             HHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHH--HHHhcchhcCccCc
Confidence            2110         00  0111235789999999999975  45667767777763

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-38  Score=321.54  Aligned_cols=247  Identities=28%  Similarity=0.394  Sum_probs=215.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++.+|++||||||+|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g------------------------~~~   58 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG------------------------AEV   58 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcE
Confidence            45778999999999999999999999999999999999999999888887543                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+.+|++|++|||||+...+++.+.+.++++++                     +++|+
T Consensus        59 ~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~---------------------~~vN~  116 (330)
T PRK06139         59 LVVPTDVT-DADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQV---------------------IQTNL  116 (330)
T ss_pred             EEEEeeCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHhhh
Confidence            78899999 999999999999999999999999999988888889999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccC-CcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQS-GLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~-gIrVn~V~PG~v~T~~~~  332 (475)
                      .|++++++.++|.|.+++.|+||++||..+..+.|+.+.|++||+|+.+|+++|+.|+.++ ||+|++|+||.|+||++.
T Consensus       117 ~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~  196 (330)
T PRK06139        117 IGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFR  196 (330)
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccc
Confidence            9999999999999999888999999999999999999999999999999999999999875 999999999999999764


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~  412 (475)
                      ......                                     +   . .        .......++||+||+.++.+++
T Consensus       197 ~~~~~~-------------------------------------~---~-~--------~~~~~~~~~pe~vA~~il~~~~  227 (330)
T PRK06139        197 HGANYT-------------------------------------G---R-R--------LTPPPPVYDPRRVAKAVVRLAD  227 (330)
T ss_pred             cccccc-------------------------------------c---c-c--------ccCCCCCCCHHHHHHHHHHHHh
Confidence            321000                                     0   0 0        0001236799999999999999


Q ss_pred             cCCeeEEeCchhHHHHHHhcCCcc
Q psy3252         413 KGNYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       413 ~g~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      +++..+++|...+++.. ..+++|
T Consensus       228 ~~~~~~~~g~~~~~~~~-~~~~~P  250 (330)
T PRK06139        228 RPRATTTVGAAARLARL-AHFLAP  250 (330)
T ss_pred             CCCCEEEcChHHHHHHH-HHHhCc
Confidence            99999999987766544 557888

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.2e-39  Score=315.74  Aligned_cols=231  Identities=12%  Similarity=0.097  Sum_probs=190.4

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++||++|||||++  |||+++|++|+++|++|++++|+....+. .+++.+..                        ...
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~------------------------g~~   59 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL------------------------GSD   59 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc------------------------CCc
Confidence            6799999999996  99999999999999999999998644333 23332221                        112


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      .++++|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++|+++                     +
T Consensus        60 ~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~---------------------~  117 (271)
T PRK06505         60 FVLPCDVE-DIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRT---------------------M  117 (271)
T ss_pred             eEEeCCCC-CHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHH---------------------H
Confidence            46899999 9999999999999999999999999998643    46678889999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.++++++++++|+|.+  +|+||++||.++..+.+++.+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+
T Consensus       118 ~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~  195 (271)
T PRK06505        118 VISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL  195 (271)
T ss_pred             hhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence            99999999999999999974  4899999999998899999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         330 GFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       330 ~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +.........  .......|++|+++||||+++.  +|++++...+++|-
T Consensus       196 ~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~--~fL~s~~~~~itG~  243 (271)
T PRK06505        196 AGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSA--LYLLSDLSSGVTGE  243 (271)
T ss_pred             ccccCcchHHHHHHHhhcCCccccCCHHHHHHHH--HHHhCccccccCce
Confidence            7643211100  1111234789999999999985  45677777777763

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-38  Score=309.20  Aligned_cols=233  Identities=22%  Similarity=0.284  Sum_probs=197.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+..  ++..+++.+.+                        .++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~------------------------~~~   57 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALG------------------------RKF   57 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcC------------------------CeE
Confidence            4678999999999999999999999999999999998642  33344443322                        467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.++++++++++.+.+|++|+||||||+....++.+.+.++|+.+                     +++|+
T Consensus        58 ~~~~~Dl~-~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~vN~  115 (251)
T PRK12481         58 HFITADLI-QQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDV---------------------ININQ  115 (251)
T ss_pred             EEEEeCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------heeCc
Confidence            88999999 999999999999999999999999999987777888899999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .++++++++++|.|.+++ .|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus       116 ~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~  195 (251)
T PRK12481        116 KTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTA  195 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchh
Confidence            999999999999998765 5899999999999998899999999999999999999999999999999999999999876


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........  ......|.+|+++||||+++.+  |++++....++|
T Consensus       196 ~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~--~L~s~~~~~~~G  239 (251)
T PRK12481        196 ALRADTARNEAILERIPASRWGTPDDLAGPAI--FLSSSASDYVTG  239 (251)
T ss_pred             hcccChHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCccccCcCC
Confidence            54221111  1112347889999999998754  566776677766

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-38  Score=311.39  Aligned_cols=228  Identities=17%  Similarity=0.164  Sum_probs=190.8

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++..                          .++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~--------------------------~~~   57 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD--------------------------EED   57 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc--------------------------Cce
Confidence            679999999999  8999999999999999999999984 34333333311                          346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      .++++|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++|+.+                     +
T Consensus        58 ~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~---------------------~  115 (252)
T PRK06079         58 LLVECDVA-SDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALA---------------------Q  115 (252)
T ss_pred             eEEeCCCC-CHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHH---------------------h
Confidence            78999999 9999999999999999999999999998643    56778899999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.++++++++++|.|.+  .|+||++||.++..+.+++.+|++||+|+.+|+++|+.|++++||+||+|+||.|+|+
T Consensus       116 ~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~  193 (252)
T PRK06079        116 DISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL  193 (252)
T ss_pred             CcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence            99999999999999999964  4899999999999888999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +.........  .......|++|+++||||+++.+  |++++...+++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~--~l~s~~~~~itG  240 (252)
T PRK06079        194 AVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAA--FLLSDLSTGVTG  240 (252)
T ss_pred             ccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHH--HHhCcccccccc
Confidence            7654321111  11122347899999999998754  456666666665

>KOG0725|consensus

Probab=100.00  E-value=5.5e-38  Score=309.10  Aligned_cols=240  Identities=24%  Similarity=0.236  Sum_probs=203.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ...+.||+++||||++|||+++|++|++.|++|++++|+++.+++...++...+..                     ..+
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~---------------------~~~   61 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYT---------------------GGK   61 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC---------------------CCe
Confidence            46788999999999999999999999999999999999999999998888765532                     157


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHh-cCCccEEEEccccccCC-CcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDR-CGPVYMLVNCAGMALCG-TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~-~g~IDvLVnnAG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      +..+.||++ +.++++++++...++ +|+||+||||||..... ++.+.+.++|+++                     ++
T Consensus        62 ~~~~~~Dv~-~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~---------------------~~  119 (270)
T KOG0725|consen   62 VLAIVCDVS-KEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKI---------------------MA  119 (270)
T ss_pred             eEEEECcCC-CHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHH---------------------Hh
Confidence            899999999 999999999999999 79999999999998764 7899999999988                     99


Q ss_pred             hhHHH-HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC-hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         251 LNLYG-TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL-AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       251 vN~~g-~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~-~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +|+.| .+.+.+.+.+++.+++.|+|+++||.++..+.++. .+|++||+|+++|+|+||.||+++|||||+|+||.|.|
T Consensus       120 ~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T  199 (270)
T KOG0725|consen  120 TNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKT  199 (270)
T ss_pred             hhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeC
Confidence            99995 66666777777777788999999999998876666 79999999999999999999999999999999999999


Q ss_pred             CCCcccccC---Cccc----cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         329 PGFENEEKS---KPRE----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~---~~~~----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ++.......   ....    .....|+||+++|+||+.+  ..|++++..++++|-
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~--~~fla~~~asyitG~  253 (270)
T KOG0725|consen  200 SLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEA--AAFLASDDASYITGQ  253 (270)
T ss_pred             CccccccccchhhHHhhhhccccccccCCccCHHHHHHh--HHhhcCcccccccCC
Confidence            971111111   1111    2234589999999999986  567888877777763

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-38  Score=313.68  Aligned_cols=232  Identities=16%  Similarity=0.159  Sum_probs=190.6

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++||++|||||+  +|||+++|++|+++|++|++++|+.+ +++..+++.+..+                       ..
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-----------------------~~   57 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-----------------------SD   57 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-----------------------Cc
Confidence            4679999999997  89999999999999999999999853 2333333332221                       22


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                       .++++|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++|+++                     
T Consensus        58 -~~~~~Dv~-d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~---------------------  114 (274)
T PRK08415         58 -YVYELDVS-KPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIA---------------------  114 (274)
T ss_pred             -eEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHH---------------------
Confidence             56899999 9999999999999999999999999998642    56778899999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|++++++.++|.|.+  .|+||++||.++..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||+|+|
T Consensus       115 ~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T  192 (274)
T PRK08415        115 MEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKT  192 (274)
T ss_pred             hhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccc
Confidence            999999999999999999975  389999999999988999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         329 PGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ++.........  .......|++|+++||||+++.  +|++++...+++|-
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v--~fL~s~~~~~itG~  241 (274)
T PRK08415        193 LAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSG--MYLLSDLSSGVTGE  241 (274)
T ss_pred             HHHhccchhhHHhhhhhhhCchhccCCHHHHHHHH--HHHhhhhhhccccc
Confidence            87543211110  0111235789999999999875  55666666676663

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-37  Score=305.32  Aligned_cols=246  Identities=26%  Similarity=0.359  Sum_probs=204.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+                        .++
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~------------------------~~~   57 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEG------------------------FDV   57 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CeE
Confidence            34779999999999999999999999999999999999988888877776433                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++++.+.+|++|+||||||+...+++.+.+.++++.+                     +++|+
T Consensus        58 ~~~~~Dv~-d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~  115 (275)
T PRK05876         58 HGVMCDVR-HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWV---------------------IDVDL  115 (275)
T ss_pred             EEEeCCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------Hhhhh
Confidence            88999999 999999999999999999999999999987788889999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|++++++.++|.|.+++ +|+||++||.++..+.++.+.|++||+|+.+|+++|+.|++++||+|++|+||+++|++..
T Consensus       116 ~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  195 (275)
T PRK05876        116 WGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVA  195 (275)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccccc
Confidence            999999999999998775 6899999999999999999999999999999999999999999999999999999999765


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~  412 (475)
                      +...........                       .+. ....+             ..+.....++|++||+.+++++.
T Consensus       196 ~~~~~~~~~~~~-----------------------~~~-~~~~~-------------~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        196 NSERIRGAACAQ-----------------------SST-TGSPG-------------PLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             chhhhcCccccc-----------------------ccc-ccccc-------------cccccccCCCHHHHHHHHHHHHH
Confidence            321110000000                       000 00000             00011236799999999999999


Q ss_pred             cCCeeEEeCc
Q psy3252         413 KGNYFSTVGL  422 (475)
Q Consensus       413 ~g~~~~~~~~  422 (475)
                      +++..++++.
T Consensus       239 ~~~~~~~~~~  248 (275)
T PRK05876        239 ANRLYVLPHA  248 (275)
T ss_pred             cCCeEEecCh
Confidence            9987776654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3.9e-38  Score=308.88  Aligned_cols=233  Identities=16%  Similarity=0.150  Sum_probs=192.9

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChh--HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          94 LAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEK--KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        94 ~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+..                       
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-----------------------   58 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL-----------------------   58 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc-----------------------
Confidence            56789999999986  89999999999999999999876543  3344445554322                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc----CCCcccCCHHHHHHhhhhhhhccccchhhcccc
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL----CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS  245 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (475)
                       ..+.++++|++ |.++++++++++.+++|++|+||||||+..    ..++.+.+.++|+++                  
T Consensus        59 -~~~~~~~~Dl~-d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~------------------  118 (258)
T PRK07370         59 -NPSLFLPCDVQ-DDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARA------------------  118 (258)
T ss_pred             -CcceEeecCcC-CHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHH------------------
Confidence             23567899999 999999999999999999999999999864    256778888999988                  


Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         246 WTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       246 ~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                         +++|+.|+++++++++|.|.+  .|+||++||..+..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||+
T Consensus       119 ---~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~  193 (258)
T PRK07370        119 ---LEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGP  193 (258)
T ss_pred             ---heeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCc
Confidence               999999999999999999975  389999999999989999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccc--CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         326 TDTPGFENEEK--SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       326 v~T~~~~~~~~--~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+|++......  ..........|++|+++||||+.+.  .|++++....++|
T Consensus       194 v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~--~fl~s~~~~~~tG  244 (258)
T PRK07370        194 IRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTA--AFLLSDLASGITG  244 (258)
T ss_pred             ccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHH--HHHhChhhccccC
Confidence            99997543211  1111112235789999999999875  4567777777776

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=304.99  Aligned_cols=237  Identities=27%  Similarity=0.309  Sum_probs=204.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+..                      .++.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~----------------------~~~~   61 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAG----------------------ARVL   61 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCC----------------------ceEE
Confidence            467999999999999999999999999999999999999988888887653211                      5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.+++.++++++.+.++++|+||||||+....+..+.+.++|+.+                     +++|+.
T Consensus        62 ~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  119 (260)
T PRK07063         62 AVPADVT-DAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRC---------------------FAVDLD  119 (260)
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHH---------------------HHhhhH
Confidence            8999999 999999999999999999999999999876666777888899887                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      ++++++++++|.|.+++.|+||++||..+..+.++...|++||+|+.+|+++|+.|++++||+||+|+||+|+|++....
T Consensus       120 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~  199 (260)
T PRK07063        120 GAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW  199 (260)
T ss_pred             HHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh
Confidence            99999999999999887899999999999999999999999999999999999999999999999999999999986543


Q ss_pred             ccCCc------cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKP------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ....+      .......|++|+++|||++.+.+  |++++...+++|-
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~--fl~s~~~~~itG~  246 (260)
T PRK07063        200 WNAQPDPAAARAETLALQPMKRIGRPEEVAMTAV--FLASDEAPFINAT  246 (260)
T ss_pred             hhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHH--HHcCccccccCCc
Confidence            21111      11122457899999999998754  4666666677763

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-38  Score=304.33  Aligned_cols=235  Identities=23%  Similarity=0.263  Sum_probs=200.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~   60 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG------------------------GKV   60 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------------------------CeE
Confidence            46789999999999999999999999999999999999998888887776543                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ..+.+|++ +.++++++++++.+.+|++|+||||||+....++.+.+.++++.+                     +++|+
T Consensus        61 ~~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  118 (253)
T PRK05867         61 VPVCCDVS-QHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRL---------------------QNTNV  118 (253)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHhcc
Confidence            78999999 999999999999999999999999999887777888889999888                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccC-C-CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGI-Y-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~-~-~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      .++++++++++|.|.+++ .|+||++||..+..+. + ....|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~  198 (253)
T PRK05867        119 TGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL  198 (253)
T ss_pred             hhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence            999999999999998765 4799999999886543 3 457899999999999999999999999999999999999998


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ........ .......+.+|+.+||||+++.  +|++++...+++|-
T Consensus       199 ~~~~~~~~-~~~~~~~~~~r~~~p~~va~~~--~~L~s~~~~~~tG~  242 (253)
T PRK05867        199 VEPYTEYQ-PLWEPKIPLGRLGRPEELAGLY--LYLASEASSYMTGS  242 (253)
T ss_pred             cccchHHH-HHHHhcCCCCCCcCHHHHHHHH--HHHcCcccCCcCCC
Confidence            76432211 1112234789999999999875  45667777777763

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.1e-38  Score=307.35  Aligned_cols=231  Identities=14%  Similarity=0.126  Sum_probs=190.2

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++||++|||||++  |||+++|++|+++|++|++++|+. ..++..+++.+..+                       . 
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g-----------------------~-   59 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG-----------------------C-   59 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC-----------------------C-
Confidence            35789999999997  999999999999999999999884 34444455543321                       1 


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      ..++++|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++|+++                     
T Consensus        60 ~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~---------------------  117 (260)
T PRK06603         60 NFVSELDVT-NPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNS---------------------  117 (260)
T ss_pred             ceEEEccCC-CHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHH---------------------
Confidence            235789999 9999999999999999999999999997642    46778889999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.+++.+++.++|.|.+  +|+||++||.++..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||.|+|
T Consensus       118 ~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T  195 (260)
T PRK06603        118 LHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKT  195 (260)
T ss_pred             HHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcc
Confidence            999999999999999999964  489999999999888899999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++.........  .......|++|++.||||+++.+  |++++...+++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~--~L~s~~~~~itG  243 (260)
T PRK06603        196 LASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAV--YLFSELSKGVTG  243 (260)
T ss_pred             hhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHH--HHhCcccccCcc
Confidence            97543211110  11112357899999999998864  466777777776

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.7e-38  Score=306.65  Aligned_cols=236  Identities=14%  Similarity=0.135  Sum_probs=192.3

Q ss_pred             cccCCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCC
Q psy3252          90 MKRYLAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNP  167 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
                      |.+.++++||++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+..                     
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~---------------------   59 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEEL---------------------   59 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhh---------------------
Confidence            345567889999999998  59999999999999999999999864332 223332221                     


Q ss_pred             CccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhcc
Q psy3252         168 KFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALW  243 (475)
Q Consensus       168 ~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (475)
                         ..+.++.||++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++|+++                
T Consensus        60 ---~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~----------------  119 (258)
T PRK07533         60 ---DAPIFLPLDVR-EPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALA----------------  119 (258)
T ss_pred             ---ccceEEecCcC-CHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHH----------------
Confidence               12357899999 9999999999999999999999999998642    46678888999988                


Q ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         244 RSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       244 ~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                           +++|+.|++++++.++|.|.+  .|+||++||..+..+.+++..|++||+|+.+|+++|+.|++++||+||+|+|
T Consensus       120 -----~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~P  192 (258)
T PRK07533        120 -----MDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISP  192 (258)
T ss_pred             -----HhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence                 999999999999999999964  4899999999998888899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         324 PDTDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       324 G~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |.|+|++.........  .......|++|+..|||++.+.+.  ++++....++|
T Consensus       193 G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~--L~s~~~~~itG  245 (258)
T PRK07533        193 GPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAF--LASDAARRLTG  245 (258)
T ss_pred             CCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHH--HhChhhccccC
Confidence            9999998654321111  111123578899999999987644  55665566665

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.9e-38  Score=307.18  Aligned_cols=232  Identities=14%  Similarity=0.068  Sum_probs=188.5

Q ss_pred             CCCCEEEEecC--CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGG--SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGa--s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++||++|||||  ++|||+++|++|+++|++|++++|+. +.++..+++....                        ...
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~------------------------~~~   58 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL------------------------DSE   58 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc------------------------CCc
Confidence            67999999997  67999999999999999999998864 3344444444322                        123


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCC----C-cccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG----T-LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      ..++||++ |.++++++++++.+++|+||+||||||+....    + +.+.+.++|+.+                     
T Consensus        59 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~---------------------  116 (261)
T PRK08690         59 LVFRCDVA-SDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTA---------------------  116 (261)
T ss_pred             eEEECCCC-CHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHH---------------------
Confidence            46899999 99999999999999999999999999987432    2 345677778777                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.++++++++++|.|+++ +|+||++||.++..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||+|+|
T Consensus       117 ~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T  195 (261)
T PRK08690        117 HEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKT  195 (261)
T ss_pred             HHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccc
Confidence            9999999999999999999754 489999999999989999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         329 PGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ++..........  ......|++|+++|||||++.  +|++.+...+++|-
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v--~~l~s~~~~~~tG~  244 (261)
T PRK08690        196 LAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTA--AFLLSDLSSGITGE  244 (261)
T ss_pred             hhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHH--HHHhCcccCCccee
Confidence            976543211111  111234789999999999875  45666666676663

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=302.39  Aligned_cols=237  Identities=24%  Similarity=0.295  Sum_probs=201.9

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ++++++||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++...+                        
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~------------------------   57 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAG------------------------   57 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC------------------------
Confidence            567889999999999999999999999999999999999754 4566666665432                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |+++++++++++.+.++++|+||||||+....++.+.+.++++.+                     ++
T Consensus        58 ~~~~~~~~D~~-~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~  115 (254)
T PRK06114         58 RRAIQIAADVT-SKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTV---------------------MD  115 (254)
T ss_pred             CceEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHH---------------------Hh
Confidence            45778999999 999999999999999999999999999987777888889999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCC--ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYG--LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~--~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +|+.++++++++++|.|.+++.|+||++||.++..+.++  .+.|++||+|+++|+++++.|+.++||+||+|+||+|+|
T Consensus       116 ~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t  195 (254)
T PRK06114        116 INLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTAT  195 (254)
T ss_pred             hcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccC
Confidence            999999999999999999888899999999998876654  689999999999999999999999999999999999999


Q ss_pred             CCCcccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++........ ........|++|+++||||+++.+  |++++..++++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~--~l~s~~~~~~tG  242 (254)
T PRK06114        196 PMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAV--FLLSDAASFCTG  242 (254)
T ss_pred             cccccccchHHHHHHHhcCCCCCCcCHHHHHHHHH--HHcCccccCcCC
Confidence            9865321111 111223458899999999999654  456777777776

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-37  Score=302.85  Aligned_cols=238  Identities=23%  Similarity=0.261  Sum_probs=205.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.++.                      .++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------------------~~~   61 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG----------------------ARL   61 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCC----------------------ceE
Confidence            4678999999999999999999999999999999999999988888877665431                      468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++++.+.++++|+||||||+....++.+.+.++|+..                     +++|+
T Consensus        62 ~~~~~D~~-~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  119 (265)
T PRK07062         62 LAARCDVL-DEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDE---------------------LELKY  119 (265)
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHh
Confidence            88999999 999999999999999999999999999977778888889999987                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++++++.++|.|++++.|+||++||..+..+.++...|+++|+|+.+|+++|+.|++++||+||+|+||+|+|+++..
T Consensus       120 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  199 (265)
T PRK07062        120 FSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRR  199 (265)
T ss_pred             HHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhh
Confidence            99999999999999988789999999999999999999999999999999999999999999999999999999998653


Q ss_pred             ccc----CC---ccc-----cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEK----SK---PRE-----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~----~~---~~~-----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ...    ..   ...     .....|++|+..||||+++.+.  ++++...+++|.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~--L~s~~~~~~tG~  253 (265)
T PRK07062        200 RYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFF--LASPLSSYTTGS  253 (265)
T ss_pred             HHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH--HhCchhcccccc
Confidence            211    00   000     0123478999999999987654  566666666663

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.1e-37  Score=302.44  Aligned_cols=232  Identities=24%  Similarity=0.326  Sum_probs=198.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++||++|||||++|||+++|+.|+++|++|++++|+ ++++++.+++.+.+                        .++.
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~------------------------~~~~   57 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNG------------------------GKAK   57 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcC------------------------CeEE
Confidence            4679999999999999999999999999999999999 77887777776432                        4678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ +.+++.++++++.+.+|++|+||||||+.. ..++.+.+.++++++                     +++|+
T Consensus        58 ~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~  115 (272)
T PRK08589         58 AYHVDIS-DEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKI---------------------MAVDM  115 (272)
T ss_pred             EEEeecC-CHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHH---------------------HHHHh
Confidence            8999999 999999999999999999999999999864 356777888889888                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|++.+++.++|.|.+++ |+||++||.++..+.++..+|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       116 ~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  194 (272)
T PRK08589        116 RGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDK  194 (272)
T ss_pred             HHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhh
Confidence            999999999999998765 8999999999999989999999999999999999999999999999999999999998765


Q ss_pred             cccCCcc--------ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPR--------ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~--------~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....+.        ......+++|+.+|||++++.+.  ++.+....++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~s~~~~~~~G  243 (272)
T PRK08589        195 LTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVF--LASDDSSFITG  243 (272)
T ss_pred             hcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHH--HcCchhcCcCC
Confidence            3221110        01123578899999999997544  55555555555

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-37  Score=299.34  Aligned_cols=235  Identities=26%  Similarity=0.329  Sum_probs=201.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~   57 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG------------------------GEA   57 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcE
Confidence            46789999999999999999999999999999999999999888887776543                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.+|++ +.++++++++++.++++++|+||||||+.. ..++.+.+.++++.+                     +++|
T Consensus        58 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~N  115 (254)
T PRK07478         58 VALAGDVR-DEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRET---------------------LATN  115 (254)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHH---------------------HHHH
Confidence            78999999 999999999999999999999999999864 357778888999888                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.+++++++.++|.|++++.|+||++||.++. .+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       116 ~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  195 (254)
T PRK07478        116 LTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMG  195 (254)
T ss_pred             hHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccc
Confidence            99999999999999998888999999999886 57788999999999999999999999999999999999999999987


Q ss_pred             cccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .........  ......+.+++.+|||++++.+.  ++.+...+++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~s~~~~~~~G  240 (254)
T PRK07478        196 RAMGDTPEALAFVAGLHALKRMAQPEEIAQAALF--LASDAASFVTG  240 (254)
T ss_pred             ccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCchhcCCCC
Confidence            644221111  11223467889999999998654  55665566665

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-37  Score=303.87  Aligned_cols=232  Identities=14%  Similarity=0.147  Sum_probs=190.5

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCh---hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCC
Q psy3252          94 LAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDE---KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPK  168 (475)
Q Consensus        94 ~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++.  +                      
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~----------------------   58 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--G----------------------   58 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--C----------------------
Confidence            56789999999997  8999999999999999999998763   33333333221  1                      


Q ss_pred             ccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc----CCCcccCCHHHHHHhhhhhhhccccchhhccc
Q psy3252         169 FIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL----CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWR  244 (475)
Q Consensus       169 ~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (475)
                        .++.++++|++ |.++++++++++.+++|++|+||||||+..    ..++.+.+.++|+..                 
T Consensus        59 --~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~-----------------  118 (257)
T PRK08594         59 --QESLLLPCDVT-SDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLA-----------------  118 (257)
T ss_pred             --CceEEEecCCC-CHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHH-----------------
Confidence              45778999999 999999999999999999999999999864    245677888888877                 


Q ss_pred             cchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         245 SWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       245 ~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                          +++|+.++++++++++|.|.+  .|+||++||.++..+.+++.+|++||+|+.+|+++|+.|++++||+||+|+||
T Consensus       119 ----~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG  192 (257)
T PRK08594        119 ----QNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAG  192 (257)
T ss_pred             ----HhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecC
Confidence                999999999999999999964  48999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         325 DTDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       325 ~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .|+|++.........  .......|++|+.+|||++++.+  +++++...+++|-
T Consensus       193 ~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~--~l~s~~~~~~tG~  245 (257)
T PRK08594        193 PIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAA--FLFSDLSRGVTGE  245 (257)
T ss_pred             cccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHH--HHcCcccccccce
Confidence            999996543211111  11122347889999999998754  4666666776663

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=303.87  Aligned_cols=247  Identities=24%  Similarity=0.320  Sum_probs=204.9

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .+.+++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.. .                        .
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~------------------------~   57 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-D------------------------D   57 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-C------------------------C
Confidence            34567899999999999999999999999999999999999988887766532 1                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++..+.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++++                     +++
T Consensus        58 ~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~---------------------~~v  115 (296)
T PRK05872         58 RVLTVVADVT-DLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRV---------------------IDV  115 (296)
T ss_pred             cEEEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHH---------------------HHH
Confidence            5677889999 999999999999999999999999999987788889999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|++++++.++|.|.++ .|+||++||.++..+.++...|++||+++++|+++|+.|++++||+||+|+||+++|++.
T Consensus       116 n~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  194 (296)
T PRK05872        116 NLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLV  194 (296)
T ss_pred             HhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhh
Confidence            9999999999999999875 489999999999999999999999999999999999999999999999999999999976


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHH
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDA  411 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai  411 (475)
                      .......+..             +....                       ..+      ......++||++|+.++.++
T Consensus       195 ~~~~~~~~~~-------------~~~~~-----------------------~~~------~p~~~~~~~~~va~~i~~~~  232 (296)
T PRK05872        195 RDADADLPAF-------------RELRA-----------------------RLP------WPLRRTTSVEKCAAAFVDGI  232 (296)
T ss_pred             hhccccchhH-------------HHHHh-----------------------hCC------CcccCCCCHHHHHHHHHHHH
Confidence            5432110000             00000                       000      01123679999999999999


Q ss_pred             hcCCeeEEeCchhHHHH
Q psy3252         412 LKGNYFSTVGLESYLIT  428 (475)
Q Consensus       412 ~~g~~~~~~~~~~~~~~  428 (475)
                      .++...++.++...++.
T Consensus       233 ~~~~~~i~~~~~~~~~~  249 (296)
T PRK05872        233 ERRARRVYAPRWVRLMQ  249 (296)
T ss_pred             hcCCCEEEchHHHHHHH
Confidence            98887777654444433

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.8e-36  Score=293.56  Aligned_cols=235  Identities=15%  Similarity=0.158  Sum_probs=195.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++++||||++|||+++|++|+ +|++|++++|+.++++++.+++.+.+.                       ..+.++.|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~-----------------------~~~~~~~~   56 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGA-----------------------TSVHVLSF   56 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccC-----------------------CceEEEEc
Confidence            479999999999999999999 599999999999999998888876432                       34778999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.++++++++++.+.+|++|++|||||+.......+.+.+++..+                     +++|+.++++
T Consensus        57 Dv~-d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~  114 (246)
T PRK05599         57 DAQ-DLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEI---------------------ATVDYTAQVS  114 (246)
T ss_pred             ccC-CHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHH---------------------HHHHHHhHHH
Confidence            999 999999999999999999999999999875544445555556555                     8999999999


Q ss_pred             HHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         259 MTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       259 l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      +++.++|.|.+++ +|+||++||.++..+.++...|++||+|+.+|+++|+.|++++||+||+|+||+|+|++.....  
T Consensus       115 ~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~--  192 (246)
T PRK05599        115 MLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK--  192 (246)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC--
Confidence            9999999998764 6999999999999999999999999999999999999999999999999999999999643210  


Q ss_pred             CccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCC--
Q psy3252         338 KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGN--  415 (475)
Q Consensus       338 ~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~--  415 (475)
                                                                     +        .+...+||++|+.++..+.+++  
T Consensus       193 -----------------------------------------------~--------~~~~~~pe~~a~~~~~~~~~~~~~  217 (246)
T PRK05599        193 -----------------------------------------------P--------APMSVYPRDVAAAVVSAITSSKRS  217 (246)
T ss_pred             -----------------------------------------------C--------CCCCCCHHHHHHHHHHHHhcCCCC
Confidence                                                           0        0013589999999999999875  


Q ss_pred             eeEEeCchhHHHHHHhcCCcch
Q psy3252         416 YFSTVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~P~  437 (475)
                      ..+.++....+ ..+..+++|.
T Consensus       218 ~~~~~~~~~~~-~~~~~~~~p~  238 (246)
T PRK05599        218 TTLWIPGRLRV-LAWIMRLVPR  238 (246)
T ss_pred             ceEEeCccHHH-HHHHHHhCcH
Confidence            34555544444 4445578883

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-37  Score=302.88  Aligned_cols=231  Identities=16%  Similarity=0.135  Sum_probs=187.9

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++||++|||||++  |||+++|++|+++|++|++++|+ +++++..+++....                        ..+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~------------------------~~~   58 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL------------------------GSD   58 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc------------------------CCc
Confidence            5789999999986  99999999999999999999998 34555555554432                        234


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC-----cccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-----LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      .++.||++ |.++++++++++.+++|++|+||||||+.....     +.+.+.++|+.+                     
T Consensus        59 ~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~---------------------  116 (262)
T PRK07984         59 IVLPCDVA-EDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIA---------------------  116 (262)
T ss_pred             eEeecCCC-CHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHH---------------------
Confidence            57899999 999999999999999999999999999864322     456677888877                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|++.+++.++|.|.+  +|+||++||.++..+.+++.+|++||+|+.+|+++|+.|++++||+||+|+||+|+|
T Consensus       117 ~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T  194 (262)
T PRK07984        117 HDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT  194 (262)
T ss_pred             hhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccc
Confidence            999999999999999986643  489999999999888899999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         329 PGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ++.........  .......|++|++.||||+++.  +|++++...+++|-
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~--~~L~s~~~~~itG~  243 (262)
T PRK07984        195 LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSA--AFLCSDLSAGISGE  243 (262)
T ss_pred             hHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHH--HHHcCcccccccCc
Confidence            86432211101  1111234789999999999885  44666666676663

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=296.96  Aligned_cols=237  Identities=17%  Similarity=0.219  Sum_probs=206.8

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.+++.+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .
T Consensus         3 ~~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~------------------------~   58 (254)
T PRK08085          3 DLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG------------------------I   58 (254)
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC------------------------C
Confidence            4567889999999999999999999999999999999999988888877776532                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++..+.+|++ |.++++++++++.+.++++|+||||||.....++.+.+.++|+..                     +++
T Consensus        59 ~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~  116 (254)
T PRK08085         59 KAHAAPFNVT-HKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDV---------------------IAV  116 (254)
T ss_pred             eEEEEecCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------HHH
Confidence            5778899999 999999999999999999999999999877677888899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.+++.+++++++.|.+++.|+||++||..+..+.++...|++||+|+++++++++.|++++||+||+|+||+++|++.
T Consensus       117 n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~  196 (254)
T PRK08085        117 NQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT  196 (254)
T ss_pred             HhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence            99999999999999998877899999999999888899999999999999999999999999999999999999999987


Q ss_pred             cccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........  .......|++++++||||+++  .++++.+...+++|
T Consensus       197 ~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~--~~~l~~~~~~~i~G  241 (254)
T PRK08085        197 KALVEDEAFTAWLCKRTPAARWGDPQELIGA--AVFLSSKASDFVNG  241 (254)
T ss_pred             hhhccCHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCccccCCcC
Confidence            65322111  111224578999999999975  56677777777776

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3.5e-37  Score=308.41  Aligned_cols=246  Identities=13%  Similarity=0.116  Sum_probs=192.6

Q ss_pred             CCCCCCEEEEecC--CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          94 LAPTNGTLSVTGG--SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        94 ~~l~gk~vLITGa--s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ++++||++|||||  |+|||+++|+.|+++|++|++ +|+.++++++..++.+.....          .. .........
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~----------~~-~~~~~~~~~   72 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDE----------SR-KLPDGSLME   72 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccch----------hh-hcccccccC
Confidence            5688999999999  899999999999999999999 899999998887775421000          00 000000001


Q ss_pred             eEEEEEeec--CC-----------------CHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhh
Q psy3252         172 FIEYVSLDI--SK-----------------DYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQP  230 (475)
Q Consensus       172 ~v~~~~~Dv--t~-----------------d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~  230 (475)
                      ....+.+|+  ++                 +.++++++++++.+++|+||+||||||+..  ..++.+.+.++|+++   
T Consensus        73 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~---  149 (303)
T PLN02730         73 ITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAA---  149 (303)
T ss_pred             cCeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHH---
Confidence            235678888  30                 244899999999999999999999998643  367889999999988   


Q ss_pred             hhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC-hhhHHHHHHHHHHHHHHHH
Q psy3252         231 LWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL-AAYTSSKFALKGFAEALYM  309 (475)
Q Consensus       231 ~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~-~~Y~aSKaAl~~l~~sLa~  309 (475)
                                        |++|+.++++++++++|.|.++  |+|||+||.++..+.+++ ..|++||+|+++|+++|+.
T Consensus       150 ------------------~~vN~~~~~~l~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~  209 (303)
T PLN02730        150 ------------------ISASSYSFVSLLQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAF  209 (303)
T ss_pred             ------------------HHHHhHHHHHHHHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHH
Confidence                              9999999999999999999764  999999999998888866 5899999999999999999


Q ss_pred             HHcc-CCcEEEEEeCCCCCCCCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         310 EVKQ-SGLTITLCLPPDTDTPGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       310 El~~-~gIrVn~V~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+++ +|||||+|+||+|+|++..........  ......|++|+..|+|++.+.  +|++++...+++|
T Consensus       210 El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~--~fLaS~~a~~itG  277 (303)
T PLN02730        210 EAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAA--AFLASPLASAITG  277 (303)
T ss_pred             HhCcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCccccCccC
Confidence            9986 899999999999999987642111000  001123678999999999875  4466776677666

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8e-37  Score=299.98  Aligned_cols=230  Identities=13%  Similarity=0.082  Sum_probs=183.5

Q ss_pred             CCCCEEEEecC--CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGG--SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGa--s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++|++|||||  ++|||+++|++|+++|++|++++|... .++..+++.+..+                        ..
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~------------------------~~   58 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG------------------------SD   58 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcC------------------------Cc
Confidence            67899999996  689999999999999999999876522 1222223322211                        12


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCC----C-cccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG----T-LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      .++.+|++ |+++++++++++.+++|++|+||||||+....    + +.+.+.++|+..                     
T Consensus        59 ~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~---------------------  116 (260)
T PRK06997         59 LVFPCDVA-SDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIA---------------------  116 (260)
T ss_pred             ceeeccCC-CHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHH---------------------
Confidence            36889999 99999999999999999999999999986432    2 345778888877                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.++++++++++|+|.  +.|+||++||.++..+.+++.+|++||+|+.+|+++|+.|++++||+||+|+||+|+|
T Consensus       117 ~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T  194 (260)
T PRK06997        117 HDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKT  194 (260)
T ss_pred             HHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCcccc
Confidence            99999999999999999994  3489999999999888899999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++..........  ......|++|.+.||||+++.  .|++++...+++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~--~~l~s~~~~~itG  242 (260)
T PRK06997        195 LAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVA--AFLLSDLASGVTG  242 (260)
T ss_pred             chhccccchhhHHHHHHhcCcccccCCHHHHHHHH--HHHhCccccCcce
Confidence            875432111111  111234789999999999875  4466666666665

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.9e-37  Score=303.01  Aligned_cols=231  Identities=13%  Similarity=0.116  Sum_probs=188.6

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++||++|||||+  +|||+++|+.|+++|++|++++|+.. ..+..+++.+..                        ...
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~------------------------~~~   62 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL------------------------GAF   62 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc------------------------CCc
Confidence            468999999997  89999999999999999999988742 223333333221                        123


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ..+++|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++|+.+                     +
T Consensus        63 ~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~---------------------~  120 (272)
T PRK08159         63 VAGHCDVT-DEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMT---------------------M  120 (272)
T ss_pred             eEEecCCC-CHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHH---------------------H
Confidence            46899999 9999999999999999999999999998642    46678889999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.++++++++++|.|.+  .|+||++||.++..+.|++..|++||+|+.+|+++|+.|++++||+||+|+||+|+|+
T Consensus       121 ~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  198 (272)
T PRK08159        121 DISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL  198 (272)
T ss_pred             hHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence            99999999999999999964  4899999999988888999999999999999999999999999999999999999998


Q ss_pred             CCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         330 GFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       330 ~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +.........  .......|++|+..|||||++.+.  ++++...+++|.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~--L~s~~~~~itG~  246 (272)
T PRK08159        199 AASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALY--LLSDLSRGVTGE  246 (272)
T ss_pred             HHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHH--HhCccccCccce
Confidence            7543211111  111123578999999999998544  566666777763

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-37  Score=300.52  Aligned_cols=236  Identities=16%  Similarity=0.196  Sum_probs=196.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++....+                       .+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~   60 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG-----------------------IK   60 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcC-----------------------Cc
Confidence            4678999999999999999999999999999998864 66667776666654321                       46


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc------CCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL------CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                      +.++.+|++ |.++++++++++.+.++++|+||||||+..      ..++.+.+.++++.+                   
T Consensus        61 ~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~-------------------  120 (260)
T PRK08416         61 AKAYPLNIL-EPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNI-------------------  120 (260)
T ss_pred             eEEEEcCCC-CHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHH-------------------
Confidence            889999999 999999999999999999999999999753      245566777888777                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                        +++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++||+|+++|+++|+.|++++||+||+|+||++
T Consensus       121 --~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i  198 (260)
T PRK08416        121 --YTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPI  198 (260)
T ss_pred             --HhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcc
Confidence              999999999999999999998778999999999998888999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         327 DTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       327 ~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|++.........  .......|.+|+..|||++++.+.  ++.+...+++|
T Consensus       199 ~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~--l~~~~~~~~~G  248 (260)
T PRK08416        199 DTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLF--LCSEKASWLTG  248 (260)
T ss_pred             cChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HcChhhhcccC
Confidence            9998654322111  111223578899999999997655  45555555555

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-37  Score=307.49  Aligned_cols=236  Identities=18%  Similarity=0.136  Sum_probs=189.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh----------hHHHHHHHHHHHhCCCCcchhhhhHHHhhh
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE----------KKLLQAQEEIKKACPNPKFIRFIEYEEIKK  162 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~----------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (475)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.          ++++++.+++...+                
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~----------------   66 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAG----------------   66 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcC----------------
Confidence            3567899999999999999999999999999999999984          45556666664432                


Q ss_pred             cCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcc-cccc----CCCcccCCHHHHHHhhhhhhhcccc
Q psy3252         163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA-GMAL----CGTLEEMTMQDIKVMEQPLWLRGYH  237 (475)
Q Consensus       163 ~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA-G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  237 (475)
                              .++.++.+|++ +.++++++++++.+++|+||+||||| |+..    ..++.+.+.++++++          
T Consensus        67 --------~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~----------  127 (305)
T PRK08303         67 --------GRGIAVQVDHL-VPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRM----------  127 (305)
T ss_pred             --------CceEEEEcCCC-CHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHH----------
Confidence                    45678999999 99999999999999999999999999 8531    246667788888877          


Q ss_pred             chhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc---cCCCChhhHHHHHHHHHHHHHHHHHHccC
Q psy3252         238 TRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANL---GIYGLAAYTSSKFALKGFAEALYMEVKQS  314 (475)
Q Consensus       238 ~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~---~~~~~~~Y~aSKaAl~~l~~sLa~El~~~  314 (475)
                                 +++|+.++++++++++|.|.+++.|+||++||..+..   +.++...|++||+|+.+|+++|+.|++++
T Consensus       128 -----------~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~  196 (305)
T PRK08303        128 -----------LRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPH  196 (305)
T ss_pred             -----------HHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhc
Confidence                       9999999999999999999887779999999976643   23456789999999999999999999999


Q ss_pred             CcEEEEEeCCCCCCCCCccccc-CCcc--ccccccc-cCCCCChHHhhhccceeeecCCCC-CCCCC
Q psy3252         315 GLTITLCLPPDTDTPGFENEEK-SKPR--ETSLISQ-TGGLYRPEVVKQSGLTITLCLPPD-TDTPG  376 (475)
Q Consensus       315 gIrVn~V~PG~v~T~~~~~~~~-~~~~--~~~~~~~-~~~~~~pe~va~~~~~~~~~~~~~-~~~~g  376 (475)
                      ||+||+|+||+|+|++..+... ....  ......+ .++..+|||++++.  +|++++.. .+++|
T Consensus       197 gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~v--~fL~s~~~~~~itG  261 (305)
T PRK08303        197 GATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGRAV--AALAADPDVARWNG  261 (305)
T ss_pred             CcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHHHHHHH--HHHHcCcchhhcCC
Confidence            9999999999999998543211 1100  1111234 46778999999885  45666553 45555

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=4.8e-36  Score=303.28  Aligned_cols=191  Identities=28%  Similarity=0.387  Sum_probs=164.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ..|++++|||||+|||+++|++|+++|++|++++|+.++++++.+++.+.++.                      .++..
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~----------------------~~~~~  108 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSK----------------------TQIKT  108 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC----------------------cEEEE
Confidence            35899999999999999999999999999999999999999998888765431                      46788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcC--CccEEEEccccccC--CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCG--PVYMLVNCAGMALC--GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g--~IDvLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.+|++ +  ++.+.++++.+.++  ++|+||||||+...  ..+.+.+.++++.+                     +++
T Consensus       109 ~~~Dl~-~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~---------------------~~v  164 (320)
T PLN02780        109 VVVDFS-G--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNL---------------------IKV  164 (320)
T ss_pred             EEEECC-C--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHH---------------------HHH
Confidence            899998 4  23344444444444  46699999998743  45778888999888                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-c-CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANL-G-IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~-~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      |+.|++.+++.++|.|.+++.|+||++||.++.. + .|+.+.|++||+|+++|+++|+.|++++||+|++|+||+|+|+
T Consensus       165 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~  244 (320)
T PLN02780        165 NVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK  244 (320)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence            9999999999999999998889999999999865 3 5888999999999999999999999999999999999999999


Q ss_pred             CCc
Q psy3252         330 GFE  332 (475)
Q Consensus       330 ~~~  332 (475)
                      +..
T Consensus       245 ~~~  247 (320)
T PLN02780        245 MAS  247 (320)
T ss_pred             ccc
Confidence            643

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=302.49  Aligned_cols=247  Identities=29%  Similarity=0.402  Sum_probs=212.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g------------------------~~~   59 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG------------------------GEA   59 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC------------------------CcE
Confidence            34678999999999999999999999999999999999999988888886543                        467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++|++|++|||||.....++.+.+.++++++                     +++|+
T Consensus        60 ~~v~~Dv~-d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~---------------------~~vN~  117 (334)
T PRK07109         60 LAVVADVA-DAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRV---------------------TEVTY  117 (334)
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHH---------------------HHHHh
Confidence            88999999 999999999999999999999999999887778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc--CCcEEEEEeCCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ--SGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~--~gIrVn~V~PG~v~T~~~  331 (475)
                      .|++++++.++|.|.+++.|+||++||..+..+.+..+.|++||+++.+|+++|+.|+..  .+|+|++|+||.|+||++
T Consensus       118 ~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~  197 (334)
T PRK07109        118 LGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF  197 (334)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh
Confidence            999999999999999887899999999999999999999999999999999999999975  479999999999999965


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHH
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDA  411 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai  411 (475)
                      .......                                       ...  ..        ......+||+||+.++.++
T Consensus       198 ~~~~~~~---------------------------------------~~~--~~--------~~~~~~~pe~vA~~i~~~~  228 (334)
T PRK07109        198 DWARSRL---------------------------------------PVE--PQ--------PVPPIYQPEVVADAILYAA  228 (334)
T ss_pred             hhhhhhc---------------------------------------ccc--cc--------CCCCCCCHHHHHHHHHHHH
Confidence            4211000                                       000  00        0123679999999999999


Q ss_pred             hcCCeeEEeCchhHHHHHHhcCCcc
Q psy3252         412 LKGNYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       412 ~~g~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      .+++..+++|.....+.. ...++|
T Consensus       229 ~~~~~~~~vg~~~~~~~~-~~~~~P  252 (334)
T PRK07109        229 EHPRRELWVGGPAKAAIL-GNRLAP  252 (334)
T ss_pred             hCCCcEEEeCcHHHHHHH-HHHhCc
Confidence            998888888877776554 557888

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=292.48  Aligned_cols=246  Identities=26%  Similarity=0.342  Sum_probs=208.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++++++||||||+|||+++|++|+++|++|++++|+.++++++.+++.                            ++.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----------------------------~~~   53 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----------------------------LVV   53 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------------------------cce
Confidence            4678999999999999999999999999999999999988776655432                            356


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+++.++++.+.+.++++|+||||||+....++.+.+.++++++                     +++|+.
T Consensus        54 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  111 (273)
T PRK07825         54 GGPLDVT-DPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRI---------------------LDVNVY  111 (273)
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHH---------------------HHHHHH
Confidence            7899999 999999999999999999999999999987778888888888887                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |++.+++.++|.|.+++.|+||++||.++..+.++...|++||+++.+|+++|+.|+.++||+|++|+||++.|+++...
T Consensus       112 g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        112 GVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence            99999999999999988899999999999999999999999999999999999999999999999999999999964321


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g  414 (475)
                      ...                                                       .....++|+++|+.++..+.++
T Consensus       192 ~~~-------------------------------------------------------~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        192 GGA-------------------------------------------------------KGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             ccc-------------------------------------------------------cCCCCCCHHHHHHHHHHHHhCC
Confidence            000                                                       0012579999999999999998


Q ss_pred             CeeEEeCchhHHHHHHhcCCcchhhHHHHHHHH
Q psy3252         415 NYFSTVGLESYLITTLCAGFSPIVSIQETFIQA  447 (475)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~  447 (475)
                      +..+.++...+.. ..+..++| ..+.+.+.+.
T Consensus       217 ~~~~~~~~~~~~~-~~~~~~~p-~~~~~~~~~~  247 (273)
T PRK07825        217 RPEVRVPRALGPL-AQAQRLLP-RRVREALNRL  247 (273)
T ss_pred             CCEEeccHHHHHH-HHHHHhCc-HHHHHHHHHH
Confidence            8877766544433 33447778 3444444433

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-36  Score=300.14  Aligned_cols=229  Identities=21%  Similarity=0.238  Sum_probs=193.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh---------hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE---------KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACP  165 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~---------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  165 (475)
                      .++||++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++.+.+                   
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------------------   63 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG-------------------   63 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcC-------------------
Confidence            36799999999999999999999999999999999876         66777777776433                   


Q ss_pred             CCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhcccc
Q psy3252         166 NPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS  245 (475)
Q Consensus       166 ~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (475)
                           .++.++.+|++ |.+++.++++++.+.+|+||+||||||+....++.+.+.++|+.+                  
T Consensus        64 -----~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~------------------  119 (286)
T PRK07791         64 -----GEAVANGDDIA-DWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAV------------------  119 (286)
T ss_pred             -----CceEEEeCCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHH------------------
Confidence                 45778999999 999999999999999999999999999987777888999999988                  


Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHhCC------CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         246 WTVIDLNLYGTIHMTKALVEGMKQRG------RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       246 ~~v~~vN~~g~~~l~~~~lp~m~~~~------~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                         +++|+.|+++++++++|.|.++.      .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||
T Consensus       120 ---~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn  196 (286)
T PRK07791        120 ---IAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVN  196 (286)
T ss_pred             ---HHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEE
Confidence               99999999999999999997642      379999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCcccccCCccccccccccC--CCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         320 LCLPPDTDTPGFENEEKSKPRETSLISQTG--GLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       320 ~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|+|| +.|++.......    .....+.+  +...|||++++.+.  ++++....++|
T Consensus       197 ~v~Pg-~~T~~~~~~~~~----~~~~~~~~~~~~~~pedva~~~~~--L~s~~~~~itG  248 (286)
T PRK07791        197 AIAPA-ARTRMTETVFAE----MMAKPEEGEFDAMAPENVSPLVVW--LGSAESRDVTG  248 (286)
T ss_pred             EECCC-CCCCcchhhHHH----HHhcCcccccCCCCHHHHHHHHHH--HhCchhcCCCC
Confidence            99999 899976432110    00011222  46799999988644  56666666666

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=294.21  Aligned_cols=241  Identities=25%  Similarity=0.280  Sum_probs=201.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ...+++|+++||||++|||+++|+.|+++|++|++++|+.+.++++.+++.+.+                        .+
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~------------------------~~   90 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG------------------------GD   90 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------Cc
Confidence            456789999999999999999999999999999999999998888887776533                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccC--CHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM--TMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      +.++.+|++ |.+++.++++.+.+.+|++|++|||||+....++.+.  +.++++..                     ++
T Consensus        91 ~~~~~~Dl~-d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~---------------------~~  148 (293)
T PRK05866         91 AMAVPCDLS-DLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERT---------------------MV  148 (293)
T ss_pred             EEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHH---------------------HH
Confidence            778999999 9999999999999999999999999998766555443  34566666                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|++.++++++|.|.+++.|+||++||.++.. +.++...|++||+|+++|+++|+.|+.++||+|++|+||.|+|+
T Consensus       149 vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~  228 (293)
T PRK05866        149 LNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP  228 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence            99999999999999999988889999999977654 36778899999999999999999999999999999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHH
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLE  409 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~  409 (475)
                      ++......                                            .           ....++||+||+.+++
T Consensus       229 ~~~~~~~~--------------------------------------------~-----------~~~~~~pe~vA~~~~~  253 (293)
T PRK05866        229 MIAPTKAY--------------------------------------------D-----------GLPALTADEAAEWMVT  253 (293)
T ss_pred             cccccccc--------------------------------------------c-----------CCCCCCHHHHHHHHHH
Confidence            75421000                                            0           0114789999999999


Q ss_pred             HHhcCCeeEEeCchhHHHHHHhcCCcc
Q psy3252         410 DALKGNYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       410 ai~~g~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      ++++++..+++ . ...+..++.+++|
T Consensus       254 ~~~~~~~~~~~-~-~~~~~~~~~~~~p  278 (293)
T PRK05866        254 AARTRPVRIAP-R-VAVAARALDSVAP  278 (293)
T ss_pred             HHhcCCeEEcc-c-HHHHHHHHHHhCc
Confidence            99998876654 3 3334444557778

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=294.22  Aligned_cols=261  Identities=22%  Similarity=0.267  Sum_probs=201.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+|+++||||++|||+++|++|+++|++|++++|+.+.++++.+                              ..+.++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~------------------------------~~~~~~   52 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA------------------------------EGLEAF   52 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH------------------------------CCceEE
Confidence            36899999999999999999999999999999999877654432                              235678


Q ss_pred             EeecCCCHHHHHHHHHHHHHhc-CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      .+|++ |.++++.+++++.+.+ +++|+||||||+...+.+.+.+.++++.+                     +++|+.|
T Consensus        53 ~~Dl~-d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~g  110 (277)
T PRK05993         53 QLDYA-EPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQ---------------------FEANFFG  110 (277)
T ss_pred             EccCC-CHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHH---------------------HhHHhHH
Confidence            99999 9999999999997776 68999999999988888888899999888                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      ++.+++.++|.|.+++.|+||++||..+..+.++.+.|++||+|+++|+++|+.|+.++||+|++|+||+|+|++..+..
T Consensus       111 ~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~  190 (277)
T PRK05993        111 WHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANAL  190 (277)
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHH
Confidence            99999999999998888999999999999999999999999999999999999999999999999999999999765432


Q ss_pred             cCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCC
Q psy3252         336 KSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGN  415 (475)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~  415 (475)
                      .....          ...++.....              ..+......   ...........++||+||+.+++++.+++
T Consensus       191 ~~~~~----------~~~~~~~~~~--------------~~~~~~~~~---~~~~~~~~~~~~~~~~va~~i~~a~~~~~  243 (277)
T PRK05993        191 AAFKR----------WIDIENSVHR--------------AAYQQQMAR---LEGGGSKSRFKLGPEAVYAVLLHALTAPR  243 (277)
T ss_pred             HHHhh----------hhccccchhH--------------HHHHHHHHH---HHhhhhccccCCCHHHHHHHHHHHHcCCC
Confidence            11000          0000000000              000000000   00000011225789999999999999886


Q ss_pred             e--eEEeCchhHHHHHHhcCCcch
Q psy3252         416 Y--FSTVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       416 ~--~~~~~~~~~~~~~~~~~~~P~  437 (475)
                      .  .+++|...+++. ++.+++|.
T Consensus       244 ~~~~~~~~~~~~~~~-~~~~~~p~  266 (277)
T PRK05993        244 PRPHYRVTTPAKQGA-LLKRLLPA  266 (277)
T ss_pred             CCCeeeeCchhHHHH-HHHHHCCH
Confidence            4  566676555544 35577783

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-36  Score=292.95  Aligned_cols=230  Identities=25%  Similarity=0.290  Sum_probs=194.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        .++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~~   54 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---G------------------------ERA   54 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C------------------------Cee
Confidence            3567999999999999999999999999999999999988777665543   1                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.++++++++++.+.++++|+||||||....... +.+.+++++.                     +++|+
T Consensus        55 ~~~~~Dl~-~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~-~~~~~~~~~~---------------------~~~n~  111 (261)
T PRK08265         55 RFIATDIT-DDAAIERAVATVVARFGRVDILVNLACTYLDDGL-ASSRADWLAA---------------------LDVNL  111 (261)
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcC-cCCHHHHHHH---------------------HhHhh
Confidence            88999999 9999999999999999999999999998654333 5678888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++++++.++|.|. ++.|+||++||.++..+.++...|++||+++.+|+++++.|++++||+||+|+||+++|++...
T Consensus       112 ~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~  190 (261)
T PRK08265        112 VSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDE  190 (261)
T ss_pred             HHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhh
Confidence            999999999999998 5679999999999999999999999999999999999999999999999999999999998654


Q ss_pred             cccCCccc----cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPRE----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~~----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........    .....+++|+++|||++++.+.  ++++...+++|
T Consensus       191 ~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~--l~s~~~~~~tG  235 (261)
T PRK08265        191 LSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAF--LCSDAASFVTG  235 (261)
T ss_pred             hcccchhHHHHhhcccCCCCCccCHHHHHHHHHH--HcCccccCccC
Confidence            33221111    1123578999999999988654  45555566665

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=8.1e-36  Score=291.10  Aligned_cols=235  Identities=20%  Similarity=0.242  Sum_probs=197.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||+++||||++|||.++|++|+++|++|++++++..  ++..+++....                        .+
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~------------------------~~   58 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALG------------------------RR   58 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcC------------------------Ce
Confidence            34688999999999999999999999999999999887642  34444444321                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++++|++ |.++++++++++.++++++|++|||||+....++.+.+.+++++.                     +++|
T Consensus        59 ~~~~~~Dl~-~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N  116 (253)
T PRK08993         59 FLSLTADLR-KIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDV---------------------MNLN  116 (253)
T ss_pred             EEEEECCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------Hhhh
Confidence            788999999 999999999999999999999999999876677888889999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+|+++++++++.|+.++||+||+|+||+|+|++.
T Consensus       117 ~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~  196 (253)
T PRK08993        117 IKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNT  196 (253)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcch
Confidence            9999999999999998764 589999999999988888999999999999999999999999999999999999999987


Q ss_pred             cccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         332 ENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       332 ~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .........  ......|.+|+..|||++++.  ++++++...+++|.
T Consensus       197 ~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~--~~l~s~~~~~~~G~  242 (253)
T PRK08993        197 QQLRADEQRSAEILDRIPAGRWGLPSDLMGPV--VFLASSASDYINGY  242 (253)
T ss_pred             hhhccchHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCccccCccCc
Confidence            543221111  111234779999999999875  45667777777763

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-35  Score=292.69  Aligned_cols=240  Identities=25%  Similarity=0.287  Sum_probs=202.3

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |+..+++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++...+                       
T Consensus         2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------------------   58 (278)
T PRK08277          2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG-----------------------   58 (278)
T ss_pred             CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-----------------------
Confidence            344567889999999999999999999999999999999999888888877775432                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCC---------------CcccCCHHHHHHhhhhhhhc
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG---------------TLEEMTMQDIKVMEQPLWLR  234 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~---------------~~~~~~~~~~~~~~~~~~~~  234 (475)
                       .++.++.+|++ +.+++..+++++.++++++|+||||||.....               ++.+.+.++++..       
T Consensus        59 -~~~~~~~~Dl~-~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  129 (278)
T PRK08277         59 -GEALAVKADVL-DKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFV-------  129 (278)
T ss_pred             -CeEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHH-------
Confidence             46888999999 99999999999999999999999999975432               3456667777766       


Q ss_pred             cccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccC
Q psy3252         235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQS  314 (475)
Q Consensus       235 ~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~  314 (475)
                                    +++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++||+|+++|+++++.|++++
T Consensus       130 --------------~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~  195 (278)
T PRK08277        130 --------------FDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKV  195 (278)
T ss_pred             --------------HhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCcc
Confidence                          999999999999999999998888999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEeCCCCCCCCCcccccCCc-----c--ccccccccCCCCChHHhhhccceeeecCC-CCCCCCCc
Q psy3252         315 GLTITLCLPPDTDTPGFENEEKSKP-----R--ETSLISQTGGLYRPEVVKQSGLTITLCLP-PDTDTPGF  377 (475)
Q Consensus       315 gIrVn~V~PG~v~T~~~~~~~~~~~-----~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~-~~~~~~g~  377 (475)
                      ||+||+|+||+|+|++.........     .  ......|++|+++|||||++.+  |++++ ....++|-
T Consensus       196 girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~--~l~s~~~~~~~tG~  264 (278)
T PRK08277        196 GIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLL--WLADEKASSFVTGV  264 (278)
T ss_pred             CeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHH--HHcCccccCCcCCC
Confidence            9999999999999997553321110     0  1112347899999999999854  56776 66677663

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-35  Score=285.92  Aligned_cols=236  Identities=23%  Similarity=0.323  Sum_probs=198.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|+++||||++|||.+++++|+++|++|++++|+.++++++.+++...                         .++.++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------------------~~~~~~~   56 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-------------------------ARVSVYA   56 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC-------------------------CeeEEEE
Confidence            478999999999999999999999999999999988777665544211                         2578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCccc-CCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE-MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      +|++ +.+++.++++++.++++++|+||||||+.......+ .+.++++.+                     +++|+.|+
T Consensus        57 ~Dl~-~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~~g~  114 (257)
T PRK07024         57 ADVR-DADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREV---------------------MDTNYFGM  114 (257)
T ss_pred             cCCC-CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHH---------------------HhHhcHHH
Confidence            9999 999999999999999999999999999865433333 677888877                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      +++++.++|.|.+++.|+||++||.++..+.++...|++||++++.|+++++.|+.++||+|++|+||+|+|++..... 
T Consensus       115 ~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-  193 (257)
T PRK07024        115 VATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP-  193 (257)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC-
Confidence            9999999999998888999999999999999999999999999999999999999999999999999999999533110 


Q ss_pred             CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCe
Q psy3252         337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNY  416 (475)
Q Consensus       337 ~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~  416 (475)
                                                              +     .          .+..++|+++|+.++.++.+++.
T Consensus       194 ----------------------------------------~-----~----------~~~~~~~~~~a~~~~~~l~~~~~  218 (257)
T PRK07024        194 ----------------------------------------Y-----P----------MPFLMDADRFAARAARAIARGRR  218 (257)
T ss_pred             ----------------------------------------C-----C----------CCCccCHHHHHHHHHHHHhCCCc
Confidence                                                    0     0          01146899999999999999998


Q ss_pred             eEEeCchhHHHHHHhcCCcch
Q psy3252         417 FSTVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~P~  437 (475)
                      ..++++...++.. +.+++|.
T Consensus       219 ~~~~~~~~~~~~~-~~~~~p~  238 (257)
T PRK07024        219 FRVIPWQMGVVAK-LLRVLPR  238 (257)
T ss_pred             EEECCchHHHHHH-HHHHCcH
Confidence            7777665554444 3467773

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=289.16  Aligned_cols=231  Identities=20%  Similarity=0.218  Sum_probs=192.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++|+++||||++|||+++|++|+++|++|++++ ++.++++++..++...+                        .++.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~   57 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG------------------------GSAF   57 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcC------------------------CceE
Confidence            3589999999999999999999999999999875 66777777776665432                        4567


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHh----cC--CccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDR----CG--PVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~----~g--~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      .+.+|++ +.+++..+++++.+.    ++  ++|+||||||+....++.+.+.++|+.+                     
T Consensus        58 ~~~~D~~-~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------  115 (252)
T PRK12747         58 SIGANLE-SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRM---------------------  115 (252)
T ss_pred             EEecccC-CHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------
Confidence            8899999 999999999888753    34  8999999999876667788889999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|.+.  |+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       116 ~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t  193 (252)
T PRK12747        116 VSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKT  193 (252)
T ss_pred             HHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccC
Confidence            9999999999999999999754  89999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++..+......  .......+++|+..|||++++..  |++.+...+++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~--~l~s~~~~~~~G  241 (252)
T PRK12747        194 DMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAA--FLASPDSRWVTG  241 (252)
T ss_pred             chhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHH--HHcCccccCcCC
Confidence            98654322111  11112336789999999999864  456666666665

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.2e-35  Score=318.34  Aligned_cols=258  Identities=27%  Similarity=0.323  Sum_probs=214.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..+.++++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~  366 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG------------------------AVA  366 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CeE
Confidence            45678899999999999999999999999999999999999988888776543                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++++.+.+|++|+||||||+...+++.+.+.++++.+                     +++|+
T Consensus       367 ~~~~~Dv~-~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  424 (582)
T PRK05855        367 HAYRVDVS-DADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRV---------------------LDVNL  424 (582)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            88999999 999999999999999999999999999987788888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++++++|.|.+++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+|++|+||+|+|++..
T Consensus       425 ~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  504 (582)
T PRK05855        425 WGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVA  504 (582)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchh
Confidence            999999999999999876 4899999999999999999999999999999999999999999999999999999999866


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~  412 (475)
                      ........             +++...                       .+.......  ....++||+||+.++.++.
T Consensus       505 ~~~~~~~~-------------~~~~~~-----------------------~~~~~~~~~--~~~~~~p~~va~~~~~~~~  546 (582)
T PRK05855        505 TTRFAGAD-------------AEDEAR-----------------------RRGRADKLY--QRRGYGPEKVAKAIVDAVK  546 (582)
T ss_pred             ccccCCcc-------------cchhhh-----------------------HHhhhhhhc--cccCCCHHHHHHHHHHHHH
Confidence            43210000             000000                       000000000  1124689999999999999


Q ss_pred             cCCeeEEeCchhHHHHHHhcCCcc
Q psy3252         413 KGNYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       413 ~g~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      +++..+.+++..++... +.+++|
T Consensus       547 ~~~~~~~~~~~~~~~~~-~~~~~p  569 (582)
T PRK05855        547 RNKAVVPVTPEAHAGYG-VSRFAP  569 (582)
T ss_pred             cCCCEEEeCHHHHHHHH-HHHHCh
Confidence            99999999877666555 446788

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-36  Score=291.48  Aligned_cols=229  Identities=24%  Similarity=0.193  Sum_probs=194.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.                         .++.++.+|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------------------~~~~~~~~D   56 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-------------------------GEVYAVKAD   56 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-------------------------CCceEEEcC
Confidence            6899999999999999999999999999999999888888777542                         346789999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      ++ |.++++++++++.++++++|+||||||...  ..++.+.+.+++...                     +++|+.+++
T Consensus        57 v~-d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  114 (259)
T PRK08340         57 LS-DKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEA---------------------ALLHLVAPG  114 (259)
T ss_pred             CC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHH---------------------HhhcchHHH
Confidence            99 999999999999999999999999999753  235667777888766                     999999999


Q ss_pred             HHHHHHHHHHHh-CCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         258 HMTKALVEGMKQ-RGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       258 ~l~~~~lp~m~~-~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      ++++.++|.|.+ ++.|+||++||.++..+.++...|++||+|+.+|+++|+.|++++||+||+|+||+|+|++......
T Consensus       115 ~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~  194 (259)
T PRK08340        115 YLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLA  194 (259)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHH
Confidence            999999999874 4579999999999998889999999999999999999999999999999999999999998643110


Q ss_pred             --------CCcc----ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         337 --------SKPR----ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       337 --------~~~~----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                              ..+.    ......|++|+++|||||++.  +||+++..++++|-
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~--~fL~s~~~~~itG~  245 (259)
T PRK08340        195 RIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLI--AFLLSENAEYMLGS  245 (259)
T ss_pred             hhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHH--HHHcCcccccccCc
Confidence                    0010    111234789999999999875  66888888888774

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.1e-36  Score=294.15  Aligned_cols=228  Identities=19%  Similarity=0.180  Sum_probs=183.4

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          95 APTNGTLSVTGG--SSGIGKHVAIEAAKRGAHVTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        95 ~l~gk~vLITGa--s~GIG~aiA~~La~~Ga~Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++.                           
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---------------------------   56 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP---------------------------   56 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC---------------------------
Confidence            467999999999  89999999999999999999999864  33344333221                           


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                      .++.++.+|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++++++                   
T Consensus        57 ~~~~~~~~Dv~-~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~-------------------  116 (256)
T PRK07889         57 EPAPVLELDVT-NEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATA-------------------  116 (256)
T ss_pred             CCCcEEeCCCC-CHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHH-------------------
Confidence            23567899999 9999999999999999999999999998643    35667788888877                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                        +++|+.+++++++.++|.|.+  .|+||++||.. ..+.+.+..|++||+|+.+|+++|+.|++++||+||+|+||.|
T Consensus       117 --~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v  191 (256)
T PRK07889        117 --LHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPI  191 (256)
T ss_pred             --HHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcc
Confidence              999999999999999999974  48999998753 4567788899999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCccc--cccccccC-CCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         327 DTPGFENEEKSKPRE--TSLISQTG-GLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       327 ~T~~~~~~~~~~~~~--~~~~~~~~-~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|++...........  .....|++ ++++|||||++.+  +++++....++|
T Consensus       192 ~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~--~l~s~~~~~~tG  242 (256)
T PRK07889        192 RTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVV--ALLSDWFPATTG  242 (256)
T ss_pred             cChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHH--HHhCcccccccc
Confidence            999765432111111  11124666 6899999999865  456666666655

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=289.53  Aligned_cols=235  Identities=24%  Similarity=0.341  Sum_probs=200.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||.++|++|+++|++|++++|+ ++++++.+.+.+.+                        .+
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~------------------------~~   64 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG------------------------RK   64 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC------------------------Cc
Confidence            346789999999999999999999999999999999998 55666665554432                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ +.++++++++++.+.+|++|++|||||.....++.+.+.++++..                     +++|
T Consensus        65 ~~~~~~D~~-~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n  122 (258)
T PRK06935         65 VTFVQVDLT-KPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAV---------------------MDIN  122 (258)
T ss_pred             eEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHh
Confidence            788999999 999999999999999999999999999876677788888899887                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.+++.++++++|.|.+++.|+||++||..+..+.++.+.|++||+|+++|+++++.|+.++||+||+|+||.|+|++..
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~  202 (258)
T PRK06935        123 LNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTA  202 (258)
T ss_pred             CHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchh
Confidence            99999999999999998888999999999999888999999999999999999999999999999999999999999765


Q ss_pred             ccccCCccccc--cccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPRETS--LISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~~~~--~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...........  ...+.++...|||++.+.  +|++++....++|
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~--~~l~s~~~~~~~G  246 (258)
T PRK06935        203 PIRADKNRNDEILKRIPAGRWGEPDDLMGAA--VFLASRASDYVNG  246 (258)
T ss_pred             hcccChHHHHHHHhcCCCCCCCCHHHHHHHH--HHHcChhhcCCCC
Confidence            33221111111  134678999999998875  5566666666665

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-35  Score=285.31  Aligned_cols=237  Identities=19%  Similarity=0.177  Sum_probs=195.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhH-HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKK-LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.+. ++++.+++...+.                       .+++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~-----------------------~~v~   63 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGA-----------------------SSVE   63 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCC-----------------------CceE
Confidence            46799999999999999999999995 899999999886 8888887765432                       3688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+++.++++++.+ ++++|++|||+|+.....-...+.++..++                     +++|+.
T Consensus        64 ~~~~D~~-~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~vN~~  120 (253)
T PRK07904         64 VIDFDAL-DTDSHPKVIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQI---------------------AEINYT  120 (253)
T ss_pred             EEEecCC-ChHHHHHHHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHH---------------------HHHHhH
Confidence            9999999 99999999999886 589999999999864321111122233333                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +++.+++.++|.|.+++.|+||++||..+..+.++...|++||+|+.+|+++|+.|+.++||+|++|+||+|+|++....
T Consensus       121 ~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~  200 (253)
T PRK07904        121 AAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA  200 (253)
T ss_pred             hHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC
Confidence            99999999999999988899999999998888888889999999999999999999999999999999999999964321


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g  414 (475)
                      ..                                                         ....++||++|+.+++.+.++
T Consensus       201 ~~---------------------------------------------------------~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        201 KE---------------------------------------------------------APLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             CC---------------------------------------------------------CCCCCCHHHHHHHHHHHHHcC
Confidence            00                                                         011468999999999999999


Q ss_pred             CeeEEeCchhHHHHHHhcCCcch
Q psy3252         415 NYFSTVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~P~  437 (475)
                      +..++++....++..+ .+++|.
T Consensus       224 ~~~~~~~~~~~~~~~~-~~~~p~  245 (253)
T PRK07904        224 KELVWAPPAFRYVMMV-LRHIPR  245 (253)
T ss_pred             CCEEEEChhHHHHHHH-HHhCCH
Confidence            9998888766555554 477773

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-35  Score=288.61  Aligned_cols=231  Identities=21%  Similarity=0.253  Sum_probs=191.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.+++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .++
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~   54 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG---------------------------DHV   54 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------------------------Ccc
Confidence            34679999999999999999999999999999999999887776554431                           346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHH----HHHhhhhhhhccccchhhccccchh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQD----IKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      .++.+|++ +.++++++++++.+.++++|+||||||+.. ..++.+.+.++    |+++                     
T Consensus        55 ~~~~~D~~-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~---------------------  112 (263)
T PRK06200         55 LVVEGDVT-SYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEI---------------------  112 (263)
T ss_pred             eEEEccCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHH---------------------
Confidence            78899999 999999999999999999999999999864 34555666665    5555                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.+++.+++.++|.|.++ .|+||++||.++..+.++...|++||+|+++|+++|+.|+++. |+||+|+||+|+|
T Consensus       113 ~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t  190 (263)
T PRK06200        113 FNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVT  190 (263)
T ss_pred             eeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCcccc
Confidence            9999999999999999998765 4899999999999998899999999999999999999999985 9999999999999


Q ss_pred             CCCccccc--------CCc---cccccccccCCCCChHHhhhccceeeecCCC-CCCCCCc
Q psy3252         329 PGFENEEK--------SKP---RETSLISQTGGLYRPEVVKQSGLTITLCLPP-DTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~--------~~~---~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~-~~~~~g~  377 (475)
                      ++......        ..+   .......|++|+.+|||++++.  +|++++. ..+++|-
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~--~fl~s~~~~~~itG~  249 (263)
T PRK06200        191 DLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPY--VLLASRRNSRALTGV  249 (263)
T ss_pred             CCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhh--hheecccccCcccce
Confidence            98643210        001   1112235889999999999875  4566766 6677763

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-35  Score=286.13  Aligned_cols=237  Identities=24%  Similarity=0.266  Sum_probs=202.2

Q ss_pred             CCCCCEEEEecCCC-hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSS-GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~-GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++|+++||||+| |||+++|+.|+++|++|++++|+.+++++..+++.+..+.                      .++
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~   71 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL----------------------GRV   71 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCC----------------------ceE
Confidence            35689999999985 9999999999999999999999998888887777653221                      357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.++++++++++.+.+|++|+||||||......+.+.+.++++++                     +++|+
T Consensus        72 ~~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  129 (262)
T PRK07831         72 EAVVCDVT-SEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRV---------------------LDVTL  129 (262)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            88999999 999999999999999999999999999877777888888999887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.+++.++|.|.+++ .|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||.++|++..
T Consensus       130 ~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~  209 (262)
T PRK07831        130 TGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLA  209 (262)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccc
Confidence            999999999999998876 7999999999998888899999999999999999999999999999999999999999875


Q ss_pred             ccccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ....... .......+++|...|||++++.+  |++++...+++|-
T Consensus       210 ~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~--~l~s~~~~~itG~  253 (262)
T PRK07831        210 KVTSAELLDELAAREAFGRAAEPWEVANVIA--FLASDYSSYLTGE  253 (262)
T ss_pred             cccCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHcCchhcCcCCc
Confidence            4321111 11122347899999999998754  4677766777763

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-34  Score=284.98  Aligned_cols=257  Identities=25%  Similarity=0.309  Sum_probs=202.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++|+++||||++|||+++|++|+++|++|++++|+.++++++..                              ..+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------------------------------~~~~~~   51 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------------------------------LGVHPL   51 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------------------------------CCCeEE
Confidence            57899999999999999999999999999999999877654321                              235678


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.++++++++++.+.++++|+||||||+...+++.+.+.++++..                     +++|+.|+
T Consensus        52 ~~Dv~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  109 (273)
T PRK06182         52 SLDVT-DEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQ---------------------FEVNLFGA  109 (273)
T ss_pred             EeeCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHH---------------------HhHHhHHH
Confidence            99999 999999999999999999999999999987788888899999988                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      +.+++.++|.|++++.|+||++||..+..+.++...|++||+++++|+++++.|+.++||+|++|+||+|+|++......
T Consensus       110 ~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  189 (273)
T PRK06182        110 ARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAAD  189 (273)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhh
Confidence            99999999999988889999999999888888888999999999999999999999999999999999999997532211


Q ss_pred             CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcC--
Q psy3252         337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKG--  414 (475)
Q Consensus       337 ~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g--  414 (475)
                      ....      ...+. ...+.++.....+                       ....+.....+|++||+.+++++..+  
T Consensus       190 ~~~~------~~~~~-~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~vA~~i~~~~~~~~~  239 (273)
T PRK06182        190 HLLK------TSGNG-AYAEQAQAVAASM-----------------------RSTYGSGRLSDPSVIADAISKAVTARRP  239 (273)
T ss_pred             hhcc------ccccc-chHHHHHHHHHHH-----------------------HHhhccccCCCHHHHHHHHHHHHhCCCC
Confidence            0000      00000 0000000000000                       00011223679999999999999964  


Q ss_pred             CeeEEeCchhHHHHHHhcCCcc
Q psy3252         415 NYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      +..+++|...+.+.. +.+++|
T Consensus       240 ~~~~~~g~~~~~~~~-~~~~~p  260 (273)
T PRK06182        240 KTRYAVGFGAKPLIF-LRRILP  260 (273)
T ss_pred             CceeecCcchHHHHH-HHHHCc
Confidence            467778776665554 446778

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=283.82  Aligned_cols=236  Identities=24%  Similarity=0.232  Sum_probs=200.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+++++|+++||||++|||.+++++|+++|++|++++|+.++++++.+++.+.+                        .+
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~------------------------~~   58 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG------------------------GK   58 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------Ce
Confidence            357889999999999999999999999999999999999988888887776543                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ +.++++++++++.+.++++|+||||||... ..++.+.+.++++..                     +++
T Consensus        59 ~~~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~  116 (252)
T PRK07035         59 AEALACHIG-EMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKT---------------------VDV  116 (252)
T ss_pred             EEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            778999999 999999999999999999999999999753 356677788888877                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.+++.++++++|+|.+++.|+||++||..+..+.++.+.|++||+++++|+++++.|+.++||+||+|+||.|+|++.
T Consensus       117 n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~  196 (252)
T PRK07035        117 NIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFA  196 (252)
T ss_pred             hhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccc
Confidence            99999999999999999888899999999999999999999999999999999999999999999999999999999986


Q ss_pred             cccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .........  ......+.++..+|||++++.+.  ++++...+++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~~~~~~~~~g  241 (252)
T PRK07035        197 SALFKNDAILKQALAHIPLRRHAEPSEMAGAVLY--LASDASSYTTG  241 (252)
T ss_pred             ccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHH--HhCccccCccC
Confidence            643322111  11112467899999999987544  66655555554

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=2.3e-35  Score=288.96  Aligned_cols=223  Identities=24%  Similarity=0.326  Sum_probs=191.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+....                                   .++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------------------------------~~~   46 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------------------------------NDV   46 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------------------------------Cce
Confidence            357899999999999999999999999999999999985321                                   246


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.++++++|+||||||+....++.+.+.++|+.+                     +++|+
T Consensus        47 ~~~~~D~~-~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  104 (258)
T PRK06398         47 DYFKVDVS-NKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRI---------------------INVNV  104 (258)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            78999999 999999999999999999999999999987778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|++.++++++|.|.+++.|+||++||..+..+.++..+|++||+|+++|+++++.|+.+. |+||+|+||+|+|++...
T Consensus       105 ~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        105 NGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhh
Confidence            9999999999999998888999999999999999999999999999999999999999986 999999999999998654


Q ss_pred             cccC----Ccc-------ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKS----KPR-------ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~----~~~-------~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ....    .+.       ......+++|+..|||++++.+  +++++...+++|
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~--~l~s~~~~~~~G  235 (258)
T PRK06398        184 AAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVA--FLASDLASFITG  235 (258)
T ss_pred             hhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHH--HHcCcccCCCCC
Confidence            3110    011       0012347889999999999855  455665556555

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-34  Score=281.99  Aligned_cols=248  Identities=21%  Similarity=0.286  Sum_probs=206.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+++||||+||||++++++|+++|++|++++|+.++++++.+++...+                        .++.++.+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~~~~~~   56 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG------------------------GDGFYQRC   56 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CceEEEEc
Confidence            479999999999999999999999999999999998888888776543                        45788999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ +.+++.++++.+.+.++++|+||||||+...+.+.+.+.++++.+                     +++|+.+++.
T Consensus        57 D~~-~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~  114 (270)
T PRK05650         57 DVR-DYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQ---------------------IAINLMGVVK  114 (270)
T ss_pred             cCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHccHHHHH
Confidence            999 999999999999999999999999999988778888889999988                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK  338 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~  338 (475)
                      +++.++|.|.+++.++||++||..+..+.++.+.|++||+++++|+++|+.|+.+.||+|++|+||+++|++........
T Consensus       115 ~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~  194 (270)
T PRK05650        115 GCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN  194 (270)
T ss_pred             HHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc
Confidence            99999999998878999999999999999999999999999999999999999999999999999999999765432111


Q ss_pred             ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCeeE
Q psy3252         339 PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYFS  418 (475)
Q Consensus       339 ~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~~~  418 (475)
                      +..            +..+...                              .  ....++++++|+.+++++++++..+
T Consensus       195 ~~~------------~~~~~~~------------------------------~--~~~~~~~~~vA~~i~~~l~~~~~~~  230 (270)
T PRK05650        195 PAM------------KAQVGKL------------------------------L--EKSPITAADIADYIYQQVAKGEFLI  230 (270)
T ss_pred             hhH------------HHHHHHH------------------------------h--hcCCCCHHHHHHHHHHHHhCCCEEE
Confidence            100            0000000                              0  0125789999999999999998766


Q ss_pred             EeCchhHHHHHHhcCCcch
Q psy3252         419 TVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       419 ~~~~~~~~~~~~~~~~~P~  437 (475)
                      +.+.....+ ..+.+++|.
T Consensus       231 ~~~~~~~~~-~~~~~~~p~  248 (270)
T PRK05650        231 LPHEQGRRA-WQLKRQAPQ  248 (270)
T ss_pred             ecCchHHHH-HHHHHHChH
Confidence            655443333 334467773

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-35  Score=283.74  Aligned_cols=235  Identities=25%  Similarity=0.351  Sum_probs=201.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.+++|+++||||++|||.++|++|+++|++|++++|+.+++++..+++.+.+                        .++
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~   58 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG------------------------GEA   58 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC------------------------Cce
Confidence            45779999999999999999999999999999999999988888777775533                        468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.+|++ +.+++..+++++.+.+|++|++|||||.... .++.+.+.++++.+                     +++|
T Consensus        59 ~~~~~D~~-~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n  116 (253)
T PRK06172         59 LFVACDVT-RDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAI---------------------MGVN  116 (253)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHH---------------------HHHh
Confidence            88999999 9999999999999999999999999998644 44677888898877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.+++.++++++|.|.+++.++||++||..+..+.++...|++||+|+++|+++++.|+.++||+||+|+||.|+|+++.
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~  196 (253)
T PRK06172        117 VKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFR  196 (253)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh
Confidence            99999999999999988878999999999999999999999999999999999999999999999999999999999877


Q ss_pred             ccccCCccc---cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPRE---TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~~---~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......+..   .....+.+|..+|+++++..++  ++.+...+++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~--l~~~~~~~~~G  241 (253)
T PRK06172        197 RAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLY--LCSDGASFTTG  241 (253)
T ss_pred             hhcccChHHHHHHhccCCCCCccCHHHHHHHHHH--HhCccccCcCC
Confidence            543222211   1123467899999999987544  45555555555

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-35  Score=283.87  Aligned_cols=236  Identities=25%  Similarity=0.302  Sum_probs=203.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +++++||++|||||++|||+++|++|+++|++|++++|++++++++.+.+...+                        .+
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~------------------------~~   60 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQG------------------------LS   60 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC------------------------ce
Confidence            346789999999999999999999999999999999999988887777775432                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+.++++|+||||||.....++.+.+.++++++                     +++|
T Consensus        61 ~~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n  118 (255)
T PRK07523         61 AHALAFDVT-DHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERL---------------------LRTN  118 (255)
T ss_pred             EEEEEccCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHH
Confidence            788999999 999999999999999999999999999987778888899999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.+++++++++.+.|.+++.|+||++||..+..+.++...|+++|++++.++++++.|++++||+||+|+||+++|++..
T Consensus       119 ~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~  198 (255)
T PRK07523        119 ISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNA  198 (255)
T ss_pred             hHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhh
Confidence            99999999999999998888999999999998889999999999999999999999999999999999999999999865


Q ss_pred             ccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......  .......+.+|+..|||++.+.+.  ++.+...+++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~~~~~~~~~G  242 (255)
T PRK07523        199 ALVADPEFSAWLEKRTPAGRWGKVEELVGACVF--LASDASSFVNG  242 (255)
T ss_pred             hhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCchhcCccC
Confidence            4322111  112224578899999999997544  45555555555

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=7.6e-35  Score=285.55  Aligned_cols=229  Identities=18%  Similarity=0.237  Sum_probs=186.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+.    .+                       .++.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~~-----------------------~~~~   54 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----HG-----------------------DAVV   54 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----cC-----------------------CceE
Confidence            46799999999999999999999999999999999998776655432    11                       4577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCH----HHHHHhhhhhhhccccchhhccccchhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTM----QDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ++.+|++ +.+++.++++++.+.++++|+||||||+... .++.+.+.    ++|+++                     +
T Consensus        55 ~~~~D~~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~---------------------~  112 (262)
T TIGR03325        55 GVEGDVR-SLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEV---------------------F  112 (262)
T ss_pred             EEEeccC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHh---------------------h
Confidence            8999999 9999999999999999999999999997532 34444443    356655                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.++++++++++|.|.+++ |+||+++|..+..+.++...|++||+|+++|+++|+.|++++ |+||+|+||+|.|+
T Consensus       113 ~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~  190 (262)
T TIGR03325       113 HINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSD  190 (262)
T ss_pred             eeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCC
Confidence            9999999999999999998754 899999999999888888999999999999999999999997 99999999999999


Q ss_pred             CCccccc---CC-----c--cccccccccCCCCChHHhhhccceeeecCCC-CCCCCC
Q psy3252         330 GFENEEK---SK-----P--RETSLISQTGGLYRPEVVKQSGLTITLCLPP-DTDTPG  376 (475)
Q Consensus       330 ~~~~~~~---~~-----~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~-~~~~~g  376 (475)
                      +......   ..     +  .......|++|+.+|||++++.  +|++++. ..+++|
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~--~~l~s~~~~~~~tG  246 (262)
T TIGR03325       191 LRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAY--VFFATRGDTVPATG  246 (262)
T ss_pred             CccccccccccccccccchhhhhhhcCCCCCCCChHHhhhhe--eeeecCCCcccccc
Confidence            8653210   00     0  1111235789999999999875  4455553 445555

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=7.8e-35  Score=291.01  Aligned_cols=233  Identities=19%  Similarity=0.219  Sum_probs=193.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      -.++||++|||||++|||+++|++|+++|++|++++|+.  +.++++.+.+...+                        .
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~------------------------~  100 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECG------------------------R  100 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcC------------------------C
Confidence            357899999999999999999999999999999988653  34555554443322                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.++.+|++ |.+++.++++++.+.+|++|++|||||... ..++.+.+.++++.+                     ++
T Consensus       101 ~~~~~~~Dl~-~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~  158 (294)
T PRK07985        101 KAVLLPGDLS-DEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKT---------------------FA  158 (294)
T ss_pred             eEEEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHH---------------------HH
Confidence            5778999999 999999999999999999999999999753 356778889999888                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|++.++++++|.|.+  .|+||++||..+..+.++..+|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       159 ~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~  236 (294)
T PRK07985        159 INVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_pred             HHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence            9999999999999999965  38999999999999999999999999999999999999999999999999999999997


Q ss_pred             CcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .........  .......+++|++.||||+++.+  |++++...+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~--fL~s~~~~~itG  282 (294)
T PRK07985        237 QISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYV--YLASQESSYVTA  282 (294)
T ss_pred             ccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHH--hhhChhcCCccc
Confidence            532211111  11222357889999999999864  566666666665

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=9.8e-35  Score=281.74  Aligned_cols=233  Identities=23%  Similarity=0.314  Sum_probs=194.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||.++|++|+++|++|++++|+.  .+++.+.+.+..                        .++
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~------------------------~~~   54 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALG------------------------RRF   54 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcC------------------------Cce
Confidence            357899999999999999999999999999999999975  234444443322                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++..+++++.+.++++|++|||||.....++.+.+.++++.+                     +++|+
T Consensus        55 ~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  112 (248)
T TIGR01832        55 LSLTADLS-DIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDV---------------------MNVNL  112 (248)
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------Hhhhh
Confidence            88999999 999999999999999999999999999987677777888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.+++++++.|.+++ .|+||++||..+..+.++...|++||+|+++++++++.|+.++||+||+|+||+|+|++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  192 (248)
T TIGR01832       113 KSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQ  192 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchh
Confidence            999999999999998765 6899999999998888888999999999999999999999999999999999999999865


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........  ......+.+++..|||+|++.+.  ++.+....++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~s~~~~~~~G  236 (248)
T TIGR01832       193 ALRADEDRNAAILERIPAGRWGTPDDIGGPAVF--LASSASDYVNG  236 (248)
T ss_pred             ccccChHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCccccCcCC
Confidence            43221111  11123467899999999998644  45555555554

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=275.50  Aligned_cols=239  Identities=21%  Similarity=0.259  Sum_probs=203.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|+++||||++|||+++|++|+++|++|++++|+.++++++.+++....+.                      .+++++.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~----------------------~~~~~~~   59 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPG----------------------IKVAVAA   59 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCC----------------------ceEEEEE
Confidence            689999999999999999999999999999999998888887777654321                      5688999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.+++.++++++.+.++++|++|||||+.....+.+.+.+.++..                     +++|+.+++
T Consensus        60 ~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  117 (248)
T PRK08251         60 LDVN-DHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKAT---------------------AETNFVAAL  117 (248)
T ss_pred             cCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 999999999999999999999999999987777777777777766                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCC-ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~-~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      .+++.+++.|.+.+.++||++||..+..+.++ ...|++||+++++++++++.|+...||+|++|+||+|+|++......
T Consensus       118 ~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~  197 (248)
T PRK08251        118 AQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS  197 (248)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc
Confidence            99999999999888899999999999888875 68999999999999999999999999999999999999996432110


Q ss_pred             CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCe
Q psy3252         337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNY  416 (475)
Q Consensus       337 ~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~  416 (475)
                                                                               ....++++++|+.+++++++++.
T Consensus       198 ---------------------------------------------------------~~~~~~~~~~a~~i~~~~~~~~~  220 (248)
T PRK08251        198 ---------------------------------------------------------TPFMVDTETGVKALVKAIEKEPG  220 (248)
T ss_pred             ---------------------------------------------------------CCccCCHHHHHHHHHHHHhcCCC
Confidence                                                                     01257899999999999999886


Q ss_pred             eEEeCchhHHHHHHhcCCcch
Q psy3252         417 FSTVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~P~  437 (475)
                      .++++...+....++.+++|.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~p~  241 (248)
T PRK08251        221 RAAVPWWPWAPLGALMRVLPL  241 (248)
T ss_pred             eEEcCcchHHHHHHHHHHCcH
Confidence            665543334333445577783

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=279.10  Aligned_cols=253  Identities=26%  Similarity=0.371  Sum_probs=206.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.                       ..+.++.+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~   57 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG-----------------------TVPEHRAL   57 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-----------------------CcceEEEe
Confidence            4799999999999999999999999999999999888887777765432                       23456799


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ +.+++.++++++.+.++++|+||||||.....++.+.+.++++..                     +++|+.|++.
T Consensus        58 D~~-~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~  115 (272)
T PRK07832         58 DIS-DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRM---------------------VDVNLMGPIH  115 (272)
T ss_pred             eCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------HHHHhHHHHH
Confidence            999 999999999999999999999999999877777888899999988                     9999999999


Q ss_pred             HHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         259 MTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       259 l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      ++++++|.|.+++ .|+||++||..+..+.++...|++||+|+.+|+++++.|+.++||+|++|+||.++|+++.+....
T Consensus       116 l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~  195 (272)
T PRK07832        116 VIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIA  195 (272)
T ss_pred             HHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhccccc
Confidence            9999999997653 589999999999889999999999999999999999999999999999999999999976543110


Q ss_pred             CccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCee
Q psy3252         338 KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYF  417 (475)
Q Consensus       338 ~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~~  417 (475)
                      ...           ...+.+...                           ...  .....++|++||+.++.++.++++.
T Consensus       196 ~~~-----------~~~~~~~~~---------------------------~~~--~~~~~~~~~~vA~~~~~~~~~~~~~  235 (272)
T PRK07832        196 GVD-----------REDPRVQKW---------------------------VDR--FRGHAVTPEKAAEKILAGVEKNRYL  235 (272)
T ss_pred             ccC-----------cchhhHHHH---------------------------HHh--cccCCCCHHHHHHHHHHHHhcCCeE
Confidence            000           000000000                           000  0123579999999999999999999


Q ss_pred             EEeCchhHHHHHHhcCCcch
Q psy3252         418 STVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~P~  437 (475)
                      +..+........ +.+++|.
T Consensus       236 ~~~~~~~~~~~~-~~~~~p~  254 (272)
T PRK07832        236 VYTSPDIRALYW-FKRKAWW  254 (272)
T ss_pred             EecCcchHHHHH-HHhcCch
Confidence            888876666644 4466673

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=283.74  Aligned_cols=228  Identities=20%  Similarity=0.253  Sum_probs=198.8

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.+++.+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+                        .
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~------------------------~   59 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG------------------------I   59 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC------------------------C
Confidence            3467889999999999999999999999999999999999988888777776432                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ +.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++
T Consensus        60 ~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~  117 (265)
T PRK07097         60 EAHGYVCDVT-DEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQV---------------------IDI  117 (265)
T ss_pred             ceEEEEcCCC-CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHh
Confidence            6888999999 999999999999999999999999999987777888899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|++.+++.++|.|.+++.|+||++||..+..+.++...|+++|+|+++|+++|+.|+.++||+||+|+||.|+|++.
T Consensus       118 n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  197 (265)
T PRK07097        118 DLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQT  197 (265)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccch
Confidence            99999999999999999888899999999999888899999999999999999999999999999999999999999976


Q ss_pred             cccccC----C--ccc--cccccccCCCCChHHhhhccceee
Q psy3252         332 ENEEKS----K--PRE--TSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       332 ~~~~~~----~--~~~--~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ......    .  +..  .....+.+++..|+|++.+.+.++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (265)
T PRK07097        198 APLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLA  239 (265)
T ss_pred             hhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHh
Confidence            543210    0  111  111336788999999998766644

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-34  Score=281.64  Aligned_cols=231  Identities=22%  Similarity=0.253  Sum_probs=194.1

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecC-----------hhHHHHHHHHHHHhCCCCcchhhhhHHHhh
Q psy3252          95 APTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARD-----------EKKLLQAQEEIKKACPNPKFIRFIEYEEIK  161 (475)
Q Consensus        95 ~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~-----------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (475)
                      .++||++|||||+  +|||+++|++|+++|++|++++|+           .+.+.++.+++.+.+               
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------------   67 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG---------------   67 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcC---------------
Confidence            5789999999999  499999999999999999997643           233334444444332               


Q ss_pred             hcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhh
Q psy3252         162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLA  241 (475)
Q Consensus       162 ~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (475)
                               .++.++.+|++ +.+++.++++++.+.+|++|+||||||.....++.+.+.++++.+              
T Consensus        68 ---------~~~~~~~~D~~-~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~--------------  123 (256)
T PRK12859         68 ---------VKVSSMELDLT-QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKH--------------  123 (256)
T ss_pred             ---------CeEEEEEcCCC-CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHH--------------
Confidence                     56889999999 999999999999999999999999999877778888999999988              


Q ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         242 LWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       242 ~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                             +++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++||+|+++|+++++.|+.++||+||+|
T Consensus       124 -------~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v  196 (256)
T PRK12859        124 -------YMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAI  196 (256)
T ss_pred             -------HHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEE
Confidence                   9999999999999999999887789999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         322 LPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       322 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +||+++|++.....   ........+.+++..|+|++++.+  +++++...+++|
T Consensus       197 ~PG~i~t~~~~~~~---~~~~~~~~~~~~~~~~~d~a~~~~--~l~s~~~~~~~G  246 (256)
T PRK12859        197 NPGPTDTGWMTEEI---KQGLLPMFPFGRIGEPKDAARLIK--FLASEEAEWITG  246 (256)
T ss_pred             EEccccCCCCCHHH---HHHHHhcCCCCCCcCHHHHHHHHH--HHhCccccCccC
Confidence            99999999654211   111112346788999999998765  455666666665

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3e-34  Score=287.37  Aligned_cols=234  Identities=21%  Similarity=0.236  Sum_probs=193.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh--HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK--KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +..++||++|||||++|||+++|+.|+++|++|++++++.+  ..+++.+.+...+                        
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~------------------------  105 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG------------------------  105 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcC------------------------
Confidence            34578999999999999999999999999999999887543  3455555554432                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      .++.++.+|++ +.++++++++++.+.++++|+||||||+.. ..++.+.+.++++.+                     +
T Consensus       106 ~~~~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~---------------------~  163 (300)
T PRK06128        106 RKAVALPGDLK-DEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDAT---------------------F  163 (300)
T ss_pred             CeEEEEecCCC-CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHH---------------------H
Confidence            46788999999 999999999999999999999999999864 356778899999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.|+++++++++|.|.+  .++||++||..++.+.++...|++||+|+++|+++|+.|+.++||+||+|+||+|+|+
T Consensus       164 ~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~  241 (300)
T PRK06128        164 KTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTP  241 (300)
T ss_pred             HHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCC
Confidence            99999999999999999874  3799999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +.........  .......+++|++.|+|++.+.+.  ++.....+++|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~--l~s~~~~~~~G  288 (300)
T PRK06128        242 LQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVL--LASQESSYVTG  288 (300)
T ss_pred             CcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHH--HhCccccCccC
Confidence            8543211111  111224578999999999988554  55555555554

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.5e-34  Score=280.76  Aligned_cols=229  Identities=25%  Similarity=0.252  Sum_probs=199.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +++++||+++||||++|||++++++|+++|++|++++|+.+.++++.+++....+.                      .+
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~----------------------~~   61 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPE----------------------RE   61 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCC----------------------Ce
Confidence            35678999999999999999999999999999999999998888888777654321                      56


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ +.++++++++++.+.++++|+||||||.....++.+.+.+++++.                     +++|
T Consensus        62 ~~~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n  119 (257)
T PRK09242         62 VHGLAADVS-DDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGI---------------------FETN  119 (257)
T ss_pred             EEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------Hhhh
Confidence            888999999 999999999999999999999999999876667778889999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.++++++++++|.|.+++.|+||++||..+..+.++.+.|++||++++.|+++++.|+.++||+||+|+||+|+|++..
T Consensus       120 ~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~  199 (257)
T PRK09242        120 LFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTS  199 (257)
T ss_pred             hHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccc
Confidence            99999999999999998878999999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCCccc--cccccccCCCCChHHhhhccceee
Q psy3252         333 NEEKSKPRE--TSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       333 ~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .........  .....+.+++.+|||++.+.+.++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  234 (257)
T PRK09242        200 GPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLC  234 (257)
T ss_pred             cccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            432221111  112347788999999998865544

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.1e-35  Score=288.17  Aligned_cols=222  Identities=29%  Similarity=0.403  Sum_probs=195.0

Q ss_pred             cCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeecCC
Q psy3252         105 GGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISK  182 (475)
Q Consensus       105 Gas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~  182 (475)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+..+                       .+  ++.+|++ 
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-----------------------~~--~~~~D~~-   54 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-----------------------AE--VIQCDLS-   54 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-----------------------SE--EEESCTT-
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-----------------------Cc--eEeecCc-
Confidence            566  9999999999999999999999999998888888877654                       23  4999999 


Q ss_pred             CHHHHHHHHHHHHHhc-CCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         183 DYENIRSALQPAMDRC-GPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       183 d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +.++++++++++.+.+ |+||+||||+|....    .++.+.+.++|+..                     +++|+.+++
T Consensus        55 ~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~  113 (241)
T PF13561_consen   55 DEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKT---------------------FDINVFSPF  113 (241)
T ss_dssp             SHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHH---------------------HHHHTHHHH
T ss_pred             chHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHH---------------------HHHHHHHHH
Confidence            9999999999999999 999999999998865    67888888999988                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCCCCCCCccccc
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ-SGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~-~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      .++++++|+|.++  |+||++||..+..+.+++..|+++|+|+++|+++||.||++ +|||||+|+||+|.|++......
T Consensus       114 ~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~  191 (241)
T PF13561_consen  114 LLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG  191 (241)
T ss_dssp             HHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT
T ss_pred             HHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcccc
Confidence            9999999988876  89999999999999999999999999999999999999999 99999999999999997554332


Q ss_pred             C--CccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         337 S--KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       337 ~--~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .  .........|++|+++|||||++  .+||+++..++++|-
T Consensus       192 ~~~~~~~~~~~~pl~r~~~~~evA~~--v~fL~s~~a~~itG~  232 (241)
T PF13561_consen  192 NEEFLEELKKRIPLGRLGTPEEVANA--VLFLASDAASYITGQ  232 (241)
T ss_dssp             HHHHHHHHHHHSTTSSHBEHHHHHHH--HHHHHSGGGTTGTSE
T ss_pred             ccchhhhhhhhhccCCCcCHHHHHHH--HHHHhCccccCccCC
Confidence            1  12223345699999999999987  567888888888873

...

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=276.37  Aligned_cols=187  Identities=18%  Similarity=0.205  Sum_probs=168.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~------------------------~~~~   57 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT------------------------DNVY   57 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------------------------CCeE
Confidence            5789999999999999999999999999999999999999998888876543                        4567


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcC-CccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCG-PVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g-~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .+.+|++ +.++++++++++.+++| +||+||||||.. ...++.+.+.+++.+.                     +++|
T Consensus        58 ~~~~D~~-~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~---------------------~~~~  115 (227)
T PRK08862         58 SFQLKDF-SQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQ---------------------LSSL  115 (227)
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHH---------------------HHHh
Confidence            8899999 99999999999999999 999999999864 3457788888888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +.+++.+++.++|+|.+++ +|+||++||..+.   ++...|++||+|+.+|+++|+.|++++||+||+|+||+++|+.
T Consensus       116 ~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        116 ASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            9999999999999998764 6999999997653   5678999999999999999999999999999999999999993

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.1e-34  Score=279.95  Aligned_cols=229  Identities=21%  Similarity=0.244  Sum_probs=187.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+.||+++||||++|||+++|++|+++|++|++++++.+..   .+++..                          ..+.
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~--------------------------~~~~   54 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE--------------------------KGVF   54 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh--------------------------CCCe
Confidence            46789999999999999999999999999999887654322   122221                          1256


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        55 ~~~~Dl~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  112 (255)
T PRK06463         55 TIKCDVG-NRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKM---------------------IKINLN  112 (255)
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------HhHhhH
Confidence            7899999 999999999999999999999999999976677778888999888                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccc-cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      |++++++.++|.|.+++.|+||++||..+.. +.++.+.|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       113 ~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  192 (255)
T PRK06463        113 GAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS  192 (255)
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc
Confidence            9999999999999987789999999998874 456778999999999999999999999999999999999999998754


Q ss_pred             cccCCc-----cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKP-----RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~-----~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......     .......+++++.+|||++++.+.+  ..+....++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~s~~~~~~~G  238 (255)
T PRK06463        193 GKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFL--ASDDARYITG  238 (255)
T ss_pred             ccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHH--cChhhcCCCC
Confidence            221111     1112234778999999999886654  4444445554

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=4.3e-34  Score=282.77  Aligned_cols=234  Identities=21%  Similarity=0.257  Sum_probs=193.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..+++.+++.. .                        .++
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~------------------------~~~   68 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-E------------------------PNV   68 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-C------------------------Cce
Confidence            356799999999999999999999999999999999998777666655421 1                        467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC--CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .++.+|++ |.++++++++.+.+.+|++|+||||||....  .++.+.+.++++.+                     +++
T Consensus        69 ~~~~~Dl~-d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~---------------------~~~  126 (280)
T PLN02253         69 CFFHCDVT-VEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKV---------------------FDV  126 (280)
T ss_pred             EEEEeecC-CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHH---------------------HhH
Confidence            89999999 9999999999999999999999999998643  45677888999887                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|++++++++++.|.+++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||.|+|++.
T Consensus       127 N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~  206 (280)
T PLN02253        127 NVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALA  206 (280)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccc
Confidence            99999999999999998877899999999999888888889999999999999999999999999999999999999975


Q ss_pred             cccccCCccccc-------c---cccc-CCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKPRETS-------L---ISQT-GGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~~~~~-------~---~~~~-~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ............       .   ..++ ++...|+|++++.+.  ++++...+++|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~--l~s~~~~~i~G  260 (280)
T PLN02253        207 LAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLF--LASDEARYISG  260 (280)
T ss_pred             ccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHh--hcCcccccccC
Confidence            432211110000       0   1122 556899999998654  55565566555

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=4.6e-34  Score=278.74  Aligned_cols=234  Identities=22%  Similarity=0.305  Sum_probs=198.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+                        .++
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~------------------------~~~   62 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG------------------------GQA   62 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC------------------------CcE
Confidence            45789999999999999999999999999999999999988888777775432                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++.+.+.++++|++|||||.....++ +.+.++++..                     +++|+
T Consensus        63 ~~~~~D~~-~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~---------------------~~~n~  119 (255)
T PRK06113         63 FACRCDIT-SEQELSALADFALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRA---------------------YELNV  119 (255)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHH---------------------HHHhh
Confidence            78899999 9999999999999999999999999998755544 5778888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .++++++++++|.|.+.+.|+||++||.++..+.++...|++||+|+++|+++++.|+.++||+||+|+||.++|+++..
T Consensus       120 ~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~  199 (255)
T PRK06113        120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS  199 (255)
T ss_pred             hhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc
Confidence            99999999999999877778999999999999999999999999999999999999999999999999999999998764


Q ss_pred             cccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...... .......+.++.+.|||++++.+.+  +.+...+++|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l--~~~~~~~~~G  241 (255)
T PRK06113        200 VITPEIEQKMLQHTPIRRLGQPQDIANAALFL--CSPAASWVSG  241 (255)
T ss_pred             ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCccccCccC
Confidence            321111 1111234668899999999886664  4555555544

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=4.1e-34  Score=278.86  Aligned_cols=231  Identities=28%  Similarity=0.364  Sum_probs=197.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||++|||.++++.|+++|++|++++|+.+.++++..++...+                        .++.++.
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~~   57 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG------------------------GKAIAVK   57 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CeEEEEE
Confidence            7899999999999999999999999999999999988888877775432                        4577899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.++++++++++.++++++|+||||||+....++.+.+.++++.+                     +++|+.+++
T Consensus        58 ~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  115 (256)
T PRK08643         58 ADVS-DRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKV---------------------YNINVGGVI  115 (256)
T ss_pred             CCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhhHHHH
Confidence            9999 999999999999999999999999999877677888888999887                     999999999


Q ss_pred             HHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         258 HMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       258 ~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      .+++.+++.|.+.+ .|+||++||..+..+.++...|++||++++.|+++++.|+.++||+||+|+||+|+|+++.+...
T Consensus       116 ~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~  195 (256)
T PRK08643        116 WGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAH  195 (256)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHh
Confidence            99999999998764 48999999999999999999999999999999999999999999999999999999998764321


Q ss_pred             C------Cccc-----cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         337 S------KPRE-----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       337 ~------~~~~-----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .      .+..     .....+.+++..|||++++.  .+++++....++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~--~~L~~~~~~~~~G  244 (256)
T PRK08643        196 QVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCV--SFLAGPDSDYITG  244 (256)
T ss_pred             hhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHH--HHHhCccccCccC
Confidence            1      1110     11124678999999999884  4455655555555

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=280.58  Aligned_cols=232  Identities=25%  Similarity=0.262  Sum_probs=195.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.....                       .++
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------~~~   59 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-----------------------VDV   59 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcC-----------------------Cce
Confidence            356799999999999999999999999999999999999888888777765432                       467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++..+++.    ++++|++|||||+....++.+.+.++|+.+                     +++|+
T Consensus        60 ~~~~~D~~-~~~~~~~~~~~----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  113 (259)
T PRK06125         60 AVHALDLS-SPEAREQLAAE----AGDIDILVNNAGAIPGGGLDDVDDAAWRAG---------------------WELKV  113 (259)
T ss_pred             EEEEecCC-CHHHHHHHHHH----hCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            88999999 99998887753    589999999999887778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .++++++++++|.|.+++.|+||++||..+..+.+++..|+++|+|+++|+++++.|+.++||+||+|+||+|+|++..+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  193 (259)
T PRK06125        114 FGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLT  193 (259)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHH
Confidence            99999999999999988789999999999988888899999999999999999999999999999999999999997543


Q ss_pred             cccC-------Ccc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKS-------KPR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~-------~~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ....       .+.   ......+.+++..|+|++++.+  +++.+...+++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~--~l~~~~~~~~~G  244 (259)
T PRK06125        194 LLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVA--FLASPRSGYTSG  244 (259)
T ss_pred             HHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHH--HHcCchhccccC
Confidence            2110       010   0111246789999999999854  445555555555

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.8e-34  Score=308.39  Aligned_cols=228  Identities=27%  Similarity=0.303  Sum_probs=194.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ..||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .++..
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~~~  319 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG---------------------------DEHLS  319 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------------------------CceeE
Confidence            468999999999999999999999999999999999888877665441                           34667


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +.+|++ |.++++++++++.+++|+||+||||||+.. ..++.+.+.++|+.+                     +++|+.
T Consensus       320 ~~~D~~-~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~n~~  377 (520)
T PRK06484        320 VQADIT-DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRV---------------------YDVNLS  377 (520)
T ss_pred             EEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHH---------------------HHhCcH
Confidence            899999 999999999999999999999999999864 356778889999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |++++++.++|.|  ++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       378 ~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  455 (520)
T PRK06484        378 GAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLAL  455 (520)
T ss_pred             HHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhh
Confidence            9999999999999  34589999999999999999999999999999999999999999999999999999999987643


Q ss_pred             ccCCcc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......   ......+++++.+|||++++.+.  ++.+....++|
T Consensus       456 ~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~--l~s~~~~~~~G  498 (520)
T PRK06484        456 KASGRADFDSIRRRIPLGRLGDPEEVAEAIAF--LASPAASYVNG  498 (520)
T ss_pred             ccccHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCccccCccC
Confidence            221111   11123477899999999988655  45555555555

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-33  Score=274.40  Aligned_cols=243  Identities=26%  Similarity=0.384  Sum_probs=206.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++++++|||||++|||.+++++|+++|++|++++|+.+.++++..++ .. +                       .++
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~-~-----------------------~~~   55 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY-P-----------------------GRH   55 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc-C-----------------------Cce
Confidence            3567899999999999999999999999999999999998888777666 21 1                       468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++.+.+ ++++|+||||||.....++.+.+.++++.+                     +++|+
T Consensus        56 ~~~~~D~~-d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  112 (263)
T PRK09072         56 RWVVADLT-SEAGREAVLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERL---------------------LALNL  112 (263)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHH---------------------Hhhhh
Confidence            88999999 99999999999876 899999999999877677788888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|++++++.+++.|.+++.|+||++||..+..+.++...|++||+++.+++++++.|+.++||+|++|+||.++|++...
T Consensus       113 ~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~  192 (263)
T PRK09072        113 TAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE  192 (263)
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh
Confidence            99999999999999988789999999999999999999999999999999999999999999999999999999986432


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhc
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALK  413 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~  413 (475)
                      .....                                       .   ..         ......+|+++|+.++..+++
T Consensus       193 ~~~~~---------------------------------------~---~~---------~~~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        193 AVQAL---------------------------------------N---RA---------LGNAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             hcccc---------------------------------------c---cc---------ccCCCCCHHHHHHHHHHHHhC
Confidence            11000                                       0   00         001256899999999999999


Q ss_pred             CCeeEEeCchhHHHHHHhcCCcc
Q psy3252         414 GNYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       414 g~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      +...+++++..+++.. +.+++|
T Consensus       222 ~~~~~~~~~~~~~~~~-~~~~~p  243 (263)
T PRK09072        222 ERAERWLGWPEKLFVR-LNGLLP  243 (263)
T ss_pred             CCCEEecCchHHHHHH-HHHHCh
Confidence            9888888886666664 347777

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-34  Score=278.83  Aligned_cols=231  Identities=23%  Similarity=0.305  Sum_probs=187.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++|+. ..+++.+++...+                        .++.
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~------------------------~~~~   59 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAG------------------------GEAL   59 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcC------------------------CeEE
Confidence            36789999999999999999999999999999999985 3445555554332                        4678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ +.+++.++++++.+.++++|+||||||... ..++.+.+.++++..                     +++|+
T Consensus        60 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~n~  117 (260)
T PRK12823         60 ALTADLE-TYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAE---------------------IRRSL  117 (260)
T ss_pred             EEEEeCC-CHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHH---------------------HHHHh
Confidence            8999999 999999999999999999999999999653 467778888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++++++.++|.|.+++.|+||++||..+.  .++..+|++||+|+++|+++|+.|++++||+||+|+||+|+||+...
T Consensus       118 ~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (260)
T PRK12823        118 FPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRV  195 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhh
Confidence            9999999999999998878999999998764  23467899999999999999999999999999999999999996321


Q ss_pred             cc------cCCcc-------ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EE------KSKPR-------ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~------~~~~~-------~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..      .....       ......++++.+.|||++++.+.  ++++....++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~s~~~~~~~g  249 (260)
T PRK12823        196 PRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILF--LASDEASYITG  249 (260)
T ss_pred             HHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHH--HcCcccccccC
Confidence            10      00000       01113477899999999998544  55555555554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-34  Score=282.15  Aligned_cols=230  Identities=22%  Similarity=0.246  Sum_probs=191.2

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .+.+++++|++|||||++|||+++|++|+++|++|++++++.+.++.                                 
T Consensus         2 ~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---------------------------------   48 (266)
T PRK06171          2 QDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---------------------------------   48 (266)
T ss_pred             cccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---------------------------------
Confidence            44567889999999999999999999999999999999998654210                                 


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC---------cccCCHHHHHHhhhhhhhccccchhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT---------LEEMTMQDIKVMEQPLWLRGYHTRLA  241 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (475)
                      .++.++.+|++ +.++++++++++.+.++++|+||||||......         ..+.+.++|+.+              
T Consensus        49 ~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  113 (266)
T PRK06171         49 ENYQFVPTDVS-SAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKM--------------  113 (266)
T ss_pred             CceEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHH--------------
Confidence            34678999999 999999999999999999999999999764322         235678888877              


Q ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         242 LWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       242 ~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                             +++|+.+++++++++++.|.+++.|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|
T Consensus       114 -------~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v  186 (266)
T PRK06171        114 -------FNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGV  186 (266)
T ss_pred             -------HhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence                   9999999999999999999988889999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCC-CCCCcccccC--------C-c---ccccc--ccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         322 LPPDTD-TPGFENEEKS--------K-P---RETSL--ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       322 ~PG~v~-T~~~~~~~~~--------~-~---~~~~~--~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +||.++ |++.......        . .   .....  ..|++|+++||||+++.  .|++++..+.++|-
T Consensus       187 ~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~--~fl~s~~~~~itG~  255 (266)
T PRK06171        187 APGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLV--CYLLSDRASYITGV  255 (266)
T ss_pred             eccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhhe--eeeeccccccceee
Confidence            999997 6653311100        0 0   00111  45789999999999874  55677777777763

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.4e-35  Score=290.99  Aligned_cols=252  Identities=14%  Similarity=0.087  Sum_probs=181.1

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCC-------CCcchhhhhHHHhhhc
Q psy3252          93 YLAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACP-------NPKFIRFIEYEEIKKA  163 (475)
Q Consensus        93 ~~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~  163 (475)
                      +.++.||++|||||+  +|||+++|+.|+++|++|++.++. +.++...........       ................
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV-PIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc-chhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            356789999999996  999999999999999999998765 222222221111000       0000000000000000


Q ss_pred             CCCCCccceEEEEEeecCC-------CHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhhhhhc
Q psy3252         164 CPNPKFIRFIEYVSLDISK-------DYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQPLWLR  234 (475)
Q Consensus       164 ~~~~~~~~~v~~~~~Dvt~-------d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~~~~~  234 (475)
                      .      ....-+.+|+++       +.++++++++++.+++|++|+||||||+..  ..++.+.+.++|+++       
T Consensus        82 ~------~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~-------  148 (299)
T PRK06300         82 F------DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAA-------  148 (299)
T ss_pred             c------CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHH-------
Confidence            0      011112222220       235699999999999999999999999754  467889999999988       


Q ss_pred             cccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCCh-hhHHHHHHHHHHHHHHHHHHcc
Q psy3252         235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLA-AYTSSKFALKGFAEALYMEVKQ  313 (475)
Q Consensus       235 ~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~-~Y~aSKaAl~~l~~sLa~El~~  313 (475)
                                    +++|+.|+++++++++|.|.++  |+||+++|..+..+.|++. .|++||+|+++|+++|+.|+++
T Consensus       149 --------------~~vNl~g~~~l~~a~~p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~  212 (299)
T PRK06300        149 --------------LSTSSYSFVSLLSHFGPIMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGR  212 (299)
T ss_pred             --------------HHHHhHHHHHHHHHHHHHhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCC
Confidence                          9999999999999999999754  8999999999988888875 8999999999999999999987


Q ss_pred             -CCcEEEEEeCCCCCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         314 -SGLTITLCLPPDTDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       314 -~gIrVn~V~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                       +|||||+|+||.|+|++.........  .......+++|...||||+.+.++  ++++...+++|
T Consensus       213 ~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~--L~s~~~~~itG  276 (299)
T PRK06300        213 RWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAF--LVSPLASAITG  276 (299)
T ss_pred             CCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCccccCCCC
Confidence             59999999999999998643211101  111123477899999999987544  56766667666

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=277.91  Aligned_cols=184  Identities=32%  Similarity=0.469  Sum_probs=168.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++++++||||+||||+++|++|+++|++|++++|+.++++..                                ..++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--------------------------------~~~~~~   50 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--------------------------------PGVELL   50 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--------------------------------CCCeeE
Confidence            467999999999999999999999999999999987543210                                346789


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.++++++++.+.+.+|++|+||||||+...+++.+.+.++++.+                     +++|+.|+
T Consensus        51 ~~D~~-d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~g~  108 (270)
T PRK06179         51 ELDVT-DDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQAL---------------------FDTNVFGI  108 (270)
T ss_pred             EeecC-CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHH---------------------HHHHhHHH
Confidence            99999 999999999999999999999999999987778888899999888                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +.+++.++|.|++++.|+||++||..+..+.++...|++||+++++|+++|+.|++++||+|++|+||+++|++..+.
T Consensus       109 ~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~  186 (270)
T PRK06179        109 LRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANA  186 (270)
T ss_pred             HHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence            999999999999988899999999999999999999999999999999999999999999999999999999976543

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-34  Score=276.20  Aligned_cols=231  Identities=23%  Similarity=0.282  Sum_probs=191.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++....                        .++.++.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~~   56 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP------------------------GQVLTVQ   56 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcEEEEE
Confidence            5899999999999999999999999999999999888887777665432                        4578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |+++++++++++.+.++++|+||||||.....++.+.+.++|+.+                     +++|+.|++
T Consensus        57 ~D~~-~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  114 (252)
T PRK07677         57 MDVR-NPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSV---------------------IDIVLNGTF  114 (252)
T ss_pred             ecCC-CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHH---------------------HhHhhHHHH
Confidence            9999 999999999999999999999999999765567778889999888                     999999999


Q ss_pred             HHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCCCCCCCc-cc
Q psy3252         258 HMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ-SGLTITLCLPPDTDTPGFE-NE  334 (475)
Q Consensus       258 ~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~-~gIrVn~V~PG~v~T~~~~-~~  334 (475)
                      ++++++++.|.+++ .|+||++||..+..+.++...|++||+|+++|+++|+.|+.+ +||+||+|+||+|+|+... ..
T Consensus       115 ~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~  194 (252)
T PRK07677        115 YCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKL  194 (252)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccc
Confidence            99999999987653 589999999999888888999999999999999999999975 7999999999999965332 11


Q ss_pred             ccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......  ......+.+++.+|||++++...  ++.+....++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~~~~~~~~~g  236 (252)
T PRK07677        195 WESEEAAKRTIQSVPLGRLGTPEEIAGLAYF--LLSDEAAYING  236 (252)
T ss_pred             cCCHHHHHHHhccCCCCCCCCHHHHHHHHHH--HcCccccccCC
Confidence            111111  11112367899999999986555  44444445554

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=277.25  Aligned_cols=234  Identities=23%  Similarity=0.286  Sum_probs=196.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|+++||||++|||+++|++|+++|++|++++|+ .+..+.+.+++...+                        .++
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~------------------------~~~   59 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAG------------------------GEA   59 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC------------------------CeE
Confidence            4789999999999999999999999999999998885 455566666665432                        467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++.+.+.++++|+||||||.....++.+.+.+++++.                     +++|+
T Consensus        60 ~~~~~Dl~-~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  117 (261)
T PRK08936         60 IAVKGDVT-VESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKV---------------------INTNL  117 (261)
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhh
Confidence            78999999 999999999999999999999999999877777778888999887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++++++.+++.|.+++ .|+||++||..+..+.++..+|++||+|+++|+++|+.|+.++||+||+|+||+|+|++..
T Consensus       118 ~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  197 (261)
T PRK08936        118 TGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccc
Confidence            999999999999998765 5899999999999899999999999999999999999999999999999999999999865


Q ss_pred             ccccCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .........  .....+.+++..|||++++.+.  +++.....++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~s~~~~~~~G  241 (261)
T PRK08936        198 EKFADPKQRADVESMIPMGYIGKPEEIAAVAAW--LASSEASYVTG  241 (261)
T ss_pred             cccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCcccCCccC
Confidence            322111111  1123477899999999988554  55555555555

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=4e-33  Score=276.59  Aligned_cols=195  Identities=26%  Similarity=0.324  Sum_probs=176.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+                        .++
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~   57 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG------------------------AEV   57 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC------------------------CeE
Confidence            35678999999999999999999999999999999999888888777765432                        468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++.+.+.++++|+||||||.....++.+.+.++++..                     +++|+
T Consensus        58 ~~~~~D~~-d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  115 (287)
T PRK06194         58 LGVRTDVS-DAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWV---------------------LGVNL  115 (287)
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------Hhhcc
Confidence            88999999 999999999999999999999999999987777888888999887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCC------CeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc--CCcEEEEEeCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGR------GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ--SGLTITLCLPPD  325 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~------g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~--~gIrVn~V~PG~  325 (475)
                      .|+++++++++|.|.++..      |+||++||.++..+.++.+.|++||+++++|+++++.|+..  .+|++++|+||.
T Consensus       116 ~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~  195 (287)
T PRK06194        116 WGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYF  195 (287)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCc
Confidence            9999999999999988754      79999999999999899999999999999999999999874  579999999999


Q ss_pred             CCCCCCccc
Q psy3252         326 TDTPGFENE  334 (475)
Q Consensus       326 v~T~~~~~~  334 (475)
                      |.|++....
T Consensus       196 i~t~~~~~~  204 (287)
T PRK06194        196 VPTGIWQSE  204 (287)
T ss_pred             ccCcccccc
Confidence            999977643

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=275.33  Aligned_cols=236  Identities=25%  Similarity=0.303  Sum_probs=203.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+                        .+
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~   61 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG------------------------GA   61 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcC------------------------Cc
Confidence            566889999999999999999999999999999999999988888877776533                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ +.+++.++++++.+.++++|++|||||.....++.+.+.++++.+                     +++|
T Consensus        62 ~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n  119 (256)
T PRK06124         62 AEALAFDIA-DEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRAL---------------------LETD  119 (256)
T ss_pred             eEEEEccCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHH
Confidence            788999999 999999999999999999999999999877777888889999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.+++.+++.+++.|.+++.|+||++||..+..+.++..+|++||+|+++++++++.|+++.||+||+|+||+++|++..
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~  199 (256)
T PRK06124        120 LVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNA  199 (256)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchh
Confidence            99999999999999988888999999999999999999999999999999999999999999999999999999999755


Q ss_pred             ccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......  .......+.+++..|+|++++.+.  ++.+...+++|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--l~~~~~~~~~G  243 (256)
T PRK06124        200 AMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVF--LASPAASYVNG  243 (256)
T ss_pred             hhccChHHHHHHHhcCCCCCCCCHHHHHHHHHH--HcCcccCCcCC
Confidence            4322111  112223467889999999988655  44555555555

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=277.33  Aligned_cols=232  Identities=22%  Similarity=0.286  Sum_probs=195.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.+.+|++|||||++|||.++|+.|+++|++|++++|+.+.++++.+++.                           .++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---------------------------~~~   54 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---------------------------PAA   54 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---------------------------Cce
Confidence            45779999999999999999999999999999999999888776655431                           347


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+.++++|+||||||.....++.+.+.++++..                     +++|+
T Consensus        55 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  112 (257)
T PRK07067         55 IAVSLDVT-RQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRL---------------------FAVNV  112 (257)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHhhh
Confidence            78999999 999999999999999999999999999876677888888999887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.+++++++.|.+++ .|+||++||..+..+.++...|++||++++.|+++++.|+.++||+||+|+||+|+|+++.
T Consensus       113 ~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~  192 (257)
T PRK07067        113 KGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWD  192 (257)
T ss_pred             hhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhh
Confidence            999999999999998764 4799999999998899999999999999999999999999999999999999999999865


Q ss_pred             ccccC-------Cc-c---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKS-------KP-R---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~-------~~-~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....       .+ .   ......+++++..|||||++.+.  +++.....++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~s~~~~~~~g  245 (257)
T PRK07067        193 QVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALF--LASADADYIVA  245 (257)
T ss_pred             hhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHH--HhCcccccccC
Confidence            32110       00 0   01113478899999999987544  55555555554

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-33  Score=275.53  Aligned_cols=231  Identities=24%  Similarity=0.306  Sum_probs=193.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|++|||||++|||+++|++|+++|++|+++++ +.+.++++.+++...+                        .++.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~   57 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG------------------------VRAEIR   57 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC------------------------CceEEE
Confidence            689999999999999999999999999988764 6666777766665433                        568889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.++++++++++.+.++++|+||||||......+.+.+.++++.+                     +++|+.++
T Consensus        58 ~~Dl~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  115 (256)
T PRK12743         58 QLDLS-DLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKI---------------------FTVDVDGA  115 (256)
T ss_pred             EccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhHHH
Confidence            99999 999999999999999999999999999876667778888999887                     99999999


Q ss_pred             HHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         257 IHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      +++++++++.|.+++ .|+||++||..+..+.++...|+++|+++.+++++|+.++.++||+||+|+||+++|++.....
T Consensus       116 ~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~  195 (256)
T PRK12743        116 FLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD  195 (256)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC
Confidence            999999999997654 5899999999999999999999999999999999999999999999999999999999765422


Q ss_pred             cCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         336 KSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...........+.++...|||++.+...  ++.+....++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~~~~~~~~~G  234 (256)
T PRK12743        196 SDVKPDSRPGIPLGRPGDTHEIASLVAW--LCSEGASYTTG  234 (256)
T ss_pred             hHHHHHHHhcCCCCCCCCHHHHHHHHHH--HhCccccCcCC
Confidence            1111111123467889999999988544  44555555554

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=7.1e-34  Score=277.86  Aligned_cols=222  Identities=24%  Similarity=0.284  Sum_probs=185.3

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAK----RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~----~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++||||++|||+++|++|++    +|++|++++|+.+.++++.+++....+.                      .++.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~----------------------~~v~~   59 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSG----------------------LRVVR   59 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCC----------------------ceEEE
Confidence            689999999999999999997    7999999999999999888888653211                      46888


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCc----cEEEEccccccCC--CcccC-CHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPV----YMLVNCAGMALCG--TLEEM-TMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~I----DvLVnnAG~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      +.+|++ +.++++++++++.+.+|.+    |+||||||+....  ...+. +.++++.+                     
T Consensus        60 ~~~Dl~-~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~---------------------  117 (256)
T TIGR01500        60 VSLDLG-AEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNY---------------------  117 (256)
T ss_pred             EEeccC-CHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHH---------------------
Confidence            999999 9999999999998887753    6999999975431  22323 46777777                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCC--CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRG--RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      +++|+.|++++++.++|.|.+++  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|
T Consensus       118 ~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v  197 (256)
T TIGR01500       118 WALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVL  197 (256)
T ss_pred             HHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcc
Confidence            99999999999999999998753  4799999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccC--Cc---cccccccccCCCCChHHhhhccceee
Q psy3252         327 DTPGFENEEKS--KP---RETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       327 ~T~~~~~~~~~--~~---~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      +|+|.....+.  .+   .......+++|+.+|||+|.+.+.++
T Consensus       198 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~  241 (256)
T TIGR01500       198 DTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLL  241 (256)
T ss_pred             cchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            99987643211  11   11223457899999999999877765

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-33  Score=268.11  Aligned_cols=235  Identities=23%  Similarity=0.192  Sum_probs=201.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.....                       .++.++.
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-----------------------~~~~~~~   57 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA-----------------------VAVSTHE   57 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC-----------------------CeEEEEe
Confidence            36899999999999999999999999999999999888877776654321                       5688999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.++++++++++.+   .+|++|||||........+.+.+++...                     +++|+.+++
T Consensus        58 ~Dl~-~~~~~~~~~~~~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  112 (243)
T PRK07102         58 LDIL-DTASHAAFLDSLPA---LPDIVLIAVGTLGDQAACEADPALALRE---------------------FRTNFEGPI  112 (243)
T ss_pred             cCCC-ChHHHHHHHHHHhh---cCCEEEECCcCCCCcccccCCHHHHHHH---------------------HHhhhHHHH
Confidence            9999 99999999988765   4799999999876666777788888877                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      +++++++|.|.+++.++||++||..+..+.++...|++||+++.+++++++.|+.+.||+|++|+||.++|++.....  
T Consensus       113 ~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~--  190 (243)
T PRK07102        113 ALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK--  190 (243)
T ss_pred             HHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC--
Confidence            999999999998888999999999998888999999999999999999999999999999999999999998533210  


Q ss_pred             CccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCee
Q psy3252         338 KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYF  417 (475)
Q Consensus       338 ~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~~  417 (475)
                                                                    .|        .....+|+++|+.+++.+++++..
T Consensus       191 ----------------------------------------------~~--------~~~~~~~~~~a~~i~~~~~~~~~~  216 (243)
T PRK07102        191 ----------------------------------------------LP--------GPLTAQPEEVAKDIFRAIEKGKDV  216 (243)
T ss_pred             ----------------------------------------------CC--------ccccCCHHHHHHHHHHHHhCCCCE
Confidence                                                          00        112578999999999999999999


Q ss_pred             EEeCchhHHHHHHhcCCcch
Q psy3252         418 STVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~P~  437 (475)
                      +++++..+.+..+. +++|.
T Consensus       217 i~~~~~~~~~~~~~-~~~p~  235 (243)
T PRK07102        217 IYTPWFWRLIMLII-RSIPE  235 (243)
T ss_pred             EEcCchHHHHHHHH-HhCCH
Confidence            99987777666544 56773

>KOG4169|consensus

Probab=100.00  E-value=6.4e-35  Score=270.15  Aligned_cols=190  Identities=24%  Similarity=0.331  Sum_probs=170.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+++||++++|||.||||++++++|+++|..+.+++-+.+.. +...+|++..+.                      .++
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~----------------------~~v   57 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPS----------------------VSV   57 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCC----------------------ceE
Confidence            578899999999999999999999999999888877776664 456677777664                      679


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .+++|||+ +..+++++++++.+.||+||++|||||+..        +.+|++.                     ++||+
T Consensus        58 ~F~~~DVt-~~~~~~~~f~ki~~~fg~iDIlINgAGi~~--------dkd~e~T---------------------i~vNL  107 (261)
T KOG4169|consen   58 IFIKCDVT-NRGDLEAAFDKILATFGTIDILINGAGILD--------DKDWERT---------------------INVNL  107 (261)
T ss_pred             EEEEeccc-cHHHHHHHHHHHHHHhCceEEEEccccccc--------chhHHHh---------------------hccch
Confidence            99999999 899999999999999999999999999863        4557766                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC---CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHH--HccCCcEEEEEeCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRG---RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~E--l~~~gIrVn~V~PG~v~T  328 (475)
                      .|.++.+..++|+|.++.   +|-|||+||..|+.|.|-.+.|++||+++.+||||||.+  +.+.||++++||||+++|
T Consensus       108 tgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t  187 (261)
T KOG4169|consen  108 TGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT  187 (261)
T ss_pred             hhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchH
Confidence            999999999999998764   478999999999999999999999999999999999886  467899999999999999


Q ss_pred             CCCccccc
Q psy3252         329 PGFENEEK  336 (475)
Q Consensus       329 ~~~~~~~~  336 (475)
                      .+.++...
T Consensus       188 ~l~~~~~~  195 (261)
T KOG4169|consen  188 DLAENIDA  195 (261)
T ss_pred             HHHHHHHh
Confidence            98877654

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=274.52  Aligned_cols=227  Identities=23%  Similarity=0.260  Sum_probs=191.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++        ....                        ..+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~------------------------~~~   49 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDG------------------------RPA   49 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcC------------------------Cce
Confidence            46789999999999999999999999999999999998754        0111                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.++++++++.+.+.++++|+||||||+....++.+.+.++++++                     +++|+
T Consensus        50 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  107 (252)
T PRK07856         50 EFHAADVR-DPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKI---------------------VELNL  107 (252)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            78999999 999999999999999999999999999877677778888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhC-CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.+++.+++.|.++ +.|+||++||..+..+.++...|++||+++++|+++++.|++++ |+||+|+||.|+|++..
T Consensus       108 ~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~  186 (252)
T PRK07856        108 LAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSE  186 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHh
Confidence            99999999999999875 45899999999999999999999999999999999999999988 99999999999999755


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ........  ......+.++...|||++++.+.  ++.+....++|.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~--L~~~~~~~i~G~  231 (252)
T PRK07856        187 LHYGDAEGIAAVAATVPLGRLATPADIAWACLF--LASDLASYVSGA  231 (252)
T ss_pred             hhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHH--HcCcccCCccCC
Confidence            32211111  11223477899999999988554  456655666653

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=273.32  Aligned_cols=234  Identities=26%  Similarity=0.332  Sum_probs=195.6

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .+++++||++|||||++|||.++|++|+++|++|++++|+.+.. +...++..                          .
T Consensus         9 ~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~--------------------------~   61 (255)
T PRK06841          9 LAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLG--------------------------G   61 (255)
T ss_pred             hhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhC--------------------------C
Confidence            34678899999999999999999999999999999999987532 22222211                          3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ +.++++++++++.+.++++|++|||||.....++.+.+.++++..                     +++
T Consensus        62 ~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~  119 (255)
T PRK06841         62 NAKGLVCDVS-DSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKT---------------------IDI  119 (255)
T ss_pred             ceEEEEecCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHH
Confidence            4668999999 999999999999999999999999999887677777888888877                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|++++++.+++.|.+++.|+||++||..+..+.++...|++||+|+++++++++.|++++||+||+|+||.|+|++.
T Consensus       120 n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  199 (255)
T PRK06841        120 NLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELG  199 (255)
T ss_pred             hcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccc
Confidence            99999999999999999887899999999999999999999999999999999999999999999999999999999976


Q ss_pred             cccccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........ .......+.+++..|||++++.+.  ++.+....++|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~~~~~~~~~G  243 (255)
T PRK06841        200 KKAWAGEKGERAKKLIPAGRFAYPEEIAAAALF--LASDAAAMITG  243 (255)
T ss_pred             ccccchhHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCccccCccC
Confidence            54322111 112223477899999999998664  44555555554

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=277.80  Aligned_cols=228  Identities=23%  Similarity=0.301  Sum_probs=192.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-------HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-------LLQAQEEIKKACPNPKFIRFIEYEEIKKACPN  166 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  166 (475)
                      ++++||+++||||++|||.++|+.|+++|++|++++|+.+.       ++++.+++...+                    
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~--------------------   61 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG--------------------   61 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcC--------------------
Confidence            45789999999999999999999999999999999998653       444455554332                    


Q ss_pred             CCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         167 PKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       167 ~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                          .++.++.+|++ +.+++.++++++.+.++++|+||||||.....++.+.+.++++++                   
T Consensus        62 ----~~~~~~~~D~~-~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~-------------------  117 (273)
T PRK08278         62 ----GQALPLVGDVR-DEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLM-------------------  117 (273)
T ss_pred             ----CceEEEEecCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHH-------------------
Confidence                46788999999 999999999999999999999999999887777888889999988                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC--CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI--YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                        +++|+.|+++++++++|.|.+++.|+||++||..+..+.  ++...|++||+|+++|+++|+.|++++||+||+|+||
T Consensus       118 --~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg  195 (273)
T PRK08278        118 --QQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPR  195 (273)
T ss_pred             --HHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCC
Confidence              999999999999999999998878999999998887776  7889999999999999999999999999999999999


Q ss_pred             -CCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         325 -DTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       325 -~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                       .++|++.......       ..+.++...|++++++.+.++  .+....++|
T Consensus       196 ~~i~t~~~~~~~~~-------~~~~~~~~~p~~va~~~~~l~--~~~~~~~~G  239 (273)
T PRK08278        196 TTIATAAVRNLLGG-------DEAMRRSRTPEIMADAAYEIL--SRPAREFTG  239 (273)
T ss_pred             CccccHHHHhcccc-------cccccccCCHHHHHHHHHHHh--cCcccccee
Confidence             6899865443211       124567889999999876643  333444555

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=278.13  Aligned_cols=219  Identities=23%  Similarity=0.255  Sum_probs=179.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.++++++.+++...+                        .++.++.
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~------------------------~~~~~~~   55 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAG------------------------FDVSTQE   55 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CeEEEEE
Confidence            689999998 699999999996 89999999999888887777775432                        4678899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++++ ++++++|+||||||+..       ..++++.+                     +++|+.|++
T Consensus        56 ~Dv~-d~~~i~~~~~~~-~~~g~id~li~nAG~~~-------~~~~~~~~---------------------~~vN~~g~~  105 (275)
T PRK06940         56 VDVS-SRESVKALAATA-QTLGPVTGLVHTAGVSP-------SQASPEAI---------------------LKVDLYGTA  105 (275)
T ss_pred             eecC-CHHHHHHHHHHH-HhcCCCCEEEECCCcCC-------chhhHHHH---------------------HHHhhHHHH
Confidence            9999 999999999988 56899999999999752       22456666                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccC------------------------------CCChhhHHHHHHHHHHHHHH
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGI------------------------------YGLAAYTSSKFALKGFAEAL  307 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------------------------~~~~~Y~aSKaAl~~l~~sL  307 (475)
                      ++++.++|.|.++  |++|++||.++..+.                              ++...|++||+|+.+++++|
T Consensus       106 ~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l  183 (275)
T PRK06940        106 LVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAE  183 (275)
T ss_pred             HHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHH
Confidence            9999999999754  789999998876542                              24678999999999999999


Q ss_pred             HHHHccCCcEEEEEeCCCCCCCCCcccccCCc----cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         308 YMEVKQSGLTITLCLPPDTDTPGFENEEKSKP----RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       308 a~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +.|++++||+||+|+||+|+|++..+......    .......|++|+++|||||++  .+|++++...+++|
T Consensus       184 a~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~--~~fL~s~~~~~itG  254 (275)
T PRK06940        184 AVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAAL--AEFLMGPRGSFITG  254 (275)
T ss_pred             HHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHH--HHHHcCcccCcccC
Confidence            99999999999999999999998654221111    111123478999999999998  45567777777776

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.2e-33  Score=279.39  Aligned_cols=265  Identities=20%  Similarity=0.212  Sum_probs=204.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .++++||++|||||++|||+++|++|+++|++|++.+++ .+.++++.+++...+                        .
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g------------------------~   62 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG------------------------A   62 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcC------------------------C
Confidence            366889999999999999999999999999999999875 455667777776533                        5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.+++.++++.+.+ +|++|+||||||+.....+.+.+.++++.+                     +++
T Consensus        63 ~~~~~~~Dv~-d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~---------------------~~v  119 (306)
T PRK07792         63 KAVAVAGDIS-QRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAV---------------------IAV  119 (306)
T ss_pred             eEEEEeCCCC-CHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            6888999999 99999999999998 999999999999987777788889999887                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-------CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRG-------RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~-------~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                      |+.|+++++++++++|.++.       .|+||++||.++..+.++...|++||+|+++|+++++.|+.++||+||+|+||
T Consensus       120 n~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg  199 (306)
T PRK07792        120 HLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR  199 (306)
T ss_pred             hhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence            99999999999999997531       37999999999999989999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccc---c----CCCcccccccCCCCC
Q psy3252         325 DTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEE---K----SKPRETSLISQTGGL  397 (475)
Q Consensus       325 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~---~----~~~~~~~~~~~~~~~  397 (475)
                       +.|+|........+...   ........||+|+....  +++++....++|-.-.-   .    ..+............
T Consensus       200 -~~t~~~~~~~~~~~~~~---~~~~~~~~pe~va~~v~--~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~  273 (306)
T PRK07792        200 -ARTAMTADVFGDAPDVE---AGGIDPLSPEHVVPLVQ--FLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDA  273 (306)
T ss_pred             -CCCchhhhhccccchhh---hhccCCCCHHHHHHHHH--HHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCC
Confidence             58887543221111110   01123458999998644  45566555555521100   0    011111222222245


Q ss_pred             CChHHHHHHHHHH
Q psy3252         398 YRPEVVAKQLLED  410 (475)
Q Consensus       398 ~~~e~vA~~i~~a  410 (475)
                      .++|++++.+-+.
T Consensus       274 ~~~~~~~~~~~~~  286 (306)
T PRK07792        274 WDPGELSATLRDY  286 (306)
T ss_pred             CCHHHHHHHHHHH
Confidence            7889988887665

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=270.99  Aligned_cols=260  Identities=20%  Similarity=0.242  Sum_probs=200.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||++|||+++++.|+++|++|++++|+.++++++.+                              ..+.++.+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~------------------------------~~~~~~~~   51 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA------------------------------AGFTAVQL   51 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH------------------------------CCCeEEEe
Confidence            689999999999999999999999999999999876554321                              12457899


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ +.++++++++.+.+.++++|+||||||....+++.+.+.++++..                     +++|+.|++.
T Consensus        52 Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~g~~~  109 (274)
T PRK05693         52 DVN-DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQ---------------------FETNVFAVVG  109 (274)
T ss_pred             eCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHHhHHHHH
Confidence            999 999999999999999999999999999887777888888999887                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK  338 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~  338 (475)
                      ++++++|.|.+. .|+||++||..+..+.++...|++||++++.|+++++.|++++||+|++|+||+|+|++........
T Consensus       110 l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~  188 (274)
T PRK05693        110 VTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREA  188 (274)
T ss_pred             HHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccch
Confidence            999999999764 5899999999999999999999999999999999999999999999999999999999765432111


Q ss_pred             ccccccccccCCCCChH--HhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCC-
Q psy3252         339 PRETSLISQTGGLYRPE--VVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGN-  415 (475)
Q Consensus       339 ~~~~~~~~~~~~~~~pe--~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~-  415 (475)
                      ....    +....+.|.  .+..                             ..........+|+++|+.+++++.+++ 
T Consensus       189 ~~~~----~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~a~~i~~~~~~~~~  235 (274)
T PRK05693        189 EQLL----AEQSPWWPLREHIQA-----------------------------RARASQDNPTPAAEFARQLLAAVQQSPR  235 (274)
T ss_pred             hhcC----CCCCccHHHHHHHHH-----------------------------HHHhccCCCCCHHHHHHHHHHHHhCCCC
Confidence            0000    000000000  0000                             000001124689999999999999866 


Q ss_pred             -eeEEeCchhHHHHHHhcCCcchhhHHHHHHH
Q psy3252         416 -YFSTVGLESYLITTLCAGFSPIVSIQETFIQ  446 (475)
Q Consensus       416 -~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~  446 (475)
                       ..+.+|...+++.. ..+++|. .+.+++..
T Consensus       236 ~~~~~~g~~~~~~~~-~~~~~p~-~~~~~~~~  265 (274)
T PRK05693        236 PRLVRLGNGSRALPL-LARLLPR-GLLDRVLR  265 (274)
T ss_pred             CceEEecCchHHHHH-HHHHCcH-HHHHHHHH
Confidence             35667766655543 4577783 34444433

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=274.15  Aligned_cols=233  Identities=26%  Similarity=0.334  Sum_probs=193.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+.+|+++||||++|||+++|++|+++|++|++++|+.+ ..+..+++...+                        .++.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~------------------------~~~~   57 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRG------------------------HRCT   57 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhC------------------------CceE
Confidence            467899999999999999999999999999999999874 444444443322                        4577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.++++++++++.+.++++|+||||||.....++.+.+.++++..                     +++|+.
T Consensus        58 ~~~~Dl~-~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  115 (263)
T PRK08226         58 AVVADVR-DPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFH---------------------IDINIK  115 (263)
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HhhhhH
Confidence            8999999 999999999999999999999999999887777888888888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccc-cccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAA-NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~-~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      +++.+++.+++.|.+.+.++||++||..+ ..+.++...|+++|+++++++++++.|+.+.||+||+|+||.|+|++...
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~  195 (263)
T PRK08226        116 GVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES  195 (263)
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHh
Confidence            99999999999998877789999999887 45667888999999999999999999999999999999999999998654


Q ss_pred             cccC----Ccc----ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKS----KPR----ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~----~~~----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ....    ...    ......|++++..|||++++.  +|++++...+++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~--~~l~~~~~~~~~g  244 (263)
T PRK08226        196 IARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELA--AFLASDESSYLTG  244 (263)
T ss_pred             hhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHH--HHHcCchhcCCcC
Confidence            3211    110    111134778999999999954  4566665566665

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=275.79  Aligned_cols=228  Identities=25%  Similarity=0.325  Sum_probs=188.8

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ...+++||++|||||++|||.++|++|+++|++|++++|+.+..         . .                       .
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~-~-----------------------~   49 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------L-P-----------------------E   49 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------c-C-----------------------C
Confidence            34567899999999999999999999999999999999986421         0 0                       3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ++.++.+|++ |.++++++++++.+.++++|+||||||...  ..++.+.+.++++..                     +
T Consensus        50 ~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~---------------------~  107 (260)
T PRK06523         50 GVEFVAADLT-TAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDE---------------------L  107 (260)
T ss_pred             ceeEEecCCC-CHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHH---------------------H
Confidence            5778999999 999999999999999999999999999753  345677888888877                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC-CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.|++.++++++|.|.+++.|+||++||..+..+.+ +...|++||+++++|+++++.|++++||+||+|+||.|+|
T Consensus       108 ~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t  187 (260)
T PRK06523        108 NLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIET  187 (260)
T ss_pred             hHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccC
Confidence            999999999999999999988789999999999988765 7889999999999999999999999999999999999999


Q ss_pred             CCCcccccC-------Cccc--cc-----cccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKS-------KPRE--TS-----LISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~-------~~~~--~~-----~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++.......       ....  ..     ...|+++...|||++++.+.  ++++...+++|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~--l~s~~~~~~~G  247 (260)
T PRK06523        188 EAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAF--LASDRAASITG  247 (260)
T ss_pred             ccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHH--HhCcccccccC
Confidence            986432110       0000  00     12477899999999987544  44555555555

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-33  Score=270.93  Aligned_cols=239  Identities=25%  Similarity=0.302  Sum_probs=202.7

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ++..++.||+++||||++|||+++|+.|+++|++|++++|+.++++++..++....                        
T Consensus         2 ~~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~------------------------   57 (258)
T PRK06949          2 GRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG------------------------   57 (258)
T ss_pred             CcccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------
Confidence            45566889999999999999999999999999999999999998888877765433                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ +.+++.++++++.+.++++|++|||||.....++.+.+.++++.+                     ++
T Consensus        58 ~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~  115 (258)
T PRK06949         58 GAAHVVSLDVT-DYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFV---------------------FD  115 (258)
T ss_pred             CcEEEEEecCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------Hh
Confidence            45788999999 999999999999999999999999999876667777788888877                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCC--------CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         251 LNLYGTIHMTKALVEGMKQRG--------RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~--------~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      +|+.+++.+++++++.|.++.        .|+||++||..+..+.+...+|+++|++++.++++++.|+.++||+|++|+
T Consensus       116 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~  195 (258)
T PRK06949        116 TNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAIC  195 (258)
T ss_pred             hcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEe
Confidence            999999999999999998664        479999999999888888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         323 PPDTDTPGFENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       323 PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ||+|+|++......... .......+.++.+.|||+++...  +++.++..+++|-
T Consensus       196 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~--~l~~~~~~~~~G~  249 (258)
T PRK06949        196 PGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLL--LLAADESQFINGA  249 (258)
T ss_pred             eCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhChhhcCCCCc
Confidence            99999998664322111 11122346789999999998854  4566666676663

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-33  Score=273.45  Aligned_cols=236  Identities=20%  Similarity=0.255  Sum_probs=195.7

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .++++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...+                        .
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~   58 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG------------------------P   58 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC------------------------C
Confidence            3567889999999999999999999999999999999999888877766665432                        3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ +.++++++++++.+.++++|++|||||.....++.+.+.++++.+                     +++
T Consensus        59 ~~~~~~~Dv~-~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~  116 (264)
T PRK07576         59 EGLGVSADVR-DYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTV---------------------VDI  116 (264)
T ss_pred             ceEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------HHH
Confidence            5678999999 999999999999999999999999999776667778888888877                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC-CCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD-TPG  330 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~-T~~  330 (475)
                      |+.|+++++++++|.|.++ .|+||++||..+..+.++...|++||+|+++|+++++.|+.++||+|++|+||.++ |++
T Consensus       117 n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~  195 (264)
T PRK07576        117 DLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG  195 (264)
T ss_pred             HhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH
Confidence            9999999999999999765 48999999999988889999999999999999999999999999999999999997 664


Q ss_pred             CcccccCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...........  .....++++...|+|+++..+.+.  .+....++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--~~~~~~~~G  241 (264)
T PRK07576        196 MARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLA--SDMASYITG  241 (264)
T ss_pred             HhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc--ChhhcCccC
Confidence            43322111111  111236788999999998765543  444444444

>KOG1207|consensus

Probab=100.00  E-value=7.6e-35  Score=258.65  Aligned_cols=228  Identities=24%  Similarity=0.263  Sum_probs=196.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++.|+++++||+..|||+++++.|++.|++|+.++|+++.+..+..+..                           .-+
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---------------------------~~I   55 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---------------------------SLI   55 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---------------------------cce
Confidence            45789999999999999999999999999999999999999988776532                           447


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +.+..|++ +.+.+.+++    ...+++|.||||||+....++.+.+.++|++.                     |+||+
T Consensus        56 ~Pi~~Dls-~wea~~~~l----~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~---------------------F~VNv  109 (245)
T KOG1207|consen   56 IPIVGDLS-AWEALFKLL----VPVFPIDGLVNNAGVATNHPFGEITQQSFDRT---------------------FAVNV  109 (245)
T ss_pred             eeeEeccc-HHHHHHHhh----cccCchhhhhccchhhhcchHHHHhHHhhcce---------------------eeeee
Confidence            88999999 766555544    34579999999999999999999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhC-CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.++|.+...+..+ .+|.|||+||.++..+..+...||++|+|+++++++||.||++++||||+|.|-.|-|.|-+
T Consensus       110 ravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~  189 (245)
T KOG1207|consen  110 RAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR  189 (245)
T ss_pred             eeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc
Confidence            99999999987777654 46899999999999999999999999999999999999999999999999999999999887


Q ss_pred             ccccCCcccccc--ccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPRETSL--ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~~~~~--~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +..........+  ..|++|+.+.++|.++.  +|+.+.+.+-++|
T Consensus       190 dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~--lfLLSd~ssmttG  233 (245)
T KOG1207|consen  190 DNWSDPDKKKKMLDRIPLKRFAEVDEVVNAV--LFLLSDNSSMTTG  233 (245)
T ss_pred             cccCCchhccchhhhCchhhhhHHHHHHhhh--eeeeecCcCcccC
Confidence            665444333333  46899999999999874  5666776666665

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.6e-33  Score=269.71  Aligned_cols=233  Identities=23%  Similarity=0.291  Sum_probs=193.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++|+++||||++|||+++|++|+++|++|++. +++....++..+++...+                        .++.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~------------------------~~~~   56 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALG------------------------FDFI   56 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcC------------------------CcEE
Confidence            468999999999999999999999999998884 455555555555554332                        4577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      .+.+|++ |.+++.++++++.+.++++|+||||||.....++.+.+.++++.+                     +++|+.
T Consensus        57 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  114 (246)
T PRK12938         57 ASEGNVG-DWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAV---------------------IDTNLT  114 (246)
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhH
Confidence            8899999 999999999999999999999999999876667778888999888                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +++.+++++++.|.+++.|+||++||..+..+.++...|+++|+++++|+++++.|+.++||++|+|+||+++|++....
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~  194 (246)
T PRK12938        115 SLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI  194 (246)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc
Confidence            99999999999998887899999999999989899999999999999999999999999999999999999999987643


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ............+.+++..||+++++..  +++.+....++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~l~~~~~~~~~g  234 (246)
T PRK12938        195 RPDVLEKIVATIPVRRLGSPDEIGSIVA--WLASEESGFSTG  234 (246)
T ss_pred             ChHHHHHHHhcCCccCCcCHHHHHHHHH--HHcCcccCCccC
Confidence            2111111112346678999999998644  455555455554

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=266.46  Aligned_cols=187  Identities=27%  Similarity=0.380  Sum_probs=171.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++...+.  +                        .++.++.+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~------------------------~~~~~~~~   55 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--A------------------------GNAWTGAL   55 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--C------------------------CceEEEEe
Confidence            689999999999999999999999999999999988777665543  1                        46789999


Q ss_pred             ecCCCHHHHHHHHHHHHHh-cCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDR-CGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~-~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      |++ +.+++.++++.+.+. ++++|+||||||......+.+.+.++++.+                     +++|+.+++
T Consensus        56 D~~-~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  113 (260)
T PRK08267         56 DVT-DRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRV---------------------IDINVKGVL  113 (260)
T ss_pred             cCC-CHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------HHHHhHHHH
Confidence            999 999999999998777 789999999999987777888888888887                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++++.+.|.+++.++||++||..+..+.++...|++||+++++|+++|+.|+.++||+|++|+||.++|+++..
T Consensus       114 ~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        114 NGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             HHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence            9999999999988889999999999999999999999999999999999999999999999999999999997653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.9e-33  Score=256.45  Aligned_cols=186  Identities=26%  Similarity=0.341  Sum_probs=168.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.+.|.++|||||++|||+++|++|.+.|-+|++++|++++++++.++.                            ..+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----------------------------p~~   52 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----------------------------PEI   52 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----------------------------cch
Confidence            3567899999999999999999999999999999999999999887654                            346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcc--cCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE--EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +...|||. |.+++++++++++++|+.+|+||||||+...-.+.  +...++.+.-                     +++
T Consensus        53 ~t~v~Dv~-d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~e---------------------I~~  110 (245)
T COG3967          53 HTEVCDVA-DRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE---------------------IAT  110 (245)
T ss_pred             heeeeccc-chhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHH---------------------HHH
Confidence            67899999 99999999999999999999999999998765444  1223333333                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      |+.+|+++++.++|++.++..+.||+|||..++.|....+.||++|+|++.|+.+|+..++..+|.|.-+.|..|+|+
T Consensus       111 Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         111 NLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999997

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=8.4e-33  Score=269.81  Aligned_cols=232  Identities=19%  Similarity=0.197  Sum_probs=189.6

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +..+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++   .                        .
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~------------------------~   56 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---G------------------------E   56 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---C------------------------C
Confidence            345678999999999999999999999999999999999887665544332   1                        3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC--CCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ++.++.+|++ +.+++.++++++.+++|++|+||||||+...  .++.+.+.++++..                     +
T Consensus        57 ~~~~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~---------------------~  114 (255)
T PRK05717         57 NAWFIAMDVA-DEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRV---------------------L  114 (255)
T ss_pred             ceEEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHH---------------------H
Confidence            5778999999 9999999999999999999999999998743  45667788888877                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.+++.++++++|.|.+. .|+||++||..+..+.++...|++||+|+++|+++++.|+... |+||+|+||+++|+
T Consensus       115 ~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~-i~v~~i~Pg~i~t~  192 (255)
T PRK05717        115 AVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-IRVNAVSPGWIDAR  192 (255)
T ss_pred             HHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcCC-CEEEEEecccCcCC
Confidence            999999999999999999765 4899999999999999999999999999999999999999874 99999999999999


Q ss_pred             CCcccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +........ ........+.+|.+.|+|++.+..  +++......++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~--~l~~~~~~~~~g  238 (255)
T PRK05717        193 DPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVA--WLLSRQAGFVTG  238 (255)
T ss_pred             ccccccchHHHHHHhhcCCCCCCcCHHHHHHHHH--HHcCchhcCccC
Confidence            744321100 011112346789999999999854  344444444443

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=6.5e-33  Score=267.36  Aligned_cols=214  Identities=14%  Similarity=0.104  Sum_probs=178.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||++|||+++|++|+++|++|++++|+.+...   +++...                          .+.++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~--------------------------~~~~~~   52 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA--------------------------GAQCIQ   52 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc--------------------------CCEEEE
Confidence            579999999999999999999999999999999875432   223221                          245789


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.++++++++++.+.++++|++|||||........+.+.++++++                     +++|+.+++
T Consensus        53 ~D~~-~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~vn~~~~~  110 (236)
T PRK06483         53 ADFS-TNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARM---------------------MQIHVNAPY  110 (236)
T ss_pred             cCCC-CHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHH---------------------HHHcchHHH
Confidence            9999 999999999999999999999999999865555567788899988                     999999999


Q ss_pred             HHHHHHHHHHHhCC--CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         258 HMTKALVEGMKQRG--RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       258 ~l~~~~lp~m~~~~--~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      .+++.++|.|.+++  .|+||++||..+..+.++...|++||+|+++|+++++.|+++ +||||+|+||+|.|+..... 
T Consensus       111 ~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~~-  188 (236)
T PRK06483        111 LLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGDDA-  188 (236)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCCCH-
Confidence            99999999998765  689999999999888889999999999999999999999988 49999999999988642111 


Q ss_pred             cCCccccccccccCCCCChHHhhhccceee
Q psy3252         336 KSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                       ..........+++|...|||++++...++
T Consensus       189 -~~~~~~~~~~~~~~~~~~~~va~~~~~l~  217 (236)
T PRK06483        189 -AYRQKALAKSLLKIEPGEEEIIDLVDYLL  217 (236)
T ss_pred             -HHHHHHhccCccccCCCHHHHHHHHHHHh
Confidence             01111122347789999999999876654

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-32  Score=263.35  Aligned_cols=227  Identities=20%  Similarity=0.252  Sum_probs=187.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++++||||++|||+++|++|+++|++|++++|+.++++++.+.    .                        .++.++.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~------------------------~~~~~~~~   53 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----S------------------------ANIFTLAF   53 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----c------------------------CCCeEEEe
Confidence            6899999999999999999999999999999998776654331    1                        34678899


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ +.++++++++++..   .+|++|||||.....+..+.+.++++++                     +++|+.|+++
T Consensus        54 D~~-~~~~~~~~~~~~~~---~~d~~i~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~  108 (240)
T PRK06101         54 DVT-DHPGTKAALSQLPF---IPELWIFNAGDCEYMDDGKVDATLMARV---------------------FNVNVLGVAN  108 (240)
T ss_pred             eCC-CHHHHHHHHHhccc---CCCEEEEcCcccccCCCCCCCHHHHHHH---------------------HHHHHHHHHH
Confidence            999 99999999887642   4799999999764444445678888877                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK  338 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~  338 (475)
                      +++.++|.|.+  .++||++||..+..+.++...|++||+++++|+++|+.|+.++||+|++|+||.|+|++......  
T Consensus       109 l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~--  184 (240)
T PRK06101        109 CIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF--  184 (240)
T ss_pred             HHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC--
Confidence            99999999964  37899999999999999999999999999999999999999999999999999999996442100  


Q ss_pred             ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCeeE
Q psy3252         339 PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYFS  418 (475)
Q Consensus       339 ~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~~~  418 (475)
                                                                  .          .+..++|+++|+.+++++++++..+
T Consensus       185 --------------------------------------------~----------~~~~~~~~~~a~~i~~~i~~~~~~~  210 (240)
T PRK06101        185 --------------------------------------------A----------MPMIITVEQASQEIRAQLARGKSHI  210 (240)
T ss_pred             --------------------------------------------C----------CCcccCHHHHHHHHHHHHhcCCCEE
Confidence                                                        0          0114689999999999999999888


Q ss_pred             EeCchhHHHHHHhcCCcch
Q psy3252         419 TVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       419 ~~~~~~~~~~~~~~~~~P~  437 (475)
                      +++....++... .+++|.
T Consensus       211 ~~~~~~~~~~~~-~~~~p~  228 (240)
T PRK06101        211 YFPARFTWLIRL-LGLLPY  228 (240)
T ss_pred             EcChhHHHHHHH-HHhCcH
Confidence            777555454443 366774

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-33  Score=269.23  Aligned_cols=233  Identities=25%  Similarity=0.301  Sum_probs=194.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++...+                        .++.
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   57 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG------------------------RRAL   57 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC------------------------CceE
Confidence            3578999999999999999999999999999999999988888777765432                        4578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++++.+++++.++++++|++|||||.... .++.+.+.++++.+                     +++|+
T Consensus        58 ~~~~D~~-~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~  115 (258)
T PRK07890         58 AVPTDIT-DEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAV---------------------IELNV  115 (258)
T ss_pred             EEecCCC-CHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHH---------------------HHhhh
Confidence            8999999 9999999999999999999999999998643 56777888999888                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|++.+++++++.|.+.+ |+||++||..+..+.++...|+++|++++.++++++.|++++||+||+|+||+|.|++...
T Consensus       116 ~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~  194 (258)
T PRK07890        116 LGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG  194 (258)
T ss_pred             HHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH
Confidence            999999999999997654 7999999999998999999999999999999999999999999999999999999997543


Q ss_pred             cccCC--------cc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSK--------PR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~--------~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....        +.   ......+.+++..|||++++.+  +++.+...+++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~--~l~~~~~~~~~G  246 (258)
T PRK07890        195 YFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVL--FLASDLARAITG  246 (258)
T ss_pred             HhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHH--HHcCHhhhCccC
Confidence            21100        00   1112346788999999998864  444443344444

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=267.36  Aligned_cols=193  Identities=31%  Similarity=0.462  Sum_probs=174.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++|++|||||+||||.++++.|+++|++|++++|+.+.++++.+++......                      .++++
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------------------~~~~~   58 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQ----------------------QNIKV   58 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC----------------------CceeE
Confidence            35789999999999999999999999999999999998888776666543211                      46888


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++++ ++++.+.++++|++|||||......+.+.+.++++..                     +++|+.+
T Consensus        59 ~~~D~~-d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~  115 (280)
T PRK06914         59 QQLDVT-DQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQ---------------------FETNVFG  115 (280)
T ss_pred             EecCCC-CHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHH---------------------HHHhhHH
Confidence            999999 9999999 9999999999999999999887777778888888877                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      ++.+++.++|.|++.+.++||++||..+..+.++...|++||+++++|+++++.|+.++||+|++|+||.++|+++..
T Consensus       116 ~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (280)
T PRK06914        116 AISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEV  193 (280)
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhc
Confidence            999999999999888789999999999999999999999999999999999999999999999999999999997653

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-32  Score=299.76  Aligned_cols=239  Identities=24%  Similarity=0.336  Sum_probs=201.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++...+                        .++.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~  423 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG------------------------GTAH  423 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            5779999999999999999999999999999999999999888888776543                        4688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCC--HHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT--MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      ++.+|++ |.++++++++++.+.+|++|+||||||+.....+.+..  .++++.+                     +++|
T Consensus       424 ~~~~Dv~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~---------------------~~~N  481 (657)
T PRK07201        424 AYTCDLT-DSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERT---------------------MAVN  481 (657)
T ss_pred             EEEecCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHH---------------------HHHH
Confidence            8999999 99999999999999999999999999986544443322  4667766                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|++++++.++|.|.+++.|+||++||.++..+.++.+.|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus       482 ~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~  561 (657)
T PRK07201        482 YFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA  561 (657)
T ss_pred             HHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC
Confidence            99999999999999998888999999999999899999999999999999999999999999999999999999999754


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~  412 (475)
                      ....                                        +               .....++||++|+.+++++.
T Consensus       562 ~~~~----------------------------------------~---------------~~~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        562 PTKR----------------------------------------Y---------------NNVPTISPEEAADMVVRAIV  586 (657)
T ss_pred             cccc----------------------------------------c---------------cCCCCCCHHHHHHHHHHHHH
Confidence            2100                                        0               00125799999999999998


Q ss_pred             cCCeeEEeCchhHHHHHHhcCCcc
Q psy3252         413 KGNYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       413 ~g~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      +++..+.++.  ..+..+..+++|
T Consensus       587 ~~~~~~~~~~--~~~~~~~~~~~p  608 (657)
T PRK07201        587 EKPKRIDTPL--GTFAEVGHALAP  608 (657)
T ss_pred             hCCcEEeccH--HHHHHHHHHHCH
Confidence            7766555542  333445557778

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-32  Score=266.49  Aligned_cols=224  Identities=21%  Similarity=0.250  Sum_probs=192.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEE-EecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +.+|+++||||++|||+++|++|+++|++|++ .+|+.++++++.++++..+                        .++.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   57 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG------------------------RKAL   57 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------CeEE
Confidence            45789999999999999999999999999876 5888888888777776543                        5678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+++.++++++.+.++++|+||||||.....++.+.+.++++..                     +++|+.
T Consensus        58 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  115 (250)
T PRK08063         58 AVKANVG-DVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWT---------------------MNINAK  115 (250)
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhhH
Confidence            8999999 999999999999999999999999999887778888888888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +++.+++++++.|.+++.|+||++||..+..+.++...|++||+++++|+++++.|+.+.||+||+|+||+++|++....
T Consensus       116 ~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~  195 (250)
T PRK08063        116 ALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF  195 (250)
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc
Confidence            99999999999999888899999999988888888999999999999999999999999999999999999999986543


Q ss_pred             ccCCccc--cccccccCCCCChHHhhhccceee
Q psy3252         335 EKSKPRE--TSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       335 ~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .......  .....+.++...|+|++++.+.++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  228 (250)
T PRK08063        196 PNREELLEDARAKTPAGRMVEPEDVANAVLFLC  228 (250)
T ss_pred             cCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence            2211111  111235677899999999876544

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=267.56  Aligned_cols=233  Identities=18%  Similarity=0.231  Sum_probs=194.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||++|||.++|++|+++|++|++++|+.+.++++.+++....+.                      .+++++.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~----------------------~~~~~~~   59 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGE----------------------GMAYGFG   59 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCC----------------------ceeEEEE
Confidence            689999999999999999999999999999999988888777776554311                      3578999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.+++.++++++.+.++++|++|||||.....++.+.+.++++..                     +++|+.|++
T Consensus        60 ~D~~-~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  117 (259)
T PRK12384         60 ADAT-SEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRS---------------------LQVNLVGYF  117 (259)
T ss_pred             ccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHhccHHHH
Confidence            9999 999999999999999999999999999887777888899999888                     999999999


Q ss_pred             HHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC-CCCCCcccc
Q psy3252         258 HMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT-DTPGFENEE  335 (475)
Q Consensus       258 ~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v-~T~~~~~~~  335 (475)
                      ++++++++.|.+++ .|+||++||..+..+.+....|++||+|+++++++++.|++++||+||+|+||.+ .|+++....
T Consensus       118 ~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~  197 (259)
T PRK12384        118 LCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLL  197 (259)
T ss_pred             HHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhh
Confidence            99999999998876 6899999999888888888999999999999999999999999999999999975 666654321


Q ss_pred             cC--------Cccc---cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         336 KS--------KPRE---TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       336 ~~--------~~~~---~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +.        .+..   .....++++...|+|++++.+.+  ++.....++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l--~~~~~~~~~G  247 (259)
T PRK12384        198 PQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFY--ASPKASYCTG  247 (259)
T ss_pred             HHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHH--cCcccccccC
Confidence            11        0110   11134778999999999987544  4443333333

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-32  Score=266.90  Aligned_cols=234  Identities=23%  Similarity=0.289  Sum_probs=196.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.++++++.+.+...+                        .++
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~------------------------~~~   61 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAG------------------------RRA   61 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcE
Confidence            35789999999999999999999999999999999999888888777765432                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++++.+.++++|+||||||......+.+.+.++++.+                     +++|+
T Consensus        62 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  119 (263)
T PRK07814         62 HVVAADLA-HPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADA---------------------FTFNV  119 (263)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHhhc
Confidence            88999999 999999999999999999999999999876677778888888887                     99999


Q ss_pred             HHHHHHHHHHHHHHHh-CCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQ-RGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~-~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.+++++.+.|.+ ++.|+||++||..+..+.++...|++||+++++++++++.|+.+ +|+||+|+||.+.|++..
T Consensus       120 ~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~  198 (263)
T PRK07814        120 ATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALE  198 (263)
T ss_pred             HHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhh
Confidence            9999999999999987 46789999999999999999999999999999999999999987 699999999999999765


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........  ......+.++...|||++++.+.+  +.+....+.|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~~~~~~~~g  242 (263)
T PRK07814        199 VVAANDELRAPMEKATPLRRLGDPEDIAAAAVYL--ASPAGSYLTG  242 (263)
T ss_pred             hccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCccccCcCC
Confidence            32211111  111123667889999999887664  3443334333

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-31  Score=258.81  Aligned_cols=229  Identities=26%  Similarity=0.383  Sum_probs=198.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++++++||||++|||+++|++|+++|++|++++|+.+++++..+++...+                        .++.
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~------------------------~~~~   59 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG------------------------VKVV   59 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC------------------------CeEE
Confidence            4568999999999999999999999999999999999888887777765432                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.+++.++++++.++++++|++|||||......+.+.+.++++..                     +++|+.
T Consensus        60 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  117 (239)
T PRK07666         60 IATADVS-DYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKI---------------------IQVNLM  117 (239)
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHH---------------------HHHHhH
Confidence            8999999 999999999999999999999999999876667778888888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +++++++++++.|.+++.++||++||..+..+.++...|++||+++..++++++.|+.++||++++|+||.+.|++....
T Consensus       118 ~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~  197 (239)
T PRK07666        118 GVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL  197 (239)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc
Confidence            99999999999999888899999999999999999999999999999999999999999999999999999999964422


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g  414 (475)
                      ....                                            .         .....++++++|+.+++.+..+
T Consensus       198 ~~~~--------------------------------------------~---------~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        198 GLTD--------------------------------------------G---------NPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             cccc--------------------------------------------c---------CCCCCCCHHHHHHHHHHHHhCC
Confidence            1000                                            0         0112578999999999999988


Q ss_pred             CeeEEeCc
Q psy3252         415 NYFSTVGL  422 (475)
Q Consensus       415 ~~~~~~~~  422 (475)
                      +..++..+
T Consensus       225 ~~~~~~~~  232 (239)
T PRK07666        225 KRTFIKSA  232 (239)
T ss_pred             CceEEEEE
Confidence            76665543

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=3e-32  Score=263.18  Aligned_cols=223  Identities=22%  Similarity=0.254  Sum_probs=190.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      |+++++|+++||||++|||++++++|+++|+.|++.+|+.++++++...+   .                        .+
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~------------------------~~   53 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---G------------------------ER   53 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C------------------------Cc
Confidence            34678999999999999999999999999999999999988776654432   1                        35


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ +.++++++++++.+.++++|++|||||.....++.+.+.++++.+                     +++|
T Consensus        54 ~~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n  111 (245)
T PRK12936         54 VKIFPANLS-DRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSV---------------------LEVN  111 (245)
T ss_pred             eEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------Hhhc
Confidence            778899999 999999999999999999999999999877667777888888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.+++++++++.+.|.+++.++||++||..+..+.++...|+++|+|+.++++.++.++.+.||++++|+||+++|++..
T Consensus       112 ~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~  191 (245)
T PRK12936        112 LTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG  191 (245)
T ss_pred             cHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc
Confidence            99999999999999887777999999999999999999999999999999999999999999999999999999999765


Q ss_pred             ccccCCccccccccccCCCCChHHhhhcccee
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      ..............+.++...|++++++...+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l  223 (245)
T PRK12936        192 KLNDKQKEAIMGAIPMKRMGTGAEVASAVAYL  223 (245)
T ss_pred             ccChHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            43221111111234678899999999987544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-32  Score=264.98  Aligned_cols=231  Identities=20%  Similarity=0.277  Sum_probs=185.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++|++|||||++|||+++|+.|+++|++|+++.+ +.+.++.+..++    +                       .++
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~-----------------------~~~   54 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----G-----------------------DRA   54 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----C-----------------------Cce
Confidence            467899999999999999999999999999988765 454444433322    1                       357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCC-ccEEEEcccccc------CCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGP-VYMLVNCAGMAL------CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~-IDvLVnnAG~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                      .++.+|++ +.++++++++++.+.+++ +|++|||||+..      ..++.+.+.++++.+                   
T Consensus        55 ~~~~~D~~-~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~-------------------  114 (253)
T PRK08642         55 IALQADVT-DREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQ-------------------  114 (253)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHH-------------------
Confidence            78999999 999999999999999987 999999999742      234667788888877                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                        +++|+.++++++++++|.|.+++.|+||++||..+..+..+...|++||+|+++|+++++.|++++||+||+|+||++
T Consensus       115 --~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v  192 (253)
T PRK08642        115 --LEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLL  192 (253)
T ss_pred             --HhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeccc
Confidence              999999999999999999988777999999998877777778899999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         327 DTPGFENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       327 ~T~~~~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|+.......... .......+++++..|+|++++...  ++.+....++|
T Consensus       193 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~~~~~~~~~G  241 (253)
T PRK08642        193 RTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLF--FASPWARAVTG  241 (253)
T ss_pred             CCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHH--HcCchhcCccC
Confidence            9986543211110 011123477899999999988654  44444555555

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=265.43  Aligned_cols=187  Identities=32%  Similarity=0.445  Sum_probs=170.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+|++|||||+||||++++++|+++|++|++++|+.++++.+.+.    .+                       .++.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~~-----------------------~~~~~~   55 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----HP-----------------------DRALAR   55 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----cC-----------------------CCeeEE
Confidence            468999999999999999999999999999999998776554331    11                       357788


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++.+.+.++++|+||||||....+++.+.+.++++.+                     +++|+.|+
T Consensus        56 ~~D~~-d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~g~  113 (277)
T PRK06180         56 LLDVT-DFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQ---------------------FEVNVFGA  113 (277)
T ss_pred             EccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHH---------------------HHHHhHHH
Confidence            99999 999999999999999999999999999987778888899999888                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      ++++++++|.|++++.|+||++||.++..+.++...|++||+++++++++++.|+.++||+|++|+||.|+|++..
T Consensus       114 ~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        114 VAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             HHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence            9999999999998888999999999999999999999999999999999999999999999999999999999654

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2.7e-32  Score=263.19  Aligned_cols=227  Identities=21%  Similarity=0.256  Sum_probs=191.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++||||++|||+++|+.|+++|++|++++|+ .+.++++.+++.+.+                        .++.++.+|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~------------------------~~~~~~~~D   56 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQG------------------------GNARLLQFD   56 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC------------------------CeEEEEEcc
Confidence            5899999999999999999999999998864 556666666665543                        468899999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ +.+++.++++++.+.++++|++|||||+....++.+.+.++++.+                     +++|+.+++++
T Consensus        57 l~-~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~l  114 (239)
T TIGR01831        57 VA-DRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIV---------------------IHTNLDGFYNV  114 (239)
T ss_pred             CC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHH---------------------HHHHhHHHHHH
Confidence            99 999999999999999999999999999877667777888888877                     99999999999


Q ss_pred             HHHHH-HHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCC
Q psy3252         260 TKALV-EGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK  338 (475)
Q Consensus       260 ~~~~l-p~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~  338 (475)
                      ++.++ |.+.+++.|+||++||.++..+.++...|+++|+++.+++++++.|+.++||+||+|+||+++|++..+..+..
T Consensus       115 ~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~  194 (239)
T TIGR01831       115 IHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDL  194 (239)
T ss_pred             HHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHH
Confidence            99875 55555667899999999999999999999999999999999999999999999999999999999876543221


Q ss_pred             ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         339 PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       339 ~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      . ......|++|..+|||++++.+.  ++.+...+++|
T Consensus       195 ~-~~~~~~~~~~~~~~~~va~~~~~--l~~~~~~~~~g  229 (239)
T TIGR01831       195 D-EALKTVPMNRMGQPAEVASLAGF--LMSDGASYVTR  229 (239)
T ss_pred             H-HHHhcCCCCCCCCHHHHHHHHHH--HcCchhcCccC
Confidence            1 11223578899999999998654  55565666665

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-32  Score=266.47  Aligned_cols=222  Identities=23%  Similarity=0.306  Sum_probs=185.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.. ++.+++.+.+                        .++
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~------------------------~~~   57 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQ------------------------PRA   57 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcC------------------------Cce
Confidence            578899999999999999999999999999999999998776 5556665433                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++..+++++.+.++++|++|||||......+.+.+ ++++..                     +++|+
T Consensus        58 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~---------------------~~~n~  114 (258)
T PRK08628         58 EFVQVDLT-DDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGR-EAFVAS---------------------LERNL  114 (258)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCH-HHHHHH---------------------Hhhhh
Confidence            89999999 99999999999999999999999999976544444444 778877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++.+++.++|.|.+. .|+||++||..+..+.++...|++||+++++++++++.|+.++||+||+|+||.|+|+++..
T Consensus       115 ~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~  193 (258)
T PRK08628        115 IHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN  193 (258)
T ss_pred             HHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH
Confidence            99999999999998764 48999999999999888999999999999999999999999999999999999999997653


Q ss_pred             cccCCccc----cc--ccccc-CCCCChHHhhhcccee
Q psy3252         334 EEKSKPRE----TS--LISQT-GGLYRPEVVKQSGLTI  364 (475)
Q Consensus       334 ~~~~~~~~----~~--~~~~~-~~~~~pe~va~~~~~~  364 (475)
                      ........    ..  ...+. .++..|+|++++.+.+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  231 (258)
T PRK08628        194 WIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFL  231 (258)
T ss_pred             HhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHH
Confidence            22111100    00  11234 3789999999986653

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-32  Score=293.07  Aligned_cols=219  Identities=23%  Similarity=0.319  Sum_probs=188.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .++.+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~~~   55 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG---------------------------PDHHA   55 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------------------------CceeE
Confidence            468999999999999999999999999999999999888877665541                           34678


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +.+|++ +.++++++++++.++++++|+||||||+..  ..++.+.+.++++.+                     +++|+
T Consensus        56 ~~~D~~-~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~---------------------~~~n~  113 (520)
T PRK06484         56 LAMDVS-DEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARL---------------------QAINL  113 (520)
T ss_pred             EEeccC-CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHH---------------------HHHhh
Confidence            999999 999999999999999999999999999843  246678889999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCC-eEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRG-CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g-~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.++++++|.|.+++.| +||++||..+..+.++...|+++|+|+.+|+++|+.|+.++||+|++|+||.|+|++..
T Consensus       114 ~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~  193 (520)
T PRK06484        114 TGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVA  193 (520)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhh
Confidence            99999999999999877665 99999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCCc---cccccccccCCCCChHHhhhccce
Q psy3252         333 NEEKSKP---RETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       333 ~~~~~~~---~~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      .......   .......+.+++..||+++++...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~  227 (520)
T PRK06484        194 ELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFF  227 (520)
T ss_pred             hhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            4322111   111123466788999999987654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-32  Score=264.30  Aligned_cols=236  Identities=25%  Similarity=0.295  Sum_probs=196.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||.++|++|+++|++|++++|+.++++.+.+++...+                        .+
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~------------------------~~   62 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG------------------------ID   62 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC------------------------Ce
Confidence            356789999999999999999999999999999999999988887777665432                        46


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+.++++|++|||||.....+..+.+.+.++.+                     +++|
T Consensus        63 ~~~~~~Dl~-d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n  120 (259)
T PRK08213         63 ALWIAADVA-DEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKV---------------------MNLN  120 (259)
T ss_pred             EEEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HhHH
Confidence            778999999 999999999999999999999999999876666777888888877                     9999


Q ss_pred             HHHHHHHHHHHHHH-HHhCCCCeEEEeccccccccCCC----ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         253 LYGTIHMTKALVEG-MKQRGRGCIVITASQAANLGIYG----LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       253 ~~g~~~l~~~~lp~-m~~~~~g~IV~iSS~a~~~~~~~----~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +.+++++++++.+. |.+++.++||++||..+..+.+.    ...|+++|+++++++++++.++.++||++|+|+||.++
T Consensus       121 ~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~  200 (259)
T PRK08213        121 VRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFP  200 (259)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCC
Confidence            99999999999998 77766789999999887766554    48999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         328 TPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       328 T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |++.....+..........+.++.+.||++++..  .+++.+....+.|
T Consensus       201 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~--~~l~~~~~~~~~G  247 (259)
T PRK08213        201 TKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAA--LLLASDASKHITG  247 (259)
T ss_pred             CcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCccccCccC
Confidence            9976543322111122234667889999998763  4555555555544

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=258.21  Aligned_cols=190  Identities=32%  Similarity=0.421  Sum_probs=173.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.+++.+++.+.+                        .++.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~   60 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTG------------------------VKAAAY   60 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCC------------------------CcEEEE
Confidence            46899999999999999999999999999999999988877777665432                        457889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.+++.++++.+.++++++|+||||||.....++.+.+.++++.+                     +++|+.++
T Consensus        61 ~~D~~-~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  118 (241)
T PRK07454         61 SIDLS-NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWV---------------------IQLNLTSV  118 (241)
T ss_pred             EccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHH---------------------HHhccHHH
Confidence            99999 999999999999999999999999999877677778888888877                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +++++.+++.|.+++.++||++||..+..+.++...|++||++++.++++++.|+.+.||++++|.||++.|++..
T Consensus       119 ~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~  194 (241)
T PRK07454        119 FQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD  194 (241)
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence            9999999999998878999999999998888889999999999999999999999999999999999999999643

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.2e-32  Score=262.45  Aligned_cols=225  Identities=22%  Similarity=0.316  Sum_probs=190.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++|+++||||++|||.++|++|+++|++|+++.+ +.+..++..+++.+.+                        .++
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~------------------------~~~   58 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEG------------------------HDV   58 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcC------------------------CeE
Confidence            467899999999999999999999999999987654 5566666666665432                        468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++++.+.++++|+||||||......+.+.+.++++.+                     +++|+
T Consensus        59 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  116 (247)
T PRK12935         59 YAVQADVS-KVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERV---------------------IDVNL  116 (247)
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHh
Confidence            89999999 999999999999999999999999999877666777788888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++.++++++|.|.+++.++||++||..+..+.++...|++||+|+++|+++++.|+.+.||+++.|+||+|+|++...
T Consensus       117 ~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (247)
T PRK12935        117 SSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE  196 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh
Confidence            99999999999999887778999999999988888999999999999999999999999999999999999999997654


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceee
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .............+.++...|||++++.+.++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~  228 (247)
T PRK12935        197 VPEEVRQKIVAKIPKKRFGQADEIAKGVVYLC  228 (247)
T ss_pred             ccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHc
Confidence            32211111112234567899999999976644

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-32  Score=262.46  Aligned_cols=229  Identities=23%  Similarity=0.286  Sum_probs=190.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+.++++.+++   +                        .++.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~------------------------~~~~   55 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---G------------------------ESAL   55 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---C------------------------CceE
Confidence            467899999999999999999999999999999999987766555443   1                        4577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++++|++ +.+++..+++.+.+.++++|++|||||.....++.+.+.++++..                     +++|+.
T Consensus        56 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  113 (249)
T PRK06500         56 VIRADAG-DVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRS---------------------FNTNVK  113 (249)
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhH
Confidence            8999999 999999999999999999999999999876667778888888887                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      ++++++++++|.|.+  .+++|+++|..+..+.++...|+++|+++++|+++++.|+.++||+|++|+||+++|++....
T Consensus       114 ~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~  191 (249)
T PRK06500        114 GPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKL  191 (249)
T ss_pred             HHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhh
Confidence            999999999999864  378999999999889999999999999999999999999999999999999999999976532


Q ss_pred             ccCCc---c---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKP---R---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~---~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....   .   ......++++...|+|++++...+  +.....+++|
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~~~~~~~~g  237 (249)
T PRK06500        192 GLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYL--ASDESAFIVG  237 (249)
T ss_pred             ccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCccccCccC
Confidence            11111   0   011123677889999999987664  3333344444

>KOG1610|consensus

Probab=100.00  E-value=1.3e-32  Score=267.30  Aligned_cols=280  Identities=22%  Similarity=0.280  Sum_probs=212.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++.+|.|+|||+-+|+|+.+|++|.++|++|++..-+++..+.+..+..+                          .+.
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s--------------------------~rl   78 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKS--------------------------PRL   78 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcC--------------------------Ccc
Confidence            456789999999999999999999999999999988888877776655431                          567


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcC--CccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCG--PVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g--~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ..+++||+ ++++|+++.+.+.+..+  .+-.||||||+.. .++.+-.+.++++++                     ++
T Consensus        79 ~t~~LDVT-~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~---------------------l~  136 (322)
T KOG1610|consen   79 RTLQLDVT-KPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKV---------------------LN  136 (322)
T ss_pred             eeEeeccC-CHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHH---------------------Hh
Confidence            88899999 99999999999988653  5999999999774 477777889999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ||++|++.+++.++|++++. +|||||+||+.|..+.|..++||+||+|++.|+.+|++|+.++||.|.+|.||..+|++
T Consensus       137 vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l  215 (322)
T KOG1610|consen  137 VNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNL  215 (322)
T ss_pred             hhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcccccc
Confidence            99999999999999998875 59999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHH
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLED  410 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~a  410 (475)
                      .....- ..........     -|.++.+..-.            .|.......-. ...   .....+-..|.+.+..|
T Consensus       216 ~~~~~~-~~~~~~~w~~-----l~~e~k~~YGe------------dy~~~~~~~~~-~~~---~~~~~dls~v~~~~~hA  273 (322)
T KOG1610|consen  216 ANPEKL-EKRMKEIWER-----LPQETKDEYGE------------DYFEDYKKSLE-KYL---SVASADLSPVVDCYEHA  273 (322)
T ss_pred             CChHHH-HHHHHHHHhc-----CCHHHHHHHHH------------HHHHHHHHHHH-hhh---hhhccccchHHHHHHHH
Confidence            762111 1111111111     12222221100            11100000000 000   01134567788888888


Q ss_pred             Hhc--CCeeEEeCchhHHHHHHhcCCcchhhHHHHHHH
Q psy3252         411 ALK--GNYFSTVGLESYLITTLCAGFSPIVSIQETFIQ  446 (475)
Q Consensus       411 i~~--g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~  446 (475)
                      +..  ++.+|+.|++.+++...+ ..+| .+++++|+.
T Consensus       274 lts~~Pr~RY~~g~da~l~~~p~-s~lP-t~l~D~i~~  309 (322)
T KOG1610|consen  274 LTSKHPRTRYSPGWDAKLLYIPL-SYLP-TALQDWILS  309 (322)
T ss_pred             HHhcCcchhcCcccchHHHHhhH-HhCC-HHHHHHHHh
Confidence            885  678889998888777655 6667 466666554

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=262.91  Aligned_cols=187  Identities=29%  Similarity=0.418  Sum_probs=172.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+    .                       ..+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~-----------------------~~~~~~   54 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----G-----------------------DRLLPL   54 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----c-----------------------CCeeEE
Confidence            4789999999999999999999999999999999988776654432    1                       357788


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++.+.+.++++|++|||||+...+++.+.+.++++++                     +++|+.++
T Consensus        55 ~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  112 (275)
T PRK08263         55 ALDVT-DRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQ---------------------IDTNFFGA  112 (275)
T ss_pred             EccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHH---------------------HHHhhHHH
Confidence            99999 999999999999999999999999999988788888999999988                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.+++.++|.|++++.++||++||..+..+.++...|++||+++++++++++.|++++||+|++|+||.++|++..
T Consensus       113 ~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        113 LWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence            9999999999998888999999999999999999999999999999999999999999999999999999999764

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-32  Score=261.25  Aligned_cols=225  Identities=24%  Similarity=0.251  Sum_probs=196.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|+++||||++|||.++|+.|+++|++|++++|+.+++++..+++...+                        .++.
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   59 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG------------------------GRAH   59 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            4678999999999999999999999999999999999988888877775433                        4588


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.++++++++++.+.++++|++|||||.....++.+.+.++++..                     +++|+.
T Consensus        60 ~~~~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  117 (250)
T PRK12939         60 AIAADLA-DPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAV---------------------MNVNVR  117 (250)
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhH
Confidence            8999999 999999999999999999999999999887777778888888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +++++++.+++.|.+++.|+||++||..+..+.++...|+++|++++++++.++.++.+.||+|++|+||.++|++....
T Consensus       118 ~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~  197 (250)
T PRK12939        118 GTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYV  197 (250)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcccccc
Confidence            99999999999999877899999999999989888999999999999999999999999999999999999999987653


Q ss_pred             cc-CCccccccccccCCCCChHHhhhccceee
Q psy3252         335 EK-SKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       335 ~~-~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .. ..........+.+++..|+|++++.+.++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  229 (250)
T PRK12939        198 PADERHAYYLKGRALERLQVPDDVAGAVLFLL  229 (250)
T ss_pred             CChHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            32 11111222346778899999999877654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.1e-32  Score=263.04  Aligned_cols=231  Identities=22%  Similarity=0.219  Sum_probs=188.9

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCh-----------hHHHHHHHHHHHhCCCCcchhhhhHHHhh
Q psy3252          95 APTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDE-----------KKLLQAQEEIKKACPNPKFIRFIEYEEIK  161 (475)
Q Consensus        95 ~l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~-----------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (475)
                      ++++|++|||||++  |||.++|++|+++|++|++++|+.           .....+.+++...+               
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------   66 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG---------------   66 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcC---------------
Confidence            56789999999994  999999999999999999999872           22222333333221               


Q ss_pred             hcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhh
Q psy3252         162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLA  241 (475)
Q Consensus       162 ~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (475)
                               .+++++.+|++ +.+++..+++++.+.++++|+||||||+....++.+.+.++++..              
T Consensus        67 ---------~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~--------------  122 (256)
T PRK12748         67 ---------VRCEHMEIDLS-QPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKH--------------  122 (256)
T ss_pred             ---------CeEEEEECCCC-CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHH--------------
Confidence                     46889999999 999999999999999999999999999876677778888888877              


Q ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         242 LWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       242 ~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                             +++|+.|++.+++++++.|.++..|+||++||..+..+.++...|++||+|+++++++++.|+.+.||+|++|
T Consensus       123 -------~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i  195 (256)
T PRK12748        123 -------YAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAV  195 (256)
T ss_pred             -------HHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEE
Confidence                   9999999999999999999877778999999999988888899999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         322 LPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       322 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +||.++|++.......   ......+.++...|+|+++...+  +..+....++|
T Consensus       196 ~Pg~~~t~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~--l~~~~~~~~~g  245 (256)
T PRK12748        196 NPGPTDTGWITEELKH---HLVPKFPQGRVGEPVDAARLIAF--LVSEEAKWITG  245 (256)
T ss_pred             EeCcccCCCCChhHHH---hhhccCCCCCCcCHHHHHHHHHH--HhCcccccccC
Confidence            9999999965422110   11112345678899999998653  44444444433

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-32  Score=273.43  Aligned_cols=195  Identities=25%  Similarity=0.289  Sum_probs=169.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+.                      .+
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~----------------------~~   66 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPD----------------------AK   66 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC----------------------Cc
Confidence            34678999999999999999999999999999999999999999888888765431                      45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+.+++||+||||||+... +..+.+.++++.+                     +++|
T Consensus        67 v~~~~~Dl~-d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~---------------------~~vN  123 (313)
T PRK05854         67 LSLRALDLS-SLASVAALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQ---------------------FGTN  123 (313)
T ss_pred             eEEEEecCC-CHHHHHHHHHHHHHhCCCccEEEECCccccC-CccccCcccHHHH---------------------hhhh
Confidence            888999999 9999999999999999999999999998643 3335677788877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEecccccccc------------CCCChhhHHHHHHHHHHHHHHHHHH--ccCCcEE
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLG------------IYGLAAYTSSKFALKGFAEALYMEV--KQSGLTI  318 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------~~~~~~Y~aSKaAl~~l~~sLa~El--~~~gIrV  318 (475)
                      +.|++.+++.++|.|.+. .|+||++||.++..+            .++...|+.||+|+.+|++.|+.++  .++||+|
T Consensus       124 ~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v  202 (313)
T PRK05854        124 HLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITS  202 (313)
T ss_pred             hHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEE
Confidence            999999999999999865 589999999887553            2456789999999999999999864  4679999


Q ss_pred             EEEeCCCCCCCCCcc
Q psy3252         319 TLCLPPDTDTPGFEN  333 (475)
Q Consensus       319 n~V~PG~v~T~~~~~  333 (475)
                      |+|+||+|.|++...
T Consensus       203 ~~v~PG~v~T~~~~~  217 (313)
T PRK05854        203 NLAHPGVAPTNLLAA  217 (313)
T ss_pred             EEEecceeccCcccc
Confidence            999999999998654

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-31  Score=257.26  Aligned_cols=246  Identities=25%  Similarity=0.385  Sum_probs=202.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ++++|||||++|||+++++.|+++|++|++++|+.++.+++.+++...+                        .++.++.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~------------------------~~~~~~~   56 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG------------------------GEALVVP   56 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcEEEEE
Confidence            4689999999999999999999999999999999888887777665432                        4578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccC-CHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM-TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      +|++ |.+++..+++++.++++++|++|||||......+.+. +.++++..                     +++|+.++
T Consensus        57 ~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~N~~~~  114 (263)
T PRK06181         57 TDVS-DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERV---------------------MRVNYLGA  114 (263)
T ss_pred             ccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHH---------------------HHHhhHHH
Confidence            9999 9999999999999999999999999998877777777 78888877                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      +.+++.+++.|.++ .++||++||..+..+.++...|++||+++++++++++.++.++||++++|.||.|.|++......
T Consensus       115 ~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~  193 (263)
T PRK06181        115 VYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD  193 (263)
T ss_pred             HHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc
Confidence            99999999998765 48999999999998999999999999999999999999999999999999999999997653221


Q ss_pred             CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCe
Q psy3252         337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNY  416 (475)
Q Consensus       337 ~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~  416 (475)
                      ......                                       ...+     . +...+++|+++|+.++..+.+++.
T Consensus       194 ~~~~~~---------------------------------------~~~~-----~-~~~~~~~~~dva~~i~~~~~~~~~  228 (263)
T PRK06181        194 GDGKPL---------------------------------------GKSP-----M-QESKIMSAEECAEAILPAIARRKR  228 (263)
T ss_pred             cccccc---------------------------------------cccc-----c-cccCCCCHHHHHHHHHHHhhCCCC
Confidence            100000                                       0000     0 011368999999999999998887


Q ss_pred             eEEeCchhHHHHHHhcCCcc
Q psy3252         417 FSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~P  436 (475)
                      .+..+...+... ++....|
T Consensus       229 ~~~~~~~~~~~~-~~~~~~~  247 (263)
T PRK06181        229 LLVMSLRGRLGR-WLKLIAP  247 (263)
T ss_pred             EEecCchHHHHH-HHHHHCH
Confidence            777766555443 3445666

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-31  Score=259.82  Aligned_cols=224  Identities=28%  Similarity=0.305  Sum_probs=193.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++++++|||||++|||.++++.|+++|++|++++|+.++++++...+.. .                        .++.
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~------------------------~~~~   56 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-G------------------------GRAI   56 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-C------------------------CeEE
Confidence            46789999999999999999999999999999999999888777666543 1                        4688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++++++++++.++++++|++|||||... ..++.+.+.++++..                     +++|+
T Consensus        57 ~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~  114 (251)
T PRK07231         57 AVAADVS-DEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRI---------------------FAVNV  114 (251)
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHH---------------------Hhhhh
Confidence            8999999 999999999999999999999999999854 345677888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++.+++.+++.|.+++.++||++||..+..+.++...|+.||++++.+++.++.+++++||+|++|+||++.|++...
T Consensus       115 ~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~  194 (251)
T PRK07231        115 KSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA  194 (251)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh
Confidence            99999999999999988889999999999999999999999999999999999999999999999999999999998665


Q ss_pred             cccCC----ccccccccccCCCCChHHhhhccceee
Q psy3252         334 EEKSK----PRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       334 ~~~~~----~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .....    ........+.++...|||++++.+.++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  230 (251)
T PRK07231        195 FMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLA  230 (251)
T ss_pred             hhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            43311    111112346678899999999877754

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-32  Score=260.06  Aligned_cols=232  Identities=24%  Similarity=0.293  Sum_probs=191.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++|+++||||++|||+++|+.|+++|++|+++.|+. ...+++.+++...+                        .++
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~   57 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAG------------------------GRA   57 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcC------------------------CeE
Confidence            56789999999999999999999999999998887754 44555555554432                        568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.++++++++++.+.++++|++|||||+....++.+.+.++++.+                     +++|+
T Consensus        58 ~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  115 (245)
T PRK12937         58 IAVQADVA-DAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRT---------------------IATNL  115 (245)
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------Hhhhc
Confidence            89999999 999999999999999999999999999876667778888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++.+++++++.|.+  .|+||++||.++..+.++...|+++|++++.++++++.|+.+.||+|++|+||+++|+++..
T Consensus       116 ~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~  193 (245)
T PRK12937        116 RGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFN  193 (245)
T ss_pred             hHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcc
Confidence            9999999999999864  48999999999988999999999999999999999999999999999999999999998643


Q ss_pred             cccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..... ........+.++...|+|++++.+.  ++......++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~--l~~~~~~~~~g  235 (245)
T PRK12937        194 GKSAEQIDQLAGLAPLERLGTPEEIAAAVAF--LAGPDGAWVNG  235 (245)
T ss_pred             cCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HcCccccCccc
Confidence            22111 1111123477889999999988444  44444444444

>KOG1209|consensus

Probab=100.00  E-value=1.7e-32  Score=251.04  Aligned_cols=184  Identities=24%  Similarity=0.270  Sum_probs=167.3

Q ss_pred             CCEEEEecCC-ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGS-SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas-~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|.|+|||+| ||||.++|++|+++|+.|+.++|+.+....+..+                             ..+..+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-----------------------------~gl~~~   57 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-----------------------------FGLKPY   57 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-----------------------------hCCeeE
Confidence            4689999987 8999999999999999999999998877665432                             346789


Q ss_pred             EeecCCCHHHHHHHHHHHHH-hcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         177 SLDISKDYENIRSALQPAMD-RCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~-~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      .+||+ ++++|..+..++.+ .+|++|+|+||||..-..+..|.+.++.+++                     |+||++|
T Consensus        58 kLDV~-~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~---------------------f~vNvfG  115 (289)
T KOG1209|consen   58 KLDVS-KPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQC---------------------FKVNVFG  115 (289)
T ss_pred             EeccC-ChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhh---------------------hccceee
Confidence            99999 99999999999988 7899999999999988889999999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++++++...+.+ .+|.|||++|.++..+.|..+.|++||+|++.++++|+.||+++||+|..+.||.|.|.+..+
T Consensus       116 ~irM~~a~~h~lik-aKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  116 HIRMCRALSHFLIK-AKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             eehHHHHHHHHHHH-ccceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            99999999955554 579999999999999999999999999999999999999999999999999999999997554

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=9.4e-32  Score=261.24  Aligned_cols=226  Identities=25%  Similarity=0.315  Sum_probs=192.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.         +....                        .++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~------------------------~~~   50 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQED------------------------YPF   50 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcC------------------------Cce
Confidence            557899999999999999999999999999999999985         11111                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.++++++++++.+.++++|++|||||.....++.+.+.++++..                     +++|+
T Consensus        51 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  108 (252)
T PRK08220         51 ATFVLDVS-DAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQT---------------------FAVNA  108 (252)
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            88999999 999999999999999999999999999877777888888888887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++.+++++++.|.+++.|+||++||..+..+.++.+.|++||+++++|+++++.|++++||+||+|+||.++|++...
T Consensus       109 ~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~  188 (252)
T PRK08220        109 GGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRT  188 (252)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhh
Confidence            99999999999999988889999999999988888899999999999999999999999999999999999999997653


Q ss_pred             cccCCc----------cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKP----------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~----------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......          .......+.+++..|||++++.+.  ++.+....++|
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~~~~~~~~~g  239 (252)
T PRK08220        189 LWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLF--LASDLASHITL  239 (252)
T ss_pred             hccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHH--HhcchhcCccC
Confidence            321111          111223467899999999998665  55555555554

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.4e-31  Score=260.30  Aligned_cols=229  Identities=29%  Similarity=0.357  Sum_probs=194.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+++||||++|||.+++++|+++|++|++++|+.+.++++.+++...+                        .++.++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~------------------------~~~~~~~~   56 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAG------------------------GKAVAYKL   56 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CeEEEEEc
Confidence            589999999999999999999999999999999888887777776432                        46788999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+++.++++++.+.++++|+||||||.....++.+.+.++++..                     +++|+.++++
T Consensus        57 Dl~-~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~  114 (254)
T TIGR02415        57 DVS-DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKV---------------------YNVNVKGVLF  114 (254)
T ss_pred             CCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HhhhhHHHHH
Confidence            999 999999999999999999999999999987778888899999888                     9999999999


Q ss_pred             HHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         259 MTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       259 l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      +++.+++.|.+++ .++||++||..+..+.++.+.|++||+++++|+++|+.|+.+.||+|++|+||.++|++.......
T Consensus       115 ~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~  194 (254)
T TIGR02415       115 GIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEE  194 (254)
T ss_pred             HHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhh
Confidence            9999999998865 489999999999999999999999999999999999999999999999999999999986543221


Q ss_pred             Cc-----------cccccccccCCCCChHHhhhccceeeecCCCCCCCC
Q psy3252         338 KP-----------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTP  375 (475)
Q Consensus       338 ~~-----------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~  375 (475)
                      ..           .......+.++..+|||++++..  +++.+....++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~l~~~~~~~~~  241 (254)
T TIGR02415       195 TSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVS--FLASEDSDYIT  241 (254)
T ss_pred             hhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHH--hhcccccCCcc
Confidence            10           01112346788999999999644  34444333333

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=257.23  Aligned_cols=229  Identities=20%  Similarity=0.209  Sum_probs=189.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..+++|+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.+...                       ..+
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------~~~   58 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH-----------------------PEP   58 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC-----------------------CCc
Confidence            346789999999999999999999999999999999999988888777765331                       345


Q ss_pred             EEEEeecCC-CHHHHHHHHHHHHHhc-CCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         174 EYVSLDISK-DYENIRSALQPAMDRC-GPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       174 ~~~~~Dvt~-d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.+|+++ +.+++.++++++.+.+ +++|++|||||.... .++.+.+.++++..                     ++
T Consensus        59 ~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~---------------------~~  117 (239)
T PRK08703         59 FAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQ---------------------YR  117 (239)
T ss_pred             ceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHH---------------------HH
Confidence            678999972 2568899999999888 899999999997643 56778888888877                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccC-CcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQS-GLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~-gIrVn~V~PG~v~T~  329 (475)
                      +|+.|++.++++++|.|.+.+.++||++||..+..+.++...|++||+|++.|+++++.|+.++ +|+|++|+||+|+|+
T Consensus       118 ~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~  197 (239)
T PRK08703        118 INTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSP  197 (239)
T ss_pred             HhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCc
Confidence            9999999999999999998878999999999999898888999999999999999999999887 699999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +.........        ..+...|++++.+.+  +++++....++|
T Consensus       198 ~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~~~g  234 (239)
T PRK08703        198 QRIKSHPGEA--------KSERKSYGDVLPAFV--WWASAESKGRSG  234 (239)
T ss_pred             cccccCCCCC--------ccccCCHHHHHHHHH--HHhCccccCcCC
Confidence            7654322111        113468899987644  445555555554

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.8e-31  Score=258.77  Aligned_cols=233  Identities=28%  Similarity=0.376  Sum_probs=197.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++|++|||||++|||.+++++|+++|++|++++|+.+..+++.+++....                        .++.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~   56 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKG------------------------GNAQA   56 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC------------------------CcEEE
Confidence            468999999999999999999999999999999999988887777665432                        46888


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ +.++++++++.+.+.++++|++|||||.....++.+.+.++++..                     +++|+.+
T Consensus        57 ~~~d~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~  114 (250)
T TIGR03206        57 FACDIT-DRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERL---------------------IAINLTG  114 (250)
T ss_pred             EEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhHH
Confidence            999999 999999999999999999999999999876677777888888877                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      ++++++.+++.|.+.+.++||++||..+..+.++...|+++|+|+++++++++.|+.+.||+|+.|+||.++|++.....
T Consensus       115 ~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~  194 (250)
T TIGR03206       115 ALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDIC  194 (250)
T ss_pred             HHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhh
Confidence            99999999999988878999999999999999999999999999999999999999999999999999999999766432


Q ss_pred             cCC--cc----ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         336 KSK--PR----ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       336 ~~~--~~----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...  +.    ......+.++...|+|+|++...  ++......++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~~~~~~~~~g  239 (250)
T TIGR03206       195 GGAENPEKLREAFTRAIPLGRLGQPDDLPGAILF--FSSDDASFITG  239 (250)
T ss_pred             hccCChHHHHHHHHhcCCccCCcCHHHHHHHHHH--HcCcccCCCcC
Confidence            211  11    11123466889999999998665  34444444443

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=8.3e-32  Score=264.86  Aligned_cols=229  Identities=17%  Similarity=0.176  Sum_probs=176.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ++++||||++|||+++|++|+++|++|++++| +.++++++.+++....+                       .++.++.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-----------------------~~~~~~~   58 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRP-----------------------NSAVTCQ   58 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccC-----------------------CceEEEE
Confidence            58999999999999999999999999999765 56677777666654321                       3566789


Q ss_pred             eecCCCHHHH----HHHHHHHHHhcCCccEEEEccccccCCCcccCCHH-----------HHHHhhhhhhhccccchhhc
Q psy3252         178 LDISKDYENI----RSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ-----------DIKVMEQPLWLRGYHTRLAL  242 (475)
Q Consensus       178 ~Dvt~d~~~v----~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  242 (475)
                      +|++ |.+++    +++++.+.+.+|++|+||||||.....++.+.+.+           ++..+               
T Consensus        59 ~Dv~-d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------  122 (267)
T TIGR02685        59 ADLS-NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL---------------  122 (267)
T ss_pred             ccCC-CchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHH---------------
Confidence            9999 88755    55666666788999999999998655555443332           34444               


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHhC------CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCc
Q psy3252         243 WRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL  316 (475)
Q Consensus       243 ~~~~~v~~vN~~g~~~l~~~~lp~m~~~------~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gI  316 (475)
                            +++|+.++++++++++|.|...      ..++||+++|..+..+.++..+|++||+|+++|+++|+.|++++||
T Consensus       123 ------~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi  196 (267)
T TIGR02685       123 ------FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQI  196 (267)
T ss_pred             ------HHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCe
Confidence                  9999999999999999999653      2468999999999888899999999999999999999999999999


Q ss_pred             EEEEEeCCCCCCCCCcccccCCccccccccccC-CCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         317 TITLCLPPDTDTPGFENEEKSKPRETSLISQTG-GLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       317 rVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +||+|+||++.|+....  ...........+++ ++..||+++++.+.  ++.+...+++|
T Consensus       197 ~v~~v~PG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~~~~~~~~~G  253 (267)
T TIGR02685       197 RVNGVAPGLSLLPDAMP--FEVQEDYRRKVPLGQREASAEQIADVVIF--LVSPKAKYITG  253 (267)
T ss_pred             EEEEEecCCccCccccc--hhHHHHHHHhCCCCcCCCCHHHHHHHHHH--HhCcccCCccc
Confidence            99999999998773211  11111111123444 78899999998755  45555555555

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=261.40  Aligned_cols=223  Identities=19%  Similarity=0.210  Sum_probs=178.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC----hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD----EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      ..+++|+++||||++|||+++|+.|+++|++|++++++    .+.+++..+++...+                       
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~-----------------------   60 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAG-----------------------   60 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhC-----------------------
Confidence            34678999999999999999999999999997776543    344455555554332                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++++|++ +.++++++++++.+.++++|+||||||.....++.+.+.++++++                     +
T Consensus        61 -~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~  117 (257)
T PRK12744         61 -AKAVAFQADLT-TAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEM---------------------F  117 (257)
T ss_pred             -CcEEEEecCcC-CHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHH---------------------H
Confidence             45788999999 999999999999999999999999999877677778888899887                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEe-ccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVIT-ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~i-SS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.+++.++++++|.|.+.  |+||++ ||..+ .+.++...|++||+|+++|+++|+.|+.++||+||+|+||+|.|
T Consensus       118 ~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t  194 (257)
T PRK12744        118 AVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLG-AFTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDT  194 (257)
T ss_pred             hhhhhHHHHHHHHHHHhhccC--CCEEEEecchhc-ccCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCcccc
Confidence            999999999999999998754  678876 45444 34677889999999999999999999999999999999999999


Q ss_pred             CCCcccccCCc----cccccccccC--CCCChHHhhhccceee
Q psy3252         329 PGFENEEKSKP----RETSLISQTG--GLYRPEVVKQSGLTIT  365 (475)
Q Consensus       329 ~~~~~~~~~~~----~~~~~~~~~~--~~~~pe~va~~~~~~~  365 (475)
                      +++.+......    .......+..  |+..|+|++++...++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (257)
T PRK12744        195 PFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLV  237 (257)
T ss_pred             chhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhh
Confidence            97654221111    1111122333  7899999999865533

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.7e-31  Score=259.93  Aligned_cols=231  Identities=18%  Similarity=0.205  Sum_probs=186.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++|+++||||++|||+++|+.|+++|++|++++|+.++++++.+++....+.                      ..+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~----------------------~~~~~   59 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS----------------------KKLSL   59 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCC----------------------CceeE
Confidence            46899999999999999999999999999999999998888887777543221                      34667


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc---CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL---CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.+|++ |.+++.++++++.+.++++|+||||||...   ..++.+.+.++++..                     +++|
T Consensus        60 ~~~Dl~-d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~---------------------~~~n  117 (256)
T PRK09186         60 VELDIT-DQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNEN---------------------LSLH  117 (256)
T ss_pred             EEecCC-CHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHH---------------------HHHh
Confidence            799999 999999999999999999999999998643   245677888888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      +.+++.++++++|.|.+++.|+||++||..+..+..          ....|++||+++++|+++++.|+.++||+||+|+
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~  197 (256)
T PRK09186        118 LGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVS  197 (256)
T ss_pred             hhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEe
Confidence            999999999999999988889999999987754311          1247999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         323 PPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       323 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ||.+.|+.....    ........+.+++..|+|++++.+.++  .....+++|
T Consensus       198 Pg~~~~~~~~~~----~~~~~~~~~~~~~~~~~dva~~~~~l~--~~~~~~~~g  245 (256)
T PRK09186        198 PGGILDNQPEAF----LNAYKKCCNGKGMLDPDDICGTLVFLL--SDQSKYITG  245 (256)
T ss_pred             cccccCCCCHHH----HHHHHhcCCccCCCCHHHhhhhHhhee--ccccccccC
Confidence            999988742211    111111234567899999998865543  333444444

>KOG1014|consensus

Probab=100.00  E-value=1.3e-31  Score=260.07  Aligned_cols=236  Identities=25%  Similarity=0.305  Sum_probs=195.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++++||||+.|||++.|++||++|.+|++++|++++|+++++||.+.++                       .++.++
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-----------------------vev~~i  104 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-----------------------VEVRII  104 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-----------------------cEEEEE
Confidence            368999999999999999999999999999999999999999999998775                       678999


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      .+|.+ +.+.+-+.+.+..+. ..|.+||||+|+..  +..+.+.+.+.++..                     +.||..
T Consensus       105 ~~Dft-~~~~~ye~i~~~l~~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~i---------------------i~vN~~  161 (312)
T KOG1014|consen  105 AIDFT-KGDEVYEKLLEKLAG-LDVGILVNNVGMSYDYPESFLKYPEGELQNI---------------------INVNIL  161 (312)
T ss_pred             EEecC-CCchhHHHHHHHhcC-CceEEEEecccccCCCcHHHHhCchhhhhhe---------------------eEEecc
Confidence            99999 434322222222221 36889999999986  455666666655555                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      ++..+++.++|.|.++++|-|||+||.++..+.|.++.|++||+.+..|+++|+.|+..+||.|.+|.|+.|.|+|....
T Consensus       162 ~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  162 SVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             hHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999964421


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g  414 (475)
                      .                                                         +.....+||..|+..++.+.  
T Consensus       242 ~---------------------------------------------------------~sl~~ps~~tfaksal~tiG--  262 (312)
T KOG1014|consen  242 K---------------------------------------------------------PSLFVPSPETFAKSALNTIG--  262 (312)
T ss_pred             C---------------------------------------------------------CCCcCcCHHHHHHHHHhhcC--
Confidence            1                                                         01125689999999999886  


Q ss_pred             CeeEEeCchhHHHHHHhcCCcch
Q psy3252         415 NYFSTVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~P~  437 (475)
                      ....+.|..++.+..++-.++|.
T Consensus       263 ~~~~TtGy~~H~i~~~~~~~~p~  285 (312)
T KOG1014|consen  263 NASETTGYLNHAIQVLLITLLPL  285 (312)
T ss_pred             CcccCCCccchHHHHHHHHHhHH
Confidence            44556666666666666566673

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-31  Score=258.94  Aligned_cols=230  Identities=21%  Similarity=0.230  Sum_probs=191.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++||||++|||.++++.|+++|++|++++|+ .+.++++.+++......                      ..+.++.+|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~D   59 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGE----------------------GVAFAAVQD   59 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCC----------------------ceEEEEEee
Confidence            7999999999999999999999999999998 77777777666543211                      345678999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.++++++++++.+.++++|++|||||.....++.+.+.++++.+                     +++|+.+++.+
T Consensus        60 ~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~~  117 (251)
T PRK07069         60 VT-DEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRV---------------------MAINVESIFLG  117 (251)
T ss_pred             cC-CHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHH---------------------HHHhhHHHHHH
Confidence            99 999999999999999999999999999887777888888898887                     99999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCC--cEEEEEeCCCCCCCCCcccccC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSG--LTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~g--IrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      ++.+++.|.+++.|+||++||..+..+.++...|+++|+++++|+++++.|+++++  |+|++|+||+++|++.......
T Consensus       118 ~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~  197 (251)
T PRK07069        118 CKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQR  197 (251)
T ss_pred             HHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhh
Confidence            99999999988789999999999999999999999999999999999999998765  9999999999999987543211


Q ss_pred             C--cc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         338 K--PR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       338 ~--~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .  +.   ......+.+++..|+|++++.+.  ++.+....++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~--l~~~~~~~~~g  239 (251)
T PRK07069        198 LGEEEATRKLARGVPLGRLGEPDDVAHAVLY--LASDESRFVTG  239 (251)
T ss_pred             ccchhHHHHHhccCCCCCCcCHHHHHHHHHH--HcCccccCccC
Confidence            1  10   01112356788999999988665  44444444444

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-31  Score=267.39  Aligned_cols=222  Identities=23%  Similarity=0.220  Sum_probs=180.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.                            .
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----------------------------~   72 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----------------------------G   72 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----------------------------h
Confidence            356789999999999999999999999999999999999888777665542                            2


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+.++++|+||||||+...  ..+.+.++++..                     +++|
T Consensus        73 v~~~~~Dl~-d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~--~~~~~~~~~~~~---------------------~~vN  128 (315)
T PRK06196         73 VEVVMLDLA-DLESVRAFAERFLDSGRRIDILINNAGVMAC--PETRVGDGWEAQ---------------------FATN  128 (315)
T ss_pred             CeEEEccCC-CHHHHHHHHHHHHhcCCCCCEEEECCCCCCC--CCccCCccHHHH---------------------HHHh
Confidence            567899999 9999999999999999999999999997643  234456667766                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccc------------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANL------------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                      +.|++++++.++|.|.+++.++||++||..+..            +.++...|++||+|++.|++.|+.++.++||+||+
T Consensus       129 ~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~  208 (315)
T PRK06196        129 HLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFS  208 (315)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            999999999999999988778999999976532            23345789999999999999999999999999999


Q ss_pred             EeCCCCCCCCCcccccCCcccccc----ccccC-CCCChHHhhhccceeee
Q psy3252         321 CLPPDTDTPGFENEEKSKPRETSL----ISQTG-GLYRPEVVKQSGLTITL  366 (475)
Q Consensus       321 V~PG~v~T~~~~~~~~~~~~~~~~----~~~~~-~~~~pe~va~~~~~~~~  366 (475)
                      |+||+|.|++..............    ..+++ +...||++|++.+.+..
T Consensus       209 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  259 (315)
T PRK06196        209 VHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAAT  259 (315)
T ss_pred             eeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhc
Confidence            999999999865432211110011    11232 57899999999877665

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2e-31  Score=256.62  Aligned_cols=223  Identities=26%  Similarity=0.315  Sum_probs=179.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++|++|||||++|||+++|+.|+++|++|+++++ +.+.++++..++                             .+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----------------------------~~   53 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----------------------------GA   53 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----------------------------CC
Confidence            467899999999999999999999999999998876 444444433221                             13


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++    .++++|++|||||.....+..+.+.++++.+                     +++|+
T Consensus        54 ~~~~~D~~-~~~~~~~~~~----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  107 (237)
T PRK12742         54 TAVQTDSA-DRDAVIDVVR----KSGALDILVVNAGIAVFGDALELDADDIDRL---------------------FKINI  107 (237)
T ss_pred             eEEecCCC-CHHHHHHHHH----HhCCCcEEEECCCCCCCCCcccCCHHHHHHH---------------------HhHHH
Confidence            46789999 8888777664    4678999999999876666777888899888                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.+++.+++.|.+  .|+||++||..+. .+.++...|+++|+++++++++++.|++++||+||+|+||+++|++..
T Consensus       108 ~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~  185 (237)
T PRK12742        108 HAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP  185 (237)
T ss_pred             HHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc
Confidence            9999999999999864  4899999998874 577888999999999999999999999999999999999999999865


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ...+ .........+++|...|||++++.  .+++++...+++|.
T Consensus       186 ~~~~-~~~~~~~~~~~~~~~~p~~~a~~~--~~l~s~~~~~~~G~  227 (237)
T PRK12742        186 ANGP-MKDMMHSFMAIKRHGRPEEVAGMV--AWLAGPEASFVTGA  227 (237)
T ss_pred             cccH-HHHHHHhcCCCCCCCCHHHHHHHH--HHHcCcccCcccCC
Confidence            3211 111112234678999999999865  45566666666663

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=258.41  Aligned_cols=225  Identities=27%  Similarity=0.310  Sum_probs=192.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||+++||||++|||.++|++|+++|++|++++|+.+.+++..+++. .+                        .++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~------------------------~~~   55 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AG------------------------GRA   55 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cC------------------------CeE
Confidence            35789999999999999999999999999999999999887777666554 11                        568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.++++++|+||||||......+.+.+.++++..                     +++|+
T Consensus        56 ~~~~~D~~-~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  113 (252)
T PRK06138         56 FARQGDVG-SAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAV---------------------MRVNV  113 (252)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------Hhhhh
Confidence            89999999 999999999999999999999999999877777778888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++.+++.+++.|++++.++||++||..+..+.++...|+++|++++.++++++.|+.++||+|++|+||.+.|++..+
T Consensus       114 ~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (252)
T PRK06138        114 GGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR  193 (252)
T ss_pred             hhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh
Confidence            99999999999999988889999999999988888999999999999999999999999999999999999999998665


Q ss_pred             cccCC--ccc----cccccccCCCCChHHhhhccceee
Q psy3252         334 EEKSK--PRE----TSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       334 ~~~~~--~~~----~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .....  +..    .....+.+++..|++++++.+.+.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  231 (252)
T PRK06138        194 IFARHADPEALREALRARHPMNRFGTAEEVAQAALFLA  231 (252)
T ss_pred             hhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            42211  110    011234556788999998876643

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-31  Score=263.91  Aligned_cols=225  Identities=25%  Similarity=0.308  Sum_probs=188.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ..+++||++|||||++|||.++|++|+++|++|++++|+.+ .++...+.+...+                        .
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~------------------------~   96 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEG------------------------V   96 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC------------------------C
Confidence            35778999999999999999999999999999999999853 3444444443322                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.++.+|++ +.+++.++++++.+.++++|+||||||.... .++.+.+.++++..                     ++
T Consensus        97 ~~~~~~~Dl~-~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~  154 (290)
T PRK06701         97 KCLLIPGDVS-DEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKT---------------------FK  154 (290)
T ss_pred             eEEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHH---------------------Hh
Confidence            6788999999 9999999999999999999999999998643 56778888888877                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.+++.+++++++.|.+  .|+||++||..+..+.++...|++||+|+++|+++++.++.++||+|++|+||.|+|++
T Consensus       155 ~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~  232 (290)
T PRK06701        155 TNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL  232 (290)
T ss_pred             hhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence            9999999999999999964  37999999999999989999999999999999999999999999999999999999997


Q ss_pred             CcccccCCc-cccccccccCCCCChHHhhhccceee
Q psy3252         331 FENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       331 ~~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ......... .......++++...|+|++++.+.++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll  268 (290)
T PRK06701        233 IPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLA  268 (290)
T ss_pred             cccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHc
Confidence            654321111 11112346788999999999866543

>KOG1208|consensus

Probab=100.00  E-value=3.3e-31  Score=265.10  Aligned_cols=263  Identities=24%  Similarity=0.242  Sum_probs=203.4

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ...++.|++++||||++|||+++|+.|+++|++|++.+||.++.++++++|.+..++                      .
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~----------------------~   86 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKAN----------------------Q   86 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC----------------------C
Confidence            446678899999999999999999999999999999999999999999999874332                      6


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.+++||++ +.++|+++.+++.+.++++|+||||||+..+..  ..+.|.++..                     |.|
T Consensus        87 ~i~~~~lDLs-sl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~---------------------~~t  142 (314)
T KOG1208|consen   87 KIRVIQLDLS-SLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF--SLTKDGLELT---------------------FAT  142 (314)
T ss_pred             ceEEEECCCC-CHHHHHHHHHHHHhcCCCccEEEeCcccccCCc--ccCccchhhe---------------------ehh
Confidence            7899999999 999999999999999999999999999986644  5566778877                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc-------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG-------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                      |++|+|.+++.++|.|+++..+|||++||..+...             .....+|+.||.+...+++.|++.+.+ ||.+
T Consensus       143 N~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~  221 (314)
T KOG1208|consen  143 NYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTT  221 (314)
T ss_pred             hhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceE
Confidence            99999999999999999988899999999876110             122335999999999999999999988 9999


Q ss_pred             EEEeCCCCCCCCCcccccCCccccccccccC-CC-CChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCC
Q psy3252         319 TLCLPPDTDTPGFENEEKSKPRETSLISQTG-GL-YRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGG  396 (475)
Q Consensus       319 n~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~-~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  396 (475)
                      ++++||.|.|+......   .........+. .+ -.|++-|++.+...+...-.....-+..+....+.        ..
T Consensus       222 ~~~hPG~v~t~~l~r~~---~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~~~~--------~~  290 (314)
T KOG1208|consen  222 YSVHPGVVKTTGLSRVN---LLLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCAIAEP--------SE  290 (314)
T ss_pred             EEECCCcccccceecch---HHHHHHHHHHHHHhccCHHHHhhheehhccCccccCcccccccccccccc--------cc
Confidence            99999999999554411   11111111111 12 36788888877766665434333333222222221        22


Q ss_pred             CCChHHHHHHHHHHHh
Q psy3252         397 LYRPEVVAKQLLEDAL  412 (475)
Q Consensus       397 ~~~~e~vA~~i~~ai~  412 (475)
                      ...+++.++.+++.-+
T Consensus       291 ~a~d~~~~~~lw~~s~  306 (314)
T KOG1208|consen  291 EALDEELAEKLWKFSE  306 (314)
T ss_pred             ccCCHHHHHHHHHHHH
Confidence            4566778888776554

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.9e-31  Score=258.05  Aligned_cols=228  Identities=23%  Similarity=0.290  Sum_probs=186.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++||+++||||++|||.+++++|+++|++|++++|+...+++..+++.                             ..+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----------------------------~~~   55 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----------------------------GLF   55 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----------------------------CcE
Confidence            678999999999999999999999999999999999877665544321                             146


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC--CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +.+|++ +.++++++++++.+.++++|++|||||....  .++.+.+.+.++..                     +++|+
T Consensus        56 ~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~---------------------~~~n~  113 (255)
T PRK06057         56 VPTDVT-DEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRV---------------------QDVNL  113 (255)
T ss_pred             EEeeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHH---------------------HHHhc
Confidence            889999 9999999999999999999999999998643  35566778888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC-CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|++++++.++|.|.+++.|+||++||..+..+.+ +...|++||+|+.+++++|+.|+.++||+|++|+||.++|++..
T Consensus       114 ~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~  193 (255)
T PRK06057        114 TSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQ  193 (255)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhh
Confidence            99999999999999987789999999988777654 67889999999999999999999999999999999999999866


Q ss_pred             ccccCCcccc---ccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPRET---SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~~~---~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......+...   ....+.+++..|++++++..  +++......++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~l~~~~~~~~~g  238 (255)
T PRK06057        194 ELFAKDPERAARRLVHVPMGRFAEPEEIAAAVA--FLASDDASFITA  238 (255)
T ss_pred             hhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCccccCccC
Confidence            4432221111   11235678999999999854  344444444443

>PLN00015 protochlorophyllide reductase

Probab=99.98  E-value=2.1e-31  Score=267.89  Aligned_cols=220  Identities=20%  Similarity=0.191  Sum_probs=177.6

Q ss_pred             EEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         102 SVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       102 LITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      |||||++|||+++|++|+++| ++|++++|+.++++++.+++....                        .++.++.+|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~~~~~~Dl   56 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPK------------------------DSYTVMHLDL   56 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCC------------------------CeEEEEEecC
Confidence            599999999999999999999 999999999888877776654211                        4577899999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      + |.++++++++++.+.+++||+||||||+... .+..+.+.++++.+                     |++|+.|++.+
T Consensus        57 ~-d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~---------------------~~vN~~g~~~l  114 (308)
T PLN00015         57 A-SLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELS---------------------VGTNHLGHFLL  114 (308)
T ss_pred             C-CHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHH---------------------HHHHhHHHHHH
Confidence            9 9999999999999889999999999998643 35567788899988                     99999999999


Q ss_pred             HHHHHHHHHhCC--CCeEEEecccccccc-----------------------------------CCCChhhHHHHHHHHH
Q psy3252         260 TKALVEGMKQRG--RGCIVITASQAANLG-----------------------------------IYGLAAYTSSKFALKG  302 (475)
Q Consensus       260 ~~~~lp~m~~~~--~g~IV~iSS~a~~~~-----------------------------------~~~~~~Y~aSKaAl~~  302 (475)
                      ++.++|.|.+++  .|+||++||.++..+                                   ..+..+|++||+|+..
T Consensus       115 ~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~  194 (308)
T PLN00015        115 SRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNML  194 (308)
T ss_pred             HHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHH
Confidence            999999998876  689999999876421                                   1235679999999999


Q ss_pred             HHHHHHHHHcc-CCcEEEEEeCCCC-CCCCCcccccCCcccc--ccccccCCCCChHHhhhccceeeec
Q psy3252         303 FAEALYMEVKQ-SGLTITLCLPPDT-DTPGFENEEKSKPRET--SLISQTGGLYRPEVVKQSGLTITLC  367 (475)
Q Consensus       303 l~~sLa~El~~-~gIrVn~V~PG~v-~T~~~~~~~~~~~~~~--~~~~~~~~~~~pe~va~~~~~~~~~  367 (475)
                      +++.|+.++.+ .||+||+|+||+| .|+|..+.........  ....+.+++.+||+.|+..+.+...
T Consensus       195 ~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~  263 (308)
T PLN00015        195 TMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSD  263 (308)
T ss_pred             HHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccc
Confidence            99999999975 6999999999999 7888654221110000  0112456789999999977664443

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.5e-31  Score=253.91  Aligned_cols=220  Identities=25%  Similarity=0.255  Sum_probs=181.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|++|||||++|||.++|++|+++|++|++++ |+.+..++..+++...+                        .++.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~------------------------~~~~~~   57 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG------------------------GEALAV   57 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC------------------------CcEEEE
Confidence            57999999999999999999999999998887 45555666555554432                        357789


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      .+|++ |.+++.++++++.+.++++|+||||||.... .++.+.+.++++..                     +++|+.+
T Consensus        58 ~~Dl~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~~~  115 (248)
T PRK06123         58 AADVA-DEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRI---------------------FATNVVG  115 (248)
T ss_pred             EeccC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHH---------------------HHHHhHH
Confidence            99999 9999999999999999999999999998743 45677888888877                     9999999


Q ss_pred             HHHHHHHHHHHHHhCC---CCeEEEeccccccccCCCC-hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRG---RGCIVITASQAANLGIYGL-AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~~-~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      ++.+++++++.|.++.   .|+||++||.++..+.++. ..|++||+++++|+++++.|+.++||+|++|+||.+.|++.
T Consensus       116 ~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~  195 (248)
T PRK06123        116 SFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIH  195 (248)
T ss_pred             HHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchh
Confidence            9999999999997653   4789999999988887764 67999999999999999999999999999999999999975


Q ss_pred             cccccCCc-cccccccccCCCCChHHhhhccce
Q psy3252         332 ENEEKSKP-RETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       332 ~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      ........ .......|+++.+.|||++++.+.
T Consensus       196 ~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~  228 (248)
T PRK06123        196 ASGGEPGRVDRVKAGIPMGRGGTAEEVARAILW  228 (248)
T ss_pred             hccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            43211110 011113477888999999998765

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.98  E-value=7e-31  Score=256.36  Aligned_cols=225  Identities=25%  Similarity=0.327  Sum_probs=192.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||++++++|+++|++|++++|++++.++..+++.+.+                        .++.
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   59 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG------------------------GKAI   59 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC------------------------ceEE
Confidence            4678999999999999999999999999999999999988888887776543                        4678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.++++++++++.+.++++|+||||||......+.+.+.++++..                     +++|+.
T Consensus        60 ~~~~Dl~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  117 (262)
T PRK13394         60 GVAMDVT-NEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKM---------------------QAIHVD  117 (262)
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHH---------------------HHhhhh
Confidence            8999999 999999999999999999999999999876667777788888877                     999999


Q ss_pred             HHHHHHHHHHHHH-HhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         255 GTIHMTKALVEGM-KQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       255 g~~~l~~~~lp~m-~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      +++.+++.+++.| .+.+.++||++||..+..+.+....|+++|+++.+++++++.++.+.||++|+|+||.++|++...
T Consensus       118 ~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~  197 (262)
T PRK13394        118 GAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK  197 (262)
T ss_pred             hHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh
Confidence            9999999999999 666678999999999888888889999999999999999999999999999999999999997643


Q ss_pred             cccCCcc---------ccc---cccccCCCCChHHhhhccceee
Q psy3252         334 EEKSKPR---------ETS---LISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       334 ~~~~~~~---------~~~---~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .......         ...   ...+.+++..|+|++++.+.++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~  241 (262)
T PRK13394        198 QIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS  241 (262)
T ss_pred             hhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence            3211100         000   1224567899999999865544

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.98  E-value=8.7e-31  Score=254.04  Aligned_cols=231  Identities=22%  Similarity=0.255  Sum_probs=187.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++|||||++|||.++|+.|+++|++|+++ .|+.+.++++.+++....                        .++.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~   57 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAG------------------------GRACVV   57 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------------------------CcEEEE
Confidence            4699999999999999999999999999876 467777777766665432                        468899


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      .||++ +.++++++++++.+.++++|+||||||+... .++.+.+.++++.+                     +++|+.+
T Consensus        58 ~~Dl~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~~~  115 (248)
T PRK06947         58 AGDVA-NEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRM---------------------FDTNVLG  115 (248)
T ss_pred             EeccC-CHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHH---------------------HHhccHH
Confidence            99999 9999999999999999999999999998744 45677888888877                     9999999


Q ss_pred             HHHHHHHHHHHHHhCC---CCeEEEeccccccccCCC-ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRG---RGCIVITASQAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~-~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      ++++++.+++.|..++   .|+||++||.++..+.+. +..|++||+++++|+++|+.++.+.||+|+.|+||+++|++.
T Consensus       116 ~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~  195 (248)
T PRK06947        116 AYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIH  195 (248)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccc
Confidence            9999999999987654   578999999998877664 578999999999999999999999999999999999999976


Q ss_pred             cccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ....... ........+.++..+||++++..+.+  +......++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l--~~~~~~~~~G  239 (248)
T PRK06947        196 ASGGQPGRAARLGAQTPLGRAGEADEVAETIVWL--LSDAASYVTG  239 (248)
T ss_pred             cccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHH--cCccccCcCC
Confidence            4321111 01111234667889999999887664  3333344444

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.98  E-value=1.2e-30  Score=251.51  Aligned_cols=219  Identities=26%  Similarity=0.351  Sum_probs=187.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      |++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...+                        .++.++.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~------------------------~~~~~~~   56 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALG------------------------FDFRVVE   56 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhC------------------------CceEEEE
Confidence            68999999999999999999999999999888 6666665555544322                        4688899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.+++.++++++.+.++++|+||||||......+.+.+.++++..                     +++|+.+++
T Consensus        57 ~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  114 (242)
T TIGR01829        57 GDVS-SFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAV---------------------IDTNLNSVF  114 (242)
T ss_pred             ecCC-CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 999999999999999999999999999877667777888888877                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      .+++.+++.|.+.+.++||++||..+..+.++...|+++|++++.|+++++.|+.+.||++++++||++.|++.......
T Consensus       115 ~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~  194 (242)
T TIGR01829       115 NVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRED  194 (242)
T ss_pred             HHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchH
Confidence            99999999999888899999999999989999999999999999999999999999999999999999999986543222


Q ss_pred             CccccccccccCCCCChHHhhhccce
Q psy3252         338 KPRETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       338 ~~~~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      .........+.+++..|++++++..+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~a~~~~~  220 (242)
T TIGR01829       195 VLNSIVAQIPVGRLGRPEEIAAAVAF  220 (242)
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            11111123467889999999998644

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=9.8e-31  Score=253.56  Aligned_cols=224  Identities=21%  Similarity=0.319  Sum_probs=186.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++|++++||||++|||.++++.|+++|++|++++|+.+++++..+++...+                        .++.
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~------------------------~~~~   57 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG------------------------TEVR   57 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CceE
Confidence            4679999999999999999999999999999999999988888777776543                        4678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCc---------ccCCHHHHHHhhhhhhhccccchhhcccc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL---------EEMTMQDIKVMEQPLWLRGYHTRLALWRS  245 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (475)
                      ++.+|++ +.++++++++.+.+.++++|++|||||.......         .+.+.++++.+                  
T Consensus        58 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------  118 (253)
T PRK08217         58 GYAANVT-DEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSV------------------  118 (253)
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHH------------------
Confidence            8999999 9999999999999888999999999997543222         45566777766                  


Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHhC-CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         246 WTVIDLNLYGTIHMTKALVEGMKQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       246 ~~v~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                         +++|+.+++++++.+++.|.++ ..+.||++||.. ..+.++...|++||+|+++++++|+.|+.++||++++|+||
T Consensus       119 ---~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg  194 (253)
T PRK08217        119 ---IDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPG  194 (253)
T ss_pred             ---HhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeC
Confidence               9999999999999999999876 457899999874 45778889999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCccccccccccCCCCChHHhhhccceee
Q psy3252         325 DTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       325 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      +++|++.....+..........+.++...|||++++...++
T Consensus       195 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  235 (253)
T PRK08217        195 VIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFII  235 (253)
T ss_pred             CCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHH
Confidence            99999875433221111122346678899999999886654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.98  E-value=9.2e-31  Score=252.76  Aligned_cols=220  Identities=25%  Similarity=0.287  Sum_probs=184.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      |+++||||++|||.++|+.|+++|++|++++|+.. ..++....+...                        ..++.++.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~~~   58 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT------------------------EDQVRLKE   58 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc------------------------CCeEEEEE
Confidence            68999999999999999999999999999999854 122222221111                        14688999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.+++.++++.+.++++++|++|||||.....++.+.+.++++..                     +++|+.+++
T Consensus        59 ~D~~-~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  116 (245)
T PRK12824         59 LDVT-DTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDV---------------------INTNLNSVF  116 (245)
T ss_pred             cCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 999999999999999999999999999887777788889999887                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      ++++.+++.|.+.+.++||++||..+..+.++...|++||+|+++|+++++.|+.+.||++++|+||++.|++.......
T Consensus       117 ~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~  196 (245)
T PRK12824        117 NVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPE  196 (245)
T ss_pred             HHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHH
Confidence            99999999999877899999999999989999999999999999999999999999999999999999999976543221


Q ss_pred             CccccccccccCCCCChHHhhhcccee
Q psy3252         338 KPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       338 ~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      .........+.++...|++++++...+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~va~~~~~l  223 (245)
T PRK12824        197 VLQSIVNQIPMKRLGTPEEIAAAVAFL  223 (245)
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            111111223567888999999986443

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.5e-30  Score=256.76  Aligned_cols=227  Identities=26%  Similarity=0.268  Sum_probs=191.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||.++++.|+++|++|++++|+.++++...+++.....                      ..++.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------------------~~~~~   61 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG----------------------AGAVR   61 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC----------------------CCceE
Confidence            46789999999999999999999999999999999998887777666654321                      04678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ +.+++.++++++.+.++++|++|||||.... .++.+.+.++++.+                     +++|+
T Consensus        62 ~~~~Dl~-~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~  119 (276)
T PRK05875         62 YEPADVT-DEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRT---------------------VDLNV  119 (276)
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHH---------------------HHHhh
Confidence            8999999 9999999999999999999999999997532 56667788888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++.+++++++.|.+++.|+||++||..+..+.++.+.|++||++++.++++++.|+...||+|++|+||.++|++...
T Consensus       120 ~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        120 NGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence            99999999999999887788999999999988888899999999999999999999999999999999999999998754


Q ss_pred             cccCCcccc--ccccccCCCCChHHhhhccceee
Q psy3252         334 EEKSKPRET--SLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       334 ~~~~~~~~~--~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .........  ....+.++.+.|+|++++.+.++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  233 (276)
T PRK05875        200 ITESPELSADYRACTPLPRVGEVEDVANLAMFLL  233 (276)
T ss_pred             cccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc
Confidence            322211111  11345678899999998766543

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-30  Score=252.95  Aligned_cols=223  Identities=22%  Similarity=0.228  Sum_probs=184.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      |+.+++|++|||||++|||.+++++|+++|++|++++|+.+.++.+.+++.+..                        .+
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~------------------------~~   56 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADG------------------------GT   56 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------Cc
Confidence            356789999999999999999999999999999999999887777776665432                        35


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc---CCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL---CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      +.++.+|++ +.++++++++++.+.++++|+||||||+..   ..++.+.+.+++++.                     +
T Consensus        57 ~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~---------------------~  114 (250)
T PRK07774         57 AIAVQVDVS-DPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKF---------------------M  114 (250)
T ss_pred             EEEEEcCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHH---------------------H
Confidence            678899999 999999999999999999999999999863   245667778888877                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.+++++++++++.|.+.+.|+||++||..++.   +.+.|++||+|+++++++++.++.+.||++++|+||.++|+
T Consensus       115 ~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  191 (250)
T PRK07774        115 SVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTE  191 (250)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCc
Confidence            999999999999999999887789999999988753   45789999999999999999999999999999999999999


Q ss_pred             CCcccccCCcc-ccccccccCCCCChHHhhhcccee
Q psy3252         330 GFENEEKSKPR-ETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       330 ~~~~~~~~~~~-~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      +.......... ......+..+...|+|++++.+.+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~  227 (250)
T PRK07774        192 ATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFL  227 (250)
T ss_pred             cccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            76543221110 011122445678999999886443

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.5e-31  Score=254.02  Aligned_cols=219  Identities=27%  Similarity=0.307  Sum_probs=179.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|+++||||++|||.++|++|+++|++|++++|+....         ..                        .++.
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~------------------------~~~~   48 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LS------------------------GNFH   48 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cC------------------------CcEE
Confidence            46789999999999999999999999999999999975321         00                        3577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ +.      ++++.+.++++|++|||||+.. ..++.+.+.++++.+                     +++|+
T Consensus        49 ~~~~D~~-~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~  100 (235)
T PRK06550         49 FLQLDLS-DD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHI---------------------FDTNL  100 (235)
T ss_pred             EEECChH-HH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            8999999 65      4555566789999999999763 356677888888887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .++++++++++|.|.+++.|+||++||..+..+.++...|+++|+++++++++++.|+.++||+||+|+||+|+|++...
T Consensus       101 ~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~  180 (235)
T PRK06550        101 TSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA  180 (235)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc
Confidence            99999999999999988889999999999999989999999999999999999999999999999999999999997643


Q ss_pred             cccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......  ......+++++..|||++++.+.  ++++....++|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~--l~s~~~~~~~g  223 (235)
T PRK06550        181 DFEPGGLADWVARETPIKRWAEPEEVAELTLF--LASGKADYMQG  223 (235)
T ss_pred             ccCchHHHHHHhccCCcCCCCCHHHHHHHHHH--HcChhhccCCC
Confidence            2211111  11123578899999999998765  44554455554

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-30  Score=253.21  Aligned_cols=225  Identities=24%  Similarity=0.268  Sum_probs=190.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++|+++||||++|||.+++++|+++|++ |++++|+.+++++..+++.+.+                        .++
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~   58 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALG------------------------AKA   58 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcC------------------------CeE
Confidence            467899999999999999999999999998 9999999887777766664332                        567


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++.+.+.++++|++|||||......+.+.+.++++.+                     +++|+
T Consensus        59 ~~~~~D~~-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  116 (260)
T PRK06198         59 VFVQADLS-DVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRH---------------------FAVNV  116 (260)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------HHHhh
Confidence            88999999 999999999999999999999999999877667778888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.+++.+++.|.+++ .|+||++||..+..+.++...|+++|+++++|+++++.|+...||+|++|+||+++|++..
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~  196 (260)
T PRK06198        117 RAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGED  196 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchh
Confidence            999999999999998764 5899999999998888889999999999999999999999999999999999999999743


Q ss_pred             ccccC---C-cc---ccccccccCCCCChHHhhhccceee
Q psy3252         333 NEEKS---K-PR---ETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       333 ~~~~~---~-~~---~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .....   . ..   ......+.++...|||++++.+.+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  236 (260)
T PRK06198        197 RIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLL  236 (260)
T ss_pred             hhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHc
Confidence            21110   0 00   1111235678899999999877644

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-30  Score=253.21  Aligned_cols=223  Identities=20%  Similarity=0.196  Sum_probs=185.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ...+|++|||||++|||++++++|+++|++|+++++ +.+.++++.+++...+                        .++
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~   61 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG------------------------RRA   61 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------------------------CeE
Confidence            346889999999999999999999999999988765 4566666666665432                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++++.+.++++|+||||||.....++.+.+.++++.+                     +++|+
T Consensus        62 ~~~~~Dl~-d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  119 (258)
T PRK09134         62 VALQADLA-DEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRH---------------------MATNL  119 (258)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHH---------------------HHHhh
Confidence            88999999 999999999999999999999999999877677778888888887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|++++++++++.|.++..|+||+++|..+..+.|+...|++||+++++++++++.|+.+. |+|++|+||++.|+....
T Consensus       120 ~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~  198 (258)
T PRK09134        120 RAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS  198 (258)
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC
Confidence            9999999999999988777999999998887778888899999999999999999999876 999999999999874321


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeee
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITL  366 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~  366 (475)
                      ... . .......+.++...|+|++++.+.++-
T Consensus       199 ~~~-~-~~~~~~~~~~~~~~~~d~a~~~~~~~~  229 (258)
T PRK09134        199 PED-F-ARQHAATPLGRGSTPEEIAAAVRYLLD  229 (258)
T ss_pred             hHH-H-HHHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence            110 0 011112356778999999998766553

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=252.87  Aligned_cols=224  Identities=29%  Similarity=0.365  Sum_probs=192.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++|++|||||+++||.++|++|+++|++|++++|+.+++++...++...+                        .++++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~   57 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG------------------------GKAIG   57 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC------------------------CcEEE
Confidence            468999999999999999999999999999999999998888777775532                        46888


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ +.++++++++++.+.++++|+||||||........+.+.++++..                     +++|+.+
T Consensus        58 ~~~Dl~-~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~---------------------~~~n~~~  115 (258)
T PRK12429         58 VAMDVT-DEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKM---------------------IAIMLDG  115 (258)
T ss_pred             EEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------Hhhcchh
Confidence            999999 999999999999999999999999999887777778888888877                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      ++++++.+++.|.+++.++||++||..+..+.++.+.|+++|+++.++++.++.|+.+.||+|++|+||.++||+.....
T Consensus       116 ~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~  195 (258)
T PRK12429        116 AFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQI  195 (258)
T ss_pred             hHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhh
Confidence            99999999999998888999999999999999999999999999999999999999999999999999999999765322


Q ss_pred             cCC------ccc------cccccccCCCCChHHhhhccceee
Q psy3252         336 KSK------PRE------TSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       336 ~~~------~~~------~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ...      +..      .....+.++...++|++++.+.++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  237 (258)
T PRK12429        196 PDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLA  237 (258)
T ss_pred             hhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHc
Confidence            111      000      001124567899999999855443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.97  E-value=9.7e-31  Score=263.89  Aligned_cols=226  Identities=21%  Similarity=0.202  Sum_probs=179.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++++++.+++....                        .++.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~------------------------~~~~~   57 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPK------------------------DSYTI   57 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCC------------------------CeEEE
Confidence            47899999999999999999999999 999999999988887776654211                        45778


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +.+|++ +.++++++++++.+.+++||+||||||+... ....+.+.++++.+                     +++|+.
T Consensus        58 ~~~Dl~-~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~---------------------~~vN~~  115 (314)
T TIGR01289        58 MHLDLG-SLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELS---------------------VGTNHL  115 (314)
T ss_pred             EEcCCC-CHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHH---------------------Hhhhhh
Confidence            999999 9999999999999889999999999998543 23345678888887                     999999


Q ss_pred             HHHHHHHHHHHHHHhCC--CCeEEEecccccccc---------------------------------CCCChhhHHHHHH
Q psy3252         255 GTIHMTKALVEGMKQRG--RGCIVITASQAANLG---------------------------------IYGLAAYTSSKFA  299 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~~~---------------------------------~~~~~~Y~aSKaA  299 (475)
                      |++++++.++|.|.+++  .|+||++||.++..+                                 ..+..+|++||+|
T Consensus       116 ~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a  195 (314)
T TIGR01289       116 GHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVC  195 (314)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHH
Confidence            99999999999998764  489999999876421                                 1234679999999


Q ss_pred             HHHHHHHHHHHHc-cCCcEEEEEeCCCC-CCCCCcccccCCcccccc--ccccCCCCChHHhhhccceeeecC
Q psy3252         300 LKGFAEALYMEVK-QSGLTITLCLPPDT-DTPGFENEEKSKPRETSL--ISQTGGLYRPEVVKQSGLTITLCL  368 (475)
Q Consensus       300 l~~l~~sLa~El~-~~gIrVn~V~PG~v-~T~~~~~~~~~~~~~~~~--~~~~~~~~~pe~va~~~~~~~~~~  368 (475)
                      +..+++.|++++. +.||+|++|+||.| .|++..+...........  ....++..+||+.++..+.++...
T Consensus       196 ~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       196 NMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCc
Confidence            9999999999995 47999999999999 699865422110000000  111245678999998877766543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-30  Score=262.18  Aligned_cols=197  Identities=23%  Similarity=0.274  Sum_probs=167.6

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+.                      .
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~----------------------~   67 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPG----------------------A   67 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC----------------------C
Confidence            345678999999999999999999999999999999999998888777777654321                      4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.++++++|+||||||+....  .+.+.++++..                     +++
T Consensus        68 ~~~~~~~Dl~-d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~---------------------~~v  123 (306)
T PRK06197         68 DVTLQELDLT-SLASVRAAADALRAAYPRIDLLINNAGVMYTP--KQTTADGFELQ---------------------FGT  123 (306)
T ss_pred             ceEEEECCCC-CHHHHHHHHHHHHhhCCCCCEEEECCccccCC--CccCCCCcchh---------------------hhh
Confidence            5788999999 99999999999999999999999999986432  23455566655                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-------------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANL-------------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                      |+.|++.+++.++|.|++.+.++||++||.++..             +.++...|++||+|+++|++.|+.++++.||+|
T Consensus       124 N~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v  203 (306)
T PRK06197        124 NHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATT  203 (306)
T ss_pred             hhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCe
Confidence            9999999999999999987778999999987543             234467899999999999999999999999887


Q ss_pred             EEE--eCCCCCCCCCccc
Q psy3252         319 TLC--LPPDTDTPGFENE  334 (475)
Q Consensus       319 n~V--~PG~v~T~~~~~~  334 (475)
                      +++  +||+|+|++..+.
T Consensus       204 ~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        204 IAVAAHPGVSNTELARNL  221 (306)
T ss_pred             EEEEeCCCcccCcccccC
Confidence            766  6999999987643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=3.4e-30  Score=250.33  Aligned_cols=219  Identities=32%  Similarity=0.369  Sum_probs=180.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH--HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK--LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+.+|+++||||++|||+++|+.|+++|++|+++.++.+.  .+.+.+... ...                +      ..
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~----------------~------~~   58 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAG----------------G------GR   58 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcC----------------C------Cc
Confidence            4678999999999999999999999999999988887654  333333332 110                0      25


Q ss_pred             EEEEEeecCCC-HHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         173 IEYVSLDISKD-YENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       173 v~~~~~Dvt~d-~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      +.+..+|++ + .++++.+++.+.+.+|++|+||||||+... .++.+.+.++++.+                     ++
T Consensus        59 ~~~~~~Dvs-~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~---------------------~~  116 (251)
T COG1028          59 AAAVAADVS-DDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRV---------------------ID  116 (251)
T ss_pred             EEEEEecCC-CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHH---------------------HH
Confidence            778889999 8 999999999999999999999999999877 48889999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC-hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL-AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~-~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|++.+++.+.|.|+++   +||++||..+. +.++. .+|++||+|+.+|+++|+.|+.++||+||+|+||.+.|+
T Consensus       117 ~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         117 VNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             HhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence            99999999999888888843   99999999999 87774 999999999999999999999999999999999999999


Q ss_pred             CCcccccCC---ccccccccccCCCCChHHhhhccc
Q psy3252         330 GFENEEKSK---PRETSLISQTGGLYRPEVVKQSGL  362 (475)
Q Consensus       330 ~~~~~~~~~---~~~~~~~~~~~~~~~pe~va~~~~  362 (475)
                      +........   ........+.++...|+++++...
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (251)
T COG1028         193 MTAALESAELEALKRLAARIPLGRLGTPEEVAAAVA  228 (251)
T ss_pred             chhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            887544332   000000014457888888887655

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-30  Score=250.04  Aligned_cols=202  Identities=18%  Similarity=0.225  Sum_probs=164.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||++|||+++|+.|+++|++|++++|+.++++++.+++                             .+.++.+|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----------------------------~~~~~~~D   52 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----------------------------DVDAIVCD   52 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----------------------------cCcEEecC
Confidence            4899999999999999999999999999999988776655432                             13467899


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccC------CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC------GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++ +.++++++++++.+   ++|+||||||....      ..+.+ +.++|+++                     +++|+
T Consensus        53 ~~-~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~---------------------~~~N~  106 (223)
T PRK05884         53 NT-DPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNA---------------------LDATV  106 (223)
T ss_pred             CC-CHHHHHHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHH---------------------HHHHH
Confidence            99 99999999887753   69999999986321      12333 45677777                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .++++++++++|.|.+  .|+||++||.+    .++...|++||+|+.+|+++|+.|++++||+||+|+||+++|+++..
T Consensus       107 ~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~  180 (223)
T PRK05884        107 LSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG  180 (223)
T ss_pred             HHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh
Confidence            9999999999999974  48999999976    35568999999999999999999999999999999999999997542


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..         ..|   ..+|||++++..  |++++...+++|
T Consensus       181 ~~---------~~p---~~~~~~ia~~~~--~l~s~~~~~v~G  209 (223)
T PRK05884        181 LS---------RTP---PPVAAEIARLAL--FLTTPAARHITG  209 (223)
T ss_pred             cc---------CCC---CCCHHHHHHHHH--HHcCchhhccCC
Confidence            21         112   238999988754  467777777776

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.97  E-value=4.2e-30  Score=249.93  Aligned_cols=217  Identities=23%  Similarity=0.311  Sum_probs=180.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||++|||.++|+.|+++|++|++++|+.++++++.+.+.                           .++.++.+|
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~~~~~~D   54 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---------------------------DNLYIAQLD   54 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------------------------cceEEEEec
Confidence            68999999999999999999999999999999887766554431                           357789999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      ++ +.++++++++++.+.++++|++|||||... ..+..+.+.++++.+                     +++|+.|++.
T Consensus        55 l~-~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~  112 (248)
T PRK10538         55 VR-NRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETM---------------------IDTNNKGLVY  112 (248)
T ss_pred             CC-CHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHH---------------------HHHhhHHHHH
Confidence            99 999999999999999999999999999763 345667788888887                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK  338 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~  338 (475)
                      +++.++|.|.+++.++||++||..+..+.++...|++||+++++|++.++.|+.++||+||+|+||.+.|+++.......
T Consensus       113 l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~  192 (248)
T PRK10538        113 MTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG  192 (248)
T ss_pred             HHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC
Confidence            99999999998888999999999998888889999999999999999999999999999999999999966543321111


Q ss_pred             cc-ccccccccCCCCChHHhhhccceee
Q psy3252         339 PR-ETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       339 ~~-~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .. .....-.......|||+|++.+.++
T Consensus       193 ~~~~~~~~~~~~~~~~~~dvA~~~~~l~  220 (248)
T PRK10538        193 DDGKAEKTYQNTVALTPEDVSEAVWWVA  220 (248)
T ss_pred             cHHHHHhhccccCCCCHHHHHHHHHHHh
Confidence            11 0000111224579999999866654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.97  E-value=2.8e-30  Score=284.72  Aligned_cols=241  Identities=22%  Similarity=0.265  Sum_probs=198.9

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |+....++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....+.                     
T Consensus       406 ~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~---------------------  464 (676)
T TIGR02632       406 MPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA---------------------  464 (676)
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC---------------------
Confidence            44456688999999999999999999999999999999999998888877776643321                     


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       ..+..+.+|++ |.+++.++++++.+.+|++|+||||||+....++.+.+.++|+..                     +
T Consensus       465 -~~~~~v~~Dvt-d~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~---------------------~  521 (676)
T TIGR02632       465 -GRAVALKMDVT-DEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLN---------------------L  521 (676)
T ss_pred             -CcEEEEECCCC-CHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHH---------------------H
Confidence             35678999999 999999999999999999999999999877677888888999887                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.+++.+++.+++.|.+++ .|+||++||..+..+.++..+|++||+|+++++++++.|++++||+||+|+||.|.|
T Consensus       522 ~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       522 DILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence            9999999999999999998765 579999999999999999999999999999999999999999999999999999975


Q ss_pred             --CCCcccccC---------C---ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 --PGFENEEKS---------K---PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 --~~~~~~~~~---------~---~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                        .++......         .   ........++++...||||+++.+.+  +......++|
T Consensus       602 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L--~s~~~~~~TG  661 (676)
T TIGR02632       602 GSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFL--ASSKSEKTTG  661 (676)
T ss_pred             CcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHH--hCCcccCCcC
Confidence              333221100         0   01122345778999999999986554  3333344444

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.6e-30  Score=253.06  Aligned_cols=225  Identities=24%  Similarity=0.290  Sum_probs=189.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++.+|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...+                        .++.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   62 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG------------------------GEAV   62 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CeEE
Confidence            3557899999999999999999999999999999999887777666655432                        4578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.+++.++++++.+.++++|++|||||........+.+.++++..                     +++|+.
T Consensus        63 ~~~~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  120 (274)
T PRK07775         63 AFPLDVT-DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQ---------------------VQIHLV  120 (274)
T ss_pred             EEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHH---------------------HHHhhH
Confidence            8899999 999999999999999999999999999876666777788888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |++++++.+++.|.+++.|+||++||..+..+.++...|++||+++++++++++.++.+.||+|++|+||+++|++....
T Consensus       121 ~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~  200 (274)
T PRK07775        121 GANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSL  200 (274)
T ss_pred             HHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccC
Confidence            99999999999998877899999999999888888899999999999999999999999999999999999999864432


Q ss_pred             ccCCc--ccc--cc--ccccCCCCChHHhhhccceee
Q psy3252         335 EKSKP--RET--SL--ISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       335 ~~~~~--~~~--~~--~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .....  ...  ..  ....++...|+|++++.+.+.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~  237 (274)
T PRK07775        201 PAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVA  237 (274)
T ss_pred             ChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHh
Confidence            11110  000  00  123356889999999986544

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.9e-30  Score=249.66  Aligned_cols=222  Identities=21%  Similarity=0.266  Sum_probs=186.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++++++||||++|||.++|+.|+++|++|+++ .|+.+++++..+++...+                        .++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~------------------------~~~   58 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNG------------------------GKA   58 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------CcE
Confidence            4678999999999999999999999999998774 788877777666664322                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhc------CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRC------GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~------g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                      +++.+|++ |.+++.++++++.+++      +++|++|||||......+.+.+.+.++.+                    
T Consensus        59 ~~~~~D~~-d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~--------------------  117 (254)
T PRK12746         59 FLIEADLN-SIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI--------------------  117 (254)
T ss_pred             EEEEcCcC-CHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHH--------------------
Confidence            88999999 9999999999999887      57999999999877777778888888887                    


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                       +++|+.+++++++.+++.|.+.  |+||++||..+..+.++...|++||+|++.++++++.++.++||+|++|+||+++
T Consensus       118 -~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~  194 (254)
T PRK12746        118 -MAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTK  194 (254)
T ss_pred             -HHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCcc
Confidence             9999999999999999998654  7999999999988899999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCccc--cccccccCCCCChHHhhhcccee
Q psy3252         328 TPGFENEEKSKPRE--TSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       328 T~~~~~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      |++...........  .......++...++||+++...+
T Consensus       195 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  233 (254)
T PRK12746        195 TDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFL  233 (254)
T ss_pred             CcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence            99865432211111  11123457788999999986543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.8e-30  Score=272.86  Aligned_cols=229  Identities=22%  Similarity=0.227  Sum_probs=191.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++||++|||||++|||+++|+.|+++|++|+++++..  +.++++.+++                             .
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----------------------------~  257 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----------------------------G  257 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----------------------------C
Confidence            45799999999999999999999999999999998843  3333322211                             1


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      ..++.+|++ +.++++++++.+.+.++++|+||||||+.....+.+.+.++++.+                     +++|
T Consensus       258 ~~~~~~Dv~-~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~---------------------~~~n  315 (450)
T PRK08261        258 GTALALDIT-APDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSV---------------------LAVN  315 (450)
T ss_pred             CeEEEEeCC-CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------HHHH
Confidence            246789999 999999999999999999999999999987778888899999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|++++++++++.+..++.++||++||.++..+.+++..|+++|+++++|+++++.|+.++||++|+|+||.++|++..
T Consensus       316 ~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~  395 (450)
T PRK08261        316 LLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA  395 (450)
T ss_pred             hHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh
Confidence            99999999999997665667999999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..............++.+.+.|+|++++..+  ++++...+++|
T Consensus       396 ~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~--l~s~~~~~itG  437 (450)
T PRK08261        396 AIPFATREAGRRMNSLQQGGLPVDVAETIAW--LASPASGGVTG  437 (450)
T ss_pred             ccchhHHHHHhhcCCcCCCCCHHHHHHHHHH--HhChhhcCCCC
Confidence            5432212222234567788999999998764  55666666665

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=6.8e-30  Score=246.75  Aligned_cols=226  Identities=28%  Similarity=0.339  Sum_probs=193.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++.+|++|||||++|||.++++.|+++|++|+++ +|+.++++++.+.+...+                        .++
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~------------------------~~~   57 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEG------------------------GDA   57 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------CeE
Confidence            4678999999999999999999999999999998 999888877777665422                        467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++++.+.++++|++|||||.....++.+.+.++++..                     +++|+
T Consensus        58 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  115 (247)
T PRK05565         58 IAVKADVS-SEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRV---------------------IDVNL  115 (247)
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------HHHhh
Confidence            88999999 999999999999999999999999999886667778888888887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++++++.+++.|.+++.++||++||..+..+.+....|+++|++++.++++++.++...||++++|+||.++|++...
T Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~  195 (247)
T PRK05565        116 TGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS  195 (247)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc
Confidence            99999999999999988889999999999998989999999999999999999999999999999999999999997654


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeee
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITL  366 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~  366 (475)
                      .............+.++...|++++++.+.+..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (247)
T PRK05565        196 FSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLAS  228 (247)
T ss_pred             cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            432211111112345677899999987655443

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7e-30  Score=248.64  Aligned_cols=220  Identities=22%  Similarity=0.242  Sum_probs=182.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|+++||||++|||.++|+.|+++|++|++++|+. +..++..+.+....                        .++.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~------------------------~~~~~~   57 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG------------------------VEVIFF   57 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcC------------------------CceEEE
Confidence            47999999999999999999999999999999864 44444444444322                        468889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC--CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      .+|++ +.+++.++++++.+.++++|++|||||....  .++.+.+.++++..                     +++|+.
T Consensus        58 ~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~---------------------~~~n~~  115 (256)
T PRK12745         58 PADVA-DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRV---------------------LAINLR  115 (256)
T ss_pred             EecCC-CHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHH---------------------HHhcch
Confidence            99999 9999999999999999999999999998532  45677788888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCC------CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         255 GTIHMTKALVEGMKQRG------RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~------~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++++++++++.|.++.      .++||++||..+..+.++.+.|++||+++++|+++++.|+.++||+|++|+||.+.|
T Consensus       116 ~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t  195 (256)
T PRK12745        116 GPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKT  195 (256)
T ss_pred             HHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcC
Confidence            99999999999998764      357999999999988889999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcccc-ccccccCCCCChHHhhhccce
Q psy3252         329 PGFENEEKSKPRET-SLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       329 ~~~~~~~~~~~~~~-~~~~~~~~~~~pe~va~~~~~  363 (475)
                      ++............ ....+.+++..|+|++++...
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~  231 (256)
T PRK12745        196 DMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAA  231 (256)
T ss_pred             ccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHH
Confidence            97654322111111 113467788999999997654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.1e-29  Score=246.39  Aligned_cols=228  Identities=23%  Similarity=0.282  Sum_probs=191.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.++++++.+++.+...                       .++.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-----------------------~~~~   65 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGG-----------------------PQPA   65 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCC-----------------------CCce
Confidence            45799999999999999999999999999999999999888887777765432                       3455


Q ss_pred             EEEeecCC-CHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         175 YVSLDISK-DYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       175 ~~~~Dvt~-d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      ++.+|++. +.+++.++++.+.+.++++|+||||||.... .++.+.+.++++..                     +++|
T Consensus        66 ~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~~n  124 (247)
T PRK08945         66 IIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDV---------------------MQVN  124 (247)
T ss_pred             EEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHH---------------------HHHc
Confidence            66777741 6889999999999999999999999998643 46667788888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|++++++++++.|.+++.++||++||..+..+.++...|++||++++.|+++++.++...||++++|+||.+.|++..
T Consensus       125 ~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~  204 (247)
T PRK08945        125 VNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA  204 (247)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh
Confidence            99999999999999998888999999999999998999999999999999999999999999999999999999999643


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......        ...++..||++++..+++  +.+....++|
T Consensus       205 ~~~~~~--------~~~~~~~~~~~~~~~~~~--~~~~~~~~~g  238 (247)
T PRK08945        205 SAFPGE--------DPQKLKTPEDIMPLYLYL--MGDDSRRKNG  238 (247)
T ss_pred             hhcCcc--------cccCCCCHHHHHHHHHHH--hCccccccCC
Confidence            322111        124678999999987764  4444444444

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.4e-30  Score=246.08  Aligned_cols=224  Identities=26%  Similarity=0.354  Sum_probs=186.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec----ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR----DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R----~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .++++++++||||++|||+++|+.|+++|++|++++|    +.+..+++.+++...+                       
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------   58 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAG-----------------------   58 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcC-----------------------
Confidence            3467899999999999999999999999999999765    4444555555554322                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ +.++++++++++.+.++++|++|||||.....++.+.+.++++..                     +
T Consensus        59 -~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~  115 (249)
T PRK12827         59 -GKALGLAFDVR-DFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDV---------------------I  115 (249)
T ss_pred             -CcEEEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------H
Confidence             46889999999 999999999999999999999999999987777888888888877                     9


Q ss_pred             hhhHHHHHHHHHHHH-HHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALV-EGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~l-p~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.+++++++++. +.|.+++.++||++||..+..+.++...|+++|++++.++++++.|+.+.||++++|+||+++|
T Consensus       116 ~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t  195 (249)
T PRK12827        116 DVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINT  195 (249)
T ss_pred             HHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCC
Confidence            999999999999999 6666666789999999999988899999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCccccccccccCCCCChHHhhhccceee
Q psy3252         329 PGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ++..+....  .......+.++...|+++++..+.++
T Consensus       196 ~~~~~~~~~--~~~~~~~~~~~~~~~~~va~~~~~l~  230 (249)
T PRK12827        196 PMADNAAPT--EHLLNPVPVQRLGEPDEVAALVAFLV  230 (249)
T ss_pred             CcccccchH--HHHHhhCCCcCCcCHHHHHHHHHHHc
Confidence            976543321  11111234556779999999755443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.2e-30  Score=252.49  Aligned_cols=186  Identities=27%  Similarity=0.428  Sum_probs=168.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .|++|||||+||||++++++|+++|++|++++|+.+.++++.+.+    +                       .++.++.
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~-----------------------~~~~~~~   54 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----G-----------------------DRLWVLQ   54 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c-----------------------CceEEEE
Confidence            478999999999999999999999999999999987766544322    1                       3577899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++++.+.++++|+||||||....++..+.+.++++..                     +++|+.+++
T Consensus        55 ~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~g~~  112 (276)
T PRK06482         55 LDVT-DSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQ---------------------IDTNLIGSI  112 (276)
T ss_pred             ccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 999999999999999999999999999987777777888888877                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +++++++|.|++++.++||++||..+..+.++.+.|++||+++++|+++++.++.++||+++.|+||.+.|++..
T Consensus       113 ~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~  187 (276)
T PRK06482        113 QVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGA  187 (276)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcc
Confidence            999999999998888999999999998888999999999999999999999999999999999999999998754

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=1.3e-29  Score=245.29  Aligned_cols=223  Identities=28%  Similarity=0.381  Sum_probs=192.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++|+++||||+++||.++++.|+++|++|++++|+.+++.+..+++...+                        .++.+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~~~   59 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG------------------------GKARA   59 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CeEEE
Confidence            568899999999999999999999999999999999888877777765443                        45788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.++++++|++|||||.....++.+.+.++++..                     +++|+.+
T Consensus        60 ~~~Dl~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~  117 (251)
T PRK12826         60 RQVDVR-DRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERV---------------------IDVNLTG  117 (251)
T ss_pred             EECCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhHH
Confidence            999999 999999999999999999999999999887777777888888877                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      ++.+++.+++.|.+++.++||++||..+. .+.++...|+++|++++.++++++.++.+.|++++.|+||.+.|++....
T Consensus       118 ~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~  197 (251)
T PRK12826        118 TFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL  197 (251)
T ss_pred             HHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc
Confidence            99999999999988878999999999888 78888899999999999999999999999999999999999999976544


Q ss_pred             ccCC-ccccccccccCCCCChHHhhhcccee
Q psy3252         335 EKSK-PRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       335 ~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      .... ........+.+++..++|++++...+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  228 (251)
T PRK12826        198 GDAQWAEAIAAAIPLGRLGEPEDIAAAVLFL  228 (251)
T ss_pred             CchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            3221 11111234667889999999887653

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=246.74  Aligned_cols=219  Identities=25%  Similarity=0.312  Sum_probs=185.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|+++||||++|||.++|++|+++|++|++++|+.++++.+.+++..                          .+++++.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~--------------------------~~~~~~~   55 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD--------------------------ARFVPVA   55 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--------------------------CceEEEE
Confidence            67999999999999999999999999999999998887776665521                          4578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.+++..+++++.++++++|++|||||.....++.+.+.+++...                     +++|+.+++
T Consensus        56 ~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  113 (257)
T PRK07074         56 CDLT-DAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRAD---------------------NALNLEAAY  113 (257)
T ss_pred             ecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhHHHH
Confidence            9999 999999999999999999999999999876667777888888877                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      .+++++++.|.+++.++||++||..+.. .++...|++||++++.++++++.|++++||+|++++||+++|++.......
T Consensus       114 ~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~  192 (257)
T PRK07074        114 LCVEAVLEGMLKRSRGAVVNIGSVNGMA-ALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAA  192 (257)
T ss_pred             HHHHHHHHHHHHcCCeEEEEEcchhhcC-CCCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhccccc
Confidence            9999999999888889999999987653 346679999999999999999999999999999999999999986543222


Q ss_pred             Ccccc---ccccccCCCCChHHhhhccceee
Q psy3252         338 KPRET---SLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       338 ~~~~~---~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .+...   ....+.+++..++|++++.+.++
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  223 (257)
T PRK07074        193 NPQVFEELKKWYPLQDFATPDDVANAVLFLA  223 (257)
T ss_pred             ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            22111   11335678899999998876654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.6e-29  Score=245.27  Aligned_cols=225  Identities=24%  Similarity=0.269  Sum_probs=185.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      |++++++++|||||++|||.+++++|+++|++|++..| +.+........+...+                        .
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~   56 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENG------------------------G   56 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcC------------------------C
Confidence            35677899999999999999999999999999988765 4444444444444332                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ +.+++.++++++.+.++++|++|||||.....++.+.+.++++..                     +++
T Consensus        57 ~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~  114 (252)
T PRK06077         57 EGIGVLADVS-TREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKH---------------------IST  114 (252)
T ss_pred             eeEEEEeccC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HhH
Confidence            5678899999 999999999999999999999999999877777777788888777                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.+++.+++++++.|.+.  |+||++||.++..+.++...|++||+++++++++++.|+++ ||+++.|.||.++|++.
T Consensus       115 n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~  191 (252)
T PRK06077        115 DFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLG  191 (252)
T ss_pred             hCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHH
Confidence            9999999999999999764  79999999999999999999999999999999999999988 99999999999999975


Q ss_pred             cccccCC----ccccccccccCCCCChHHhhhccceeee
Q psy3252         332 ENEEKSK----PRETSLISQTGGLYRPEVVKQSGLTITL  366 (475)
Q Consensus       332 ~~~~~~~----~~~~~~~~~~~~~~~pe~va~~~~~~~~  366 (475)
                      .......    ........+.++...|||++++.+.++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~  230 (252)
T PRK06077        192 ESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILK  230 (252)
T ss_pred             HhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhC
Confidence            4322111    1111122345678999999998776553

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=247.40  Aligned_cols=206  Identities=16%  Similarity=0.146  Sum_probs=157.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+.++||+++||||++|||+++|++|+++|++|++++|+.....+   .. ..                         ..
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~-------------------------~~   59 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE-------------------------SP   59 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc-------------------------CC
Confidence            356789999999999999999999999999999999998622111   00 00                         11


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      ..++.+|++ +.+++.+       .++++|+||||||+...   .+.+.++++.+                     +++|
T Consensus        60 ~~~~~~D~~-~~~~~~~-------~~~~iDilVnnAG~~~~---~~~~~~~~~~~---------------------~~vN  107 (245)
T PRK12367         60 NEWIKWECG-KEESLDK-------QLASLDVLILNHGINPG---GRQDPENINKA---------------------LEIN  107 (245)
T ss_pred             CeEEEeeCC-CHHHHHH-------hcCCCCEEEECCccCCc---CCCCHHHHHHH---------------------HHHH
Confidence            246789999 8876653       45789999999997532   34677888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhC---CCCeEEEeccccccccCCCChhhHHHHHHHHHHH---HHHHHHHccCCcEEEEEeCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQR---GRGCIVITASQAANLGIYGLAAYTSSKFALKGFA---EALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~---~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~---~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      +.|++++++.++|.|.++   +++.|++.||.++..+ ++.+.|++||+|+..+.   +.|+.|+.+.||+|++++||++
T Consensus       108 ~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~  186 (245)
T PRK12367        108 ALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPF  186 (245)
T ss_pred             hHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCc
Confidence            999999999999999863   2234545556665544 46678999999986543   4555566789999999999999


Q ss_pred             CCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHH
Q psy3252         327 DTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQ  406 (475)
Q Consensus       327 ~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~  406 (475)
                      +|++..                                                              ...++||+||+.
T Consensus       187 ~t~~~~--------------------------------------------------------------~~~~~~~~vA~~  204 (245)
T PRK12367        187 RSELNP--------------------------------------------------------------IGIMSADFVAKQ  204 (245)
T ss_pred             ccccCc--------------------------------------------------------------cCCCCHHHHHHH
Confidence            998410                                                              014689999999


Q ss_pred             HHHHHhcCCeeEEeCc
Q psy3252         407 LLEDALKGNYFSTVGL  422 (475)
Q Consensus       407 i~~ai~~g~~~~~~~~  422 (475)
                      +++++.+++..+++++
T Consensus       205 i~~~~~~~~~~~~~~~  220 (245)
T PRK12367        205 ILDQANLGLYLIIVTP  220 (245)
T ss_pred             HHHHHhcCCceEEEec
Confidence            9999999998766543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-29  Score=243.41  Aligned_cols=221  Identities=29%  Similarity=0.348  Sum_probs=181.8

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |+..+++++|+++||||++|||.++++.|+++|++|++++|+.++++++.+..                           
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---------------------------   53 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET---------------------------   53 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------------------------
Confidence            34456788999999999999999999999999999999999987765544321                           


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                        ...++.+|++ +.+++.++++.    ++++|++|||||.....+..+.+.++++..                     +
T Consensus        54 --~~~~~~~D~~-~~~~v~~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~  105 (245)
T PRK07060         54 --GCEPLRLDVG-DDAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRV---------------------M  105 (245)
T ss_pred             --CCeEEEecCC-CHHHHHHHHHH----hCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------H
Confidence              2346789999 88888877664    578999999999977677777888888877                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.+++.+++++++.+.+++ .|+||++||..+..+.++...|++||++++.++++++.++.+.||++++|+||.+.|
T Consensus       106 ~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~  185 (245)
T PRK07060        106 AVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLT  185 (245)
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCC
Confidence            9999999999999999998654 489999999999989899999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCc--cccccccccCCCCChHHhhhccceee
Q psy3252         329 PGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       329 ~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ++.........  .......+.+++..|+|++++.+.++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  224 (245)
T PRK07060        186 PMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLL  224 (245)
T ss_pred             chhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            97543221111  11111246678999999999875533

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.2e-29  Score=238.74  Aligned_cols=190  Identities=31%  Similarity=0.444  Sum_probs=170.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.+.+++++||||+|+||.+++++|+++|++|++++|+.++++++.+++.+.                         .++
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-------------------------~~~   56 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-------------------------GNV   56 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-------------------------CcE
Confidence            3466899999999999999999999999999999999998887777666432                         347


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +++.+|++ +.+++..+++++.+.++++|++|||||.....++.+.+.++++.+                     +++|+
T Consensus        57 ~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  114 (237)
T PRK07326         57 LGLAADVR-DEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLV---------------------IDTNL  114 (237)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHH---------------------Hhhcc
Confidence            78999999 999999999999999999999999999877677778888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      .+++.+++++++.| +++.|+||++||..+..+.++...|+++|+++.+++++++.|+...|+++++|+||++.|++.
T Consensus       115 ~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~  191 (237)
T PRK07326        115 TGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFN  191 (237)
T ss_pred             HHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccc
Confidence            99999999999999 445689999999998888888899999999999999999999999999999999999999854

>KOG1199|consensus

Probab=99.97  E-value=1.1e-31  Score=238.20  Aligned_cols=216  Identities=28%  Similarity=0.356  Sum_probs=185.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +.+|-+.+||||.+|+|++.|.+|+++|+.|++.+--.++.++.+.++.                           .++.
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg---------------------------~~~v   58 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG---------------------------GKVV   58 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC---------------------------CceE
Confidence            4567899999999999999999999999999999998888888877764                           6789


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC------cccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT------LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      +.++||+ ++++++.++...+.+||++|.+|||||+.....      -...+.|+++++                     
T Consensus        59 f~padvt-sekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrv---------------------  116 (260)
T KOG1199|consen   59 FTPADVT-SEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRV---------------------  116 (260)
T ss_pred             EeccccC-cHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhhe---------------------
Confidence            9999999 999999999999999999999999999875321      123456677666                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhC------CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~------~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      ++||+.|+|++++...-.|-++      .+|.|||+.|++++.+..++++|++||.++.+++--++++++..|||++.|.
T Consensus       117 idvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaaysaskgaivgmtlpiardla~~gir~~tia  196 (260)
T KOG1199|consen  117 IDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIA  196 (260)
T ss_pred             eeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhhhcccCceEeeechhhhhcccCceEEEeec
Confidence            9999999999999999999754      2589999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCcccccccccc-CCCCChHHhhh
Q psy3252         323 PPDTDTPGFENEEKSKPRETSLISQT-GGLYRPEVVKQ  359 (475)
Q Consensus       323 PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~  359 (475)
                      ||.++||+....++....-.....|. .|++.|.|.+.
T Consensus       197 pglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyah  234 (260)
T KOG1199|consen  197 PGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAH  234 (260)
T ss_pred             ccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHH
Confidence            99999999887765543322333343 68999988764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.4e-28  Score=237.06  Aligned_cols=226  Identities=23%  Similarity=0.285  Sum_probs=192.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +++.+|+++||||+||||+++|++|+++|+ +|++++|+.+++++       .+                        .+
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~------------------------~~   50 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LG------------------------PR   50 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cC------------------------Cc
Confidence            567889999999999999999999999999 99999999766543       11                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc-ccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ +.++++++++.    ++++|++|||||. ....++.+.+.++++..                     +++
T Consensus        51 ~~~~~~D~~-~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~  104 (238)
T PRK08264         51 VVPLQLDVT-DPASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAE---------------------MET  104 (238)
T ss_pred             eEEEEecCC-CHHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHH---------------------HHH
Confidence            788999999 98988877664    4789999999998 55567778888888877                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.+++.+++++++.|++.+.++||++||..+..+.++...|+++|++++.+++.++.++.++||+++++.||.++|++.
T Consensus       105 n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~  184 (238)
T PRK08264        105 NYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA  184 (238)
T ss_pred             HhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc
Confidence            99999999999999999888899999999999888889999999999999999999999999999999999999999853


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHH
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDA  411 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai  411 (475)
                      ....                                                           ....+++++|+.++..+
T Consensus       185 ~~~~-----------------------------------------------------------~~~~~~~~~a~~~~~~~  205 (238)
T PRK08264        185 AGLD-----------------------------------------------------------APKASPADVARQILDAL  205 (238)
T ss_pred             ccCC-----------------------------------------------------------cCCCCHHHHHHHHHHHH
Confidence            2110                                                           01468999999999999


Q ss_pred             hcCCeeEEeCchhHHHHHHhcCCcc
Q psy3252         412 LKGNYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       412 ~~g~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      ..++..+..+.....+..++ ...|
T Consensus       206 ~~~~~~i~~~~~~~~~~~~~-~~~~  229 (238)
T PRK08264        206 EAGDEEVLPDEMARQVKAAL-SADP  229 (238)
T ss_pred             hCCCCeEeccHHHHHHHHHh-hcCC
Confidence            99988877776666655544 4445

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=5.6e-29  Score=240.04  Aligned_cols=224  Identities=28%  Similarity=0.300  Sum_probs=188.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++|+++||||++|||.++++.|+++|++|+++.|+.. ..+...+++....                        .++
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~   57 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG------------------------GKA   57 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC------------------------Cce
Confidence            467899999999999999999999999999988887654 3455555554322                        467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++++.+.++++|++|||||.....+..+.+.++++..                     +++|+
T Consensus        58 ~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  115 (248)
T PRK05557         58 LAVQGDVS-DAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRV---------------------IDTNL  115 (248)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            88999999 999999999999999999999999999887777777788888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++.+++.+++.+.+.+.++||++||..+..+.++...|+++|++++.++++++.++...||++++|+||+++|++...
T Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~  195 (248)
T PRK05557        116 TGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA  195 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence            99999999999999887778999999998888888999999999999999999999999999999999999999997664


Q ss_pred             cccCCccccccccccCCCCChHHhhhcccee
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      .............+.++...|++++++...+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  226 (248)
T PRK05557        196 LPEDVKEAILAQIPLGRLGQPEEIASAVAFL  226 (248)
T ss_pred             cChHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            4222111111233567788999999986443

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1.3e-28  Score=239.70  Aligned_cols=242  Identities=26%  Similarity=0.376  Sum_probs=192.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .|+++||||+||||.++++.|+++|++|++++|+.++++.+.+                              ..+.++.
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~------------------------------~~~~~~~   51 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS------------------------------LGFTGIL   51 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh------------------------------CCCeEEE
Confidence            3689999999999999999999999999999999876654321                              1245789


Q ss_pred             eecCCCHHHHHHHHHHHHHhc-CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      +|++ |.+++..+++.+.+.. +++|++|||||.....++.+.+.++++..                     +++|+.|+
T Consensus        52 ~D~~-~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~g~  109 (256)
T PRK08017         52 LDLD-DPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQ---------------------FSTNFFGT  109 (256)
T ss_pred             eecC-CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHH---------------------HHHhhHHH
Confidence            9999 9999999999887644 68999999999876667778888888877                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      +++++.+++.|.+.+.++||++||..+..+.++...|++||++++.++++|+.++.++||++++|+||.+.|++......
T Consensus       110 ~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~  189 (256)
T PRK08017        110 HQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ  189 (256)
T ss_pred             HHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc
Confidence            99999999999988889999999999998999999999999999999999999999999999999999999986554321


Q ss_pred             CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCCe
Q psy3252         337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGNY  416 (475)
Q Consensus       337 ~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~  416 (475)
                      ......        ...                     ++.               .....++||++|+.++..+++++.
T Consensus       190 ~~~~~~--------~~~---------------------~~~---------------~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        190 TQSDKP--------VEN---------------------PGI---------------AARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             hhhccc--------hhh---------------------hHH---------------HhhcCCCHHHHHHHHHHHHhCCCC
Confidence            100000        000                     000               001257899999999999999886


Q ss_pred             eEEeC--chhHHHHHHhcCCcc
Q psy3252         417 FSTVG--LESYLITTLCAGFSP  436 (475)
Q Consensus       417 ~~~~~--~~~~~~~~~~~~~~P  436 (475)
                      .+.++  ....++. ++.+++|
T Consensus       226 ~~~~~~~~~~~~~~-~~~~~~p  246 (256)
T PRK08017        226 KLRYPVTLVTHAVM-VLKRLLP  246 (256)
T ss_pred             CceeecCcchHHHH-HHHHHCC
Confidence            65543  3333333 3456677

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=4.1e-29  Score=252.61  Aligned_cols=194  Identities=26%  Similarity=0.276  Sum_probs=163.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..+.+|+++||||++|||+++|++|+++|++|++++|+.++++++.+++....                        .++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~   57 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPP------------------------DSY   57 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccC------------------------Cce
Confidence            45678999999999999999999999999999999999988888777664211                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.+|++ |.++++++++++.+.++++|+||||||+... ....+.+.++++.+                     +++|
T Consensus        58 ~~~~~Dl~-~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~---------------------~~vN  115 (322)
T PRK07453         58 TIIHIDLG-DLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELS---------------------MATN  115 (322)
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHH---------------------HhHH
Confidence            88999999 9999999999988888899999999998643 23345678888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC--CeEEEecccccccc-----------------------------------CCCChhhHH
Q psy3252         253 LYGTIHMTKALVEGMKQRGR--GCIVITASQAANLG-----------------------------------IYGLAAYTS  295 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~--g~IV~iSS~a~~~~-----------------------------------~~~~~~Y~a  295 (475)
                      +.|+++++++++|.|++++.  ++||++||.....+                                   ..+..+|+.
T Consensus       116 ~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  195 (322)
T PRK07453        116 HLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKD  195 (322)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhH
Confidence            99999999999999988753  69999999764320                                   112468999


Q ss_pred             HHHHHHHHHHHHHHHHc-cCCcEEEEEeCCCC-CCCCCcc
Q psy3252         296 SKFALKGFAEALYMEVK-QSGLTITLCLPPDT-DTPGFEN  333 (475)
Q Consensus       296 SKaAl~~l~~sLa~El~-~~gIrVn~V~PG~v-~T~~~~~  333 (475)
                      ||.+...+++.|++++. .+||+|++|+||.| .|++..+
T Consensus       196 SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        196 SKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             hHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence            99999999999999995 47999999999999 5887543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=6.1e-29  Score=240.34  Aligned_cols=219  Identities=25%  Similarity=0.263  Sum_probs=182.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEE-EecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      |+++||||++|||.+++++|+++|++|++ ..|+.++.++...++...+                        .++..+.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~   57 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG------------------------GKAFVLQ   57 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCC------------------------CeEEEEE
Confidence            58999999999999999999999999987 5688777777776665432                        4578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      +|++ |.++++++++++.+.++++|++|||||.. ...++.+.+.++++..                     +++|+.++
T Consensus        58 ~D~~-d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  115 (247)
T PRK09730         58 ADIS-DENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRV---------------------LSTNVTGY  115 (247)
T ss_pred             ccCC-CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHH---------------------HhhhhHHH
Confidence            9999 99999999999999999999999999986 3356677888888887                     99999999


Q ss_pred             HHHHHHHHHHHHhCC---CCeEEEeccccccccCCC-ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         257 IHMTKALVEGMKQRG---RGCIVITASQAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~-~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.+++.+++.|.++.   .|+||++||..+..+.++ ...|+++|++++.++++++.|+.+.||++++|+||.++||+..
T Consensus       116 ~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        116 FLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence            999999999998753   578999999988888776 4689999999999999999999999999999999999999754


Q ss_pred             ccccCCc-cccccccccCCCCChHHhhhccce
Q psy3252         333 NEEKSKP-RETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       333 ~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      ....... .......++++...|+|++++.+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  227 (247)
T PRK09730        196 SGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVW  227 (247)
T ss_pred             cCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHh
Confidence            3221110 011112356677899999998754

>KOG1611|consensus

Probab=99.97  E-value=4.5e-29  Score=231.39  Aligned_cols=188  Identities=27%  Similarity=0.316  Sum_probs=152.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCEEE-EEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKR-GAHVT-IVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~-Ga~Vv-l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      |.++||||++|||+.++++|++. |-.++ .+.|+.++..+..+......                        .+++.+
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d------------------------~rvHii   59 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSD------------------------SRVHII   59 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccC------------------------CceEEE
Confidence            56999999999999999999976 45544 46677777522222111111                        689999


Q ss_pred             EeecCCCHHHHHHHHHHHHHh--cCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         177 SLDISKDYENIRSALQPAMDR--CGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~--~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++||+ +.+++..+++++.+-  ...+|+||||||+... ....+.+.+.|-.+                     ++||.
T Consensus        60 ~Ldvt-~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~---------------------~~tN~  117 (249)
T KOG1611|consen   60 QLDVT-CDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQ---------------------YETNA  117 (249)
T ss_pred             EEecc-cHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHH---------------------hhhcc
Confidence            99999 889999999999887  4589999999999865 44455556666666                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-----------CCeEEEecccccccc---CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         254 YGTIHMTKALVEGMKQRG-----------RGCIVITASQAANLG---IYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-----------~g~IV~iSS~a~~~~---~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                      .|+++++|+++|++++..           ++.|||+||..+..+   ..++.+|.+||+|+++|+|+++.||++.+|-|.
T Consensus       118 v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~  197 (249)
T KOG1611|consen  118 VGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVV  197 (249)
T ss_pred             hhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEE
Confidence            999999999999998753           248999999877643   234679999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCc
Q psy3252         320 LCLPPDTDTPGFE  332 (475)
Q Consensus       320 ~V~PG~v~T~~~~  332 (475)
                      .+|||+|+|+|-.
T Consensus       198 sihPGwV~TDMgg  210 (249)
T KOG1611|consen  198 SIHPGWVQTDMGG  210 (249)
T ss_pred             EecCCeEEcCCCC
Confidence            9999999999743

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.2e-29  Score=234.26  Aligned_cols=160  Identities=28%  Similarity=0.365  Sum_probs=145.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||++|||+++|+.|+++ ++|++++|+..                                         .+.+|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------------------------------~~~~D   39 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------------------------------DVQVD   39 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------------------------------ceEec
Confidence            6899999999999999999999 99999998742                                         25799


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ +.+++++++++    ++++|+||||||.....++.+.+.+++++.                     +++|+.+++++
T Consensus        40 ~~-~~~~~~~~~~~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~l   93 (199)
T PRK07578         40 IT-DPASIRALFEK----VGKVDAVVSAAGKVHFAPLAEMTDEDFNVG---------------------LQSKLMGQVNL   93 (199)
T ss_pred             CC-ChHHHHHHHHh----cCCCCEEEECCCCCCCCchhhCCHHHHHHH---------------------HHHHHHHHHHH
Confidence            99 99999888764    578999999999877777888888899887                     99999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++.++|.|.+.  |+||++||..+..+.++...|++||+|+++|+++|+.|+ ++||+||+|+||+++|++
T Consensus        94 ~~~~~~~~~~~--g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~  161 (199)
T PRK07578         94 VLIGQHYLNDG--GSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESL  161 (199)
T ss_pred             HHHHHHHHhcC--CeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCch
Confidence            99999999754  899999999999899999999999999999999999999 899999999999999985

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.4e-29  Score=239.14  Aligned_cols=210  Identities=27%  Similarity=0.358  Sum_probs=176.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.          .                         ....++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~----------~-------------------------~~~~~~   46 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------D-------------------------FPGELF   46 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc----------c-------------------------cCceEE
Confidence            57899999999999999999999999999999998642          0                         011367


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.++++++++++.+.+ ++|++|||||.....++.+.+.++++..                     +++|+.++
T Consensus        47 ~~D~~-~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  103 (234)
T PRK07577         47 ACDLA-DIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDV---------------------YDLNVRAA  103 (234)
T ss_pred             EeeCC-CHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHH---------------------HHHHhHHH
Confidence            89999 9999999999998876 6899999999987777777888888877                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      +.+++.++|.|++++.|+||++||.. ..+.++...|++||+++++|+++++.|++++||+|++|+||.+.|+++.....
T Consensus       104 ~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~  182 (234)
T PRK07577        104 VQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRP  182 (234)
T ss_pred             HHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccc
Confidence            99999999999988889999999985 45677889999999999999999999999999999999999999998764422


Q ss_pred             CCccc---cccccccCCCCChHHhhhccceee
Q psy3252         337 SKPRE---TSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       337 ~~~~~---~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ..+..   .....+.++...|+|++.+.+.++
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  214 (234)
T PRK07577        183 VGSEEEKRVLASIPMRRLGTPEEVAAAIAFLL  214 (234)
T ss_pred             cchhHHHHHhhcCCCCCCcCHHHHHHHHHHHh
Confidence            21111   111235677889999999876644

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=4.3e-29  Score=227.42  Aligned_cols=163  Identities=34%  Similarity=0.566  Sum_probs=151.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC--hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD--EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~--~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      |++|||||++|||+++|++|+++|+ +|++++|+  .+..+++.+++...+                        .++.+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~------------------------~~~~~   56 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG------------------------AKITF   56 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT------------------------SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc------------------------ccccc
Confidence            6899999999999999999999976 78889999  777888888887544                        67899


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +++|++ +.++++++++++.++++++|+||||||+....++.+.+.++++++                     |++|+.+
T Consensus        57 ~~~D~~-~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~  114 (167)
T PF00106_consen   57 IECDLS-DPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERV---------------------FRVNLFG  114 (167)
T ss_dssp             EESETT-SHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHH---------------------HHHHTHH
T ss_pred             cccccc-ccccccccccccccccccccccccccccccccccccccchhhhhc---------------------cccccce
Confidence            999999 999999999999999999999999999998889999999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHH
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEV  311 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El  311 (475)
                      ++++.++++|    ++.|+||++||.++..+.+++..|++||+|+++|+++|+.|+
T Consensus       115 ~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  115 PFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            9999999999    347999999999999999999999999999999999999997

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-28  Score=235.25  Aligned_cols=189  Identities=28%  Similarity=0.378  Sum_probs=169.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.+++|++|||||+++||.++++.|+++|++|++++|+.++..+..+++..                          ..+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------------------------~~~   56 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA--------------------------DAL   56 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh--------------------------cCc
Confidence            457799999999999999999999999999999999998777666555543                          224


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ..+.+|++ |.+++.++++++.+.++++|++|||||......+.+.+.++++..                     +++|+
T Consensus        57 ~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  114 (239)
T PRK12828         57 RIGGIDLV-DPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRM---------------------YGVNV  114 (239)
T ss_pred             eEEEeecC-CHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHH---------------------HHhhc
Confidence            56789999 999999999999999999999999999876666667788888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      .+++.+++++++.|.+++.++||++||..+..+.++...|+++|++++.++++++.++.+.||+++.|.||++.|++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~  191 (239)
T PRK12828        115 KTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP  191 (239)
T ss_pred             hhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence            99999999999999888889999999999988888899999999999999999999999999999999999999984

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=1.1e-28  Score=237.63  Aligned_cols=225  Identities=28%  Similarity=0.357  Sum_probs=192.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||+++||.++++.|+++|++|++++|+.++.+.+..++...+                        .++.
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   57 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG------------------------GEAR   57 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC------------------------CceE
Confidence            4567899999999999999999999999999999999988877777665433                        4678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.+++.++++++.+.++++|++|||||.....+..+.+.++++..                     +++|+.
T Consensus        58 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  115 (246)
T PRK05653         58 VLVFDVS-DEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRV---------------------IDVNLT  115 (246)
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------HHHhhH
Confidence            8999999 999999999999998999999999999877667777888888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +++++++.+++.|.+.+.++||++||..+..+..+...|+.+|++++.++++++.++.+.|+++++|+||.+.|++....
T Consensus       116 ~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~  195 (246)
T PRK05653        116 GTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL  195 (246)
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh
Confidence            99999999999998877789999999988888888899999999999999999999999999999999999999976542


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceee
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ............+.++...|+|+++....++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  226 (246)
T PRK05653        196 PEEVKAEILKEIPLGRLGQPEEVANAVAFLA  226 (246)
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            2211111222345577889999999876654

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-29  Score=244.06  Aligned_cols=219  Identities=24%  Similarity=0.324  Sum_probs=177.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      |+++||||++|||+++|++|+++|++|++++|+. +.++++.+    ...                       .+++++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~-----------------------~~~~~~~   54 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE----QYN-----------------------SNLTFHS   54 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh----ccC-----------------------CceEEEE
Confidence            6899999999999999999999999999999986 33332221    111                       4578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCC--cc--EEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         178 LDISKDYENIRSALQPAMDRCGP--VY--MLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~--ID--vLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +|++ +.++++++++++.+.++.  ++  ++|||||...+ .++.+.+.++++..                     +++|
T Consensus        55 ~D~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n  112 (251)
T PRK06924         55 LDLQ-DVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITN---------------------VHLN  112 (251)
T ss_pred             ecCC-CHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHH---------------------hccc
Confidence            9999 999999999999877653  22  89999998643 56778889999887                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhC-CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTDTP  329 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v~T~  329 (475)
                      +.+++.+++.++|.|.+. ..|+||++||..+..+.++...|+++|+|+++|++.|+.|++  +.||+|++|+||+++|+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~  192 (251)
T PRK06924        113 LLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN  192 (251)
T ss_pred             eehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence            999999999999999875 357999999999998999999999999999999999999985  57899999999999999


Q ss_pred             CCcccccCCccc------cccccccCCCCChHHhhhccceeee
Q psy3252         330 GFENEEKSKPRE------TSLISQTGGLYRPEVVKQSGLTITL  366 (475)
Q Consensus       330 ~~~~~~~~~~~~------~~~~~~~~~~~~pe~va~~~~~~~~  366 (475)
                      +...........      .....+.+++..|||++++.+.++.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  235 (251)
T PRK06924        193 MQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLE  235 (251)
T ss_pred             hHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHh
Confidence            865322111111      1112356789999999998776543

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.4e-29  Score=240.55  Aligned_cols=212  Identities=24%  Similarity=0.257  Sum_probs=174.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||++|||+++|++|+++|++|++++|+.+..  +    ....+                       .++.++.+|
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~-----------------------~~~~~~~~D   53 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAG-----------------------ERLAEVELD   53 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccC-----------------------CeEEEEEec
Confidence            799999999999999999999999999999986531  1    11111                       468889999


Q ss_pred             cCCCHHHHHHHHHH-HHHhc---CCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         180 ISKDYENIRSALQP-AMDRC---GPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       180 vt~d~~~v~~~~~~-i~~~~---g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++ +.+++++++++ +.+.+   +++|++|||||.... .++.+.+.++++..                     +++|+.
T Consensus        54 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n~~  111 (243)
T PRK07023         54 LS-DAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARA---------------------VGLNVA  111 (243)
T ss_pred             cC-CHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHH---------------------eeeeeh
Confidence            99 99999998877 55555   479999999998654 56677788888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |++.+++.+++.|.+++.|+||++||..+..+.++...|+++|+++++|++.++.+ .+.||++++|+||+++|++....
T Consensus       112 ~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~  190 (243)
T PRK07023        112 APLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATI  190 (243)
T ss_pred             HHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHH
Confidence            99999999999999877899999999999999999999999999999999999999 88899999999999999975432


Q ss_pred             ccCCc------cccccccccCCCCChHHhhhccce
Q psy3252         335 EKSKP------RETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       335 ~~~~~------~~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      .....      .......+.+++..|+++|+..+.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  225 (243)
T PRK07023        191 RATDEERFPMRERFRELKASGALSTPEDAARRLIA  225 (243)
T ss_pred             HhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHH
Confidence            11110      011223466889999999986544

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.2e-28  Score=234.64  Aligned_cols=225  Identities=27%  Similarity=0.373  Sum_probs=188.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|++|||||+|+||.+++++|+++|++|++..|+ ....+.+.+.+....                        .++
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~   58 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG------------------------RRA   58 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC------------------------Cce
Confidence            3567899999999999999999999999998876655 444444444444332                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++++.+.++.+|++|||||......+.+.+.++++..                     +++|+
T Consensus        59 ~~~~~D~~-~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  116 (249)
T PRK12825         59 QAVQADVT-DKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEV---------------------IDVNL  116 (249)
T ss_pred             EEEECCcC-CHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHH---------------------HHHhh
Confidence            88999999 999999999999998999999999999877777777888888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .+++++++.+++.+.+.+.+++|++||..+..+.++...|+.+|++++++++.++.++.+.||+++.|+||.+.|++...
T Consensus       117 ~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~  196 (249)
T PRK12825        117 SGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA  196 (249)
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc
Confidence            99999999999999888888999999999988888899999999999999999999999999999999999999998765


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceee
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .............+.++...++|+++....++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  228 (249)
T PRK12825        197 TIEEAREAKDAETPLGRSGTPEDIARAVAFLC  228 (249)
T ss_pred             ccchhHHhhhccCCCCCCcCHHHHHHHHHHHh
Confidence            43322211111346777899999999876554

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.5e-28  Score=236.82  Aligned_cols=183  Identities=26%  Similarity=0.368  Sum_probs=163.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||+||||++++++|+++|++|++++|+.+.++++.+.+...+                        ..+.++.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~~   57 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRG------------------------LALRVEK   57 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcceEEE
Confidence            6799999999999999999999999999999999887776665544332                        3477889


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++      +++|+||||||.....++.+.+.++++..                     +++|+.+++
T Consensus        58 ~D~~-~~~~~~~~~~------~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  109 (257)
T PRK09291         58 LDLT-DAIDRAQAAE------WDVDVLLNNAGIGEAGAVVDIPVELVREL---------------------FETNVFGPL  109 (257)
T ss_pred             eeCC-CHHHHHHHhc------CCCCEEEECCCcCCCcCcccCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 8888777643      38999999999987788888899999887                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++.+++.|.+.+.|+||++||..+..+.++...|++||+++++++++++.++.+.||++++|+||++.|++..
T Consensus       110 ~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        110 ELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            999999999998878999999999998888889999999999999999999999999999999999999998644

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.6e-28  Score=238.08  Aligned_cols=218  Identities=21%  Similarity=0.172  Sum_probs=171.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|+++||||++|||.++++.|+++|++|++++|+.+ .++.+.+++...+                        .++
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~------------------------~~~   58 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAG------------------------GRA   58 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcC------------------------Cce
Confidence            467899999999999999999999999999999999753 4555555554422                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++++.+.++.+|++|||||.....   +.+   ++..                     +++|+
T Consensus        59 ~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~---~~~---~~~~---------------------~~vn~  110 (248)
T PRK07806         59 SAVGADLT-DEESVAALMDTAREEFGGLDALVLNASGGMES---GMD---EDYA---------------------MRLNR  110 (248)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHhCCCCcEEEECCCCCCCC---CCC---ccee---------------------eEeee
Confidence            78999999 99999999999999999999999999864221   111   1222                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccc-----ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAAN-----LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-----~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      .|++++++.+.|.|.+  .|+||++||..+.     .+.+.+..|++||++++.++++++.|+++.||+||+|+||.+.|
T Consensus       111 ~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~  188 (248)
T PRK07806        111 DAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEG  188 (248)
T ss_pred             HHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccC
Confidence            9999999999999864  3799999996553     23355678999999999999999999999999999999999999


Q ss_pred             CCCcccccC-Ccc-ccccccccCCCCChHHhhhccceeee
Q psy3252         329 PGFENEEKS-KPR-ETSLISQTGGLYRPEVVKQSGLTITL  366 (475)
Q Consensus       329 ~~~~~~~~~-~~~-~~~~~~~~~~~~~pe~va~~~~~~~~  366 (475)
                      ++....... .+. ......+.++++.|+|++++.+.+..
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  228 (248)
T PRK07806        189 TVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVT  228 (248)
T ss_pred             chhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhh
Confidence            865432211 111 11223467899999999998766554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.96  E-value=4.6e-28  Score=235.33  Aligned_cols=223  Identities=26%  Similarity=0.332  Sum_probs=187.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||+++||.++++.|+++|++|++++|+.+..+++.+++....                        .++.++.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~~   56 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAG------------------------GSVIYLV   56 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CceEEEE
Confidence            4789999999999999999999999999999999888877776665432                        4588899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.+++.++++++.+.++++|++|||||........+.+.++++.+                     +++|+.|++
T Consensus        57 ~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~---------------------~~~n~~g~~  114 (255)
T TIGR01963        57 ADVT-KEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRI---------------------IAIMLTSAF  114 (255)
T ss_pred             CCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 999999999999999999999999999876666667788888877                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      .+++.+++.|.+.+.++||++||..+..+.++...|+++|++++.++++++.++.+.||+|+.|+||.+.|++.......
T Consensus       115 ~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~  194 (255)
T TIGR01963       115 HTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIAD  194 (255)
T ss_pred             HHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHh
Confidence            99999999998887889999999988888889999999999999999999999999999999999999999975432111


Q ss_pred             C------ccc------cccccccCCCCChHHhhhccceeee
Q psy3252         338 K------PRE------TSLISQTGGLYRPEVVKQSGLTITL  366 (475)
Q Consensus       338 ~------~~~------~~~~~~~~~~~~pe~va~~~~~~~~  366 (475)
                      .      ...      .....+.+....++|++++.+.++.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~  235 (255)
T TIGR01963       195 QAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLAS  235 (255)
T ss_pred             hhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcC
Confidence            0      000      0011234568899999998766553

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.96  E-value=2.2e-28  Score=235.48  Aligned_cols=176  Identities=23%  Similarity=0.322  Sum_probs=144.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++++||||++|||+++|++|+++|  ..|++..|+....      ..  .                        .++.++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~~--~------------------------~~~~~~   48 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------FQ--H------------------------DNVQWH   48 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------cc--c------------------------CceEEE
Confidence            379999999999999999999986  5666666654210      00  0                        457889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC------CCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC------GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++|++ +.++++++    .+.++++|+||||||+...      ..+.+.+.+.++..                     ++
T Consensus        49 ~~Dls-~~~~~~~~----~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~  102 (235)
T PRK09009         49 ALDVT-DEAEIKQL----SEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQN---------------------IT  102 (235)
T ss_pred             EecCC-CHHHHHHH----HHhcCCCCEEEECCccccccccCcccccccCCHHHHHHH---------------------HH
Confidence            99999 88888774    4556899999999998742      34566677777776                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc---cCCCChhhHHHHHHHHHHHHHHHHHHcc--CCcEEEEEeCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANL---GIYGLAAYTSSKFALKGFAEALYMEVKQ--SGLTITLCLPPD  325 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~---~~~~~~~Y~aSKaAl~~l~~sLa~El~~--~gIrVn~V~PG~  325 (475)
                      +|+.+++.+++.++|.|.+++.++|+++||..+..   +.+++..|++||+|+++|+++|+.|+.+  .||+||+|+||.
T Consensus       103 vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~  182 (235)
T PRK09009        103 LNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGT  182 (235)
T ss_pred             HHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccc
Confidence            99999999999999999887778999999876543   3456779999999999999999999987  699999999999


Q ss_pred             CCCCCCc
Q psy3252         326 TDTPGFE  332 (475)
Q Consensus       326 v~T~~~~  332 (475)
                      |+|++..
T Consensus       183 v~t~~~~  189 (235)
T PRK09009        183 TDTALSK  189 (235)
T ss_pred             eecCCCc
Confidence            9999754

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-28  Score=234.27  Aligned_cols=207  Identities=22%  Similarity=0.273  Sum_probs=171.1

Q ss_pred             EEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeecC
Q psy3252         102 SVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDIS  181 (475)
Q Consensus       102 LITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dvt  181 (475)
                      |||||++|||++++++|+++|++|++++|+.+++++..+++.. +                        .+++++.+|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~------------------------~~~~~~~~Dl~   55 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-G------------------------APVRTAALDIT   55 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-C------------------------CceEEEEccCC
Confidence            5999999999999999999999999999998877776655532 1                        45788999999


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHH
Q psy3252         182 KDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTK  261 (475)
Q Consensus       182 ~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~  261 (475)
                       +.+++.+++++    ++++|+||||||.....++.+.+.++++.+                     +++|+.+++++++
T Consensus        56 -~~~~~~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~l~~  109 (230)
T PRK07041         56 -DEAAVDAFFAE----AGPFDHVVITAADTPGGPVRALPLAAAQAA---------------------MDSKFWGAYRVAR  109 (230)
T ss_pred             -CHHHHHHHHHh----cCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHHHHHHHHHh
Confidence             99999888765    478999999999877777778888888887                     9999999999999


Q ss_pred             HHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCCcc-
Q psy3252         262 ALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR-  340 (475)
Q Consensus       262 ~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~-  340 (475)
                        ++.|.  +.|+||++||.++..+.++.+.|++||+++++|+++++.|+.+  |+||+|+||+++|+++......... 
T Consensus       110 --~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~  183 (230)
T PRK07041        110 --AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREA  183 (230)
T ss_pred             --hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHH
Confidence              44443  4589999999999999999999999999999999999999976  9999999999999986543221111 


Q ss_pred             ---ccccccccCCCCChHHhhhccceee
Q psy3252         341 ---ETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       341 ---~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                         ......+.++...|||++++.+.++
T Consensus       184 ~~~~~~~~~~~~~~~~~~dva~~~~~l~  211 (230)
T PRK07041        184 MFAAAAERLPARRVGQPEDVANAILFLA  211 (230)
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence               1111235678899999999876644

>PRK09135 pteridine reductase; Provisional

Probab=99.96  E-value=1.2e-27  Score=231.28  Aligned_cols=224  Identities=18%  Similarity=0.198  Sum_probs=181.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++++++|||||++|||++++++|+++|++|++++|+ .+.++.....+....+                       ..+
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-----------------------~~~   59 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRP-----------------------GSA   59 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-----------------------Cce
Confidence            3567899999999999999999999999999999986 4445555555543221                       357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++..+++++.+.++++|++|||||.....++.+.+.++++.+                     +++|+
T Consensus        60 ~~~~~Dl~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  117 (249)
T PRK09135         60 AALQADLL-DPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDL---------------------FASNL  117 (249)
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhc
Confidence            78999999 999999999999999999999999999876666667777788877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|++++++++.+.|.++ .|.+++++|..+..+.++...|++||++++.++++++.++.+ +|++++|+||++.||+...
T Consensus       118 ~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~  195 (249)
T PRK09135        118 KAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGN  195 (249)
T ss_pred             hhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccc
Confidence            99999999999998764 478999998887778888899999999999999999999966 6999999999999997543


Q ss_pred             cccCCc-cccccccccCCCCChHHhhhccceee
Q psy3252         334 EEKSKP-RETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       334 ~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ...... .......+.++.+.++|++++...+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~  228 (249)
T PRK09135        196 SFDEEARQAILARTPLKRIGTPEDIAEAVRFLL  228 (249)
T ss_pred             cCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHc
Confidence            111100 01111234567788999999865443

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.1e-28  Score=235.40  Aligned_cols=223  Identities=26%  Similarity=0.391  Sum_probs=185.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++..                          .++
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------------------------~~~   60 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG--------------------------AKV   60 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------------------------Cce
Confidence            346789999999999999999999999999999999998776665544321                          246


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.+|++ +++++..+++++.+.++++|+||||||.. ......+.+.++++.+                     +++|
T Consensus        61 ~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~---------------------~~~n  118 (264)
T PRK12829         61 TATVADVA-DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQT---------------------LAVN  118 (264)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            78999999 99999999999999999999999999987 4456667788888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-CeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGR-GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~-g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.+++++++.+++.|...+. +.||++||.++..+.++...|+++|++++.+++.++.++...+|++++|.||++.|++.
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        119 LNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence            99999999999999887766 78999999998888888999999999999999999999999999999999999999976


Q ss_pred             cccccC------Cc-----cccccccccCCCCChHHhhhcccee
Q psy3252         332 ENEEKS------KP-----RETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       332 ~~~~~~------~~-----~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      ......      ..     .......+.+++..+|+++++...+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  242 (264)
T PRK12829        199 RRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFL  242 (264)
T ss_pred             HHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            433211      00     0001112456789999999986443

>PRK08324 short chain dehydrogenase; Validated

Probab=99.96  E-value=1e-27  Score=265.32  Aligned_cols=224  Identities=25%  Similarity=0.262  Sum_probs=193.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      -.+.||++|||||+||||+++|+.|+++|++|++++|+.+.++.+.+++...                         ..+
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-------------------------~~v  472 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-------------------------DRA  472 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-------------------------CcE
Confidence            4567999999999999999999999999999999999998887776665432                         257


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++++++.+.+|++|++|||||+....++.+.+.++++..                     +++|+
T Consensus       473 ~~v~~Dvt-d~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~---------------------~~~N~  530 (681)
T PRK08324        473 LGVACDVT-DEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRS---------------------FDVNA  530 (681)
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHh
Confidence            88999999 999999999999999999999999999988888888899999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-CeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC--CCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGR-GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT--DTPG  330 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~-g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v--~T~~  330 (475)
                      .|++.+++.+++.|++++. |+||++||..+..+.++...|++||+++++++++++.|++++||+||+|+||.|  .|++
T Consensus       531 ~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~  610 (681)
T PRK08324        531 TGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGI  610 (681)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcc
Confidence            9999999999999998764 899999999999999999999999999999999999999999999999999999  8887


Q ss_pred             CcccccC--------Ccc----ccccccccCCCCChHHhhhcccee
Q psy3252         331 FENEEKS--------KPR----ETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       331 ~~~~~~~--------~~~----~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      +......        ...    ......++++...|+|++++.+.+
T Consensus       611 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l  656 (681)
T PRK08324        611 WTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFL  656 (681)
T ss_pred             ccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHH
Confidence            6542110        000    122234667889999999987654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=1.8e-27  Score=228.78  Aligned_cols=219  Identities=28%  Similarity=0.358  Sum_probs=182.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +||||++++||.++|++|+++|++|++++|+. +.++...+.+...+                        .++.++.+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~------------------------~~~~~~~~D   56 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG------------------------VKALGVVCD   56 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC------------------------CceEEEEec
Confidence            58999999999999999999999999999875 45555555554332                        457889999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.++++++++.+.+.++++|++|||||......+.+.+.++++..                     +++|+.+++.+
T Consensus        57 ~~-~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~l  114 (239)
T TIGR01830        57 VS-DREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAV---------------------IDTNLTGVFNL  114 (239)
T ss_pred             CC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhHHHHHH
Confidence            99 999999999999999999999999999876666667778888877                     99999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCCc
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP  339 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~  339 (475)
                      ++.+++.+.+.+.+++|++||.++..+.++...|+++|++++.++++|+.++...|+++++++||.+.|++.........
T Consensus       115 ~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~  194 (239)
T TIGR01830       115 TQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVK  194 (239)
T ss_pred             HHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHH
Confidence            99999999877778999999999999999999999999999999999999999999999999999999986543221111


Q ss_pred             cccccccccCCCCChHHhhhccceee
Q psy3252         340 RETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       340 ~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .......+.++.+.++|+++..+.+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~a~~~~~~~  220 (239)
T TIGR01830       195 KKILSQIPLGRFGTPEEVANAVAFLA  220 (239)
T ss_pred             HHHHhcCCcCCCcCHHHHHHHHHHHh
Confidence            11112235677889999998875443

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-27  Score=227.49  Aligned_cols=178  Identities=21%  Similarity=0.244  Sum_probs=151.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+++||||++|||.++|++|+++|++|++++|+.+..+++.+    .                         .++.++.+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~-------------------------~~~~~~~~   52 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA----L-------------------------PGVHIEKL   52 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh----c-------------------------cccceEEc
Confidence            689999999999999999999999999999999776543321    1                         23557789


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC--CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      |++ |.++++++++.+.+  +++|++|||||+...  .++.+.+.++++..                     +++|+.++
T Consensus        53 D~~-d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  108 (225)
T PRK08177         53 DMN-DPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQL---------------------FLTNAIAP  108 (225)
T ss_pred             CCC-CHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhh---------------------eeeeeeHH
Confidence            999 99999999988854  589999999998643  35667778888877                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccC---CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGI---YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +.+++.+++.|.+. .++||++||..+..+.   .+...|+++|++++.|+++|+.|++++||+||+|+||+++|++
T Consensus       109 ~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        109 IRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             HHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            99999999998753 4899999998776543   3567899999999999999999999999999999999999996

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2e-26  Score=221.85  Aligned_cols=185  Identities=24%  Similarity=0.263  Sum_probs=159.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|+++||||++|||.++++.|+++|++|++++|+.++++++.+++...                         .+++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------------------~~~~   56 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-------------------------GNIH   56 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------------------CCeE
Confidence            467899999999999999999999999999999999988877665555432                         3477


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.+++.++++++...++++|.+|+|+|........+  .++++.+                     +++|+.
T Consensus        57 ~~~~Dl~-~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~--~~~~~~~---------------------~~~n~~  112 (238)
T PRK05786         57 YVVGDVS-STESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEE--FSGLEEM---------------------LTNHIK  112 (238)
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHH--HHHHHHH---------------------HHHhch
Confidence            8999999 999999999999888999999999999764433322  2666666                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccc-cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +++.+++.++|.|.+  .|+||++||..+.. +.+....|++||++++.++++++.++.+.||++++|+||+++|++
T Consensus       113 ~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~  187 (238)
T PRK05786        113 IPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF  187 (238)
T ss_pred             HHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence            999999999999865  38899999987743 566778899999999999999999999999999999999999985

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=2.8e-26  Score=237.47  Aligned_cols=204  Identities=18%  Similarity=0.149  Sum_probs=158.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||+++||||+||||++++++|+++|++|++++|+.+++++..   ....                        ..
T Consensus       173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~------------------------~~  225 (406)
T PRK07424        173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGED------------------------LP  225 (406)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcC------------------------CC
Confidence            35678999999999999999999999999999999999876654321   1111                        23


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +..+.+|++ |.+++.+.       ++++|+||||||+...   .+.+.++++.+                     +++|
T Consensus       226 v~~v~~Dvs-d~~~v~~~-------l~~IDiLInnAGi~~~---~~~s~e~~~~~---------------------~~vN  273 (406)
T PRK07424        226 VKTLHWQVG-QEAALAEL-------LEKVDILIINHGINVH---GERTPEAINKS---------------------YEVN  273 (406)
T ss_pred             eEEEEeeCC-CHHHHHHH-------hCCCCEEEECCCcCCC---CCCCHHHHHHH---------------------HHHH
Confidence            567899999 88776554       3589999999997643   35677888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC----CeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGR----GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~----g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +.|++.++++++|.|++++.    +.||++|| ++ ...+..+.|++||+|+.+|+. ++.+.  .++.|..++||+++|
T Consensus       274 v~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t  348 (406)
T PRK07424        274 TFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKS  348 (406)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcC
Confidence            99999999999999987642    35666665 33 333456789999999999984 54443  457777889999988


Q ss_pred             CCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHH
Q psy3252         329 PGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLL  408 (475)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~  408 (475)
                      ++..                                                              .+.++||+||+.++
T Consensus       349 ~~~~--------------------------------------------------------------~~~~spe~vA~~il  366 (406)
T PRK07424        349 NLNP--------------------------------------------------------------IGVMSADWVAKQIL  366 (406)
T ss_pred             CCCc--------------------------------------------------------------CCCCCHHHHHHHHH
Confidence            7310                                                              01478999999999


Q ss_pred             HHHhcCCeeEEeCc
Q psy3252         409 EDALKGNYFSTVGL  422 (475)
Q Consensus       409 ~ai~~g~~~~~~~~  422 (475)
                      .++++++..++++.
T Consensus       367 ~~i~~~~~~i~v~~  380 (406)
T PRK07424        367 KLAKRDFRNIIVTI  380 (406)
T ss_pred             HHHHCCCCEEEeCc
Confidence            99999999888875

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.1e-25  Score=213.21  Aligned_cols=176  Identities=22%  Similarity=0.210  Sum_probs=146.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+++||||++|||.+++++|+++|++|++++|+.+.++++.    .                          ..+.++.+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~--------------------------~~~~~~~~   51 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----A--------------------------LGAEALAL   51 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----h--------------------------ccceEEEe
Confidence            58999999999999999999999999999999977655432    1                          12457899


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      |++ +.++++++++++..  +++|++|||+|...  .....+.+.++++..                     +++|+.++
T Consensus        52 D~~-~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  107 (222)
T PRK06953         52 DVA-DPASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAV---------------------MHTNVLGP  107 (222)
T ss_pred             cCC-CHHHHHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHH---------------------HhhhhhhH
Confidence            999 99999988877642  47999999999863  244556788888887                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCC---hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGL---AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~---~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.++++++|.|.+ ..|+||++||..+..+....   ..|+++|++++++++.++.++  .+++||+|+||+++|++.
T Consensus       108 ~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~  182 (222)
T PRK06953        108 MQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQA--RHATCIALHPGWVRTDMG  182 (222)
T ss_pred             HHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCC
Confidence            9999999998865 35899999998876664333   259999999999999999986  369999999999999963

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5e-25  Score=210.21  Aligned_cols=177  Identities=28%  Similarity=0.379  Sum_probs=153.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||+|+||+++++.|+++ ++|++++|+.++++++.+++                            ..++++.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----------------------------~~~~~~~   53 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----------------------------PGATPFP   53 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----------------------------ccceEEe
Confidence            579999999999999999999999 99999999987665443321                            2356789


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.++++++++.    ++++|++|||||.....+..+.+.+++..+                     +++|+.+++
T Consensus        54 ~D~~-~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~  107 (227)
T PRK08219         54 VDLT-DPEAIAAAVEQ----LGRLDVLVHNAGVADLGPVAESTVDEWRAT---------------------LEVNVVAPA  107 (227)
T ss_pred             cCCC-CHHHHHHHHHh----cCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 98888887764    358999999999876666777888888877                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      .+++.+++.|.++ .++||++||..+..+.++...|+++|++++.+++.++.++... |++++|+||.+.|++.
T Consensus       108 ~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~  179 (227)
T PRK08219        108 ELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQ  179 (227)
T ss_pred             HHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHh
Confidence            9999999998875 4799999999998888889999999999999999999998877 9999999999998843

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.93  E-value=2.3e-25  Score=216.13  Aligned_cols=191  Identities=23%  Similarity=0.196  Sum_probs=150.4

Q ss_pred             HHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHH
Q psy3252         114 VAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQP  193 (475)
Q Consensus       114 iA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~  193 (475)
                      +|++|+++|++|++++|+.++++     +                              ..++++|++ |.+++++++++
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~------------------------------~~~~~~Dl~-~~~~v~~~~~~   44 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L------------------------------DGFIQADLG-DPASIDAAVAA   44 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h------------------------------hHhhcccCC-CHHHHHHHHHH
Confidence            47899999999999999876531     0                              124689999 99999999887


Q ss_pred             HHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCC
Q psy3252         194 AMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG  273 (475)
Q Consensus       194 i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g  273 (475)
                      +.   +++|+||||||+...        ++++.+                     +++|+.+++.+++.++|.|.+  .|
T Consensus        45 ~~---~~iD~li~nAG~~~~--------~~~~~~---------------------~~vN~~~~~~l~~~~~~~~~~--~g   90 (241)
T PRK12428         45 LP---GRIDALFNIAGVPGT--------APVELV---------------------ARVNFLGLRHLTEALLPRMAP--GG   90 (241)
T ss_pred             hc---CCCeEEEECCCCCCC--------CCHHHh---------------------hhhchHHHHHHHHHHHHhccC--Cc
Confidence            74   689999999997521        234555                     999999999999999999964  38


Q ss_pred             eEEEeccccccc---------------------------cCCCChhhHHHHHHHHHHHHHHH-HHHccCCcEEEEEeCCC
Q psy3252         274 CIVITASQAANL---------------------------GIYGLAAYTSSKFALKGFAEALY-MEVKQSGLTITLCLPPD  325 (475)
Q Consensus       274 ~IV~iSS~a~~~---------------------------~~~~~~~Y~aSKaAl~~l~~sLa-~El~~~gIrVn~V~PG~  325 (475)
                      +||++||.++..                           +.++...|++||+|+++|+++++ .|++++||+||+|+||.
T Consensus        91 ~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~  170 (241)
T PRK12428         91 AIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGP  170 (241)
T ss_pred             EEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCC
Confidence            999999998862                           55677899999999999999999 99999999999999999


Q ss_pred             CCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         326 TDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       326 v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+|+|..+......  .......+++|+.+|||+|++.+.  ++++....++|
T Consensus       171 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~--l~s~~~~~~~G  221 (241)
T PRK12428        171 VFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVF--LCSDAARWING  221 (241)
T ss_pred             ccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHH--HcChhhcCccC
Confidence            99998765322111  111223578899999999998766  34544444444

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.93  E-value=1.6e-24  Score=201.41  Aligned_cols=232  Identities=16%  Similarity=0.140  Sum_probs=196.9

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          94 LAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        94 ~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ..|+||++||+|-.  +.|+..||+.|.++|+.++++..++ ++++-.+++.+..                        .
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~------------------------~   56 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL------------------------G   56 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc------------------------c
Confidence            46889999999986  7999999999999999999999886 6666666665543                        2


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc----CCCcccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL----CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                      .-..++|||+ +.++++++++++.+++|++|+|||+-|+..    .+.+.|.+-+.|...                    
T Consensus        57 s~~v~~cDV~-~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a--------------------  115 (259)
T COG0623          57 SDLVLPCDVT-NDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIA--------------------  115 (259)
T ss_pred             CCeEEecCCC-CHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhH--------------------
Confidence            2457899999 899999999999999999999999999885    367778888999877                    


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                       +++..++...+++++.|.|..  +|+||..+-..+....|++..-+.+|++|++-+|.||.+++++|||||.|+-|+|+
T Consensus       116 -~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIr  192 (259)
T COG0623         116 -MDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIR  192 (259)
T ss_pred             -hhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchH
Confidence             999999999999999999986  48999999988888899999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCC--ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         328 TPGFENEEKSK--PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       328 T~~~~~~~~~~--~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |=-........  -.......|++|-.++|||.++.  +||+++..+.++|
T Consensus       193 TLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA--~fLlSdLssgiTG  241 (259)
T COG0623         193 TLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTA--AFLLSDLSSGITG  241 (259)
T ss_pred             HHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhH--HHHhcchhccccc
Confidence            96333222111  12233456999999999999875  5788888888887

>KOG1204|consensus

Probab=99.92  E-value=7.8e-25  Score=203.28  Aligned_cols=231  Identities=21%  Similarity=0.158  Sum_probs=174.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+|++||||+|+|||..++..+.+++-.....+++....+  .+.+.-..                       +......
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~-----------------------gd~~v~~   59 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY-----------------------GDDFVHV   59 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe-----------------------cCCccee
Confidence            4678999999999999998888888765444443322221  00010000                       0223456


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCC---CcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG---TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ..|++ ...-+.++++...+++|..|++|||||...+.   ..+..+.++|++.                     +++|+
T Consensus        60 ~g~~~-e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky---------------------~~~Nl  117 (253)
T KOG1204|consen   60 VGDIT-EEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKY---------------------WDLNL  117 (253)
T ss_pred             chHHH-HHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHH---------------------HHhhh
Confidence            67888 77778888998999999999999999987652   2235677888888                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      ++++.+.+.++|.++++. .+.|||+||.++..|+.++++||+||+|.++|.+.||.|-. ++|+|.++.||.|+|+|-.
T Consensus       118 fS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~  196 (253)
T KOG1204|consen  118 FSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQV  196 (253)
T ss_pred             hhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHH
Confidence            999999999999999884 68999999999999999999999999999999999999955 8999999999999999866


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~  412 (475)
                      ...+..            -.+|+++...                            +.+...+.+.+|..-|+.+..-++
T Consensus       197 ~ir~~~------------~~~p~~l~~f----------------------------~el~~~~~ll~~~~~a~~l~~L~e  236 (253)
T KOG1204|consen  197 CIRETS------------RMTPADLKMF----------------------------KELKESGQLLDPQVTAKVLAKLLE  236 (253)
T ss_pred             HHhhcc------------CCCHHHHHHH----------------------------HHHHhcCCcCChhhHHHHHHHHHH
Confidence            543322            2445554421                            112223347888888888888777


Q ss_pred             cCC
Q psy3252         413 KGN  415 (475)
Q Consensus       413 ~g~  415 (475)
                      .+.
T Consensus       237 ~~~  239 (253)
T KOG1204|consen  237 KGD  239 (253)
T ss_pred             hcC
Confidence            663

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.91  E-value=3.3e-23  Score=250.77  Aligned_cols=205  Identities=19%  Similarity=0.199  Sum_probs=159.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCh--------------hHHHHH-HHHHHHhCCCCcc-------hh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDE--------------KKLLQA-QEEIKKACPNPKF-------IR  153 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~--------------~~l~~~-~~~l~~~~~~~~~-------~~  153 (475)
                      +|+++|||||++|||.++|++|+++ |++|++++|+.              ..++.. .+.+.+.+.....       ..
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982              112111 1111111111000       00


Q ss_pred             ---hhhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhh
Q psy3252         154 ---FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQP  230 (475)
Q Consensus       154 ---~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~  230 (475)
                         ...........  ...+.++.++.|||+ |.++++++++++.+. ++||+||||||+.....+.+.+.++|+++   
T Consensus      2076 ~~~~~ei~~~la~l--~~~G~~v~y~~~DVt-D~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v--- 2148 (2582)
T TIGR02813      2076 VLSSLEIAQALAAF--KAAGASAEYASADVT-NSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAV--- 2148 (2582)
T ss_pred             cchhHHHHHHHHHH--HhcCCcEEEEEccCC-CHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHH---
Confidence               00000000000  112257889999999 999999999999887 68999999999988888999999999988   


Q ss_pred             hhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHH
Q psy3252         231 LWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       231 ~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                                        |++|+.|++++++++.+.+.    ++||++||+++..+.++++.|+++|++++.|++.++.+
T Consensus      2149 ------------------~~~nv~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~ 2206 (2582)
T TIGR02813      2149 ------------------YGTKVDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKAL 2206 (2582)
T ss_pred             ------------------HHHHHHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence                              99999999999999876543    46999999999999999999999999999999999998


Q ss_pred             HccCCcEEEEEeCCCCCCCCCc
Q psy3252         311 VKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.  +++|++|+||.++|+|..
T Consensus      2207 ~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2207 NP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             cC--CcEEEEEECCeecCCccc
Confidence            74  499999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1478|consensus

Probab=99.90  E-value=2.5e-23  Score=195.29  Aligned_cols=217  Identities=18%  Similarity=0.170  Sum_probs=183.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-----EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-----HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-----~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .|+++|||+++|||++||.+|++...     +|++++|+.++.+++.+.|.+.+++..                    .+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~--------------------i~   62 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKST--------------------IE   62 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCce--------------------eE
Confidence            58999999999999999999998753     578899999999999999999987543                    67


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcc------cCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE------EMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                      +.++.+|++ +..++.++..++.++|.++|.+..|||+.....+.      ..=...+..+..+.+...-.+....+.+.
T Consensus        63 ~~yvlvD~s-Nm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg  141 (341)
T KOG1478|consen   63 VTYVLVDVS-NMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLG  141 (341)
T ss_pred             EEEEEEehh-hHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchh
Confidence            999999999 99999999999999999999999999987532211      11123344555555555556778888888


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc---------CCCChhhHHHHHHHHHHHHHHHHHHccCCcE
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG---------IYGLAAYTSSKFALKGFAEALYMEVKQSGLT  317 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~---------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIr  317 (475)
                      .+|+.|++|+|++++.+.|++..+....+|++||..+.-.         ..+..+|..||.+++-|.-++-+.+.+.|+.
T Consensus       142 ~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~  221 (341)
T KOG1478|consen  142 EIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGIN  221 (341)
T ss_pred             hHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchh
Confidence            9999999999999999999999888789999999887533         3456789999999999999999999999999


Q ss_pred             EEEEeCCCCCCCCCcccc
Q psy3252         318 ITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       318 Vn~V~PG~v~T~~~~~~~  335 (475)
                      -++|+||..-|.++....
T Consensus       222 qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  222 QYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             hhcccCceeecchhhhhh
Confidence            999999999999876543

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=2.7e-22  Score=182.25  Aligned_cols=175  Identities=25%  Similarity=0.297  Sum_probs=147.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH---HHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ---EEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      |+++||||++|||++++++|+++|+ .|++++|+.+..+...   +++...+                        .++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~------------------------~~~~   56 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALG------------------------AEVT   56 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcC------------------------CeEE
Confidence            5789999999999999999999997 6888888765443322   2332221                        4678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.++++++++++...++++|+||||||......+.+.+.++++.+                     +++|+.
T Consensus        57 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~  114 (180)
T smart00822       57 VVACDVA-DRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAV---------------------LAPKVD  114 (180)
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHh---------------------hchHhH
Confidence            8999999 999999999999998999999999999876666777888888877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++.+++.+.    +.+.++||++||..+..+.++...|+++|+++..+++.++    +.|+++.++.||++.
T Consensus       115 ~~~~l~~~~~----~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      115 GAWNLHELTR----DLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHhc----cCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHHHHHH----hcCCceEEEeecccc
Confidence            9999999873    3455899999999999999999999999999999887654    468999999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=2.6e-21  Score=196.04  Aligned_cols=168  Identities=20%  Similarity=0.232  Sum_probs=133.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++||++|||||+|+||.+++++|+++|  ++|++++|+......+...+..                          .++
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~--------------------------~~~   55 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA--------------------------PCL   55 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC--------------------------CcE
Confidence            368999999999999999999999987  6899999986654433222210                          357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++       .+|+||||||.... +..+.++   ...                     +++|+
T Consensus        56 ~~v~~Dl~-d~~~l~~~~~-------~iD~Vih~Ag~~~~-~~~~~~~---~~~---------------------~~~Nv  102 (324)
T TIGR03589        56 RFFIGDVR-DKERLTRALR-------GVDYVVHAAALKQV-PAAEYNP---FEC---------------------IRTNI  102 (324)
T ss_pred             EEEEccCC-CHHHHHHHHh-------cCCEEEECcccCCC-chhhcCH---HHH---------------------HHHHH
Confidence            78999999 9888877664       58999999997532 2222222   223                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      .|++++++++.+    .+.++||++||.....|   ...|++||++.+.++++++.++..+|++++++.||+|.+|
T Consensus       103 ~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       103 NGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             HHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            999999999875    34578999999765433   4679999999999999999888889999999999999997

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.86  E-value=3.5e-20  Score=196.82  Aligned_cols=214  Identities=15%  Similarity=0.161  Sum_probs=153.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      -...||++|||||+||||++++++|+++|++|++++|+.++++.+.+++.+......               ......++
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~---------------Ga~~~~~v  140 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVE---------------GTQPVEKL  140 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccc---------------cccccCce
Confidence            345689999999999999999999999999999999999888877666543210000               00000357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++.++       ++++|+||||+|....      ...++...                     +++|+
T Consensus       141 ~iV~gDLt-D~esI~~a-------LggiDiVVn~AG~~~~------~v~d~~~~---------------------~~VN~  185 (576)
T PLN03209        141 EIVECDLE-KPDQIGPA-------LGNASVVICCIGASEK------EVFDVTGP---------------------YRIDY  185 (576)
T ss_pred             EEEEecCC-CHHHHHHH-------hcCCCEEEEccccccc------cccchhhH---------------------HHHHH
Confidence            89999999 88877553       4689999999997531      11123333                     88999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+.++++++..    .+.++||++||.++. .+.+.. .|. +|+++..+.+.+..++...||++|+|+||++.|++..
T Consensus       186 ~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        186 LATKNLVDAATV----AKVNHFILVTSLGTNKVGFPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDA  259 (576)
T ss_pred             HHHHHHHHHHHH----hCCCEEEEEccchhcccCcccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccc
Confidence            999999988754    356899999998764 333322 344 8899999999999999999999999999999998543


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccce
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      ..............+.+|.+.++|||+..+.
T Consensus       260 ~~~t~~v~~~~~d~~~gr~isreDVA~vVvf  290 (576)
T PLN03209        260 YKETHNLTLSEEDTLFGGQVSNLQVAELMAC  290 (576)
T ss_pred             cccccceeeccccccCCCccCHHHHHHHHHH
Confidence            2111110000111356788999999987643

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.84  E-value=6.9e-20  Score=170.39  Aligned_cols=174  Identities=25%  Similarity=0.348  Sum_probs=136.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh---hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE---KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++|||||.+|||..+++.|+++|. +|++++|+.   ...++..+++.+.+                        .++.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g------------------------~~v~~   57 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAG------------------------ARVEY   57 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-------------------------EEEE
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCC------------------------Cceee
Confidence            789999999999999999999997 899999993   23455667777654                        68999


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.||++ |.+++.++++++.+++++||.+||+||......+.+.+.++++.+                     +...+.|
T Consensus        58 ~~~Dv~-d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~---------------------~~~Kv~g  115 (181)
T PF08659_consen   58 VQCDVT-DPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAV---------------------LAPKVRG  115 (181)
T ss_dssp             EE--TT-SHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHH---------------------HHHHHHH
T ss_pred             eccCcc-CHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHH---------------------HhhhhhH
Confidence            999999 999999999999999999999999999988888999999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      ..++.+.+.+    ..-..+|++||+++..+.++++.|+++.+.++.|++..+.    .|.++.+|+.|..+
T Consensus       116 ~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  116 LWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAFLDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence            9999887644    3446899999999999999999999999999988876543    47789999887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.83  E-value=3.6e-19  Score=180.50  Aligned_cols=201  Identities=14%  Similarity=-0.019  Sum_probs=139.4

Q ss_pred             CCCCEEEEecCCChHHHH--HHHHHHHcCCEEEEEecChhHHH------------HHHHHHHHhCCCCcchhhhhHHHhh
Q psy3252          96 PTNGTLSVTGGSSGIGKH--VAIEAAKRGAHVTIVARDEKKLL------------QAQEEIKKACPNPKFIRFIEYEEIK  161 (475)
Q Consensus        96 l~gk~vLITGas~GIG~a--iA~~La~~Ga~Vvl~~R~~~~l~------------~~~~~l~~~~~~~~~~~~~~~~~~~  161 (475)
                      -.+|++||||+|+|||++  +|++| ++|++|+++++..+..+            .+.+.+.+.+               
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G---------------  102 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG---------------  102 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC---------------
Confidence            347999999999999999  89999 99999988885432211            2222332221               


Q ss_pred             hcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC---------------------cccCC
Q psy3252         162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT---------------------LEEMT  220 (475)
Q Consensus       162 ~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~---------------------~~~~~  220 (475)
                               ..+..+.||++ +.++++++++++.+++|+||+||||+|......                     ..+.+
T Consensus       103 ---------~~a~~i~~DVs-s~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~  172 (398)
T PRK13656        103 ---------LYAKSINGDAF-SDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTD  172 (398)
T ss_pred             ---------CceEEEEcCCC-CHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCccccc
Confidence                     34677899999 999999999999999999999999999873211                     11111


Q ss_pred             HHHHHHhhhhhhhccccchhhccccchhhhhhHHHH---HHH--HHHHHHHHHhCCCCeEEEeccccccccCCCC--hhh
Q psy3252         221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT---IHM--TKALVEGMKQRGRGCIVITASQAANLGIYGL--AAY  293 (475)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~---~~l--~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~--~~Y  293 (475)
                      .+++...+        ..+....+..  ..++++|.   ...  .....+.|.  ..+++|-.|+..+....|.+  ..-
T Consensus       173 ~~~i~~~s--------~~~~~~~ei~--~Tv~vMggedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~p~Y~~g~m  240 (398)
T PRK13656        173 KDVIIEVT--------VEPATEEEIA--DTVKVMGGEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTHPIYWDGTI  240 (398)
T ss_pred             ccceeEEE--------EeeCCHHHHH--HHHHhhccchHHHHHHHHHhccccc--CCcEEEEEecCCcceeecccCCchH
Confidence            11100000        0000000000  23455555   222  333445553  34899999998887776665  588


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         294 TSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       294 ~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +.+|++|+.-++.|+.+|++.|||+|++.+|.+.|.-....
T Consensus       241 G~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~I  281 (398)
T PRK13656        241 GKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSAI  281 (398)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhcC
Confidence            99999999999999999999999999999999999854433

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.83  E-value=4.2e-19  Score=181.51  Aligned_cols=176  Identities=19%  Similarity=0.128  Sum_probs=135.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++||++|||||+|+||.+++++|+++|++|++++|+..........+.. .                        .++.+
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~------------------------~~~~~   56 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-A------------------------KKIED   56 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-c------------------------CCceE
Confidence            4688999999999999999999999999999999987654333222211 0                        34667


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ +.+++.+++++.     .+|+|||+||....    ..+.++....                     +++|+.+
T Consensus        57 ~~~Dl~-~~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~---------------------~~~N~~g  105 (349)
T TIGR02622        57 HFGDIR-DAAKLRKAIAEF-----KPEIVFHLAAQPLV----RKSYADPLET---------------------FETNVMG  105 (349)
T ss_pred             EEccCC-CHHHHHHHHhhc-----CCCEEEECCccccc----ccchhCHHHH---------------------HHHhHHH
Confidence            899999 999988888754     68999999995422    2233334444                     8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccc------------cCCCChhhHHHHHHHHHHHHHHHHHHcc----CCcEEE
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANL------------GIYGLAAYTSSKFALKGFAEALYMEVKQ----SGLTIT  319 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~----~gIrVn  319 (475)
                      ++++++++...   ...++||++||...+.            +..+...|++||.+++.+++.++.++.+    +|++++
T Consensus       106 ~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~  182 (349)
T TIGR02622       106 TVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIA  182 (349)
T ss_pred             HHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEE
Confidence            99999987431   1246899999965431            1233568999999999999999988855    489999


Q ss_pred             EEeCCCCCCCC
Q psy3252         320 LCLPPDTDTPG  330 (475)
Q Consensus       320 ~V~PG~v~T~~  330 (475)
                      ++.|+.|.+|.
T Consensus       183 ~lR~~~vyGp~  193 (349)
T TIGR02622       183 SARAGNVIGGG  193 (349)
T ss_pred             EEccCcccCCC
Confidence            99999999985

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=7.8e-19  Score=177.46  Aligned_cols=175  Identities=17%  Similarity=0.130  Sum_probs=132.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .||++|||||+|+||.+++++|+++|++|++++|+....+.....+.....                      ..++.++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------------------~~~~~~~   61 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGA----------------------KERLKLF   61 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCC----------------------CCceEEE
Confidence            478999999999999999999999999999999887655443221111110                      0357889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.+++.++++       .+|+||||||....    ..+.+++...                     +++|+.|+
T Consensus        62 ~~D~~-d~~~~~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~---------------------~~~n~~g~  108 (325)
T PLN02989         62 KADLL-DEGSFELAID-------GCETVFHTASPVAI----TVKTDPQVEL---------------------INPAVNGT  108 (325)
T ss_pred             eCCCC-CchHHHHHHc-------CCCEEEEeCCCCCC----CCCCChHHHH---------------------HHHHHHHH
Confidence            99999 8888877765       58999999996421    2222334444                     89999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCC----------------------CChhhHHHHHHHHHHHHHHHHHHccC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIY----------------------GLAAYTSSKFALKGFAEALYMEVKQS  314 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----------------------~~~~Y~aSKaAl~~l~~sLa~El~~~  314 (475)
                      +++++++.+.+   +.++||++||.+++.+..                      ....|+.||.+.+.+++.++.+   +
T Consensus       109 ~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~  182 (325)
T PLN02989        109 INVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---N  182 (325)
T ss_pred             HHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---c
Confidence            99999987753   246899999987653311                      0246999999999998887665   5


Q ss_pred             CcEEEEEeCCCCCCCCCc
Q psy3252         315 GLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       315 gIrVn~V~PG~v~T~~~~  332 (475)
                      |++++.+.|+.+.+|...
T Consensus       183 ~~~~~ilR~~~vyGp~~~  200 (325)
T PLN02989        183 EIDLIVLNPGLVTGPILQ  200 (325)
T ss_pred             CCeEEEEcCCceeCCCCC
Confidence            899999999999999643

>PLN02583 cinnamoyl-CoA reductase

Probab=99.81  E-value=7.5e-18  Score=168.67  Aligned_cols=173  Identities=16%  Similarity=0.118  Sum_probs=124.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH--HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK--LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      |+-.+|++|||||+|+||.+++++|+++|++|+++.|+.+.  ..+....+....                        .
T Consensus         2 ~~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~------------------------~   57 (297)
T PLN02583          2 FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEE------------------------E   57 (297)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCC------------------------C
Confidence            34457899999999999999999999999999999986432  222222221100                        3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.+++.+++.       .+|.++|.++...     +.+ .+++.+                     +++
T Consensus        58 ~~~~~~~Dl~-d~~~~~~~l~-------~~d~v~~~~~~~~-----~~~-~~~~~~---------------------~~~  102 (297)
T PLN02583         58 RLKVFDVDPL-DYHSILDALK-------GCSGLFCCFDPPS-----DYP-SYDEKM---------------------VDV  102 (297)
T ss_pred             ceEEEEecCC-CHHHHHHHHc-------CCCEEEEeCccCC-----ccc-ccHHHH---------------------HHH
Confidence            5778899999 8887765543       5888888765321     111 123344                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC-C--C---------C----------hhhHHHHHHHHHHHHHHHH
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI-Y--G---------L----------AAYTSSKFALKGFAEALYM  309 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~--~---------~----------~~Y~aSKaAl~~l~~sLa~  309 (475)
                      |+.|++++++++.+.+   +.++||++||.++.... +  .         .          ..|+.||...+.++..++.
T Consensus       103 nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~  179 (297)
T PLN02583        103 EVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAM  179 (297)
T ss_pred             HHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHH
Confidence            9999999999987754   23689999998764311 0  0         0          1599999988888877765


Q ss_pred             HHccCCcEEEEEeCCCCCCCCC
Q psy3252         310 EVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       310 El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +   +|+++++|+|+.|.+|..
T Consensus       180 ~---~gi~~v~lrp~~v~Gp~~  198 (297)
T PLN02583        180 D---RGVNMVSINAGLLMGPSL  198 (297)
T ss_pred             H---hCCcEEEEcCCcccCCCC
Confidence            4   589999999999999853

>PRK06720 hypothetical protein; Provisional

Probab=99.79  E-value=3.7e-18  Score=156.98  Aligned_cols=143  Identities=20%  Similarity=0.242  Sum_probs=117.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.++||+++||||++|||.++|+.|+++|++|++++|+.+.++++.+++.+.+                        .++
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~------------------------~~~   67 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG------------------------GEA   67 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcE
Confidence            45789999999999999999999999999999999999888877777776432                        346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.+|++ +.++++++++++.+.+|++|+||||||+... .++.+.+.++ +                       -.+|
T Consensus        68 ~~~~~Dl~-~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~-----------------------~~~~  122 (169)
T PRK06720         68 LFVSYDME-KQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-S-----------------------NVLC  122 (169)
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-h-----------------------hcee
Confidence            67899999 9999999999999999999999999998764 3444444444 3                       2467


Q ss_pred             HHHHHHHHHHHHHHHHhCC-------CCeEEEeccccccc
Q psy3252         253 LYGTIHMTKALVEGMKQRG-------RGCIVITASQAANL  285 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~-------~g~IV~iSS~a~~~  285 (475)
                      +.+++++++.+.+.|.+++       .|++..|||.+..+
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720        123 INDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             ccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            7788999999999988764       48888888876543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=2.6e-17  Score=166.27  Aligned_cols=175  Identities=18%  Similarity=0.153  Sum_probs=128.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      -.||+++||||+|+||.+++++|+++|++|+++.|+.+..+...........                      ..++.+
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----------------------~~~~~~   60 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGA----------------------KERLKL   60 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCC----------------------CCceEE
Confidence            3578999999999999999999999999999999987654433221111110                      035788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ +.+++.++++       .+|++||+||..... .  .  +....+                     +++|+.|
T Consensus        61 ~~~Dl~-~~~~~~~~~~-------~~d~vih~A~~~~~~-~--~--~~~~~~---------------------~~~nv~g  106 (322)
T PLN02986         61 FKADLL-EESSFEQAIE-------GCDAVFHTASPVFFT-V--K--DPQTEL---------------------IDPALKG  106 (322)
T ss_pred             EecCCC-CcchHHHHHh-------CCCEEEEeCCCcCCC-C--C--Cchhhh---------------------hHHHHHH
Confidence            999999 8888777765       589999999964221 1  1  112223                     8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccc-cCC---------------------CChhhHHHHHHHHHHHHHHHHHHcc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANL-GIY---------------------GLAAYTSSKFALKGFAEALYMEVKQ  313 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~~~---------------------~~~~Y~aSKaAl~~l~~sLa~El~~  313 (475)
                      +.++++++...   .+.++||++||.++.. +.+                     ....|++||.+.+.+++.+..+   
T Consensus       107 t~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---  180 (322)
T PLN02986        107 TINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---  180 (322)
T ss_pred             HHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---
Confidence            99999886432   1346899999986532 110                     1356999999988888877665   


Q ss_pred             CCcEEEEEeCCCCCCCCCc
Q psy3252         314 SGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       314 ~gIrVn~V~PG~v~T~~~~  332 (475)
                      +|+++++++|+.|.+|...
T Consensus       181 ~~~~~~~lrp~~v~Gp~~~  199 (322)
T PLN02986        181 NGIDMVVLNPGFICGPLLQ  199 (322)
T ss_pred             hCCeEEEEcccceeCCCCC
Confidence            4899999999999999643

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.77  E-value=6.3e-17  Score=164.72  Aligned_cols=166  Identities=15%  Similarity=0.061  Sum_probs=118.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH-HHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL-QAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+.....                    ....++
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--------------------~~~~~~   62 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPH--------------------PNKARM   62 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccc--------------------cccCce
Confidence            456899999999999999999999999999999998754321 11111110000                    001357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++.+     .+|+||||||.......    .++.+..                     +++|+
T Consensus        63 ~~~~~Dl~-d~~~~~~~~~~~-----~~d~Vih~A~~~~~~~~----~~~~~~~---------------------~~~N~  111 (340)
T PLN02653         63 KLHYGDLS-DASSLRRWLDDI-----KPDEVYNLAAQSHVAVS----FEMPDYT---------------------ADVVA  111 (340)
T ss_pred             EEEEecCC-CHHHHHHHHHHc-----CCCEEEECCcccchhhh----hhChhHH---------------------HHHHH
Confidence            88999999 999998888764     58999999997532211    1122222                     78999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-CeEEEecccccccc----------CCCChhhHHHHHHHHHHHHHHHHHH
Q psy3252         254 YGTIHMTKALVEGMKQRGR-GCIVITASQAANLG----------IYGLAAYTSSKFALKGFAEALYMEV  311 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~-g~IV~iSS~a~~~~----------~~~~~~Y~aSKaAl~~l~~sLa~El  311 (475)
                      .|+.++++++.+.+.+++. -++|++||...+-.          ..+...|+.||.+.+.++++++.++
T Consensus       112 ~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  180 (340)
T PLN02653        112 TGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAY  180 (340)
T ss_pred             HHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc
Confidence            9999999999887764311 26888888533221          1135689999999999999998875

>PLN02214 cinnamoyl-CoA reductase

Probab=99.76  E-value=8.1e-17  Score=164.44  Aligned_cols=166  Identities=20%  Similarity=0.193  Sum_probs=126.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH-HHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA-QEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+..... ...+...                        ..++.
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~   63 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG------------------------KERLI   63 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC------------------------CCcEE
Confidence            4678999999999999999999999999999999986543221 1111110                        03577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+++.++++       .+|+|||+||...     +    +....                     +++|+.
T Consensus        64 ~~~~Dl~-d~~~~~~~~~-------~~d~Vih~A~~~~-----~----~~~~~---------------------~~~nv~  105 (342)
T PLN02214         64 LCKADLQ-DYEALKAAID-------GCDGVFHTASPVT-----D----DPEQM---------------------VEPAVN  105 (342)
T ss_pred             EEecCcC-ChHHHHHHHh-------cCCEEEEecCCCC-----C----CHHHH---------------------HHHHHH
Confidence            8899999 8888777765       5899999999641     1    12333                     899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCC---------------------CChhhHHHHHHHHHHHHHHHHHHcc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIY---------------------GLAAYTSSKFALKGFAEALYMEVKQ  313 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~---------------------~~~~Y~aSKaAl~~l~~sLa~El~~  313 (475)
                      |+.++++++..    .+.++||++||..+.++.+                     ....|+.||.+.+.+++.++.+   
T Consensus       106 gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---  178 (342)
T PLN02214        106 GAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---  178 (342)
T ss_pred             HHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---
Confidence            99999998754    3446899999976543211                     1247999999999998887666   


Q ss_pred             CCcEEEEEeCCCCCCCC
Q psy3252         314 SGLTITLCLPPDTDTPG  330 (475)
Q Consensus       314 ~gIrVn~V~PG~v~T~~  330 (475)
                      +|+++..+.|+.|.+|.
T Consensus       179 ~g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        179 KGVDLVVLNPVLVLGPP  195 (342)
T ss_pred             cCCcEEEEeCCceECCC
Confidence            58999999999999995

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.75  E-value=1e-16  Score=169.12  Aligned_cols=184  Identities=17%  Similarity=0.066  Sum_probs=129.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHH-------HHH------HHHHHHhCCCCcchhhhhHHHh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL-------LQA------QEEIKKACPNPKFIRFIEYEEI  160 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l-------~~~------~~~l~~~~~~~~~~~~~~~~~~  160 (475)
                      -+++++++|||||+|+||.+++++|+++|++|+++++.....       +..      .+.+.....             
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------------  109 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE-------------  109 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHH-------------
Confidence            456788999999999999999999999999999987532110       000      011100000             


Q ss_pred             hhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchh
Q psy3252         161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRL  240 (475)
Q Consensus       161 ~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (475)
                             ....++.++.+|++ |.+.+.++++..     ++|+|||+|+... ......++++++..             
T Consensus       110 -------~~~~~v~~v~~Dl~-d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~-------------  162 (442)
T PLN02572        110 -------VSGKEIELYVGDIC-DFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFT-------------  162 (442)
T ss_pred             -------hhCCcceEEECCCC-CHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHH-------------
Confidence                   00035788999999 999888888753     6999999997642 22223333444433             


Q ss_pred             hccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc------------------------CCCChhhHHH
Q psy3252         241 ALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG------------------------IYGLAAYTSS  296 (475)
Q Consensus       241 ~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------------------~~~~~~Y~aS  296 (475)
                              +++|+.|++++++++...-   ...++|++||...+-.                        ......|+.|
T Consensus       163 --------~~~Nv~gt~nlleaa~~~g---v~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~S  231 (442)
T PLN02572        163 --------QHNNVIGTLNVLFAIKEFA---PDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLS  231 (442)
T ss_pred             --------HHHHHHHHHHHHHHHHHhC---CCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhH
Confidence                    8899999999999875431   1247999999754311                        1123579999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         297 KFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       297 KaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |.+.+.+++.++..   +|+++.++.|+.|.+|..
T Consensus       232 K~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        232 KVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             HHHHHHHHHHHHHh---cCCCEEEEecccccCCCC
Confidence            99998888876655   689999999999999963

>KOG1502|consensus

Probab=99.75  E-value=9e-17  Score=159.47  Aligned_cols=174  Identities=22%  Similarity=0.169  Sum_probs=130.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+++|+||||||.||.+|++.|+++|++|..+.|++++.+.. +.|.+....                     ..++..+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~a---------------------~~~l~l~   62 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEGA---------------------KERLKLF   62 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhcccC---------------------cccceEE
Confidence            578999999999999999999999999999999998874332 223222111                     1458899


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      ..|++ |++++..+++       ++|+|+|.|........   +++  .++                     ++.++.|+
T Consensus        63 ~aDL~-d~~sf~~ai~-------gcdgVfH~Asp~~~~~~---~~e--~~l---------------------i~pav~Gt  108 (327)
T KOG1502|consen   63 KADLL-DEGSFDKAID-------GCDGVFHTASPVDFDLE---DPE--KEL---------------------IDPAVKGT  108 (327)
T ss_pred             ecccc-ccchHHHHHh-------CCCEEEEeCccCCCCCC---CcH--Hhh---------------------hhHHHHHH
Confidence            99999 9999998887       69999999986543221   111  123                     88999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccC-CC-----------C----------hhhHHHHHHHHHHHHHHHHHHcc-
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGI-YG-----------L----------AAYTSSKFALKGFAEALYMEVKQ-  313 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~~-----------~----------~~Y~aSKaAl~~l~~sLa~El~~-  313 (475)
                      .++++++...-   .--+||++||.++.... +.           +          ..|+.||.    +++..|.++++ 
T Consensus       109 ~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~----lAEkaAw~fa~e  181 (327)
T KOG1502|consen  109 KNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKT----LAEKAAWEFAKE  181 (327)
T ss_pred             HHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHH----HHHHHHHHHHHh
Confidence            99999986432   23579999999987653 11           1          24888886    55555556554 


Q ss_pred             CCcEEEEEeCCCCCCCCCcc
Q psy3252         314 SGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       314 ~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+...+|+||.|-+|.+.+
T Consensus       182 ~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  182 NGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             CCccEEEecCCceECCCccc
Confidence            46999999999999998776

>PLN02650 dihydroflavonol-4-reductase

Probab=99.74  E-value=1.9e-16  Score=161.99  Aligned_cols=173  Identities=19%  Similarity=0.119  Sum_probs=127.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ..|++|||||+|+||.+++++|+++|++|++++|+.+........+....                      ...++.++
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------------~~~~~~~v   61 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPG----------------------ATTRLTLW   61 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccC----------------------CCCceEEE
Confidence            35789999999999999999999999999999998765554432211100                      00357889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.+.+.++++       .+|++||+|+....   ...+  ..+..                     +++|+.|+
T Consensus        62 ~~Dl~-d~~~~~~~~~-------~~d~ViH~A~~~~~---~~~~--~~~~~---------------------~~~Nv~gt  107 (351)
T PLN02650         62 KADLA-VEGSFDDAIR-------GCTGVFHVATPMDF---ESKD--PENEV---------------------IKPTVNGM  107 (351)
T ss_pred             EecCC-ChhhHHHHHh-------CCCEEEEeCCCCCC---CCCC--chhhh---------------------hhHHHHHH
Confidence            99999 8887777664       58999999986421   1111  12223                     89999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccC----C------------------CChhhHHHHHHHHHHHHHHHHHHccC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGI----Y------------------GLAAYTSSKFALKGFAEALYMEVKQS  314 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----~------------------~~~~Y~aSKaAl~~l~~sLa~El~~~  314 (475)
                      +++++++.+..   ..++||++||.....+.    +                  ....|+.||.+.+.+++.++.+   +
T Consensus       108 ~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~  181 (351)
T PLN02650        108 LSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---N  181 (351)
T ss_pred             HHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---c
Confidence            99999986542   13579999997543211    1                  1237999999999999888766   6


Q ss_pred             CcEEEEEeCCCCCCCCC
Q psy3252         315 GLTITLCLPPDTDTPGF  331 (475)
Q Consensus       315 gIrVn~V~PG~v~T~~~  331 (475)
                      |++++.+.|+.|.+|..
T Consensus       182 gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        182 GLDFISIIPTLVVGPFI  198 (351)
T ss_pred             CCeEEEECCCceECCCC
Confidence            89999999999999954

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.74  E-value=6.9e-17  Score=165.27  Aligned_cols=174  Identities=13%  Similarity=0.114  Sum_probs=125.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEE-EEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVT-IVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vv-l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      |++|||||+|+||.++++.|+++|++|+ ++++.... ... ..+.....                      ..++.++.
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~----------------------~~~~~~~~   57 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQ----------------------SERFAFEK   57 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhccc----------------------CCceEEEE
Confidence            5799999999999999999999998755 45554321 111 01111000                      03577889


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.++++++++.     ..+|+||||||....    +.+.++.+..                     +++|+.|++
T Consensus        58 ~Dl~-d~~~~~~~~~~-----~~~D~Vih~A~~~~~----~~~~~~~~~~---------------------~~~N~~gt~  106 (355)
T PRK10217         58 VDIC-DRAELARVFTE-----HQPDCVMHLAAESHV----DRSIDGPAAF---------------------IETNIVGTY  106 (355)
T ss_pred             CCCc-ChHHHHHHHhh-----cCCCEEEECCcccCc----chhhhChHHH---------------------HHHhhHHHH
Confidence            9999 98888888775     269999999997532    1222334444                     999999999


Q ss_pred             HHHHHHHHHHH---h--CCCCeEEEeccccccc-------------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         258 HMTKALVEGMK---Q--RGRGCIVITASQAANL-------------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       258 ~l~~~~lp~m~---~--~~~g~IV~iSS~a~~~-------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                      ++++++.+.|.   +  .+..++|++||.+.+-             +..+.+.|+.||.+.+.+++.++.+   .|+++.
T Consensus       107 ~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~---~~~~~~  183 (355)
T PRK10217        107 TLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT---YGLPTL  183 (355)
T ss_pred             HHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCeE
Confidence            99999987542   1  1235899999964321             1224568999999999999998776   478999


Q ss_pred             EEeCCCCCCCC
Q psy3252         320 LCLPPDTDTPG  330 (475)
Q Consensus       320 ~V~PG~v~T~~  330 (475)
                      .+.|+.|.+|.
T Consensus       184 i~r~~~v~Gp~  194 (355)
T PRK10217        184 ITNCSNNYGPY  194 (355)
T ss_pred             EEeeeeeeCCC
Confidence            99999999985

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.73  E-value=1.7e-16  Score=159.89  Aligned_cols=173  Identities=17%  Similarity=0.111  Sum_probs=124.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +||++|||||+|+||.+++++|+++|++|++++|+........ .+.....                     ...++.++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~---------------------~~~~~~~~   60 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDG---------------------AKERLHLF   60 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccC---------------------CCCceEEE
Confidence            4689999999999999999999999999999999865433221 1111100                     00357889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.+++..+++       .+|++||+|+..... . . .+  ....                     +++|+.|+
T Consensus        61 ~~Dl~-~~~~~~~~~~-------~~d~Vih~A~~~~~~-~-~-~~--~~~~---------------------~~~nv~gt  106 (322)
T PLN02662         61 KANLL-EEGSFDSVVD-------GCEGVFHTASPFYHD-V-T-DP--QAEL---------------------IDPAVKGT  106 (322)
T ss_pred             ecccc-CcchHHHHHc-------CCCEEEEeCCcccCC-C-C-Ch--HHHH---------------------HHHHHHHH
Confidence            99999 8777776654       589999999864211 1 1 11  1223                     89999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEecccccc-cc-C---------------CC-----ChhhHHHHHHHHHHHHHHHHHHccC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAAN-LG-I---------------YG-----LAAYTSSKFALKGFAEALYMEVKQS  314 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~-~---------------~~-----~~~Y~aSKaAl~~l~~sLa~El~~~  314 (475)
                      .++++++....   +..+||++||.++. .+ .               |.     ...|+.||.+.+.+++.+..+   +
T Consensus       107 ~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~  180 (322)
T PLN02662        107 LNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---N  180 (322)
T ss_pred             HHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---c
Confidence            99999876431   34589999997642 11 1               10     147999999988888776654   5


Q ss_pred             CcEEEEEeCCCCCCCCC
Q psy3252         315 GLTITLCLPPDTDTPGF  331 (475)
Q Consensus       315 gIrVn~V~PG~v~T~~~  331 (475)
                      |++++.+.|+.+.+|..
T Consensus       181 ~~~~~~lRp~~v~Gp~~  197 (322)
T PLN02662        181 GIDMVTINPAMVIGPLL  197 (322)
T ss_pred             CCcEEEEeCCcccCCCC
Confidence            89999999999999954

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.73  E-value=1.7e-16  Score=161.41  Aligned_cols=173  Identities=16%  Similarity=0.167  Sum_probs=127.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+.++++|||||+|+||.+++++|+++|++|+++.|+.+....... +... ..                     ..++.
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~---------------------~~~~~   62 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRAL-QE---------------------LGDLK   62 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhc-CC---------------------CCceE
Confidence            3457899999999999999999999999999988887644332211 1110 00                     02477


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+++.++++       ++|++||+|+...   ....  +.....                     +++|+.
T Consensus        63 ~~~~Dl~-d~~~~~~~~~-------~~d~vih~A~~~~---~~~~--~~~~~~---------------------~~~nv~  108 (338)
T PLN00198         63 IFGADLT-DEESFEAPIA-------GCDLVFHVATPVN---FASE--DPENDM---------------------IKPAIQ  108 (338)
T ss_pred             EEEcCCC-ChHHHHHHHh-------cCCEEEEeCCCCc---cCCC--ChHHHH---------------------HHHHHH
Confidence            8999999 8887776654       5899999998531   1111  122223                     789999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccC------------------------CCChhhHHHHHHHHHHHHHHHHH
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGI------------------------YGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------------------~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                      |+.++++++.+.   .+.++||++||.+.+...                        +....|+.||.+.+.+++.++.+
T Consensus       109 g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~  185 (338)
T PLN00198        109 GVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE  185 (338)
T ss_pred             HHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh
Confidence            999999997653   234689999997654311                        12457999999999998887765


Q ss_pred             HccCCcEEEEEeCCCCCCCC
Q psy3252         311 VKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~T~~  330 (475)
                         +|++++.+.|+.|.+|.
T Consensus       186 ---~~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        186 ---NNIDLITVIPTLMAGPS  202 (338)
T ss_pred             ---cCceEEEEeCCceECCC
Confidence               68999999999999995

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.73  E-value=1.5e-16  Score=166.01  Aligned_cols=175  Identities=19%  Similarity=0.242  Sum_probs=149.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      -+.||+++||||+|.||.++|+++++.+. ++++.+|++.++.....++....+.                      .++
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~----------------------~~~  304 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPE----------------------LKL  304 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCC----------------------cce
Confidence            46899999999999999999999999998 7999999999999999999887653                      678


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++-+||. |.+.+..+++..     ++|+++|.|+.-+...++..+.|.                         +.+|+
T Consensus       305 ~~~igdVr-D~~~~~~~~~~~-----kvd~VfHAAA~KHVPl~E~nP~Ea-------------------------i~tNV  353 (588)
T COG1086         305 RFYIGDVR-DRDRVERAMEGH-----KVDIVFHAAALKHVPLVEYNPEEA-------------------------IKTNV  353 (588)
T ss_pred             EEEecccc-cHHHHHHHHhcC-----CCceEEEhhhhccCcchhcCHHHH-------------------------HHHhh
Confidence            89999999 999999888754     699999999987654455444444                         88999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.++++++...    +-.++|++|+--+..|   ...|++||...+.++.+++......+-++.+|.-|+|-..
T Consensus       354 ~GT~nv~~aa~~~----~V~~~V~iSTDKAV~P---tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGS  422 (588)
T COG1086         354 LGTENVAEAAIKN----GVKKFVLISTDKAVNP---TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGS  422 (588)
T ss_pred             HhHHHHHHHHHHh----CCCEEEEEecCcccCC---chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecC
Confidence            9999999998655    3456999999887655   4689999999999999999877766789999999999875

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.73  E-value=2.7e-16  Score=161.08  Aligned_cols=179  Identities=19%  Similarity=0.190  Sum_probs=130.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ..++++|||||+|+||.+++++|+++|++|++++|+.+..+.+...+.. .                        .++.+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~------------------------~~~~~   62 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-G------------------------DRLRL   62 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-C------------------------CeEEE
Confidence            3467999999999999999999999999999999987655544333221 1                        45788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC-cccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +.+|++ +.+++.++++       .+|+|||+||...... ....+.+.+...                   .++++|+.
T Consensus        63 ~~~Dl~-~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~-------------------n~~~~~~~  115 (353)
T PLN02896         63 FRADLQ-EEGSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQS-------------------KVIDPAIK  115 (353)
T ss_pred             EECCCC-CHHHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhH-------------------HhHHHHHH
Confidence            999999 8887777654       5899999999764321 111222222111                   23788889


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccC-------------------------CCChhhHHHHHHHHHHHHHHHH
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGI-------------------------YGLAAYTSSKFALKGFAEALYM  309 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-------------------------~~~~~Y~aSKaAl~~l~~sLa~  309 (475)
                      |++++++++.+..   +.++||++||.+.+...                         +....|+.||.+.+.+++.++.
T Consensus       116 g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  192 (353)
T PLN02896        116 GTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAK  192 (353)
T ss_pred             HHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHH
Confidence            9999999886542   23689999997654211                         0113799999999999888766


Q ss_pred             HHccCCcEEEEEeCCCCCCCCCc
Q psy3252         310 EVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       310 El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +   +|+++.++.|+.|.+|...
T Consensus       193 ~---~~~~~~~lR~~~vyGp~~~  212 (353)
T PLN02896        193 E---NGIDLVSVITTTVAGPFLT  212 (353)
T ss_pred             H---cCCeEEEEcCCcccCCCcC
Confidence            5   5899999999999999643

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.71  E-value=9.4e-16  Score=156.36  Aligned_cols=177  Identities=15%  Similarity=0.055  Sum_probs=118.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH-HHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL-QAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      |++|||||+|+||.+++++|+++|++|++++|+.+... .....+.....                   ......+.++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~   61 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPH-------------------NVNKARMKLHY   61 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccc-------------------cccccceeEEE
Confidence            58999999999999999999999999999999754210 11111110000                   00013578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++..     ++|++||+|+........+    .-...                     +++|+.|+.
T Consensus        62 ~Dl~-d~~~l~~~~~~~-----~~d~ViH~Aa~~~~~~~~~----~~~~~---------------------~~~n~~gt~  110 (343)
T TIGR01472        62 GDLT-DSSNLRRIIDEI-----KPTEIYNLAAQSHVKVSFE----IPEYT---------------------ADVDGIGTL  110 (343)
T ss_pred             eccC-CHHHHHHHHHhC-----CCCEEEECCcccccchhhh----ChHHH---------------------HHHHHHHHH
Confidence            9999 999888888754     5899999999754321111    11112                     789999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccc-----------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANL-----------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++++++.+.-.+ +..++|++||...+-           +....+.|++||.+.+.+++.++.++   |+++....+..+
T Consensus       111 ~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~  186 (343)
T TIGR01472       111 RLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNH  186 (343)
T ss_pred             HHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeeccc
Confidence            999998764211 113799999964332           11235689999999999999988774   444444444444


Q ss_pred             CCC
Q psy3252         327 DTP  329 (475)
Q Consensus       327 ~T~  329 (475)
                      .+|
T Consensus       187 ~gp  189 (343)
T TIGR01472       187 ESP  189 (343)
T ss_pred             CCC
Confidence            444

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.70  E-value=1.8e-15  Score=147.59  Aligned_cols=167  Identities=17%  Similarity=0.209  Sum_probs=115.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ..+++++||||+|+||++++++|+++|++|+++.|+.+++.....    ..                        ..+.+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~------------------------~~~~~   66 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QD------------------------PSLQI   66 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cC------------------------CceEE
Confidence            446799999999999999999999999999999999765443211    00                        34778


Q ss_pred             EEeecCCCH-HHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         176 VSLDISKDY-ENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       176 ~~~Dvt~d~-~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +.+|++ +. +++.   +.+.   .++|+||+|+|.....   + +.    ..                     +++|+.
T Consensus        67 ~~~Dl~-d~~~~l~---~~~~---~~~d~vi~~~g~~~~~---~-~~----~~---------------------~~~n~~  110 (251)
T PLN00141         67 VRADVT-EGSDKLV---EAIG---DDSDAVICATGFRRSF---D-PF----AP---------------------WKVDNF  110 (251)
T ss_pred             EEeeCC-CCHHHHH---HHhh---cCCCEEEECCCCCcCC---C-CC----Cc---------------------eeeehH
Confidence            999999 62 3222   2210   2699999999864211   0 00    01                     678888


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccc---cCCCChhhHHHHHHHHHHHHHHHHH--HccCCcEEEEEeCCCCCCC
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANL---GIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~---~~~~~~~Y~aSKaAl~~l~~sLa~E--l~~~gIrVn~V~PG~v~T~  329 (475)
                      ++.++++++    .+.+.++||++||...+.   +.+....|.+.|.+...+...+..|  +...|+++++|+||++.++
T Consensus       111 ~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~  186 (251)
T PLN00141        111 GTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTND  186 (251)
T ss_pred             HHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCC
Confidence            988888886    345568999999986432   2233456777776554443333333  5678999999999999876


Q ss_pred             C
Q psy3252         330 G  330 (475)
Q Consensus       330 ~  330 (475)
                      +
T Consensus       187 ~  187 (251)
T PLN00141        187 P  187 (251)
T ss_pred             C
Confidence            3

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.69  E-value=1.9e-15  Score=152.06  Aligned_cols=159  Identities=24%  Similarity=0.224  Sum_probs=121.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||+|+||.++++.|+++|++|++++|+.+.....    ..                          ..+.++.+|
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~--------------------------~~~~~~~~D   51 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----EG--------------------------LDVEIVEGD   51 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----cc--------------------------CCceEEEee
Confidence            689999999999999999999999999999986543211    00                          246789999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ +.+++.++++       .+|++||+|+....   ..   ++.+..                     +++|+.++.++
T Consensus        52 ~~-~~~~l~~~~~-------~~d~vi~~a~~~~~---~~---~~~~~~---------------------~~~n~~~~~~l   96 (328)
T TIGR03466        52 LR-DPASLRKAVA-------GCRALFHVAADYRL---WA---PDPEEM---------------------YAANVEGTRNL   96 (328)
T ss_pred             CC-CHHHHHHHHh-------CCCEEEEeceeccc---CC---CCHHHH---------------------HHHHHHHHHHH
Confidence            99 8888777664       68999999985321   11   122333                     88999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCC---------------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIY---------------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~---------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                      ++++..    .+.+++|++||...+...+               ....|+.+|.+.+.+++.++.+   +|++++.+.|+
T Consensus        97 ~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~  169 (328)
T TIGR03466        97 LRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPS  169 (328)
T ss_pred             HHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCC
Confidence            888753    3456899999976543211               1347999999999999887665   58999999999


Q ss_pred             CCCCCC
Q psy3252         325 DTDTPG  330 (475)
Q Consensus       325 ~v~T~~  330 (475)
                      .+.++.
T Consensus       170 ~~~G~~  175 (328)
T TIGR03466       170 TPIGPR  175 (328)
T ss_pred             ccCCCC
Confidence            998874

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.68  E-value=2.8e-15  Score=154.68  Aligned_cols=180  Identities=19%  Similarity=0.137  Sum_probs=127.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+.++|+||||||+|+||.+++++|+++|++|+++.|+.+..+.+ .++...+...                  .....+
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~------------------~~~~~~  109 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMG------------------RSNDGI  109 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhcccc------------------ccCCce
Confidence            456689999999999999999999999999999988887655543 2222111000                  000247


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++       .+|.+||.|+...........    +..                     .++|+
T Consensus       110 ~~v~~Dl~-d~~~l~~~i~-------~~d~V~hlA~~~~~~~~~~~~----~~~---------------------~~~nv  156 (367)
T PLN02686        110 WTVMANLT-EPESLHEAFD-------GCAGVFHTSAFVDPAGLSGYT----KSM---------------------AELEA  156 (367)
T ss_pred             EEEEcCCC-CHHHHHHHHH-------hccEEEecCeeeccccccccc----chh---------------------hhhhH
Confidence            78999999 9888887775       478999999875332211111    112                     67899


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccc-ccc----C------------------CCChhhHHHHHHHHHHHHHHHHH
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAA-NLG----I------------------YGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~-~~~----~------------------~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                      .++.++++++...   .+-.++|++||.++ .++    .                  .....|+.||.+.+.+++.++.+
T Consensus       157 ~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~  233 (367)
T PLN02686        157 KASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG  233 (367)
T ss_pred             HHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh
Confidence            9999998886432   13357999999642 111    0                  01246999999999999887765


Q ss_pred             HccCCcEEEEEeCCCCCCCCC
Q psy3252         311 VKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~T~~~  331 (475)
                         +|+++++|+|++|.+|..
T Consensus       234 ---~gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        234 ---KGLKLATICPALVTGPGF  251 (367)
T ss_pred             ---cCceEEEEcCCceECCCC
Confidence               689999999999999953

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.68  E-value=5.3e-17  Score=159.66  Aligned_cols=173  Identities=19%  Similarity=0.237  Sum_probs=125.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ||||||+|.||.+++++|++.+. +|+++++++.++-++..++....+...                  ....+..+.+|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~------------------v~~~~~~vigD   62 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPK------------------VRFEIVPVIGD   62 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TT------------------CEEEEE--CTS
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccC------------------cccccCceeec
Confidence            69999999999999999999996 799999999999999998876553211                  11234567889


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+.+..++++.     ++|+++|.|+.-+....++.+.+.                         +++|+.|+.++
T Consensus        63 vr-d~~~l~~~~~~~-----~pdiVfHaAA~KhVpl~E~~p~ea-------------------------v~tNv~GT~nv  111 (293)
T PF02719_consen   63 VR-DKERLNRIFEEY-----KPDIVFHAAALKHVPLMEDNPFEA-------------------------VKTNVLGTQNV  111 (293)
T ss_dssp             CC-HHHHHHHHTT-------T-SEEEE------HHHHCCCHHHH-------------------------HHHHCHHHHHH
T ss_pred             cc-CHHHHHHHHhhc-----CCCEEEEChhcCCCChHHhCHHHH-------------------------HHHHHHHHHHH
Confidence            99 988888887654     799999999976554444433322                         88999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++++..+    +-.++|+||+--+..|   ...|++||...+.++.+.+......+.++.+|.-|+|-..
T Consensus       112 ~~aa~~~----~v~~~v~ISTDKAv~P---tnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS  174 (293)
T PF02719_consen  112 AEAAIEH----GVERFVFISTDKAVNP---TNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGS  174 (293)
T ss_dssp             HHHHHHT----T-SEEEEEEECGCSS-----SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTG
T ss_pred             HHHHHHc----CCCEEEEccccccCCC---CcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecC
Confidence            9998764    4457999999887654   4789999999999999998887777899999999999764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.68  E-value=2.4e-15  Score=153.45  Aligned_cols=179  Identities=17%  Similarity=0.263  Sum_probs=126.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|+++||||+|+||.+++++|+++|++|++++|......+....+......                    ...++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~   60 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGD--------------------LGDNL   60 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcc--------------------cCccc
Confidence            3567899999999999999999999999999999987543222222222221100                    00346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++..+++..     .+|+|||+||......    +.++....                     +++|+
T Consensus        61 ~~~~~D~~-~~~~l~~~~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~---------------------~~~n~  109 (352)
T PLN02240         61 VFHKVDLR-DKEALEKVFAST-----RFDAVIHFAGLKAVGE----SVAKPLLY---------------------YDNNL  109 (352)
T ss_pred             eEEecCcC-CHHHHHHHHHhC-----CCCEEEEccccCCccc----cccCHHHH---------------------HHHHH
Confidence            78899999 999888887652     7999999999753211    11233333                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      .++.++++++    .+.+.+++|++||...+..           ..+...|+.||.+.+.+++.++.+  ..++.+..+.
T Consensus       110 ~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R  183 (352)
T PLN02240        110 VGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLR  183 (352)
T ss_pred             HHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEe
Confidence            9999998865    3344468999999643311           113568999999999999888755  3467888888


Q ss_pred             CCCCCCC
Q psy3252         323 PPDTDTP  329 (475)
Q Consensus       323 PG~v~T~  329 (475)
                      ++.+..+
T Consensus       184 ~~~v~G~  190 (352)
T PLN02240        184 YFNPVGA  190 (352)
T ss_pred             ecCcCCC
Confidence            8777664

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.67  E-value=2e-15  Score=154.57  Aligned_cols=180  Identities=13%  Similarity=0.057  Sum_probs=127.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+.+++|+||||||+|.||.+++++|+++|++|++++|...........+....+.                   ....+
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~-------------------~~~~~   70 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE-------------------EQWSR   70 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcccc-------------------ccCCc
Confidence            35677899999999999999999999999999999998654322222211111000                   00035


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.+.+..+++       .+|++||.|+....... .   ++....                     +++|
T Consensus        71 ~~~~~~Di~-d~~~l~~~~~-------~~d~ViHlAa~~~~~~~-~---~~~~~~---------------------~~~N  117 (348)
T PRK15181         71 FIFIQGDIR-KFTDCQKACK-------NVDYVLHQAALGSVPRS-L---KDPIAT---------------------NSAN  117 (348)
T ss_pred             eEEEEccCC-CHHHHHHHhh-------CCCEEEECccccCchhh-h---hCHHHH---------------------HHHH
Confidence            788999999 8777766654       58999999997532111 1   111222                     8899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      +.|+.++++++.    +.+..++|++||...+-..           .....|+.||.+.+.+++.++.+   +|+++..+
T Consensus       118 v~gt~nll~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~l  190 (348)
T PRK15181        118 IDGFLNMLTAAR----DAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGL  190 (348)
T ss_pred             HHHHHHHHHHHH----HcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEE
Confidence            999999998874    3344589999987543211           12357999999999988877655   58999999


Q ss_pred             eCCCCCCCCC
Q psy3252         322 LPPDTDTPGF  331 (475)
Q Consensus       322 ~PG~v~T~~~  331 (475)
                      .|+.|.+|..
T Consensus       191 R~~~vyGp~~  200 (348)
T PRK15181        191 RYFNVFGRRQ  200 (348)
T ss_pred             EecceeCcCC
Confidence            9999999853

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.65  E-value=6.8e-15  Score=150.35  Aligned_cols=171  Identities=15%  Similarity=0.103  Sum_probs=122.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCE-EEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++|||||+|+||.+++++|+++|++ |+.+++..  ...+...    ...+                      ..++.++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~----~~~~----------------------~~~~~~~   55 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA----DVSD----------------------SERYVFE   55 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH----hccc----------------------CCceEEE
Confidence            5899999999999999999999986 55555532  1111111    1110                      0346788


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.+++++.     .+|++||+||......    +....+..                     +++|+.|+
T Consensus        56 ~~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~~~~----~~~~~~~~---------------------~~~N~~gt  104 (352)
T PRK10084         56 HADIC-DRAELDRIFAQH-----QPDAVMHLAAESHVDR----SITGPAAF---------------------IETNIVGT  104 (352)
T ss_pred             EecCC-CHHHHHHHHHhc-----CCCEEEECCcccCCcc----hhcCchhh---------------------hhhhhHHH
Confidence            99999 999988888752     7999999999653211    11112223                     89999999


Q ss_pred             HHHHHHHHHHHHhC-----CCCeEEEecccccccc---------------------CCCChhhHHHHHHHHHHHHHHHHH
Q psy3252         257 IHMTKALVEGMKQR-----GRGCIVITASQAANLG---------------------IYGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       257 ~~l~~~~lp~m~~~-----~~g~IV~iSS~a~~~~---------------------~~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                      .++++++.+.|...     +..++|++||...+..                     ......|+.||.+.+.+++.++.+
T Consensus       105 ~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  184 (352)
T PRK10084        105 YVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRT  184 (352)
T ss_pred             HHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            99999998876421     2247999999643321                     123468999999999999998776


Q ss_pred             HccCCcEEEEEeCCCCCCCC
Q psy3252         311 VKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~T~~  330 (475)
                         +|+++..+.|+.|.+|.
T Consensus       185 ---~g~~~vilr~~~v~Gp~  201 (352)
T PRK10084        185 ---YGLPTIVTNCSNNYGPY  201 (352)
T ss_pred             ---hCCCEEEEeccceeCCC
Confidence               47788889999999884

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.64  E-value=6.3e-15  Score=146.44  Aligned_cols=166  Identities=24%  Similarity=0.264  Sum_probs=121.1

Q ss_pred             EEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         102 SVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       102 LITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      |||||+|.||.+|+++|+++|  ++|.++++.......  ..+...                         ....++.+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~-------------------------~~~~~~~~D   53 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS-------------------------GVKEYIQGD   53 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc-------------------------cceeEEEec
Confidence            699999999999999999999  689988887543210  111110                         223389999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++       .+|++||+|+......  +.   ..+.+                     +++|+.|+-++
T Consensus        54 i~-d~~~l~~a~~-------g~d~V~H~Aa~~~~~~--~~---~~~~~---------------------~~vNV~GT~nv   99 (280)
T PF01073_consen   54 IT-DPESLEEALE-------GVDVVFHTAAPVPPWG--DY---PPEEY---------------------YKVNVDGTRNV   99 (280)
T ss_pred             cc-cHHHHHHHhc-------CCceEEEeCccccccC--cc---cHHHH---------------------HHHHHHHHHHH
Confidence            99 9999888876       6899999999764322  12   22333                     89999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC-----------------CCChhhHHHHHHHHHHHHHHHH-HHc-cCCcEEEE
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI-----------------YGLAAYTSSKFALKGFAEALYM-EVK-QSGLTITL  320 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------------~~~~~Y~aSKaAl~~l~~sLa~-El~-~~gIrVn~  320 (475)
                      ++++..    .+-.++|++||.+.....                 .....|+.||+..+.++..... ++. ...++..+
T Consensus       100 l~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~  175 (280)
T PF01073_consen  100 LEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCA  175 (280)
T ss_pred             HHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEE
Confidence            998864    355689999998876541                 1234799999988888766543 111 12489999


Q ss_pred             EeCCCCCCCCCc
Q psy3252         321 CLPPDTDTPGFE  332 (475)
Q Consensus       321 V~PG~v~T~~~~  332 (475)
                      |+|..|.+|...
T Consensus       176 lRP~~IyGp~d~  187 (280)
T PF01073_consen  176 LRPAGIYGPGDQ  187 (280)
T ss_pred             EeccEEeCcccc
Confidence            999999999543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.63  E-value=1.3e-14  Score=144.94  Aligned_cols=169  Identities=17%  Similarity=0.147  Sum_probs=122.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHH-HHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKL-LQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +++||||+|+||.+++++|+++|  .+|++++|..... .+..+.+.. .                        ..+.++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~------------------------~~~~~~   55 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-N------------------------PRYRFV   55 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-C------------------------CCcEEE
Confidence            48999999999999999999988  6898887642111 111111110 0                        346788


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++..     ++|+|||+||.....    .+.+..+..                     +++|+.++
T Consensus        56 ~~Dl~-~~~~~~~~~~~~-----~~d~vi~~a~~~~~~----~~~~~~~~~---------------------~~~n~~~~  104 (317)
T TIGR01181        56 KGDIG-DRELVSRLFTEH-----QPDAVVHFAAESHVD----RSISGPAAF---------------------IETNVVGT  104 (317)
T ss_pred             EcCCc-CHHHHHHHHhhc-----CCCEEEEcccccCch----hhhhCHHHH---------------------HHHHHHHH
Confidence            99999 999988887653     599999999975321    122233333                     89999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEecccccccc------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLG------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                      .++++++...+.   ..++|++||...+..            ......|+.+|.+++.+++.++.+   .|+++.++.|+
T Consensus       105 ~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~  178 (317)
T TIGR01181       105 YTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCS  178 (317)
T ss_pred             HHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEec
Confidence            999988765432   247999998643221            112347999999999999988776   57999999999


Q ss_pred             CCCCCC
Q psy3252         325 DTDTPG  330 (475)
Q Consensus       325 ~v~T~~  330 (475)
                      .+.+|.
T Consensus       179 ~i~G~~  184 (317)
T TIGR01181       179 NNYGPY  184 (317)
T ss_pred             cccCCC
Confidence            999874

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.62  E-value=1.6e-14  Score=149.89  Aligned_cols=170  Identities=15%  Similarity=0.113  Sum_probs=119.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +.++||||||+|.||.+++++|+++ |++|++++|+.++...+..    ...                   ..+..++.+
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~----~~~-------------------~~~~~~~~~   69 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE----PDT-------------------VPWSGRIQF   69 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhc----ccc-------------------ccCCCCeEE
Confidence            3457999999999999999999998 5899999987654432211    100                   001135889


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+.+.++++       .+|+|||+|+......... .+   ...                     +..|+.+
T Consensus        70 ~~~Dl~-d~~~l~~~~~-------~~d~ViHlAa~~~~~~~~~-~~---~~~---------------------~~~n~~g  116 (386)
T PLN02427         70 HRINIK-HDSRLEGLIK-------MADLTINLAAICTPADYNT-RP---LDT---------------------IYSNFID  116 (386)
T ss_pred             EEcCCC-ChHHHHHHhh-------cCCEEEEcccccChhhhhh-Ch---HHH---------------------HHHHHHH
Confidence            999999 8887776664       4799999999753321111 11   111                     6789999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccC---------C------------------------CChhhHHHHHHHHH
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGI---------Y------------------------GLAAYTSSKFALKG  302 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------~------------------------~~~~Y~aSKaAl~~  302 (475)
                      +.++++++..    .+ .++|++||...+-..         |                        ....|+.||.+.+.
T Consensus       117 t~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~  191 (386)
T PLN02427        117 ALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIER  191 (386)
T ss_pred             HHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHH
Confidence            9999887642    23 579999996533110         0                        11369999999998


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         303 FAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       303 l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++..++..   +|+++..+.|+.|.+|.
T Consensus       192 ~~~~~~~~---~g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        192 LIYAEGAE---NGLEFTIVRPFNWIGPR  216 (386)
T ss_pred             HHHHHHhh---cCCceEEecccceeCCC
Confidence            88766543   68999999999999985

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.62  E-value=2.2e-14  Score=145.61  Aligned_cols=170  Identities=19%  Similarity=0.212  Sum_probs=120.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|+||.+++++|+++|++|++++|...........+.....                       .++.++.+|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~D   58 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG-----------------------KHPTFVEGD   58 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcC-----------------------CCceEEEcc
Confidence            589999999999999999999999999988653332222222222111                       245678999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++.     .++|++||+||........    +.....                     +++|+.++.++
T Consensus        59 l~-d~~~~~~~~~~-----~~~d~vvh~a~~~~~~~~~----~~~~~~---------------------~~~n~~~~~~l  107 (338)
T PRK10675         59 IR-NEALLTEILHD-----HAIDTVIHFAGLKAVGESV----QKPLEY---------------------YDNNVNGTLRL  107 (338)
T ss_pred             CC-CHHHHHHHHhc-----CCCCEEEECCccccccchh----hCHHHH---------------------HHHHHHHHHHH
Confidence            99 98888877653     3699999999975322111    111222                     88999999998


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      ++++    .+.+.++||++||...+-..            .....|+.+|.+.+.+++.++.+.  .++++..+.++.+.
T Consensus       108 ~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~  181 (338)
T PRK10675        108 ISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPV  181 (338)
T ss_pred             HHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeec
Confidence            8765    44455689999997543110            235789999999999999987653  35788888887777


Q ss_pred             CC
Q psy3252         328 TP  329 (475)
Q Consensus       328 T~  329 (475)
                      ++
T Consensus       182 g~  183 (338)
T PRK10675        182 GA  183 (338)
T ss_pred             CC
Confidence            65

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.60  E-value=1.9e-13  Score=142.10  Aligned_cols=242  Identities=20%  Similarity=0.175  Sum_probs=151.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH--HHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ--AQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.++.+.  ...++....                        ..
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~------------------------~~  112 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKEL------------------------PG  112 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhc------------------------CC
Confidence            3457799999999999999999999999999999998765421  111111111                        34


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      ++++.+|++ |.+++.++++..   .+++|+||||+|.....     ..    ..                     +++|
T Consensus       113 v~~v~~Dl~-d~~~l~~~~~~~---~~~~D~Vi~~aa~~~~~-----~~----~~---------------------~~vn  158 (390)
T PLN02657        113 AEVVFGDVT-DADSLRKVLFSE---GDPVDVVVSCLASRTGG-----VK----DS---------------------WKID  158 (390)
T ss_pred             ceEEEeeCC-CHHHHHHHHHHh---CCCCcEEEECCccCCCC-----Cc----cc---------------------hhhH
Confidence            778999999 999988887643   12699999999853211     00    11                     6788


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.++.++++++.    +.+.+++|++||.....   ....|..+|...+...+.     ...|++++.|.|+.+..++..
T Consensus       159 ~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~---p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~  226 (390)
T PLN02657        159 YQATKNSLDAGR----EVGAKHFVLLSAICVQK---PLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG  226 (390)
T ss_pred             HHHHHHHHHHHH----HcCCCEEEEEeeccccC---cchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHH
Confidence            888888877763    44557899999986543   345788899888776543     247899999999887754321


Q ss_pred             ccccCCc-ccccccc--ccCC--CCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHH
Q psy3252         333 NEEKSKP-RETSLIS--QTGG--LYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQL  407 (475)
Q Consensus       333 ~~~~~~~-~~~~~~~--~~~~--~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i  407 (475)
                      ....... .......  ...+  ....+|+|++.+.+....   ..           ......+.+....++..++++.+
T Consensus       227 ~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~---~~-----------~~~~~~Iggp~~~~S~~Eia~~l  292 (390)
T PLN02657        227 QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE---SK-----------INKVLPIGGPGKALTPLEQGEML  292 (390)
T ss_pred             HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc---cc-----------cCCEEEcCCCCcccCHHHHHHHH
Confidence            1100000 0000000  0011  245567777655443210   00           01112222222367889999999


Q ss_pred             HHHHhcCCeeEEe
Q psy3252         408 LEDALKGNYFSTV  420 (475)
Q Consensus       408 ~~ai~~g~~~~~~  420 (475)
                      .+.+.+......+
T Consensus       293 ~~~lG~~~~~~~v  305 (390)
T PLN02657        293 FRILGKEPKFFKV  305 (390)
T ss_pred             HHHhCCCCceEEc
Confidence            8888654333333

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.59  E-value=4.9e-14  Score=141.40  Aligned_cols=169  Identities=19%  Similarity=0.228  Sum_probs=121.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|+||.+++++|+++|++|++++|......+....+...                         ..+.++.+|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~D   55 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-------------------------TRVTFVEGD   55 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-------------------------cceEEEECC
Confidence            3789999999999999999999999998876433221111111100                         246778999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ +.+++.++++.     +++|++|||||.......    .++....                     +++|+.++..+
T Consensus        56 ~~-~~~~~~~~~~~-----~~~d~vv~~ag~~~~~~~----~~~~~~~---------------------~~~n~~~~~~l  104 (328)
T TIGR01179        56 LR-DRELLDRLFEE-----HKIDAVIHFAGLIAVGES----VQDPLKY---------------------YRNNVVNTLNL  104 (328)
T ss_pred             CC-CHHHHHHHHHh-----CCCcEEEECccccCcchh----hcCchhh---------------------hhhhHHHHHHH
Confidence            99 98988887763     479999999997532211    1111222                     88999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++++.    +.+.+++|++||...+...           .....|+.+|++++.+++.++.+  ..+++++.+.|+.+.+
T Consensus       105 ~~~~~----~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~g  178 (328)
T TIGR01179       105 LEAMQ----QTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKA--DPGLSYVILRYFNVAG  178 (328)
T ss_pred             HHHHH----hcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHh--ccCCCEEEEecCcccC
Confidence            88753    3345689999986543211           12367999999999999998765  2579999999999998


Q ss_pred             CC
Q psy3252         329 PG  330 (475)
Q Consensus       329 ~~  330 (475)
                      +.
T Consensus       179 ~~  180 (328)
T TIGR01179       179 AD  180 (328)
T ss_pred             CC
Confidence            74

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.55  E-value=2.5e-13  Score=138.78  Aligned_cols=164  Identities=18%  Similarity=0.167  Sum_probs=116.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ++||||||+|.||.+++++|+++ |++|++++|+........    ..                         ..+.++.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----~~-------------------------~~~~~~~   52 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----NH-------------------------PRMHFFE   52 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----cC-------------------------CCeEEEe
Confidence            47999999999999999999986 699999998764332111    00                         3477889


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++++.+.+.++++       .+|++||+|+...+..... ++   +..                     +++|+.++.
T Consensus        53 ~Dl~~~~~~~~~~~~-------~~d~ViH~aa~~~~~~~~~-~p---~~~---------------------~~~n~~~~~  100 (347)
T PRK11908         53 GDITINKEWIEYHVK-------KCDVILPLVAIATPATYVK-QP---LRV---------------------FELDFEANL  100 (347)
T ss_pred             CCCCCCHHHHHHHHc-------CCCEEEECcccCChHHhhc-Cc---HHH---------------------HHHHHHHHH
Confidence            999734454444332       6899999999753322111 11   122                     889999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccC------------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGI------------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                      ++++++..    .+ .++|++||...+...                  .....|+.||.+.+.+.+.++.+   +|+++.
T Consensus       101 ~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~  172 (347)
T PRK11908        101 PIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFT  172 (347)
T ss_pred             HHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeE
Confidence            98887653    33 589999997543210                  01236999999999988887654   688999


Q ss_pred             EEeCCCCCCCCC
Q psy3252         320 LCLPPDTDTPGF  331 (475)
Q Consensus       320 ~V~PG~v~T~~~  331 (475)
                      .+.|+.+.+|..
T Consensus       173 ilR~~~v~Gp~~  184 (347)
T PRK11908        173 LFRPFNWIGPGL  184 (347)
T ss_pred             EEeeeeeeCCCc
Confidence            999999998853

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.54  E-value=5e-13  Score=136.09  Aligned_cols=173  Identities=16%  Similarity=0.137  Sum_probs=116.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHH---HHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc-ceE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKL---LQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI-RFI  173 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v  173 (475)
                      +|+||||+|+||.+++++|+++|  ++|+++.|+.+..   +.+.+.+......                 ..... .++
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-----------------~~~~~~~~v   63 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLW-----------------QEDLARERI   63 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCC-----------------CchhhhCCE
Confidence            48999999999999999999999  7899999986532   2222222221100                 00000 368


Q ss_pred             EEEEeecCCCHHH-H-HHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         174 EYVSLDISKDYEN-I-RSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       174 ~~~~~Dvt~d~~~-v-~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .++.+|++ ++.- + ......+   ...+|++||||+.....    .   .++..                     +++
T Consensus        64 ~~~~~D~~-~~~~gl~~~~~~~~---~~~~d~vih~a~~~~~~----~---~~~~~---------------------~~~  111 (367)
T TIGR01746        64 EVVAGDLS-EPRLGLSDAEWERL---AENVDTIVHNGALVNWV----Y---PYSEL---------------------RAA  111 (367)
T ss_pred             EEEeCCcC-cccCCcCHHHHHHH---HhhCCEEEeCCcEeccC----C---cHHHH---------------------hhh
Confidence            88999998 5320 0 0111222   23799999999965321    1   12333                     789


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC----------------CChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY----------------GLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----------------~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                      |+.|+.++++.+..    .+..++|++||........                ....|+.||.+.+.+++.++.    .|
T Consensus       112 nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g  183 (367)
T TIGR01746       112 NVLGTREVLRLAAS----GRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RG  183 (367)
T ss_pred             hhHHHHHHHHHHhh----CCCceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cC
Confidence            99999999887653    3334699999987653311                124699999999988776543    48


Q ss_pred             cEEEEEeCCCCCCC
Q psy3252         316 LTITLCLPPDTDTP  329 (475)
Q Consensus       316 IrVn~V~PG~v~T~  329 (475)
                      ++++.+.||.+.++
T Consensus       184 ~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       184 LPVTIVRPGRILGN  197 (367)
T ss_pred             CCEEEECCCceeec
Confidence            99999999999986

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.53  E-value=2.5e-13  Score=130.00  Aligned_cols=163  Identities=23%  Similarity=0.334  Sum_probs=123.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      ||||||+|.||.+++++|+++|+.|+.+.|+..........                             .++.++.+|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~dl   51 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-----------------------------LNVEFVIGDL   51 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-----------------------------TTEEEEESET
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-----------------------------ceEEEEEeec
Confidence            68999999999999999999999988888776543222111                             2478899999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHH
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT  260 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~  260 (475)
                      . |.+.++++++..     .+|.+||+||....    ..+.+.....                     ++.|+.++.+++
T Consensus        52 ~-~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~---------------------~~~n~~~~~~ll  100 (236)
T PF01370_consen   52 T-DKEQLEKLLEKA-----NIDVVIHLAAFSSN----PESFEDPEEI---------------------IEANVQGTRNLL  100 (236)
T ss_dssp             T-SHHHHHHHHHHH-----TESEEEEEBSSSSH----HHHHHSHHHH---------------------HHHHHHHHHHHH
T ss_pred             c-cccccccccccc-----CceEEEEeeccccc----cccccccccc---------------------cccccccccccc
Confidence            9 999999998876     79999999996421    0111122222                     888988888888


Q ss_pred             HHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         261 KALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       261 ~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +++..    .+..++|++||...+...           .....|+.+|...+.+.+.+..+.   ++++..+.|+.+.+|
T Consensus       101 ~~~~~----~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~  173 (236)
T PF01370_consen  101 EAARE----AGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGP  173 (236)
T ss_dssp             HHHHH----HTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEEST
T ss_pred             ccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccc
Confidence            87753    344689999995443222           123569999999999998887763   899999999999999


Q ss_pred             C
Q psy3252         330 G  330 (475)
Q Consensus       330 ~  330 (475)
                      .
T Consensus       174 ~  174 (236)
T PF01370_consen  174 G  174 (236)
T ss_dssp             T
T ss_pred             c
Confidence            6

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.52  E-value=8.9e-13  Score=127.74  Aligned_cols=226  Identities=17%  Similarity=0.126  Sum_probs=152.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++|||||+|.||.+.++.++++..  +|+.++.-.  ..++.+. .+...                         .+..
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~-~~~~~-------------------------~~~~   54 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA-DVEDS-------------------------PRYR   54 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH-hhhcC-------------------------CCce
Confidence            3689999999999999999999875  467776521  1112211 11111                         4788


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +++.|+. |.+.+.+++++-     .+|++||-|+=+..    |-+..+-...                     +++|+.
T Consensus        55 fv~~DI~-D~~~v~~~~~~~-----~~D~VvhfAAESHV----DRSI~~P~~F---------------------i~TNv~  103 (340)
T COG1088          55 FVQGDIC-DRELVDRLFKEY-----QPDAVVHFAAESHV----DRSIDGPAPF---------------------IQTNVV  103 (340)
T ss_pred             EEecccc-CHHHHHHHHHhc-----CCCeEEEechhccc----cccccChhhh---------------------hhcchH
Confidence            9999999 988888887753     79999999986653    2232222333                     899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEecccccc-------------ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAAN-------------LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-------------~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      |++.+++++..+..+   -+++.||.-..+             .+..+.++|+||||+.++|+++..+-   +|+.++..
T Consensus       104 GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~T---Yglp~~It  177 (340)
T COG1088         104 GTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRT---YGLPATIT  177 (340)
T ss_pred             HHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHH---cCCceEEe
Confidence            999999999877643   258888873321             13345689999999999999999777   79999999


Q ss_pred             eCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChH
Q psy3252         322 LPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPE  401 (475)
Q Consensus       322 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e  401 (475)
                      .+.+-.+|-.....                .-|-.+.++    ++.    ..+|-+......+           .++-++
T Consensus       178 rcSNNYGPyqfpEK----------------lIP~~I~na----l~g----~~lpvYGdG~~iR-----------DWl~Ve  222 (340)
T COG1088         178 RCSNNYGPYQFPEK----------------LIPLMIINA----LLG----KPLPVYGDGLQIR-----------DWLYVE  222 (340)
T ss_pred             cCCCCcCCCcCchh----------------hhHHHHHHH----HcC----CCCceecCCccee-----------eeEEeH
Confidence            99999998322111                112222221    111    2222233222222           267899


Q ss_pred             HHHHHHHHHHhcCC--eeEEeCc
Q psy3252         402 VVAKQLLEDALKGN--YFSTVGL  422 (475)
Q Consensus       402 ~vA~~i~~ai~~g~--~~~~~~~  422 (475)
                      |=+++|-.-+.+|+  +.|-+|.
T Consensus       223 Dh~~ai~~Vl~kg~~GE~YNIgg  245 (340)
T COG1088         223 DHCRAIDLVLTKGKIGETYNIGG  245 (340)
T ss_pred             hHHHHHHHHHhcCcCCceEEeCC
Confidence            99999999999887  3444443

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.50  E-value=3e-13  Score=135.62  Aligned_cols=160  Identities=23%  Similarity=0.226  Sum_probs=111.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      ||||||+|.||.+++++|+++|++|+++.|+........                                  ....+|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~----------------------------------~~~~~~~   47 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV----------------------------------NLVDLDI   47 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH----------------------------------hhhhhhh
Confidence            799999999999999999999997666555433211100                                  0123566


Q ss_pred             CCCHHHHHHHHHHHHH--hcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         181 SKDYENIRSALQPAMD--RCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~--~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      + |..+.+.+++.+.+  .++++|+|||+||.....   ....   +..                     +++|+.++.+
T Consensus        48 ~-d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~---~~~~---~~~---------------------~~~n~~~t~~   99 (308)
T PRK11150         48 A-DYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTT---EWDG---KYM---------------------MDNNYQYSKE   99 (308)
T ss_pred             h-hhhhHHHHHHHHhcccccCCccEEEECceecCCc---CCCh---HHH---------------------HHHHHHHHHH
Confidence            6 65555555555542  346799999999864321   1111   123                     8899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++++..    .+ .++|++||...+...           .+...|+.||.+.+.+++.++.+   .++++..+.|+.|.
T Consensus       100 ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vy  171 (308)
T PRK11150        100 LLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVY  171 (308)
T ss_pred             HHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeec
Confidence            9888743    33 369999997543211           12357999999999988877654   57999999999999


Q ss_pred             CCC
Q psy3252         328 TPG  330 (475)
Q Consensus       328 T~~  330 (475)
                      +|.
T Consensus       172 G~~  174 (308)
T PRK11150        172 GPR  174 (308)
T ss_pred             CCC
Confidence            985

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.50  E-value=5.6e-13  Score=147.66  Aligned_cols=165  Identities=15%  Similarity=0.087  Sum_probs=119.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++++||||||+|.||.+++++|+++ |++|+.++|+.......    ..   .                      .+++
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~~---~----------------------~~~~  363 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----LG---H----------------------PRFH  363 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----cC---C----------------------CceE
Confidence            35789999999999999999999986 79999999976432211    00   0                      3577


Q ss_pred             EEEeecCCCHHH-HHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYEN-IRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~-v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++ ++++++       .+|++||+|+......... .+   ...                     +++|+
T Consensus       364 ~~~gDl~-d~~~~l~~~l~-------~~D~ViHlAa~~~~~~~~~-~~---~~~---------------------~~~Nv  410 (660)
T PRK08125        364 FVEGDIS-IHSEWIEYHIK-------KCDVVLPLVAIATPIEYTR-NP---LRV---------------------FELDF  410 (660)
T ss_pred             EEecccc-CcHHHHHHHhc-------CCCEEEECccccCchhhcc-CH---HHH---------------------HHhhH
Confidence            8899999 6443 333332       6899999999764322111 11   122                     88999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccC---------------C---CChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGI---------------Y---GLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------------~---~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                      .++.++++++...    + .++|++||...+-..               +   ....|+.||.+.+.+++.++.+   +|
T Consensus       411 ~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g  482 (660)
T PRK08125        411 EENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EG  482 (660)
T ss_pred             HHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cC
Confidence            9999999887642    3 579999996433110               1   1236999999999998887655   58


Q ss_pred             cEEEEEeCCCCCCCC
Q psy3252         316 LTITLCLPPDTDTPG  330 (475)
Q Consensus       316 IrVn~V~PG~v~T~~  330 (475)
                      +++..+.|+.|.+|.
T Consensus       483 ~~~~ilR~~~vyGp~  497 (660)
T PRK08125        483 LRFTLFRPFNWMGPR  497 (660)
T ss_pred             CceEEEEEceeeCCC
Confidence            999999999999985

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.49  E-value=1.7e-12  Score=126.38  Aligned_cols=159  Identities=18%  Similarity=0.223  Sum_probs=117.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|-||.+++..|++.|++|+++|.....-.+....+                             .+.++..|
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----------------------------~~~f~~gD   52 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----------------------------QFKFYEGD   52 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----------------------------cCceEEec
Confidence            6999999999999999999999999999998654433332211                             14689999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      +. |.+.+.+++++-     .||.+||.||....+...+.+.+    .                     ++-|+.|++.|
T Consensus        53 i~-D~~~L~~vf~~~-----~idaViHFAa~~~VgESv~~Pl~----Y---------------------y~NNv~gTl~L  101 (329)
T COG1087          53 LL-DRALLTAVFEEN-----KIDAVVHFAASISVGESVQNPLK----Y---------------------YDNNVVGTLNL  101 (329)
T ss_pred             cc-cHHHHHHHHHhc-----CCCEEEECccccccchhhhCHHH----H---------------------HhhchHhHHHH
Confidence            99 988888887764     89999999998755433333322    2                     88999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCC------------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIY------------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++++    ++.+-.+|||-||.+ .++.|            ...+|+.||.+++.+.+.++..   ++.++.++.=-++
T Consensus       102 l~am----~~~gv~~~vFSStAa-vYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a---~~~~~v~LRYFN~  172 (329)
T COG1087         102 IEAM----LQTGVKKFIFSSTAA-VYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKA---NPFKVVILRYFNV  172 (329)
T ss_pred             HHHH----HHhCCCEEEEecchh-hcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHh---CCCcEEEEEeccc
Confidence            8875    444555677766654 33433            3458999999999999888876   4566666653333

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.48  E-value=7.5e-12  Score=126.42  Aligned_cols=226  Identities=13%  Similarity=0.076  Sum_probs=140.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||+|.||.+++++|+++|++|++++|+.++....    ..                          ..++++.+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~--------------------------~~v~~v~~D   51 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE--------------------------WGAELVYGD   51 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh--------------------------cCCEEEECC
Confidence            689999999999999999999999999999986543221    11                          236788999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++       .+|++||+++....      +..   ..                     .++|+.++.++
T Consensus        52 l~-d~~~l~~al~-------g~d~Vi~~~~~~~~------~~~---~~---------------------~~~~~~~~~~l   93 (317)
T CHL00194         52 LS-LPETLPPSFK-------GVTAIIDASTSRPS------DLY---NA---------------------KQIDWDGKLAL   93 (317)
T ss_pred             CC-CHHHHHHHHC-------CCCEEEECCCCCCC------Ccc---ch---------------------hhhhHHHHHHH
Confidence            99 8888776664       68999998764211      111   11                     67888898888


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCCc
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP  339 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~  339 (475)
                      ++++.    +.+-.++|++||..+..  .+...|..+|...+.+.+       ..|++++.+.|+.+...+.........
T Consensus        94 ~~aa~----~~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~~~~  160 (317)
T CHL00194         94 IEAAK----AAKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFFQGLISQYAIPIL  160 (317)
T ss_pred             HHHHH----HcCCCEEEEeccccccc--cCCChHHHHHHHHHHHHH-------HcCCCeEEEeecHHhhhhhhhhhhhhc
Confidence            88764    33445899999864321  234568889988766542       368999999998665432211110000


Q ss_pred             cccccc--c--ccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhcCC
Q psy3252         340 RETSLI--S--QTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALKGN  415 (475)
Q Consensus       340 ~~~~~~--~--~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~  415 (475)
                      ......  .  ........+|++++.+.++.. +. .. ++           ...+. ++..++..++++.+.+.+.+..
T Consensus       161 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~-~~-~~-~~-----------~~ni~-g~~~~s~~el~~~~~~~~g~~~  225 (317)
T CHL00194        161 EKQPIWITNESTPISYIDTQDAAKFCLKSLSL-PE-TK-NK-----------TFPLV-GPKSWNSSEIISLCEQLSGQKA  225 (317)
T ss_pred             cCCceEecCCCCccCccCHHHHHHHHHHHhcC-cc-cc-Cc-----------EEEec-CCCccCHHHHHHHHHHHhCCCC
Confidence            000000  0  001234558888876654432 11 10 11           11111 1235788999998888876554


Q ss_pred             eeEEeC
Q psy3252         416 YFSTVG  421 (475)
Q Consensus       416 ~~~~~~  421 (475)
                      ....++
T Consensus       226 ~~~~vp  231 (317)
T CHL00194        226 KISRVP  231 (317)
T ss_pred             eEEeCC
Confidence            444444

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.47  E-value=1.5e-12  Score=130.13  Aligned_cols=164  Identities=23%  Similarity=0.259  Sum_probs=120.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .||||||+|.||.+++++|.++|++|+.++|.........                               ..+.++.+|
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------------------------~~~~~~~~d   50 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------------------------------SGVEFVVLD   50 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------------------------------cccceeeec
Confidence            3899999999999999999999999999999765433211                               235678999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCc-cEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPV-YMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~I-DvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      ++ +.+.+..+++       .. |++||+|+..........   +....                     +++|+.++.+
T Consensus        51 ~~-~~~~~~~~~~-------~~~d~vih~aa~~~~~~~~~~---~~~~~---------------------~~~nv~gt~~   98 (314)
T COG0451          51 LT-DRDLVDELAK-------GVPDAVIHLAAQSSVPDSNAS---DPAEF---------------------LDVNVDGTLN   98 (314)
T ss_pred             cc-chHHHHHHHh-------cCCCEEEEccccCchhhhhhh---CHHHH---------------------HHHHHHHHHH
Confidence            99 7644444443       33 999999998643221111   11222                     8899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccC-----------CCC--hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGI-----------YGL--AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~--~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      +++++..    .+..++|+.||.+...+.           +..  ..|+.||.+.+.+++....   .+|+.+..+.|+.
T Consensus        99 ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~  171 (314)
T COG0451          99 LLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFN  171 (314)
T ss_pred             HHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeee
Confidence            9998865    355679997775544322           111  1499999999999988887   5789999999999


Q ss_pred             CCCCCCcc
Q psy3252         326 TDTPGFEN  333 (475)
Q Consensus       326 v~T~~~~~  333 (475)
                      +..|....
T Consensus       172 vyGp~~~~  179 (314)
T COG0451         172 VYGPGDKP  179 (314)
T ss_pred             eeCCCCCC
Confidence            99986443

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.47  E-value=8.9e-13  Score=139.12  Aligned_cols=166  Identities=18%  Similarity=0.142  Sum_probs=116.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.-++++||||||+|.||.+++++|+++|++|++++|......+   .+......                      .++
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~----------------------~~~  169 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSN----------------------PNF  169 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccC----------------------Cce
Confidence            34467899999999999999999999999999999875322111   11110000                      346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++..|+. +..     +       ..+|+|||+|+...+.... .++   ...                     +++|+
T Consensus       170 ~~i~~D~~-~~~-----l-------~~~D~ViHlAa~~~~~~~~-~~p---~~~---------------------~~~Nv  211 (442)
T PLN02206        170 ELIRHDVV-EPI-----L-------LEVDQIYHLACPASPVHYK-FNP---VKT---------------------IKTNV  211 (442)
T ss_pred             EEEECCcc-Chh-----h-------cCCCEEEEeeeecchhhhh-cCH---HHH---------------------HHHHH
Confidence            77888988 532     1       1589999999865332111 111   222                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccccc----------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcE
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLG----------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLT  317 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~----------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIr  317 (475)
                      .|+.++++++..    .+ .++|++||...+..                ......|+.||.+.+.++..+...   +|++
T Consensus       212 ~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~  283 (442)
T PLN02206        212 VGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVE  283 (442)
T ss_pred             HHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCC
Confidence            999999988753    23 37999999764421                112357999999999888776554   5799


Q ss_pred             EEEEeCCCCCCCC
Q psy3252         318 ITLCLPPDTDTPG  330 (475)
Q Consensus       318 Vn~V~PG~v~T~~  330 (475)
                      +..+.|+.|.+|.
T Consensus       284 ~~ilR~~~vyGp~  296 (442)
T PLN02206        284 VRIARIFNTYGPR  296 (442)
T ss_pred             eEEEEeccccCCC
Confidence            9999999999885

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.47  E-value=1.4e-12  Score=134.84  Aligned_cols=165  Identities=15%  Similarity=0.076  Sum_probs=118.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++++||||||+|.||.++++.|.++|++|++++|......      ... .                       ....++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~-~-----------------------~~~~~~   69 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED-M-----------------------FCHEFH   69 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc-c-----------------------ccceEE
Confidence            5689999999999999999999999999999998643110      000 0                       124567


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.+.+..+++       .+|+|||+|+...........   ....                     +..|+.++
T Consensus        70 ~~Dl~-d~~~~~~~~~-------~~D~Vih~Aa~~~~~~~~~~~---~~~~---------------------~~~N~~~t  117 (370)
T PLN02695         70 LVDLR-VMENCLKVTK-------GVDHVFNLAADMGGMGFIQSN---HSVI---------------------MYNNTMIS  117 (370)
T ss_pred             ECCCC-CHHHHHHHHh-------CCCEEEEcccccCCccccccC---chhh---------------------HHHHHHHH
Confidence            89999 8776665543       589999999864322111111   1112                     67899999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccc-----------------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANL-----------------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                      .++++++.    +.+..++|++||...+-                 +......|+.+|.+.+.+++.++..   +|+++.
T Consensus       118 ~nll~aa~----~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~  190 (370)
T PLN02695        118 FNMLEAAR----INGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECR  190 (370)
T ss_pred             HHHHHHHH----HhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEE
Confidence            99988764    33446899999964321                 1223458999999999998887654   589999


Q ss_pred             EEeCCCCCCCC
Q psy3252         320 LCLPPDTDTPG  330 (475)
Q Consensus       320 ~V~PG~v~T~~  330 (475)
                      .+.|+.|.+|.
T Consensus       191 ilR~~~vyGp~  201 (370)
T PLN02695        191 IGRFHNIYGPF  201 (370)
T ss_pred             EEEECCccCCC
Confidence            99999999984

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.47  E-value=3.3e-12  Score=126.48  Aligned_cols=142  Identities=19%  Similarity=0.219  Sum_probs=107.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      +|||||+|.||.+++++|+++|++|++++|+                                             .+|+
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------------------------------~~d~   36 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------------------------------QLDL   36 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------------------------------ccCC
Confidence            7999999999999999999999999999874                                             1478


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHH
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT  260 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~  260 (475)
                      . +.+++.++++..     .+|++||+||.......    ....+..                     +++|+.++.+++
T Consensus        37 ~-~~~~~~~~~~~~-----~~d~vi~~a~~~~~~~~----~~~~~~~---------------------~~~n~~~~~~l~   85 (287)
T TIGR01214        37 T-DPEALERLLRAI-----RPDAVVNTAAYTDVDGA----ESDPEKA---------------------FAVNALAPQNLA   85 (287)
T ss_pred             C-CHHHHHHHHHhC-----CCCEEEECCcccccccc----ccCHHHH---------------------HHHHHHHHHHHH
Confidence            8 888888877643     58999999997532111    1112223                     889999999999


Q ss_pred             HHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         261 KALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       261 ~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +++..    .+ .++|++||...+.+           ......|+.+|.+.+.+++.+       +.++..+.|+.|.++
T Consensus        86 ~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~  153 (287)
T TIGR01214        86 RAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGG  153 (287)
T ss_pred             HHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccC
Confidence            88643    23 47999999654321           112458999999988887654       468899999999988


Q ss_pred             C
Q psy3252         330 G  330 (475)
Q Consensus       330 ~  330 (475)
                      .
T Consensus       154 ~  154 (287)
T TIGR01214       154 G  154 (287)
T ss_pred             C
Confidence            4

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.44  E-value=2.1e-12  Score=136.07  Aligned_cols=164  Identities=18%  Similarity=0.140  Sum_probs=114.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      -+.++|+||||+|.||.+++++|+++|++|++++|...........+.   ..                      .++.+
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~~----------------------~~~~~  172 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---GN----------------------PRFEL  172 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---cC----------------------CceEE
Confidence            345689999999999999999999999999999986322111111110   00                      24677


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +..|+. +..     +       ..+|+|||+|+........ .++   ...                     +++|+.|
T Consensus       173 ~~~Di~-~~~-----~-------~~~D~ViHlAa~~~~~~~~-~~p---~~~---------------------~~~Nv~g  214 (436)
T PLN02166        173 IRHDVV-EPI-----L-------LEVDQIYHLACPASPVHYK-YNP---VKT---------------------IKTNVMG  214 (436)
T ss_pred             EECccc-ccc-----c-------cCCCEEEECceeccchhhc-cCH---HHH---------------------HHHHHHH
Confidence            888887 531     1       2589999999865332211 122   222                     8899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEecccccccc----------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLG----------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~----------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                      +.++++++...    + .++|++||...+-.                ......|+.||.+.+.+++.+...   .|+++.
T Consensus       215 T~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~  286 (436)
T PLN02166        215 TLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVR  286 (436)
T ss_pred             HHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeE
Confidence            99999887542    2 37999999754321                112356999999999988877554   579999


Q ss_pred             EEeCCCCCCCC
Q psy3252         320 LCLPPDTDTPG  330 (475)
Q Consensus       320 ~V~PG~v~T~~  330 (475)
                      .+.|+.|.+|.
T Consensus       287 ilR~~~vYGp~  297 (436)
T PLN02166        287 IARIFNTYGPR  297 (436)
T ss_pred             EEEEccccCCC
Confidence            99999999985

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.44  E-value=5.2e-12  Score=140.21  Aligned_cols=172  Identities=13%  Similarity=0.123  Sum_probs=121.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc--CCEEEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .++|+||||||+|.||.+++++|+++  |++|++++|..  +.+..+.    ....                      ..
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~----~~~~----------------------~~   57 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLN----PSKS----------------------SP   57 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhh----hccc----------------------CC
Confidence            34679999999999999999999998  67899888752  1221111    1000                      03


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.+.+..++..     ..+|+|||+|+.......    ..+....                     +++
T Consensus        58 ~v~~~~~Dl~-d~~~~~~~~~~-----~~~D~ViHlAa~~~~~~~----~~~~~~~---------------------~~~  106 (668)
T PLN02260         58 NFKFVKGDIA-SADLVNYLLIT-----EGIDTIMHFAAQTHVDNS----FGNSFEF---------------------TKN  106 (668)
T ss_pred             CeEEEECCCC-ChHHHHHHHhh-----cCCCEEEECCCccCchhh----hhCHHHH---------------------HHH
Confidence            5788999999 87776655432     379999999997532111    1111122                     789


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc--------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcE
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG--------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLT  317 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~--------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIr  317 (475)
                      |+.|+.++++++...   ....++|++||...+-.              ......|+.||.+.+.+++.++.+   ++++
T Consensus       107 Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~  180 (668)
T PLN02260        107 NIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLP  180 (668)
T ss_pred             HHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCC
Confidence            999999998876431   12468999999654311              112357999999999999887665   5899


Q ss_pred             EEEEeCCCCCCCC
Q psy3252         318 ITLCLPPDTDTPG  330 (475)
Q Consensus       318 Vn~V~PG~v~T~~  330 (475)
                      +.++.|+.|.+|.
T Consensus       181 ~vilR~~~VyGp~  193 (668)
T PLN02260        181 VITTRGNNVYGPN  193 (668)
T ss_pred             EEEECcccccCcC
Confidence            9999999999984

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.42  E-value=3.3e-12  Score=127.51  Aligned_cols=148  Identities=14%  Similarity=0.082  Sum_probs=108.0

Q ss_pred             EEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeecC
Q psy3252         102 SVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDIS  181 (475)
Q Consensus       102 LITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dvt  181 (475)
                      |||||+|.||.++++.|+++|++|+++.+.                                            ..+|++
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------------------------------~~~Dl~   36 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------------------------------KELDLT   36 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------------------------------ccCCCC
Confidence            699999999999999999999988765321                                            136898


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHH
Q psy3252         182 KDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTK  261 (475)
Q Consensus       182 ~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~  261 (475)
                       +.+++.++++..     .+|++||+|+...........+   ...                     +++|+.++.++++
T Consensus        37 -~~~~l~~~~~~~-----~~d~Vih~A~~~~~~~~~~~~~---~~~---------------------~~~n~~~~~~ll~   86 (306)
T PLN02725         37 -RQADVEAFFAKE-----KPTYVILAAAKVGGIHANMTYP---ADF---------------------IRENLQIQTNVID   86 (306)
T ss_pred             -CHHHHHHHHhcc-----CCCEEEEeeeeecccchhhhCc---HHH---------------------HHHHhHHHHHHHH
Confidence             888887776652     6899999999742111011111   112                     7899999999988


Q ss_pred             HHHHHHHhCCCCeEEEeccccccccC----------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         262 ALVEGMKQRGRGCIVITASQAANLGI----------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       262 ~~lp~m~~~~~g~IV~iSS~a~~~~~----------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      ++..    .+..++|++||...+.+.                |....|+.||.+.+.+.+.+..+   .++++..+.|+.
T Consensus        87 ~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~  159 (306)
T PLN02725         87 AAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTN  159 (306)
T ss_pred             HHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHH---hCCCEEEEEecc
Confidence            8753    344689999996543211                11225999999999888877655   479999999999


Q ss_pred             CCCCC
Q psy3252         326 TDTPG  330 (475)
Q Consensus       326 v~T~~  330 (475)
                      |.+|.
T Consensus       160 vyG~~  164 (306)
T PLN02725        160 LYGPH  164 (306)
T ss_pred             eeCCC
Confidence            99985

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.42  E-value=2.3e-11  Score=120.27  Aligned_cols=264  Identities=16%  Similarity=0.138  Sum_probs=182.0

Q ss_pred             CEEEEecC-CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGG-SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGa-s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .+|||.|. +.-|++.+|..|-++|+-|+++..+.++.+.+..+-    .                       ..+....
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~----~-----------------------~dI~~L~   56 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED----R-----------------------PDIRPLW   56 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc----C-----------------------CCCCCcc
Confidence            48899996 799999999999999999999999987655443321    0                       3466677


Q ss_pred             eecCCCHHHHHHHHHHHHHhcC--------------CccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhc
Q psy3252         178 LDISKDYENIRSALQPAMDRCG--------------PVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLAL  242 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g--------------~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
                      .|.. +..++...++++.+.+.              .+..+|..-... ..++++.++.+.|.+.               
T Consensus        57 ld~~-~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~---------------  120 (299)
T PF08643_consen   57 LDDS-DPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADE---------------  120 (299)
T ss_pred             cCCC-CCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHH---------------
Confidence            7886 66666666666665443              345555555544 3588999999999988               


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHhC--CCCeE-EEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         243 WRSWTVIDLNLYGTIHMTKALVEGMKQR--GRGCI-VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       243 ~~~~~v~~vN~~g~~~l~~~~lp~m~~~--~~g~I-V~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                            ++.|+.-++.+++.++|+|..+  .+.+| ++.-|+.+....|..+.-.+...++.+|+++|++|+.++||+|.
T Consensus       121 ------ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~  194 (299)
T PF08643_consen  121 ------LNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVT  194 (299)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceE
Confidence                  9999999999999999999982  23455 45568888899999999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCcccccCCcccc-----ccc-cccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccC
Q psy3252         320 LCLPPDTDTPGFENEEKSKPRET-----SLI-SQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQ  393 (475)
Q Consensus       320 ~V~PG~v~T~~~~~~~~~~~~~~-----~~~-~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  393 (475)
                      .|..|.++-..+.+.........     ..+ ...+-++.|......                     ....    ....
T Consensus       195 ~i~LG~l~i~~~~~~s~~~~~~~~~se~~~W~~~~r~lY~~~y~~~~---------------------~~~~----~~~~  249 (299)
T PF08643_consen  195 QIKLGNLDIGNFGQPSNYKYLSLAGSEVLAWTSIMRALYGPNYSSIQ---------------------SSAI----PAGS  249 (299)
T ss_pred             EEEeeeeccccCCCcccccccccCCCCcccCchhHHhhhchhHHHHH---------------------hhcc----CCCC
Confidence            99999998774422211111000     000 112223333322211                     0000    0000


Q ss_pred             C-CCCCChHHHHHHHHHHHhcC--CeeEEeCchhHHHHHHhcCCcch
Q psy3252         394 T-GGLYRPEVVAKQLLEDALKG--NYFSTVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       394 ~-~~~~~~e~vA~~i~~ai~~g--~~~~~~~~~~~~~~~~~~~~~P~  437 (475)
                      . ...-+..+.-..+.+++..+  ...+++|...+...+ +.+++|.
T Consensus       250 ~~~~Gs~lr~L~~~vfd~~~~~~~~~v~y~G~Gs~~Y~~-ig~~~P~  295 (299)
T PF08643_consen  250 GRGKGSSLRELHNAVFDALYGSSKGSVVYVGRGSRIYDW-IGRWLPE  295 (299)
T ss_pred             CCCCCCHHHHHHHHHHHhhcCCCCCCEEEEcCceeHHHH-HHHHcCc
Confidence            1 12456788888888888833  366777876665554 5678883

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.38  E-value=9.3e-12  Score=124.69  Aligned_cols=162  Identities=15%  Similarity=0.116  Sum_probs=111.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ||||||+|.||.++++.|.++|+ .|++++|..... .    +...                         . ...+..|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~----~~~~-------------------------~-~~~~~~d   49 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K----FLNL-------------------------A-DLVIADY   49 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h----hhhh-------------------------h-heeeecc
Confidence            58999999999999999999998 788888754321 1    1100                         0 1235677


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      +. +.+.++.+.+.   .++++|++||+||....      +.++.+..                     +++|+.++.++
T Consensus        50 ~~-~~~~~~~~~~~---~~~~~D~vvh~A~~~~~------~~~~~~~~---------------------~~~n~~~~~~l   98 (314)
T TIGR02197        50 ID-KEDFLDRLEKG---AFGKIEAIFHQGACSDT------TETDGEYM---------------------MENNYQYSKRL   98 (314)
T ss_pred             Cc-chhHHHHHHhh---ccCCCCEEEECccccCc------cccchHHH---------------------HHHHHHHHHHH
Confidence            87 76665554442   34689999999996421      11222333                     88999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++++..    .+ .++|++||...+-.           ......|+.||.+.+.+++....+ ...++++..+.|+.|.+
T Consensus        99 l~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~~lR~~~vyG  172 (314)
T TIGR02197        99 LDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLP-EALSAQVVGLRYFNVYG  172 (314)
T ss_pred             HHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHh-hccCCceEEEEEeeccC
Confidence            988754    23 47999999654321           113568999999999988763322 12357899999999998


Q ss_pred             CC
Q psy3252         329 PG  330 (475)
Q Consensus       329 ~~  330 (475)
                      |.
T Consensus       173 ~~  174 (314)
T TIGR02197       173 PR  174 (314)
T ss_pred             CC
Confidence            85

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1371|consensus

Probab=99.34  E-value=2.5e-11  Score=119.27  Aligned_cols=166  Identities=19%  Similarity=0.229  Sum_probs=122.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++||||||+|-||.+.+.+|.++|+.|+++|.-..........++.....                     ...+.++.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~---------------------~~~v~f~~   60 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGE---------------------GKSVFFVE   60 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCC---------------------CCceEEEE
Confidence            578999999999999999999999999999986443333333334333221                     15799999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      .|+. |.+.+++++++.     .+|.|+|-|+....+...+.+    ...                     .+.|+.|++
T Consensus        61 ~Dl~-D~~~L~kvF~~~-----~fd~V~Hfa~~~~vgeS~~~p----~~Y---------------------~~nNi~gtl  109 (343)
T KOG1371|consen   61 GDLN-DAEALEKLFSEV-----KFDAVMHFAALAAVGESMENP----LSY---------------------YHNNIAGTL  109 (343)
T ss_pred             eccC-CHHHHHHHHhhc-----CCceEEeehhhhccchhhhCc----hhh---------------------eehhhhhHH
Confidence            9999 999999998876     699999999987654333322    222                     889999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccc-----------cCC-CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANL-----------GIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------~~~-~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      +++...    ++.+...+|+.||..-+-           +.. +...|+.+|.+++...+.+..-+.   ..+..+.
T Consensus       110 nlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~---~~~~~LR  179 (343)
T KOG1371|consen  110 NLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG---WKVTGLR  179 (343)
T ss_pred             HHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc---ceEEEEE
Confidence            987764    555567799998865432           111 457899999999999988877643   4444444

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.34  E-value=1.1e-11  Score=124.31  Aligned_cols=146  Identities=16%  Similarity=0.097  Sum_probs=105.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|.||.+++++|+++| +|+.++|...                                         .+..|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------------------------------~~~~D   39 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------------------------------DYCGD   39 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------------------------------cccCC
Confidence            69999999999999999999999 7888887521                                         13479


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+.+.++++..     ++|++||+|+........+ .+   +..                     +++|+.++.++
T Consensus        40 l~-d~~~~~~~~~~~-----~~D~Vih~Aa~~~~~~~~~-~~---~~~---------------------~~~N~~~~~~l   88 (299)
T PRK09987         40 FS-NPEGVAETVRKI-----RPDVIVNAAAHTAVDKAES-EP---EFA---------------------QLLNATSVEAI   88 (299)
T ss_pred             CC-CHHHHHHHHHhc-----CCCEEEECCccCCcchhhc-CH---HHH---------------------HHHHHHHHHHH
Confidence            99 988888877643     6899999999764322111 11   112                     78999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++++...    + .++|++||...+-+           ..+...|+.||.+.+.+++....       +...+.|+++.+
T Consensus        89 ~~aa~~~----g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyG  156 (299)
T PRK09987         89 AKAANEV----G-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCA-------KHLIFRTSWVYA  156 (299)
T ss_pred             HHHHHHc----C-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CEEEEecceecC
Confidence            9887542    2 47999998643311           11235799999999888765422       347788888888


Q ss_pred             CC
Q psy3252         329 PG  330 (475)
Q Consensus       329 ~~  330 (475)
                      |.
T Consensus       157 p~  158 (299)
T PRK09987        157 GK  158 (299)
T ss_pred             CC
Confidence            74

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.33  E-value=6.2e-11  Score=109.51  Aligned_cols=141  Identities=23%  Similarity=0.290  Sum_probs=106.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      |+|+||+|.+|..++++|+++|++|+++.|++++.++        .                        ..++++.+|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~------------------------~~~~~~~~d~   48 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------S------------------------PGVEIIQGDL   48 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------C------------------------TTEEEEESCT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------c------------------------cccccceeee
Confidence            6899999999999999999999999999999987765        1                        5688999999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHH
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT  260 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~  260 (475)
                      . |.+++.++++       +.|++|+++|....         +                                 ...+
T Consensus        49 ~-d~~~~~~al~-------~~d~vi~~~~~~~~---------~---------------------------------~~~~   78 (183)
T PF13460_consen   49 F-DPDSVKAALK-------GADAVIHAAGPPPK---------D---------------------------------VDAA   78 (183)
T ss_dssp             T-CHHHHHHHHT-------TSSEEEECCHSTTT---------H---------------------------------HHHH
T ss_pred             h-hhhhhhhhhh-------hcchhhhhhhhhcc---------c---------------------------------cccc
Confidence            9 9877777665       79999999975422         1                                 1233


Q ss_pred             HHHHHHHHhCCCCeEEEeccccccccCCC---------ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         261 KALVEGMKQRGRGCIVITASQAANLGIYG---------LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       261 ~~~lp~m~~~~~g~IV~iSS~a~~~~~~~---------~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +.++..+.+.+..++|++||.......+.         ...|...|...+.+.       ...+++...+.||.+.++.
T Consensus        79 ~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~  150 (183)
T PF13460_consen   79 KNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEAL-------RESGLNWTIVRPGWIYGNP  150 (183)
T ss_dssp             HHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTT
T ss_pred             ccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCC
Confidence            45555566667779999999876554333         135666665554333       3458999999999988873

...

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.8e-10  Score=127.45  Aligned_cols=164  Identities=15%  Similarity=0.128  Sum_probs=112.2

Q ss_pred             EEEEecCCChHHHHHHHHHH--HcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAA--KRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La--~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +||||||+|.||.+++++|+  ..|++|++++|+... .... .+......                      .++.++.
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~-~~~~~~~~----------------------~~v~~~~   57 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLE-ALAAYWGA----------------------DRVVPLV   57 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHH-HHHHhcCC----------------------CcEEEEe
Confidence            69999999999999999999  589999999996532 1111 11111100                      3578899


Q ss_pred             eecCCCHHH--HHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         178 LDISKDYEN--IRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       178 ~Dvt~d~~~--v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +|++ |.+.  ....++.+    ..+|++||+||.....    .+.   ...                     .++|+.|
T Consensus        58 ~Dl~-~~~~~~~~~~~~~l----~~~D~Vih~Aa~~~~~----~~~---~~~---------------------~~~nv~g  104 (657)
T PRK07201         58 GDLT-EPGLGLSEADIAEL----GDIDHVVHLAAIYDLT----ADE---EAQ---------------------RAANVDG  104 (657)
T ss_pred             cccC-CccCCcCHHHHHHh----cCCCEEEECceeecCC----CCH---HHH---------------------HHHHhHH
Confidence            9999 6321  01112222    4799999999965321    111   222                     7899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccC-------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGI-------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      +.++++++.    +.+..++|++||...+...             .....|+.||...+.+.+.      ..|+++..+.
T Consensus       105 t~~ll~~a~----~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilR  174 (657)
T PRK07201        105 TRNVVELAE----RLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYR  174 (657)
T ss_pred             HHHHHHHHH----hcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEc
Confidence            988888764    3345689999997653211             1235699999999988653      3589999999


Q ss_pred             CCCCCCCC
Q psy3252         323 PPDTDTPG  330 (475)
Q Consensus       323 PG~v~T~~  330 (475)
                      |+.|.++.
T Consensus       175 p~~v~G~~  182 (657)
T PRK07201        175 PAVVVGDS  182 (657)
T ss_pred             CCeeeecC
Confidence            99999873

>PRK05865 hypothetical protein; Provisional

Probab=99.31  E-value=6.7e-11  Score=132.34  Aligned_cols=131  Identities=23%  Similarity=0.298  Sum_probs=103.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||+|+||.+++++|+++|++|++++|+....      +    .                       ..+.++.+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~-----------------------~~v~~v~gD   48 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----P-----------------------SSADFIAAD   48 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----c-----------------------cCceEEEee
Confidence            689999999999999999999999999999974321      0    0                       236688999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++       .+|++||||+....             .                     +++|+.++.++
T Consensus        49 L~-D~~~l~~al~-------~vD~VVHlAa~~~~-------------~---------------------~~vNv~GT~nL   86 (854)
T PRK05865         49 IR-DATAVESAMT-------GADVVAHCAWVRGR-------------N---------------------DHINIDGTANV   86 (854)
T ss_pred             CC-CHHHHHHHHh-------CCCEEEECCCcccc-------------h---------------------HHHHHHHHHHH
Confidence            99 9888877765       58999999985321             2                     77899998887


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++++    .+.+.++||++||..              |.+.+.+.+       .+|+++..+.|+.|.+|.
T Consensus        87 LeAa----~~~gvkr~V~iSS~~--------------K~aaE~ll~-------~~gl~~vILRp~~VYGP~  132 (854)
T PRK05865         87 LKAM----AETGTGRIVFTSSGH--------------QPRVEQMLA-------DCGLEWVAVRCALIFGRN  132 (854)
T ss_pred             HHHH----HHcCCCeEEEECCcH--------------HHHHHHHHH-------HcCCCEEEEEeceEeCCC
Confidence            6654    455567899999863              777776553       258999999999999984

>PLN02996 fatty acyl-CoA reductase

Probab=99.26  E-value=3.6e-10  Score=120.90  Aligned_cols=185  Identities=14%  Similarity=0.067  Sum_probs=116.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC---EEEEEecChhH---HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA---HVTIVARDEKK---LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga---~Vvl~~R~~~~---l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      ++||+|+||||||.||..++..|++.+.   +|+++.|....   .+.+..++....   .+.....   .....-....
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~---~f~~~~~---~~~~~~~~~~   82 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKD---LFKVLRE---KLGENLNSLI   82 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhch---HHHHHHH---hcchhhhhhh
Confidence            5799999999999999999999998653   67888886531   222221221100   0000000   0000000001


Q ss_pred             cceEEEEEeecCCCH-------HHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhc
Q psy3252         170 IRFIEYVSLDISKDY-------ENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLAL  242 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~-------~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
                      ..+++++.+|++ ++       +.++.+++       .+|++||+|+....   . .+   .+..               
T Consensus        83 ~~kv~~i~GDl~-~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---~-~~---~~~~---------------  132 (491)
T PLN02996         83 SEKVTPVPGDIS-YDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---D-ER---YDVA---------------  132 (491)
T ss_pred             hcCEEEEecccC-CcCCCCChHHHHHHHHh-------CCCEEEECccccCC---c-CC---HHHH---------------
Confidence            157899999998 42       22333332       69999999997532   1 12   2323               


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC---------C-------------------------
Q psy3252         243 WRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI---------Y-------------------------  288 (475)
Q Consensus       243 ~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------~-------------------------  288 (475)
                            +++|+.|+.++++++...   .+..++|++||...+-..         +                         
T Consensus       133 ------~~~Nv~gt~~ll~~a~~~---~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (491)
T PLN02996        133 ------LGINTLGALNVLNFAKKC---VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLK  203 (491)
T ss_pred             ------HHHHHHHHHHHHHHHHhc---CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHH
Confidence                  889999999999887532   123479999986543110         0                         


Q ss_pred             ----------------------------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         289 ----------------------------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       289 ----------------------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                                                  ....|+.||++.+.+++..    . .|+.+..+.|+.|.++.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~----~-~~lpv~i~RP~~V~G~~  268 (491)
T PLN02996        204 ELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF----K-ENLPLVIIRPTMITSTY  268 (491)
T ss_pred             HHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHh----c-CCCCEEEECCCEeccCC
Confidence                                        1135999999999888654    2 37999999999999985

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.24  E-value=5.6e-10  Score=103.45  Aligned_cols=84  Identities=27%  Similarity=0.423  Sum_probs=71.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||+ |+|.++++.|+++|++|++++|+.++++.+...+.. .                        .++.++.+|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~------------------------~~i~~~~~D   55 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-P------------------------ESITPLPLD   55 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-C------------------------CcEEEEEcc
Confidence            68999998 788889999999999999999998776665544432 1                        457889999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      ++ |.+++.++++.+.+.+|++|++|+..-.
T Consensus        56 v~-d~~sv~~~i~~~l~~~g~id~lv~~vh~   85 (177)
T PRK08309         56 YH-DDDALKLAIKSTIEKNGPFDLAVAWIHS   85 (177)
T ss_pred             CC-CHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence            99 9999999999999999999999977654

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.23  E-value=1.1e-10  Score=114.01  Aligned_cols=177  Identities=18%  Similarity=0.207  Sum_probs=97.9

Q ss_pred             EecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         103 VTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       103 ITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      ||||||.||.++..+|++++.  +|+++.|..+. +...+++.+........     .....     ....+++++.+|+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~-~~~~~rl~~~l~~~~~~-----~~~~~-----~~~~ri~~v~GDl   69 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS-QSALERLKDALKEYGLW-----DDLDK-----EALSRIEVVEGDL   69 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH-HHHHHHHHGGG-SS-HH-----HHH-H-----HHTTTEEEEE--T
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc-ccchhhhhhhcccccch-----hhhhh-----hhhccEEEEeccc
Confidence            799999999999999999987  99999997643 22233332221110000     00000     0116899999999


Q ss_pred             CCCHH-HH-HHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         181 SKDYE-NI-RSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       181 t~d~~-~v-~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      + ++. .+ ....+++.+   .+|++||||+......       .++..                     .++|+.|+.+
T Consensus        70 ~-~~~lGL~~~~~~~L~~---~v~~IiH~Aa~v~~~~-------~~~~~---------------------~~~NV~gt~~  117 (249)
T PF07993_consen   70 S-QPNLGLSDEDYQELAE---EVDVIIHCAASVNFNA-------PYSEL---------------------RAVNVDGTRN  117 (249)
T ss_dssp             T-SGGGG--HHHHHHHHH---H--EEEE--SS-SBS--------S--EE---------------------HHHHHHHHHH
T ss_pred             c-ccccCCChHHhhcccc---ccceeeecchhhhhcc-------cchhh---------------------hhhHHHHHHH
Confidence            9 532 11 111222222   5899999999653211       12222                     8899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccC--------------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGI--------------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--------------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                      +++.+.    +.+..+++++||.......                    .....|..||+..+.+.+..+.+   .|+.+
T Consensus       118 ll~la~----~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~  190 (249)
T PF07993_consen  118 LLRLAA----QGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPV  190 (249)
T ss_dssp             HHHHHT----SSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---E
T ss_pred             HHHHHH----hccCcceEEeccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceE
Confidence            999875    2233489999993221111                    11247999999999998887665   58999


Q ss_pred             EEEeCCCCCCC
Q psy3252         319 TLCLPPDTDTP  329 (475)
Q Consensus       319 n~V~PG~v~T~  329 (475)
                      ..+.||.|-+.
T Consensus       191 ~I~Rp~~i~g~  201 (249)
T PF07993_consen  191 TIYRPGIIVGD  201 (249)
T ss_dssp             EEEEE-EEE-S
T ss_pred             EEEecCccccc
Confidence            99999999874

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430|consensus

Probab=99.15  E-value=1e-09  Score=111.34  Aligned_cols=172  Identities=20%  Similarity=0.253  Sum_probs=119.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++.+++||||+|.||++++.+|.+.|  ..|.++|.....-. ..++.....                       ...+.
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~~-----------------------~~~v~   58 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGFR-----------------------SGRVT   58 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhccc-----------------------CCcee
Confidence            45699999999999999999999999  68999988753211 111111101                       16788


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|+. |..++..+++       .. .+||+|....+.-...    +-+..                     +++|+.
T Consensus        59 ~~~~D~~-~~~~i~~a~~-------~~-~Vvh~aa~~~~~~~~~----~~~~~---------------------~~vNV~  104 (361)
T KOG1430|consen   59 VILGDLL-DANSISNAFQ-------GA-VVVHCAASPVPDFVEN----DRDLA---------------------MRVNVN  104 (361)
T ss_pred             EEecchh-hhhhhhhhcc-------Cc-eEEEeccccCcccccc----chhhh---------------------eeecch
Confidence            9999999 8777776655       56 6777776543322211    22323                     899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEecccccccc------------CCC--ChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLG------------IYG--LAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------~~~--~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                      |+-+++.++.    +.+-.++|++||..-..+            .|.  ...|+.||+--+.+++....   ..+....+
T Consensus       105 gT~nvi~~c~----~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~a  177 (361)
T KOG1430|consen  105 GTLNVIEACK----ELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCA  177 (361)
T ss_pred             hHHHHHHHHH----HhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEE
Confidence            9888888774    445567999999765432            222  24899999977776655433   45688999


Q ss_pred             EeCCCCCCCCCcc
Q psy3252         321 CLPPDTDTPGFEN  333 (475)
Q Consensus       321 V~PG~v~T~~~~~  333 (475)
                      +.|..|.+|+-..
T Consensus       178 LR~~~IYGpgd~~  190 (361)
T KOG1430|consen  178 LRPPGIYGPGDKR  190 (361)
T ss_pred             EccccccCCCCcc
Confidence            9999999996443

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.13  E-value=3.2e-09  Score=105.29  Aligned_cols=217  Identities=12%  Similarity=0.028  Sum_probs=128.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||||.||.+++++|+++|++|.++.|+.++...                                 ..+..+.+|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------------------------------~~~~~~~~d   47 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------------------------------PNEKHVKFD   47 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------------------------------CCCcccccc
Confidence            37899999999999999999999999999999764310                                 124456789


Q ss_pred             cCCCHHHHHHHHHHHHHhcCC-ccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGP-VYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~-IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      +. |.+++..+++.. +.+.. +|.++++++...         +..+                                 
T Consensus        48 ~~-d~~~l~~a~~~~-~~~~g~~d~v~~~~~~~~---------~~~~---------------------------------   83 (285)
T TIGR03649        48 WL-DEDTWDNPFSSD-DGMEPEISAVYLVAPPIP---------DLAP---------------------------------   83 (285)
T ss_pred             CC-CHHHHHHHHhcc-cCcCCceeEEEEeCCCCC---------ChhH---------------------------------
Confidence            99 999998887643 22345 999999886321         0111                                 


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCCCCCCCcccc-c
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ-SGLTITLCLPPDTDTPGFENEE-K  336 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~-~gIrVn~V~PG~v~T~~~~~~~-~  336 (475)
                      ..+.++..+++.+-.+||++||.....+.+       ++..++.+.       .. .|+..+.+.|+++..++..... .
T Consensus        84 ~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~-------~~~~~~~~l-------~~~~gi~~tilRp~~f~~~~~~~~~~~  149 (285)
T TIGR03649        84 PMIKFIDFARSKGVRRFVLLSASIIEKGGP-------AMGQVHAHL-------DSLGGVEYTVLRPTWFMENFSEEFHVE  149 (285)
T ss_pred             HHHHHHHHHHHcCCCEEEEeeccccCCCCc-------hHHHHHHHH-------HhccCCCEEEEeccHHhhhhccccccc
Confidence            012234445566667899999865433211       222222222       22 4899999999988755422110 0


Q ss_pred             CCcccccccc----ccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh
Q psy3252         337 SKPRETSLIS----QTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       337 ~~~~~~~~~~----~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~  412 (475)
                      ..........    ...-+...+|++++...++.......   +           ...+. .+..++..++++.+-+.+.
T Consensus       150 ~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~---~-----------~~~l~-g~~~~s~~eia~~l~~~~g  214 (285)
T TIGR03649       150 AIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPN---T-----------DYVVL-GPELLTYDDVAEILSRVLG  214 (285)
T ss_pred             ccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCC---C-----------eEEee-CCccCCHHHHHHHHHHHhC
Confidence            0000000111    11236677888887766554311110   0           00111 1236788899988888876


Q ss_pred             cCCeeEEeCc
Q psy3252         413 KGNYFSTVGL  422 (475)
Q Consensus       413 ~g~~~~~~~~  422 (475)
                      +.-....+..
T Consensus       215 ~~v~~~~~~~  224 (285)
T TIGR03649       215 RKITHVKLTE  224 (285)
T ss_pred             CceEEEeCCH
Confidence            6544444443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.13  E-value=1.1e-10  Score=116.47  Aligned_cols=142  Identities=20%  Similarity=0.215  Sum_probs=98.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|-||.++.+.|.+.|++|+.++|+                                             .+|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------------------------------~~d   36 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------------------------------DLD   36 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------------------------------CS-
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------------------------------hcC
Confidence            68999999999999999999999999998775                                             258


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+.+.+++++.     ++|++||+||+......+..    -+..                     +.+|+.++.++
T Consensus        37 l~-d~~~~~~~~~~~-----~pd~Vin~aa~~~~~~ce~~----p~~a---------------------~~iN~~~~~~l   85 (286)
T PF04321_consen   37 LT-DPEAVAKLLEAF-----KPDVVINCAAYTNVDACEKN----PEEA---------------------YAINVDATKNL   85 (286)
T ss_dssp             TT-SHHHHHHHHHHH-------SEEEE------HHHHHHS----HHHH---------------------HHHHTHHHHHH
T ss_pred             CC-CHHHHHHHHHHh-----CCCeEeccceeecHHhhhhC----hhhh---------------------HHHhhHHHHHH
Confidence            88 989898888876     69999999997633222221    1111                     88999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++.+..     .+.++|++||..-+-+.           .....|+.+|...+...+..    .+   +...+.+|++..
T Consensus        86 a~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~----~~---~~~IlR~~~~~g  153 (286)
T PF04321_consen   86 AEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA----CP---NALILRTSWVYG  153 (286)
T ss_dssp             HHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEES
T ss_pred             HHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh----cC---CEEEEecceecc
Confidence            998743     23689999997654332           12468999999988876651    12   567778888877


Q ss_pred             C
Q psy3252         329 P  329 (475)
Q Consensus       329 ~  329 (475)
                      +
T Consensus       154 ~  154 (286)
T PF04321_consen  154 P  154 (286)
T ss_dssp             S
T ss_pred             c
Confidence            6

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.10  E-value=1.9e-09  Score=106.65  Aligned_cols=154  Identities=16%  Similarity=0.123  Sum_probs=91.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      ||||||+|.||.++++.|+++|++|++++|+........                               . .  ...|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------------------------~-~--~~~~~   46 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-------------------------------W-E--GYKPW   46 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-------------------------------c-e--eeecc
Confidence            589999999999999999999999999999875432110                               0 0  01122


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHH
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT  260 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~  260 (475)
                      . . ..+       .+.+..+|++||+||.....  .+.+.+.....                     +++|+.++.+++
T Consensus        47 ~-~-~~~-------~~~~~~~D~Vvh~a~~~~~~--~~~~~~~~~~~---------------------~~~n~~~~~~l~   94 (292)
T TIGR01777        47 A-P-LAE-------SEALEGADAVINLAGEPIAD--KRWTEERKQEI---------------------RDSRIDTTRALV   94 (292)
T ss_pred             c-c-cch-------hhhcCCCCEEEECCCCCccc--ccCCHHHHHHH---------------------HhcccHHHHHHH
Confidence            2 2 111       12335799999999964321  11222333333                     789999988888


Q ss_pred             HHHHHHHHhCCC-C-eEEEeccccccccCC------------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         261 KALVEGMKQRGR-G-CIVITASQAANLGIY------------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       261 ~~~lp~m~~~~~-g-~IV~iSS~a~~~~~~------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      +++..    .+. . .+|+.||.. ..+..            ....|+..+...+...    ..+...++.+..+.|+.+
T Consensus        95 ~a~~~----~~~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~----~~~~~~~~~~~ilR~~~v  165 (292)
T TIGR01777        95 EAIAA----AEQKPKVFISASAVG-YYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAA----QAAEDLGTRVVLLRTGIV  165 (292)
T ss_pred             HHHHh----cCCCceEEEEeeeEE-EeCCCCCCCcCcccCCCCCChHHHHHHHHHHHh----hhchhcCCceEEEeeeeE
Confidence            87643    332 2 344444432 22211            1112333333332222    223446899999999999


Q ss_pred             CCC
Q psy3252         327 DTP  329 (475)
Q Consensus       327 ~T~  329 (475)
                      .+|
T Consensus       166 ~G~  168 (292)
T TIGR01777       166 LGP  168 (292)
T ss_pred             ECC
Confidence            987

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.07  E-value=4.3e-10  Score=108.40  Aligned_cols=92  Identities=15%  Similarity=0.208  Sum_probs=74.0

Q ss_pred             CEEEEecC-CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGG-SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGa-s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .+=.||.. |||||+++|++|+++|++|+++++...        +..                          .  ....
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~--------------------------~--~~~~   58 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP--------------------------E--PHPN   58 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc--------------------------c--cCCc
Confidence            35567877 578999999999999999999876311        000                          0  0135


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHh
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVM  227 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~  227 (475)
                      +|++ +.+++.++++.+.+.++++|+||||||+....++.+.+.++|+++
T Consensus        59 ~Dv~-d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~  107 (227)
T TIGR02114        59 LSIR-EIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYMTDLEQVQAS  107 (227)
T ss_pred             ceee-cHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhhCCHHHHhhh
Confidence            8999 999999999999999999999999999987778888888888755

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.05  E-value=4.4e-09  Score=103.30  Aligned_cols=140  Identities=17%  Similarity=0.152  Sum_probs=105.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      +||||++|-+|.++++.|. .+..|+.++|.                                             .+|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~---------------------------------------------~~Di   36 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRA---------------------------------------------ELDI   36 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCc---------------------------------------------cccc
Confidence            8999999999999999998 67899988774                                             2799


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHH
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT  260 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~  260 (475)
                      + |.+.+.+++.+.     ++|++||+|++......+..    -+..                     +.+|..|+.+++
T Consensus        37 t-d~~~v~~~i~~~-----~PDvVIn~AAyt~vD~aE~~----~e~A---------------------~~vNa~~~~~lA   85 (281)
T COG1091          37 T-DPDAVLEVIRET-----RPDVVINAAAYTAVDKAESE----PELA---------------------FAVNATGAENLA   85 (281)
T ss_pred             c-ChHHHHHHHHhh-----CCCEEEECccccccccccCC----HHHH---------------------HHhHHHHHHHHH
Confidence            9 999999999887     89999999998754333322    2222                     899999999999


Q ss_pred             HHHHHHHHhCCCCeEEEeccccccccCC-----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         261 KALVEGMKQRGRGCIVITASQAANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       261 ~~~lp~m~~~~~g~IV~iSS~a~~~~~~-----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +++..     -+..+|++|+-.-+-|..           +...|+.||.+.+..++...       -+...|...++.+.
T Consensus        86 ~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~  153 (281)
T COG1091          86 RAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG-------PRHLILRTSWVYGE  153 (281)
T ss_pred             HHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC-------CCEEEEEeeeeecC
Confidence            98743     235799999865544322           34689999999888876643       23444555555554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.01  E-value=8.3e-09  Score=103.99  Aligned_cols=173  Identities=16%  Similarity=0.160  Sum_probs=117.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++++|||||.||..+..+|+.+- ++|++..|-.+ .+.+.++|.+....             ...+++.+..+++.+.
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s-~E~a~~RL~~~~~~-------------~~~~~e~~~~ri~vv~   66 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQS-DEAALARLEKTFDL-------------YRHWDELSADRVEVVA   66 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCC-HHHHHHHHHHHhhh-------------hhhhhhhhcceEEEEe
Confidence            479999999999999998888765 49999888543 23334444443220             0112334458899999


Q ss_pred             eecCC-----CHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         178 LDISK-----DYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       178 ~Dvt~-----d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .|+++     +....+.+.+       .+|.+||||+....  +  .+   ...+                     ...|
T Consensus        67 gDl~e~~lGL~~~~~~~La~-------~vD~I~H~gA~Vn~--v--~p---Ys~L---------------------~~~N  111 (382)
T COG3320          67 GDLAEPDLGLSERTWQELAE-------NVDLIIHNAALVNH--V--FP---YSEL---------------------RGAN  111 (382)
T ss_pred             cccccccCCCCHHHHHHHhh-------hcceEEecchhhcc--c--Cc---HHHh---------------------cCcc
Confidence            99983     2233333333       69999999986531  0  11   2222                     7889


Q ss_pred             HHHHHHHHHHHHHHHHhCCCC-eEEEeccccccccC--------------------CCChhhHHHHHHHHHHHHHHHHHH
Q psy3252         253 LYGTIHMTKALVEGMKQRGRG-CIVITASQAANLGI--------------------YGLAAYTSSKFALKGFAEALYMEV  311 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g-~IV~iSS~a~~~~~--------------------~~~~~Y~aSKaAl~~l~~sLa~El  311 (475)
                      +.|+..+++.+.     ++++ .+.+|||++.....                    .....|+-||++.+.+++.    -
T Consensus       112 VlGT~evlrLa~-----~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~----A  182 (382)
T COG3320         112 VLGTAEVLRLAA-----TGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVRE----A  182 (382)
T ss_pred             hHhHHHHHHHHh-----cCCCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHH----H
Confidence            999999988763     2333 48999997654321                    1125799999988877655    4


Q ss_pred             ccCCcEEEEEeCCCCCCC
Q psy3252         312 KQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       312 ~~~gIrVn~V~PG~v~T~  329 (475)
                      ...|++|..+.||+|-.+
T Consensus       183 ~~rGLpv~I~Rpg~I~gd  200 (382)
T COG3320         183 GDRGLPVTIFRPGYITGD  200 (382)
T ss_pred             hhcCCCeEEEecCeeecc
Confidence            456999999999999877

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.99  E-value=5.9e-08  Score=105.60  Aligned_cols=139  Identities=12%  Similarity=0.180  Sum_probs=86.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC---EEEEEecChhH---HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCC---
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA---HVTIVARDEKK---LLQAQEEIKKACPNPKFIRFIEYEEIKKACPN---  166 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga---~Vvl~~R~~~~---l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---  166 (475)
                      ++||+|+||||+|.||..++++|++.+.   +|+++.|....   .+.+.+++.+.   ..|      +......+.   
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~---~lf------~~l~~~~g~~~~  187 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDA---ELF------KCLQETHGKSYQ  187 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhh---hhH------HHHHHhcCcccc
Confidence            5799999999999999999999998764   67888886432   22222222110   000      011000000   


Q ss_pred             CCccceEEEEEeecCCCH------HHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchh
Q psy3252         167 PKFIRFIEYVSLDISKDY------ENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRL  240 (475)
Q Consensus       167 ~~~~~~v~~~~~Dvt~d~------~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (475)
                      .....++..+..|++ +.      +..+.+.    +   .+|++||+|+....    +   ++.+..             
T Consensus       188 ~~~~~Ki~~v~GDl~-d~~LGLs~~~~~~L~----~---~vDiVIH~AA~v~f----~---~~~~~a-------------  239 (605)
T PLN02503        188 SFMLSKLVPVVGNVC-ESNLGLEPDLADEIA----K---EVDVIINSAANTTF----D---ERYDVA-------------  239 (605)
T ss_pred             ccccccEEEEEeeCC-CcccCCCHHHHHHHH----h---cCCEEEECcccccc----c---cCHHHH-------------
Confidence            001257999999999 64      2233222    2   59999999997531    1   123333             


Q ss_pred             hccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEecccc
Q psy3252         241 ALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA  282 (475)
Q Consensus       241 ~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a  282 (475)
                              +++|+.|+.++++.+...   .+..++|++||..
T Consensus       240 --------~~vNV~GT~nLLelA~~~---~~lk~fV~vSTay  270 (605)
T PLN02503        240 --------IDINTRGPCHLMSFAKKC---KKLKLFLQVSTAY  270 (605)
T ss_pred             --------HHHHHHHHHHHHHHHHHc---CCCCeEEEccCce
Confidence                    889999999999887542   1224688888854

>KOG4022|consensus

Probab=98.98  E-value=6.1e-08  Score=86.43  Aligned_cols=182  Identities=19%  Similarity=0.160  Sum_probs=124.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      -.+|+|-||-|.+|.++...|-.+++-|.-++-.+..-.                                  ..-..+.
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----------------------------------d~sI~V~   48 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----------------------------------DSSILVD   48 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----------------------------------cceEEec
Confidence            357899999999999999999999999988876543110                                  1122333


Q ss_pred             eecCCCHHHHHHHHHHHHHhcC--CccEEEEccccccCCCcccCC-HHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCG--PVYMLVNCAGMALCGTLEEMT-MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g--~IDvLVnnAG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      .|-+ =.++-+.+.+++-+..+  ++|.+++-||....+....-+ ...-+-+                     +.-.+.
T Consensus        49 ~~~s-wtEQe~~v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLM---------------------wKQSvw  106 (236)
T KOG4022|consen   49 GNKS-WTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLM---------------------WKQSVW  106 (236)
T ss_pred             CCcc-hhHHHHHHHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhH---------------------HHHHHH
Confidence            3433 34555566666655443  799999999977554432111 1111111                     333444


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCCCCCCCc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v~T~~~~  332 (475)
                      ....-.+.+..+++.  .|-+-..+.-++.-+.|++..|++.|+|+++|+++|+.+-.  +.|--+..|.|-..+|||.+
T Consensus       107 tSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNR  184 (236)
T KOG4022|consen  107 TSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNR  184 (236)
T ss_pred             HHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccc
Confidence            444445555555553  35666777778888999999999999999999999998753  45778889999999999877


Q ss_pred             ccccC
Q psy3252         333 NEEKS  337 (475)
Q Consensus       333 ~~~~~  337 (475)
                      +..+.
T Consensus       185 KwMP~  189 (236)
T KOG4022|consen  185 KWMPN  189 (236)
T ss_pred             ccCCC
Confidence            65443

>PLN02778 3,5-epimerase/4-reductase

Probab=98.96  E-value=1.7e-08  Score=101.30  Aligned_cols=129  Identities=12%  Similarity=0.132  Sum_probs=84.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +++|||||+|.||.+++++|+++|++|++..+                                                
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~------------------------------------------------   41 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG------------------------------------------------   41 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEecC------------------------------------------------
Confidence            57999999999999999999999999874321                                                


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |+. +.+.+...++..     ++|++||+||....... +...++-...                     +++|+.|+.+
T Consensus        42 ~~~-~~~~v~~~l~~~-----~~D~ViH~Aa~~~~~~~-~~~~~~p~~~---------------------~~~Nv~gt~~   93 (298)
T PLN02778         42 RLE-NRASLEADIDAV-----KPTHVFNAAGVTGRPNV-DWCESHKVET---------------------IRANVVGTLT   93 (298)
T ss_pred             ccC-CHHHHHHHHHhc-----CCCEEEECCcccCCCCc-hhhhhCHHHH---------------------HHHHHHHHHH
Confidence            233 444444444432     68999999997643211 1111111222                     8999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEecccc--ccc----------------cCCCChhhHHHHHHHHHHHHHHH
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQA--ANL----------------GIYGLAAYTSSKFALKGFAEALY  308 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a--~~~----------------~~~~~~~Y~aSKaAl~~l~~sLa  308 (475)
                      +++++...    +. +.|++||..  +..                +.+....|+.||.+.+.+++.++
T Consensus        94 ll~aa~~~----gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778         94 LADVCRER----GL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             HHHHHHHh----CC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            99988543    22 244454422  110                01123579999999999988764

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.96  E-value=5.1e-08  Score=116.90  Aligned_cols=179  Identities=17%  Similarity=0.112  Sum_probs=115.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC----CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRG----AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~G----a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++|+||||+|.||.++++.|+++|    .+|++..|+...... .+.+.......             .........++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~-------------~~~~~~~~~~i 1036 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTY-------------GIWDEEWASRI 1036 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHh-------------CCCchhhhcce
Confidence            5789999999999999999999987    689999997543322 22222110000             00001111468


Q ss_pred             EEEEeecCCCHHH--HHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         174 EYVSLDISKDYEN--IRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       174 ~~~~~Dvt~d~~~--v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .++.+|++ +..-  -...++++.   ..+|++||||+....    ..+.+.   .                     ..+
T Consensus      1037 ~~~~gDl~-~~~lgl~~~~~~~l~---~~~d~iiH~Aa~~~~----~~~~~~---~---------------------~~~ 1084 (1389)
T TIGR03443      1037 EVVLGDLS-KEKFGLSDEKWSDLT---NEVDVIIHNGALVHW----VYPYSK---L---------------------RDA 1084 (1389)
T ss_pred             EEEeccCC-CccCCcCHHHHHHHH---hcCCEEEECCcEecC----ccCHHH---H---------------------HHh
Confidence            89999997 4310  011222222   369999999996531    112222   2                     467


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc-----------------CC-----------CChhhHHHHHHHHHH
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG-----------------IY-----------GLAAYTSSKFALKGF  303 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------------~~-----------~~~~Y~aSKaAl~~l  303 (475)
                      |+.|+.++++.+..    .+..+++++||.+.+..                 .+           ....|+.||.+.+.+
T Consensus      1085 nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l 1160 (1389)
T TIGR03443      1085 NVIGTINVLNLCAE----GKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYI 1160 (1389)
T ss_pred             HHHHHHHHHHHHHh----CCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHH
Confidence            99999999887743    33457999999754311                 00           123599999999988


Q ss_pred             HHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         304 AEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       304 ~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++..+    ..|++++++.||.|.++.
T Consensus      1161 ~~~~~----~~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1161 IREAG----KRGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             HHHHH----hCCCCEEEECCCccccCC
Confidence            87643    348999999999998873

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1429|consensus

Probab=98.95  E-value=2.4e-08  Score=96.53  Aligned_cols=170  Identities=16%  Similarity=0.136  Sum_probs=119.0

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.....+++++||||+|.||.+||.+|..+|+.|+++|.-....+.....+-..                         .
T Consensus        21 ~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~-------------------------~   75 (350)
T KOG1429|consen   21 QVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGH-------------------------P   75 (350)
T ss_pred             cccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccC-------------------------c
Confidence            345566789999999999999999999999999999987544333322221111                         3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .++.+.-|+. ..     ++.       .+|.++|-|....+......+.                         +++.+
T Consensus        76 ~fel~~hdv~-~p-----l~~-------evD~IyhLAapasp~~y~~npv-------------------------ktIkt  117 (350)
T KOG1429|consen   76 NFELIRHDVV-EP-----LLK-------EVDQIYHLAAPASPPHYKYNPV-------------------------KTIKT  117 (350)
T ss_pred             ceeEEEeech-hH-----HHH-------HhhhhhhhccCCCCcccccCcc-------------------------ceeee
Confidence            4666777776 32     333       4788889888765543332222                         23889


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc----------------cCCCChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANL----------------GIYGLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~----------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                      |+.++++++..+...     ..+++..|+..-+-                +.-..++|...|.+.+.|+....++   .|
T Consensus       118 N~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~g  189 (350)
T KOG1429|consen  118 NVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EG  189 (350)
T ss_pred             cchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cC
Confidence            999999998877443     25677777644321                1123578999999988888776555   89


Q ss_pred             cEEEEEeCCCCCCCCCc
Q psy3252         316 LTITLCLPPDTDTPGFE  332 (475)
Q Consensus       316 IrVn~V~PG~v~T~~~~  332 (475)
                      |.|....+-++.+|.+.
T Consensus       190 iE~rIaRifNtyGPrm~  206 (350)
T KOG1429|consen  190 IEVRIARIFNTYGPRMH  206 (350)
T ss_pred             cEEEEEeeecccCCccc
Confidence            99999999999999544

>PLN00016 RNA-binding protein; Provisional

Probab=98.95  E-value=2.4e-08  Score=103.45  Aligned_cols=147  Identities=17%  Similarity=0.219  Sum_probs=95.4

Q ss_pred             CCCCEEEEe----cCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH-------HHHHHhCCCCcchhhhhHHHhhhcC
Q psy3252          96 PTNGTLSVT----GGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ-------EEIKKACPNPKFIRFIEYEEIKKAC  164 (475)
Q Consensus        96 l~gk~vLIT----Gas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~  164 (475)
                      ...++||||    ||+|.||.+++++|+++|++|++++|+........       .++..                    
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--------------------  109 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--------------------  109 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--------------------
Confidence            345789999    99999999999999999999999999865432211       01110                    


Q ss_pred             CCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccc
Q psy3252         165 PNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWR  244 (475)
Q Consensus       165 ~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (475)
                            ..++++.+|+. |   +.+++.     ...+|++||++|..         .+                      
T Consensus       110 ------~~v~~v~~D~~-d---~~~~~~-----~~~~d~Vi~~~~~~---------~~----------------------  143 (378)
T PLN00016        110 ------AGVKTVWGDPA-D---VKSKVA-----GAGFDVVYDNNGKD---------LD----------------------  143 (378)
T ss_pred             ------cCceEEEecHH-H---HHhhhc-----cCCccEEEeCCCCC---------HH----------------------
Confidence                  23677888987 5   333321     13699999987621         11                      


Q ss_pred             cchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCC--------ChhhHHHHHHHHHHHHHHHHHHccCCc
Q psy3252         245 SWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYG--------LAAYTSSKFALKGFAEALYMEVKQSGL  316 (475)
Q Consensus       245 ~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~--------~~~Y~aSKaAl~~l~~sLa~El~~~gI  316 (475)
                                ++    +.++..+.+.+-.++|++||...+.....        ...+. +|...+.+.+       ..|+
T Consensus       144 ----------~~----~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l  201 (378)
T PLN00016        144 ----------EV----EPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGV  201 (378)
T ss_pred             ----------HH----HHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCC
Confidence                      11    12233344455568999999765422111        01122 7887776542       3589


Q ss_pred             EEEEEeCCCCCCCC
Q psy3252         317 TITLCLPPDTDTPG  330 (475)
Q Consensus       317 rVn~V~PG~v~T~~  330 (475)
                      +++.+.|+++.++.
T Consensus       202 ~~~ilRp~~vyG~~  215 (378)
T PLN00016        202 NWTSFRPQYIYGPG  215 (378)
T ss_pred             CeEEEeceeEECCC
Confidence            99999999999885

>KOG0747|consensus

Probab=98.79  E-value=7.9e-08  Score=93.01  Aligned_cols=168  Identities=14%  Similarity=0.100  Sum_probs=118.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCEEEEEecC---hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARD---EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |.++||||.|.||...+..++..  .++.+.++.-   .. ++. .+++.                         +..+.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~-l~~~~-------------------------n~p~y   59 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKN-LEPVR-------------------------NSPNY   59 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cch-hhhhc-------------------------cCCCc
Confidence            78999999999999999999876  3455544321   11 111 11111                         12678


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++..|+. +...+..++..     ..||.|+|-|..........-+.+.                         ...|+
T Consensus        60 kfv~~di~-~~~~~~~~~~~-----~~id~vihfaa~t~vd~s~~~~~~~-------------------------~~nni  108 (331)
T KOG0747|consen   60 KFVEGDIA-DADLVLYLFET-----EEIDTVIHFAAQTHVDRSFGDSFEF-------------------------TKNNI  108 (331)
T ss_pred             eEeecccc-chHHHHhhhcc-----CchhhhhhhHhhhhhhhhcCchHHH-------------------------hcCCc
Confidence            89999999 76666655542     4899999999876432222112222                         77899


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccccc------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLG------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      +++..+++.+....   +--++|++|+...+-.            ..+...|++||+|.+++.+++...   +|+.|..+
T Consensus       109 l~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~  182 (331)
T KOG0747|consen  109 LSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRS---YGLPVVTT  182 (331)
T ss_pred             hhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhc---cCCcEEEE
Confidence            99999998876543   2346999998543311            112458999999999999999776   79999999


Q ss_pred             eCCCCCCCC
Q psy3252         322 LPPDTDTPG  330 (475)
Q Consensus       322 ~PG~v~T~~  330 (475)
                      .-+.|++|.
T Consensus       183 R~nnVYGP~  191 (331)
T KOG0747|consen  183 RMNNVYGPN  191 (331)
T ss_pred             eccCccCCC
Confidence            999999994

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.77  E-value=3.8e-08  Score=95.26  Aligned_cols=174  Identities=14%  Similarity=0.063  Sum_probs=120.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++||||-+|-=|.-+|+.|++.|+.|.-+.|..+......-.|.+...                   . ...+++.+.
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~-------------------~-~~~~l~l~~   61 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPH-------------------L-NDPRLHLHY   61 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccc-------------------c-CCceeEEEe
Confidence            68999999999999999999999999999988864322211101111110                   0 114588999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |..++.++++++     .+|-+.|-|+.+..+-..+.+..                         +.+++..|++
T Consensus        62 gDLt-D~~~l~r~l~~v-----~PdEIYNLaAQS~V~vSFe~P~~-------------------------T~~~~~iGtl  110 (345)
T COG1089          62 GDLT-DSSNLLRILEEV-----QPDEIYNLAAQSHVGVSFEQPEY-------------------------TADVDAIGTL  110 (345)
T ss_pred             cccc-chHHHHHHHHhc-----CchhheeccccccccccccCcce-------------------------eeeechhHHH
Confidence            9999 999999999887     78999999987754332222222                         2889999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEecccc--cc---------ccCCCChhhHHHHHHHHHHHHHHHHHHc---cCCcEEEEEeC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQA--AN---------LGIYGLAAYTSSKFALKGFAEALYMEVK---QSGLTITLCLP  323 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a--~~---------~~~~~~~~Y~aSKaAl~~l~~sLa~El~---~~gIrVn~V~P  323 (475)
                      +++.++.-.-  .+.-++..-||..  |.         .|+.+.++|+++|....-++...+..+.   -.||-+|.=+|
T Consensus       111 rlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP  188 (345)
T COG1089         111 RLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESP  188 (345)
T ss_pred             HHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCC
Confidence            9988764332  2234555555521  21         2345678999999999888888877653   45677776555


Q ss_pred             C
Q psy3252         324 P  324 (475)
Q Consensus       324 G  324 (475)
                      .
T Consensus       189 ~  189 (345)
T COG1089         189 L  189 (345)
T ss_pred             C
Confidence            4

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.76  E-value=1.5e-07  Score=104.63  Aligned_cols=142  Identities=14%  Similarity=0.140  Sum_probs=95.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +++|||||+|.||.++++.|.++|++|.+.                                                ..
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------------------------------------~~  412 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------------------------------------KG  412 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEee------------------------------------------------cc
Confidence            479999999999999999999999887311                                                13


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+.+...++..     ++|+|||+|+....... +...++-...                     +++|+.|+.+
T Consensus       413 ~l~-d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~~-~~~~~~~~~~---------------------~~~N~~gt~~  464 (668)
T PLN02260        413 RLE-DRSSLLADIRNV-----KPTHVFNAAGVTGRPNV-DWCESHKVET---------------------IRANVVGTLT  464 (668)
T ss_pred             ccc-cHHHHHHHHHhh-----CCCEEEECCcccCCCCC-ChHHhCHHHH---------------------HHHHhHHHHH
Confidence            566 777777666543     68999999997642111 1111122222                     8999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccc-----------c-------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANL-----------G-------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------~-------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                      +++++...    + .+.|++||...+.           +       .+....|+.||.+.+.+++.+.   ...++|+..
T Consensus       465 l~~a~~~~----g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~---~~~~~r~~~  536 (668)
T PLN02260        465 LADVCREN----G-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD---NVCTLRVRM  536 (668)
T ss_pred             HHHHHHHc----C-CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh---hheEEEEEE
Confidence            99998542    2 2456665532210           1       1123689999999999987763   234567776


Q ss_pred             EeCC
Q psy3252         321 CLPP  324 (475)
Q Consensus       321 V~PG  324 (475)
                      +..+
T Consensus       537 ~~~~  540 (668)
T PLN02260        537 PISS  540 (668)
T ss_pred             eccc
Confidence            6643

>PRK12320 hypothetical protein; Provisional

Probab=98.74  E-value=1.7e-07  Score=103.33  Aligned_cols=135  Identities=13%  Similarity=0.156  Sum_probs=94.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|.||.+++++|+++|++|++++|+....         ..                        ..+.++.+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~------------------------~~ve~v~~D   48 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LD------------------------PRVDYVCAS   48 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------cc------------------------CCceEEEcc
Confidence            589999999999999999999999999999864321         00                        346789999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ +.. +.+++       ..+|++||+|+....        .    .                     ..+|+.|+.++
T Consensus        49 l~-d~~-l~~al-------~~~D~VIHLAa~~~~--------~----~---------------------~~vNv~Gt~nL   86 (699)
T PRK12320         49 LR-NPV-LQELA-------GEADAVIHLAPVDTS--------A----P---------------------GGVGITGLAHV   86 (699)
T ss_pred             CC-CHH-HHHHh-------cCCCEEEEcCccCcc--------c----h---------------------hhHHHHHHHHH
Confidence            99 753 33332       268999999985310        0    1                     45799999998


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++++.    +.+ .+||++||..+   .+  ..|..    .+.    +..   ..++.+..+.|+++.++.
T Consensus        87 leAA~----~~G-vRiV~~SS~~G---~~--~~~~~----aE~----ll~---~~~~p~~ILR~~nVYGp~  136 (699)
T PRK12320         87 ANAAA----RAG-ARLLFVSQAAG---RP--ELYRQ----AET----LVS---TGWAPSLVIRIAPPVGRQ  136 (699)
T ss_pred             HHHHH----HcC-CeEEEEECCCC---CC--ccccH----HHH----HHH---hcCCCEEEEeCceecCCC
Confidence            88763    333 37999998643   22  12321    222    211   245889999999999983

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.72  E-value=1.2e-07  Score=91.88  Aligned_cols=158  Identities=23%  Similarity=0.266  Sum_probs=97.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      ++||||+|-||.+++.+|.+.|++|+++.|+..+.+...                                  ...   +
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~----------------------------------~~~---v   43 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL----------------------------------HPN---V   43 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc----------------------------------Ccc---c
Confidence            589999999999999999999999999999976543211                                  000   0


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHH
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT  260 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~  260 (475)
                      . ..+.+....+      .++|++||-||......  ..+.+.-+.+                     ++    +-+..+
T Consensus        44 ~-~~~~~~~~~~------~~~DavINLAG~~I~~r--rWt~~~K~~i---------------------~~----SRi~~T   89 (297)
T COG1090          44 T-LWEGLADALT------LGIDAVINLAGEPIAER--RWTEKQKEEI---------------------RQ----SRINTT   89 (297)
T ss_pred             c-ccchhhhccc------CCCCEEEECCCCccccc--cCCHHHHHHH---------------------HH----HHhHHH
Confidence            0 1111111111      17999999999754321  1344433333                     33    344455


Q ss_pred             HHHHHHHHhC-CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHH-------ccCCcEEEEEeCCCCCCC
Q psy3252         261 KALVEGMKQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEV-------KQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       261 ~~~lp~m~~~-~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El-------~~~gIrVn~V~PG~v~T~  329 (475)
                      +.+.....+. .+.++.+-+|..|+++......|.-....-+.|...++.+|       ...|+||..+.-|.|-++
T Consensus        90 ~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~  166 (297)
T COG1090          90 EKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSP  166 (297)
T ss_pred             HHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecC
Confidence            5555555533 34667667788888886655555433333334444444433       345899999999999875

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.64  E-value=9.2e-08  Score=99.44  Aligned_cols=83  Identities=23%  Similarity=0.261  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhH
Q psy3252          94 LAPTNGTLSVTGG----------------SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY  157 (475)
Q Consensus        94 ~~l~gk~vLITGa----------------s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~  157 (475)
                      .+++||++|||||                ||++|+++|++|+++|++|++++++.+ ++         .+          
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~----------  243 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TP----------  243 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CC----------
Confidence            3578999999999                455999999999999999999998752 11         00          


Q ss_pred             HHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC
Q psy3252         158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT  215 (475)
Q Consensus       158 ~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~  215 (475)
                                   ..  ...+|++ +.+++.+.+.   +.++.+|+||||||+....+
T Consensus       244 -------------~~--~~~~dv~-~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        244 -------------AG--VKRIDVE-SAQEMLDAVL---AALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             -------------CC--cEEEccC-CHHHHHHHHH---HhcCCCCEEEEccccccccc
Confidence                         11  2467999 8777766655   56789999999999875544

>KOG2865|consensus

Probab=98.54  E-value=1.1e-06  Score=85.30  Aligned_cols=225  Identities=17%  Similarity=0.146  Sum_probs=142.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      -+++|-++-|.||+|.+|+-++.+|++.|..|++-.|-.+.--   .+++-.+                      ..+++
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmG----------------------dLGQv  111 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMG----------------------DLGQV  111 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecc----------------------cccce
Confidence            4677889999999999999999999999999999888543211   1111111                      11678


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .+...|+. |+++|+++++       +-+++||--|.-....  +.+                           .-+||+
T Consensus       112 l~~~fd~~-DedSIr~vvk-------~sNVVINLIGrd~eTk--nf~---------------------------f~Dvn~  154 (391)
T KOG2865|consen  112 LFMKFDLR-DEDSIRAVVK-------HSNVVINLIGRDYETK--NFS---------------------------FEDVNV  154 (391)
T ss_pred             eeeccCCC-CHHHHHHHHH-------hCcEEEEeeccccccC--Ccc---------------------------cccccc
Confidence            99999999 9999999987       5689999998643211  111                           156888


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .++-.+++.+-..    +--++|.+|+..+.+  ...+-|--||++-+--++.   ++    -..+.|.|..|.+.--.-
T Consensus       155 ~~aerlAricke~----GVerfIhvS~Lganv--~s~Sr~LrsK~~gE~aVrd---af----PeAtIirPa~iyG~eDrf  221 (391)
T KOG2865|consen  155 HIAERLARICKEA----GVERFIHVSCLGANV--KSPSRMLRSKAAGEEAVRD---AF----PEATIIRPADIYGTEDRF  221 (391)
T ss_pred             hHHHHHHHHHHhh----Chhheeehhhccccc--cChHHHHHhhhhhHHHHHh---hC----CcceeechhhhcccchhH
Confidence            8888887776443    334599999988653  3445677888776544332   22    235677888877651110


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh-
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL-  412 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~-  412 (475)
                      .........    ..                       ..+|-+...+++          ...++-+-|||.+|+.|+. 
T Consensus       222 ln~ya~~~r----k~-----------------------~~~pL~~~GekT----------~K~PVyV~DVaa~IvnAvkD  264 (391)
T KOG2865|consen  222 LNYYASFWR----KF-----------------------GFLPLIGKGEKT----------VKQPVYVVDVAAAIVNAVKD  264 (391)
T ss_pred             HHHHHHHHH----hc-----------------------CceeeecCCcce----------eeccEEEehHHHHHHHhccC
Confidence            000000000    00                       001111111111          0124667899999999998 


Q ss_pred             ---cCCeeEEeCchhHHHHHH
Q psy3252         413 ---KGNYFSTVGLESYLITTL  430 (475)
Q Consensus       413 ---~g~~~~~~~~~~~~~~~~  430 (475)
                         .|+.+-.+|+.-+.+..|
T Consensus       265 p~s~Gktye~vGP~~yql~eL  285 (391)
T KOG2865|consen  265 PDSMGKTYEFVGPDRYQLSEL  285 (391)
T ss_pred             ccccCceeeecCCchhhHHHH
Confidence               477888888877765554

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.54  E-value=3.5e-06  Score=89.00  Aligned_cols=195  Identities=18%  Similarity=0.182  Sum_probs=130.5

Q ss_pred             cCCCCCCCEEEEecCC-ChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          92 RYLAPTNGTLSVTGGS-SGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        92 ~~~~l~gk~vLITGas-~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      ......++++|||||+ +.||-+++.+|+..|++||++..+. ++..+....|-..+...                    
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~--------------------  449 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARY--------------------  449 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCC--------------------
Confidence            3455678999999999 7899999999999999999976543 33344444554444332                    


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcC--------------CccEEEEccccccCCCcccCCHH-HHHHhhhhhhhc
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCG--------------PVYMLVNCAGMALCGTLEEMTMQ-DIKVMEQPLWLR  234 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g--------------~IDvLVnnAG~~~~~~~~~~~~~-~~~~~~~~~~~~  234 (475)
                      +..+.++..+.. +..+|+++++.|-++..              .+|.+|--|.....+.+.+.... +++         
T Consensus       450 ga~LwvVpaN~~-SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~---------  519 (866)
T COG4982         450 GAALWVVPANMG-SYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFA---------  519 (866)
T ss_pred             CceEEEEecccc-chhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHH---------
Confidence            267888999999 99999999999865321              36788888887766666665443 222         


Q ss_pred             cccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCC---CCeEEEecccc-ccccCCCChhhHHHHHHHHHHHHHHHHH
Q psy3252         235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG---RGCIVITASQA-ANLGIYGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       235 ~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~---~g~IV~iSS~a-~~~~~~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                                    +++-+.....++-.+.++-..++   +-++|.=.|.. |.++  +-.+|+-||++++.+..-+..|
T Consensus       520 --------------~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPNrG~FG--gDGaYgEsK~aldav~~RW~sE  583 (866)
T COG4982         520 --------------MRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPNRGMFG--GDGAYGESKLALDAVVNRWHSE  583 (866)
T ss_pred             --------------HHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCCCCccC--CCcchhhHHHHHHHHHHHhhcc
Confidence                          55556555565555444332221   23566655532 2222  4568999999999988777666


Q ss_pred             H-ccCCcEEEEEeCCCCCCCCCc
Q psy3252         311 V-KQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       311 l-~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      - -..-+.+....-|++++-++.
T Consensus       584 s~Wa~~vsl~~A~IGWtrGTGLM  606 (866)
T COG4982         584 SSWAARVSLAHALIGWTRGTGLM  606 (866)
T ss_pred             chhhHHHHHhhhheeeecccccc
Confidence            3 122256666678999865443

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.53  E-value=4.1e-07  Score=90.95  Aligned_cols=85  Identities=22%  Similarity=0.339  Sum_probs=65.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCh---hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDE---KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .++++|+++|||| ||+|++++..|++.|++ |++++|+.   ++++++.+++.+.+                       
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~-----------------------  177 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV-----------------------  177 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC-----------------------
Confidence            4578999999999 69999999999999995 99999996   67777777665432                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                       ..+....+|++ +.+++...++       ..|+||||-.+.
T Consensus       178 -~~~~~~~~d~~-~~~~~~~~~~-------~~DilINaTp~G  210 (289)
T PRK12548        178 -PECIVNVYDLN-DTEKLKAEIA-------SSDILVNATLVG  210 (289)
T ss_pred             -CCceeEEechh-hhhHHHhhhc-------cCCEEEEeCCCC
Confidence             22345578888 7666655443       469999998654

>KOG1202|consensus

Probab=98.52  E-value=5e-07  Score=100.33  Aligned_cols=169  Identities=20%  Similarity=0.252  Sum_probs=128.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHH--H-HHHHHHHHhCCCCcchhhhhHHHhhhcCCCCC
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKL--L-QAQEEIKKACPNPKFIRFIEYEEIKKACPNPK  168 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l--~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
                      .+--..|.++|+||-||.|+++|..|..+|+ ++++++|+--+.  + ......+..+                      
T Consensus      1763 t~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~G---------------------- 1820 (2376)
T KOG1202|consen 1763 TYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRG---------------------- 1820 (2376)
T ss_pred             hhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcC----------------------
Confidence            3444578999999999999999999999999 688999974332  1 1233333333                      


Q ss_pred             ccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         169 FIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       169 ~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                        .++.+-..|++ ..+..+.++++. .+.+.+-.++|-|.+...+.+++.++++|+.+                     
T Consensus      1821 --VqV~vsT~nit-t~~ga~~Li~~s-~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~v--------------------- 1875 (2376)
T KOG1202|consen 1821 --VQVQVSTSNIT-TAEGARGLIEES-NKLGPVGGIFNLAAVLRDGLIENQTPKNFKDV--------------------- 1875 (2376)
T ss_pred             --eEEEEecccch-hhhhHHHHHHHh-hhcccccchhhHHHHHHhhhhcccChhHHHhh---------------------
Confidence              56777778888 778888888765 45689999999999999999999999999987                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHH
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                      -+-.+.|+.++-+.-...--+-  --+|.+||+..-.++.|+..|+-+..+++.+++.=+.+
T Consensus      1876 a~pK~~~Ti~LD~~sRe~C~~L--dyFv~FSSvscGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1876 AKPKYSGTINLDRVSREICPEL--DYFVVFSSVSCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             hccceeeeeehhhhhhhhCccc--ceEEEEEeecccCCCCcccccchhhHHHHHHHHHhhhc
Confidence            5566666666655433222111  35888999998899999999999999999998764443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.43  E-value=1.1e-06  Score=93.10  Aligned_cols=64  Identities=19%  Similarity=0.264  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      .+.+++.+++.|..  .|+||+++|..+..   +...|+++|+++.+|+++++.|+ ++||++|+|.|+.
T Consensus       102 ~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~  165 (450)
T PRK08261        102 LYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP  165 (450)
T ss_pred             HHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC
Confidence            34566777777754  48999999987653   34579999999999999999999 7899999999986

>KOG1221|consensus

Probab=98.43  E-value=4.9e-06  Score=87.13  Aligned_cols=192  Identities=19%  Similarity=0.197  Sum_probs=111.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC---EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA---HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga---~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ++||+++||||+|++|+.+..+|+..--   ++++.-|.. +.+++.+++.....++.|      ...+...++  ...+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k-~g~~~~~Rl~~~~~~~lF------~~l~~~~p~--~l~K   80 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAK-KGKAAQERLRTELKDPLF------EVLKEKKPE--ALEK   80 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecC-CCCCHHHHHHHHHhhhHH------HHHHhhCcc--ceec
Confidence            5799999999999999999999987642   677766642 112222222221111111      111111111  2267


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +..+.+|++.+.-.+..--.+  .....+|++||+|+.....       |.++..                     +.+|
T Consensus        81 v~pi~GDi~~~~LGis~~D~~--~l~~eV~ivih~AAtvrFd-------e~l~~a---------------------l~iN  130 (467)
T KOG1221|consen   81 VVPIAGDISEPDLGISESDLR--TLADEVNIVIHSAATVRFD-------EPLDVA---------------------LGIN  130 (467)
T ss_pred             ceeccccccCcccCCChHHHH--HHHhcCCEEEEeeeeeccc-------hhhhhh---------------------hhhh
Confidence            888999998432222211111  1123799999999965321       222222                     8999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEecccccccc----------CC------------------------------CChh
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLG----------IY------------------------------GLAA  292 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~----------~~------------------------------~~~~  292 (475)
                      ..|+.++++.+.....-   -..|.+|..-....          .+                              ....
T Consensus       131 t~Gt~~~l~lak~~~~l---~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNT  207 (467)
T KOG1221|consen  131 TRGTRNVLQLAKEMVKL---KALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNT  207 (467)
T ss_pred             hHhHHHHHHHHHHhhhh---heEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCc
Confidence            99999999987665433   34777877554411          00                              0123


Q ss_pred             hHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         293 YTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       293 Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |.-+|+-.+.+...     ...++.+..+.|+.|.+...+..
T Consensus       208 YtfTKal~E~~i~~-----~~~~lPivIiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  208 YTFTKALAEMVIQK-----EAENLPLVIIRPSIITSTYKEPF  244 (467)
T ss_pred             eeehHhhHHHHHHh-----hccCCCeEEEcCCceeccccCCC
Confidence            55555544444322     23568999999999988754433

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.42  E-value=2.4e-06  Score=80.18  Aligned_cols=85  Identities=20%  Similarity=0.268  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++++++++|+||+|++|+++++.|++.|++|++++|+.++++++.+++.+..                         ..
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-------------------------~~   78 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-------------------------GE   78 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-------------------------CC
Confidence            36789999999999999999999999999999999999998888877765332                         12


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      ....+|.. +.+++.+.++       ..|++|++....
T Consensus        79 ~~~~~~~~-~~~~~~~~~~-------~~diVi~at~~g  108 (194)
T cd01078          79 GVGAVETS-DDAARAAAIK-------GADVVFAAGAAG  108 (194)
T ss_pred             cEEEeeCC-CHHHHHHHHh-------cCCEEEECCCCC
Confidence            34567888 7777766553       579888866543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.38  E-value=9.4e-07  Score=91.63  Aligned_cols=83  Identities=28%  Similarity=0.342  Sum_probs=63.0

Q ss_pred             CCCCCEEEEecC---------------CCh-HHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHH
Q psy3252          95 APTNGTLSVTGG---------------SSG-IGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYE  158 (475)
Q Consensus        95 ~l~gk~vLITGa---------------s~G-IG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~  158 (475)
                      +++||++|||||               |+| +|.++|++|..+|++|++++++....          .+           
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~-----------  240 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TP-----------  240 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CC-----------
Confidence            478999999999               667 99999999999999999988764310          00           


Q ss_pred             HhhhcCCCCCccceEEEEEeecCCCHHHH-HHHHHHHHHhcCCccEEEEccccccCCCc
Q psy3252         159 EIKKACPNPKFIRFIEYVSLDISKDYENI-RSALQPAMDRCGPVYMLVNCAGMALCGTL  216 (475)
Q Consensus       159 ~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v-~~~~~~i~~~~g~IDvLVnnAG~~~~~~~  216 (475)
                                  .  ....+|++ +.+++ ++++++.   ++.+|++|+|||+....+.
T Consensus       241 ------------~--~~~~~~v~-~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       241 ------------P--GVKSIKVS-TAEEMLEAALNEL---AKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             ------------C--CcEEEEec-cHHHHHHHHHHhh---cccCCEEEEcccccccccc
Confidence                        1  12468998 88877 5555443   5689999999999866544

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.31  E-value=1.8e-06  Score=83.46  Aligned_cols=91  Identities=13%  Similarity=0.165  Sum_probs=59.7

Q ss_pred             EEEEecCCCh-HHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSG-IGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~G-IG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +-.||+.|+| ||.++|++|+++|++|++++|+....        ....                       ..+.++.+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~~~-----------------------~~v~~i~v   65 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PEPH-----------------------PNLSIIEI   65 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CCCC-----------------------CCeEEEEE
Confidence            5678988766 99999999999999999998764210        0000                       23445554


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHh
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVM  227 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~  227 (475)
                      +..   ++   +.+.+.+.++.+|+||||||+....+....+.+++..+
T Consensus        66 ~s~---~~---m~~~l~~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~  108 (229)
T PRK06732         66 ENV---DD---LLETLEPLVKDHDVLIHSMAVSDYTPVYMTDLEEVSAS  108 (229)
T ss_pred             ecH---HH---HHHHHHHHhcCCCEEEeCCccCCceehhhhhhhhhhhh
Confidence            322   22   23333344567999999999976555555666666655

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.28  E-value=6.6e-05  Score=68.79  Aligned_cols=149  Identities=21%  Similarity=0.304  Sum_probs=101.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .+.|.||||-.|..|+++..++|+.|+.+.||.+++...                                ..+..++.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------------------------------~~~~i~q~D   49 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------------------------------QGVTILQKD   49 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------------------------------ccceeeccc
Confidence            467899999999999999999999999999998876432                                235578899


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      +. |.+++.+.+.       +.|++|..-|...+..      +.                         +.      ...
T Consensus        50 if-d~~~~a~~l~-------g~DaVIsA~~~~~~~~------~~-------------------------~~------~k~   84 (211)
T COG2910          50 IF-DLTSLASDLA-------GHDAVISAFGAGASDN------DE-------------------------LH------SKS   84 (211)
T ss_pred             cc-ChhhhHhhhc-------CCceEEEeccCCCCCh------hH-------------------------HH------HHH
Confidence            99 8887755543       7899999888653211      11                         00      111


Q ss_pred             HHHHHHHHHhCCCCeEEEecccccccc--------CCCCh-hh-HHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLG--------IYGLA-AY-TSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~--------~~~~~-~Y-~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      .++++..++..+..+++.++...+..-        .|.++ .| ..+++. .-+.+.|+.|   .++..+-|+|...--|
T Consensus        85 ~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~-ae~L~~Lr~~---~~l~WTfvSPaa~f~P  160 (211)
T COG2910          85 IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQ-AEFLDSLRAE---KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHH-HHHHHHHhhc---cCcceEEeCcHHhcCC
Confidence            455555666667788999987666532        23222 34 444433 3344566555   4588999999876666

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.28  E-value=1.3e-05  Score=77.18  Aligned_cols=75  Identities=23%  Similarity=0.297  Sum_probs=58.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      |+||||+|.+|+.+++.|++.|++|.++.|+..+  +...+++..+                          ++++.+|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g--------------------------~~vv~~d~   52 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG--------------------------AEVVEADY   52 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT--------------------------TEEEES-T
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc--------------------------ceEeeccc
Confidence            6899999999999999999999999999999732  2233444432                          35679999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      . |.+++.++++       ++|.+|++-+..
T Consensus        53 ~-~~~~l~~al~-------g~d~v~~~~~~~   75 (233)
T PF05368_consen   53 D-DPESLVAALK-------GVDAVFSVTPPS   75 (233)
T ss_dssp             T--HHHHHHHHT-------TCSEEEEESSCS
T ss_pred             C-CHHHHHHHHc-------CCceEEeecCcc
Confidence            9 8888887765       899999888754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.17  E-value=4.9e-05  Score=74.23  Aligned_cols=140  Identities=19%  Similarity=0.166  Sum_probs=97.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .+|||||||.+|.+++++|.++|++|.+..|+.+++....                               ..+.+...|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------------------------------~~v~~~~~d   50 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------------------------------GGVEVVLGD   50 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------------------------------CCcEEEEec
Confidence            5899999999999999999999999999999988766543                               236788999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      +. +..++...++       ++|.+++..+... ... .  .                           ......+....
T Consensus        51 ~~-~~~~l~~a~~-------G~~~~~~i~~~~~-~~~-~--~---------------------------~~~~~~~~~~~   91 (275)
T COG0702          51 LR-DPKSLVAGAK-------GVDGVLLISGLLD-GSD-A--F---------------------------RAVQVTAVVRA   91 (275)
T ss_pred             cC-CHhHHHHHhc-------cccEEEEEecccc-ccc-c--h---------------------------hHHHHHHHHHH
Confidence            99 9888777765       7888888887653 211 0  0                           23334444444


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                      .+...     .+..+++.+|+..+..  .....|..+|...+...++       .|+.-..+.|
T Consensus        92 a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~~-------sg~~~t~lr~  141 (275)
T COG0702          92 AEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAALRS-------SGIPYTTLRR  141 (275)
T ss_pred             HHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHHh-------cCCCeEEEec
Confidence            44432     1234577777766543  3456899999988776444       5666555553

>KOG1203|consensus

Probab=98.07  E-value=6.2e-05  Score=77.75  Aligned_cols=172  Identities=17%  Similarity=0.131  Sum_probs=106.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .+-.+|+|+||+|++|+-+++.|.++|+.|.++.|+.++.+.... +....                        .....
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d------------------------~~~~~  131 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVD------------------------LGLQN  131 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccc------------------------cccce
Confidence            345689999999999999999999999999999999887766543 11000                        12233


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +..|.....+....+++.+.   -...+++-++|.-.... +..++                           ..|.+.|
T Consensus       132 v~~~~~~~~d~~~~~~~~~~---~~~~~v~~~~ggrp~~e-d~~~p---------------------------~~VD~~g  180 (411)
T KOG1203|consen  132 VEADVVTAIDILKKLVEAVP---KGVVIVIKGAGGRPEEE-DIVTP---------------------------EKVDYEG  180 (411)
T ss_pred             eeeccccccchhhhhhhhcc---ccceeEEecccCCCCcc-cCCCc---------------------------ceecHHH
Confidence            44555412222333332221   13557777776543211 01111                           5577888


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHH-HHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKG-FAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~-l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +.+++.++...    +-.++|++||+.+.........+..  .+... .=+....++...|+.-..|.||....+
T Consensus       181 ~knlvdA~~~a----Gvk~~vlv~si~~~~~~~~~~~~~~--~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  181 TKNLVDACKKA----GVKRVVLVGSIGGTKFNQPPNILLL--NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             HHHHHHHHHHh----CCceEEEEEeecCcccCCCchhhhh--hhhhhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            89999888433    3456999999888765554444432  11111 112344556678999999999988765

>KOG1431|consensus

Probab=97.98  E-value=0.00016  Score=68.26  Aligned_cols=218  Identities=14%  Similarity=0.096  Sum_probs=129.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC---EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA---HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga---~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++++|||++|=.|.+|.+.+.++|.   +.++.+.                                             
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------------------------------   36 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------------------------------   36 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------------------------------
Confidence            5899999999999999999999886   3443332                                             


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCccc--CCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE--MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      -.+|++ +.++++++++..     +...+|+.|+.... .+.+  .+.+-                         +.+|+
T Consensus        37 kd~DLt-~~a~t~~lF~~e-----kPthVIhlAAmVGG-lf~N~~ynldF-------------------------~r~Nl   84 (315)
T KOG1431|consen   37 KDADLT-NLADTRALFESE-----KPTHVIHLAAMVGG-LFHNNTYNLDF-------------------------IRKNL   84 (315)
T ss_pred             cccccc-chHHHHHHHhcc-----CCceeeehHhhhcc-hhhcCCCchHH-------------------------Hhhcc
Confidence            247999 999999999875     67788888875432 2222  22332                         22333


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccc-----c-----------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcE
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAAN-----L-----------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLT  317 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-----~-----------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIr  317 (475)
                      .-.-++++.+-.+    +.-++|+..|..-+     .           +-|..-.|+-+|..+.-..+..+.+   +|-.
T Consensus        85 ~indNVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~q---hg~~  157 (315)
T KOG1431|consen   85 QINDNVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQ---HGRD  157 (315)
T ss_pred             eechhHHHHHHHh----chhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHH---hCCc
Confidence            3223333333322    22224444332211     1           1223456999998887777888777   5667


Q ss_pred             EEEEeCCCCCCCCCcccccCCc------------------cccc---cccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         318 ITLCLPPDTDTPGFENEEKSKP------------------RETS---LISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       318 Vn~V~PG~v~T~~~~~~~~~~~------------------~~~~---~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..++.|-++.+|- ++..+...                  ....   ...|++.+.-.+|.|++-++++-.-..-..+. 
T Consensus       158 ~tsviPtNvfGph-DNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEpii-  235 (315)
T KOG1431|consen  158 YTSVIPTNVFGPH-DNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGVEPII-  235 (315)
T ss_pred             eeeeccccccCCC-CCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCccceE-
Confidence            7888898888873 32222110                  0000   11355566677888888777664433211111 


Q ss_pred             ccccccCCCcccccccCCCCCCChHHHHHHHHHHHh-cCC
Q psy3252         377 FENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL-KGN  415 (475)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~-~g~  415 (475)
                                   +-.+...-++..++|+++.+++. .|+
T Consensus       236 -------------ls~ge~~EVtI~e~aeaV~ea~~F~G~  262 (315)
T KOG1431|consen  236 -------------LSVGESDEVTIREAAEAVVEAVDFTGK  262 (315)
T ss_pred             -------------eccCccceeEHHHHHHHHHHHhCCCce
Confidence                         00111235788999999999998 344

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.89  E-value=4.5e-05  Score=80.85  Aligned_cols=78  Identities=26%  Similarity=0.259  Sum_probs=59.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|+++|+|+++ +|.++|+.|++.|++|++++++. +.+++..+++.+.                          .+
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~--------------------------~~   54 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL--------------------------GI   54 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--------------------------CC
Confidence            57899999999887 99999999999999999999975 4444444555432                          24


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL  212 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~  212 (475)
                      .++..|.. +            +..+.+|+||+++|+..
T Consensus        55 ~~~~~~~~-~------------~~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         55 ELVLGEYP-E------------EFLEGVDLVVVSPGVPL   80 (450)
T ss_pred             EEEeCCcc-h------------hHhhcCCEEEECCCCCC
Confidence            46677777 4            11347899999999753

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.87  E-value=6.2e-05  Score=77.54  Aligned_cols=77  Identities=26%  Similarity=0.365  Sum_probs=63.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +.+||.|+ |+||+.+|..|+++| .+|++++|+.+++.++.+...                           .++...+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---------------------------~~v~~~~   53 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---------------------------GKVEALQ   53 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---------------------------ccceeEE
Confidence            47889998 999999999999999 799999999988877655321                           3678899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      +|+. |.+.+.++++       ..|++||++...
T Consensus        54 vD~~-d~~al~~li~-------~~d~VIn~~p~~   79 (389)
T COG1748          54 VDAA-DVDALVALIK-------DFDLVINAAPPF   79 (389)
T ss_pred             eccc-ChHHHHHHHh-------cCCEEEEeCCch
Confidence            9999 8887777766       239999999754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.86  E-value=6.7e-05  Score=66.37  Aligned_cols=47  Identities=30%  Similarity=0.366  Sum_probs=43.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++++++++|.|+ ||.|++++..|++.|++ |+++.|+.++++++.+++
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~   56 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF   56 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence            678999999997 89999999999999995 999999999999988877

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.78  E-value=7e-05  Score=77.86  Aligned_cols=76  Identities=29%  Similarity=0.458  Sum_probs=58.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+|.|| |.+|..+++.|++.+-  +|++.+|+.++++++.+++..                          .++.++.+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~--------------------------~~~~~~~~   53 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLG--------------------------DRVEAVQV   53 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TT--------------------------TTEEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccc--------------------------cceeEEEE
Confidence            689999 9999999999999985  799999999998888765511                          57889999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      |+. |.+++.++++       ..|++||++|..
T Consensus        54 d~~-~~~~l~~~~~-------~~dvVin~~gp~   78 (386)
T PF03435_consen   54 DVN-DPESLAELLR-------GCDVVINCAGPF   78 (386)
T ss_dssp             -TT-THHHHHHHHT-------TSSEEEE-SSGG
T ss_pred             ecC-CHHHHHHHHh-------cCCEEEECCccc
Confidence            999 9888887765       569999999965

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=97.70  E-value=4.9e-05  Score=73.37  Aligned_cols=36  Identities=28%  Similarity=0.387  Sum_probs=32.6

Q ss_pred             CCCCEEEEecCC----------------ChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          96 PTNGTLSVTGGS----------------SGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        96 l~gk~vLITGas----------------~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      +.||+||||+|.                |.||.++|++|+++|++|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            468999999886                999999999999999999998764

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.66  E-value=0.0002  Score=72.93  Aligned_cols=48  Identities=27%  Similarity=0.455  Sum_probs=41.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CC-EEEEEecChhHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKR-GA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~-Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++++|+|+||||+|.||..+|+.|+++ |. +|++++|+.+++.++..++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            689999999999999999999999865 64 8999999988877765543

>KOG2774|consensus

Probab=97.62  E-value=0.00019  Score=68.11  Aligned_cols=159  Identities=17%  Similarity=0.179  Sum_probs=101.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKR-GA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~-Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +-..+||||+-|-+|..+|..|-.+ |. .|++.+......     .....+                           -
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-----~V~~~G---------------------------P   90 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-----NVTDVG---------------------------P   90 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-----hhcccC---------------------------C
Confidence            3458999999999999999988655 65 677766433211     111111                           2


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++-.|+- |..++++++-     ..+||-|||-.+....  +.+.   ...              ++       .+||+.
T Consensus        91 yIy~DIL-D~K~L~eIVV-----n~RIdWL~HfSALLSA--vGE~---NVp--------------LA-------~~VNI~  138 (366)
T KOG2774|consen   91 YIYLDIL-DQKSLEEIVV-----NKRIDWLVHFSALLSA--VGET---NVP--------------LA-------LQVNIR  138 (366)
T ss_pred             chhhhhh-ccccHHHhhc-----ccccceeeeHHHHHHH--hccc---CCc--------------ee-------eeecch
Confidence            5667888 8777776653     2489999997764321  1111   111              11       889999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccc-ccccc------CC------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQ-AANLG------IY------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~-a~~~~------~~------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      |..++++.+..+-.      -||+-|. .++-|      .|      ....|+.||.-.+.+-+.+...   +|+.+-+.
T Consensus       139 GvHNil~vAa~~kL------~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~  209 (366)
T KOG2774|consen  139 GVHNILQVAAKHKL------KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSM  209 (366)
T ss_pred             hhhHHHHHHHHcCe------eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhh---cCccceec
Confidence            99999988755422      3555554 44332      12      2457999999888777776554   67777766


Q ss_pred             e-CCCCCC
Q psy3252         322 L-PPDTDT  328 (475)
Q Consensus       322 ~-PG~v~T  328 (475)
                      . ||.+..
T Consensus       210 rfPg~is~  217 (366)
T KOG2774|consen  210 RFPGIISA  217 (366)
T ss_pred             ccCccccc
Confidence            4 776654

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.58  E-value=0.00082  Score=66.62  Aligned_cols=42  Identities=26%  Similarity=0.267  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +|++++|+|+++++|.++++.+...|++|++++++.++.+.+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  185 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV  185 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999988766554

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG2733|consensus

Probab=97.55  E-value=0.00028  Score=70.71  Aligned_cols=85  Identities=21%  Similarity=0.311  Sum_probs=71.3

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAK----RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~----~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      -++|-||||.-|.-++.+++.    .|..+.+.+||+++++++.+.+.+..+.+.                   ...+ .
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~l-------------------s~~~-i   66 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDL-------------------SSSV-I   66 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCc-------------------ccce-E
Confidence            478999999999999999999    788999999999999999988877654321                   1344 8


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL  212 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~  212 (475)
                      +.||.+ |++++.+++.+       ..++|||+|...
T Consensus        67 ~i~D~~-n~~Sl~emak~-------~~vivN~vGPyR   95 (423)
T KOG2733|consen   67 LIADSA-NEASLDEMAKQ-------ARVIVNCVGPYR   95 (423)
T ss_pred             EEecCC-CHHHHHHHHhh-------hEEEEeccccce
Confidence            899999 99999998874       569999999653

>PLN00106 malate dehydrogenase

Probab=97.55  E-value=0.0004  Score=70.40  Aligned_cols=147  Identities=10%  Similarity=0.022  Sum_probs=89.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++|+|||++|.+|..+|..|+..|.  .++++|.++  .+..+-+|....                        ...  .
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~------------------------~~~--~   70 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN------------------------TPA--Q   70 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC------------------------cCc--e
Confidence            4899999999999999999997775  799999987  222122333221                        111  2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      ..|++ +.+++.+.       +...|++|+.||.....   ..+   ....                     +..|+...
T Consensus        71 i~~~~-~~~d~~~~-------l~~aDiVVitAG~~~~~---g~~---R~dl---------------------l~~N~~i~  115 (323)
T PLN00106         71 VRGFL-GDDQLGDA-------LKGADLVIIPAGVPRKP---GMT---RDDL---------------------FNINAGIV  115 (323)
T ss_pred             EEEEe-CCCCHHHH-------cCCCCEEEEeCCCCCCC---CCC---HHHH---------------------HHHHHHHH
Confidence            23433 22223332       24799999999985321   222   2223                     77787765


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEecc-ccc----c--------ccCCCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITAS-QAA----N--------LGIYGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS-~a~----~--------~~~~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                      ..+.+.    +.+.+...||+++| ..-    .        .+.|....|+.++.-...|...++.++.
T Consensus       116 ~~i~~~----i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        116 KTLCEA----VAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             HHHHHH----HHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence            555444    45555445665555 221    1        2345566788888666678888888865

>KOG1372|consensus

Probab=97.43  E-value=0.00029  Score=67.33  Aligned_cols=176  Identities=14%  Similarity=0.090  Sum_probs=110.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .|++||||-+|-=|.-+|.-|+..|+.|.-+-|..+.....  +|...+.+                |....+......-
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~--RIeHlY~n----------------P~~h~~~~mkLHY   89 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTA--RIEHLYSN----------------PHTHNGASMKLHY   89 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchh--hhhhhhcC----------------chhcccceeEEee
Confidence            36999999999999999999999999998777665544332  22222221                1112235677888


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      .|++ |...+.++++.+     .++-+.|-|+.....-..|++.-                         +-+|...|++
T Consensus        90 gDmT-Dss~L~k~I~~i-----kPtEiYnLaAQSHVkvSFdlpeY-------------------------TAeVdavGtL  138 (376)
T KOG1372|consen   90 GDMT-DSSCLIKLISTI-----KPTEVYNLAAQSHVKVSFDLPEY-------------------------TAEVDAVGTL  138 (376)
T ss_pred             cccc-chHHHHHHHhcc-----CchhhhhhhhhcceEEEeecccc-------------------------eeeccchhhh
Confidence            9999 999999999887     56777788877654332233221                         1567788999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccc------------cCCCChhhHHHHHHHHHHHHHHHHH---HccCCcEEEEEe
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANL------------GIYGLAAYTSSKFALKGFAEALYME---VKQSGLTITLCL  322 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~------------~~~~~~~Y~aSKaAl~~l~~sLa~E---l~~~gIrVn~V~  322 (475)
                      .++.++-..-...  +.-.+-.|.+-.+            |+...+.|+++|-+-.-++-..+..   ++-.||-+|.=+
T Consensus       139 RlLdAi~~c~l~~--~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHES  216 (376)
T KOG1372|consen  139 RLLDAIRACRLTE--KVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHES  216 (376)
T ss_pred             hHHHHHHhcCccc--ceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCC
Confidence            8888765443332  2222333332222            3445689999997644333333333   344567776655


Q ss_pred             CC
Q psy3252         323 PP  324 (475)
Q Consensus       323 PG  324 (475)
                      |-
T Consensus       217 PR  218 (376)
T KOG1372|consen  217 PR  218 (376)
T ss_pred             Cc
Confidence            53

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.34  E-value=0.0012  Score=65.38  Aligned_cols=48  Identities=23%  Similarity=0.335  Sum_probs=42.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      ..+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            46889999998 6999999999999999999999999888888776643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.30  E-value=0.0012  Score=67.04  Aligned_cols=161  Identities=13%  Similarity=0.051  Sum_probs=91.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++.+++.|||++|.||..+|..|+..|  ..++++|++.  ++..+-++....                        .  
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~------------------------~--   57 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHID------------------------T--   57 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcC------------------------c--
Confidence            345689999999999999999999666  4799999932  222222333221                        1  


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .....+.+ |..+..+.+       ...|++|++||.... +  ..+   ...+                     +..|+
T Consensus        58 ~~~v~~~t-d~~~~~~~l-------~gaDvVVitaG~~~~-~--~~t---R~dl---------------------l~~N~  102 (321)
T PTZ00325         58 PAKVTGYA-DGELWEKAL-------RGADLVLICAGVPRK-P--GMT---RDDL---------------------FNTNA  102 (321)
T ss_pred             CceEEEec-CCCchHHHh-------CCCCEEEECCCCCCC-C--CCC---HHHH---------------------HHHHH
Confidence            12234555 433322222       379999999997532 1  122   2222                     77787


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccc-------------cccCCCChhhHHHHHHHHH--HHHHHHHHHccCCcEE
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAA-------------NLGIYGLAAYTSSKFALKG--FAEALYMEVKQSGLTI  318 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~-------------~~~~~~~~~Y~aSKaAl~~--l~~sLa~El~~~gIrV  318 (475)
                      ...-.+    .+.|.+.+.-+||+++|--.             ..+.|....|+.+  .|++  |-..++..+   ||..
T Consensus       103 ~i~~~i----~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g--~LDs~R~r~~la~~l---~v~~  173 (321)
T PTZ00325        103 PIVRDL----VAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVT--TLDVVRARKFVAEAL---GMNP  173 (321)
T ss_pred             HHHHHH----HHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeech--hHHHHHHHHHHHHHh---CcCh
Confidence            665555    44556656567888777311             1234555577776  2543  444555553   4544


Q ss_pred             EEEeCCCCCCC
Q psy3252         319 TLCLPPDTDTP  329 (475)
Q Consensus       319 n~V~PG~v~T~  329 (475)
                      ..|. ++|-++
T Consensus       174 ~~V~-~~VlGe  183 (321)
T PTZ00325        174 YDVN-VPVVGG  183 (321)
T ss_pred             hheE-EEEEee
Confidence            4444 444443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.29  E-value=0.0016  Score=58.30  Aligned_cols=48  Identities=25%  Similarity=0.313  Sum_probs=40.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      ++++++++|+|+ |++|.++++.|.+.| .+|++++|+.++.++..+++.
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~   64 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG   64 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            356789999998 899999999999996 689999999888877766554

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG4039|consensus

Probab=97.22  E-value=0.0041  Score=56.81  Aligned_cols=158  Identities=15%  Similarity=0.069  Sum_probs=100.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .+.++++.++|.||+|-.|..+.+++++.+-  +|+++.|.+..-.                               ...
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-------------------------------at~   61 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-------------------------------ATD   61 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-------------------------------ccc
Confidence            3677888999999999999999999999985  8999999742111                               111


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ..+.....|.+ .   +.+.+    ..+...|+++++-|......-    .+.+                        +.
T Consensus        62 k~v~q~~vDf~-K---l~~~a----~~~qg~dV~FcaLgTTRgkaG----adgf------------------------yk  105 (238)
T KOG4039|consen   62 KVVAQVEVDFS-K---LSQLA----TNEQGPDVLFCALGTTRGKAG----ADGF------------------------YK  105 (238)
T ss_pred             ceeeeEEechH-H---HHHHH----hhhcCCceEEEeecccccccc----cCce------------------------Ee
Confidence            34555566665 3   33332    334589999999987643211    1111                        22


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      |.-.-.+.+++++    ++.+..++|.+||..+.-..  ...|--.|.-++.=...|--+      ++....||.+..+
T Consensus       106 vDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~  172 (238)
T KOG4039|consen  106 VDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPSS--RFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGE  172 (238)
T ss_pred             echHHHHHHHHHH----HhCCCeEEEEEeccCCCccc--ceeeeeccchhhhhhhhcccc------EEEEecCcceecc
Confidence            2222223333332    45666789999998765332  346777787666554443322      6778899998776

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.21  E-value=0.00085  Score=71.06  Aligned_cols=49  Identities=22%  Similarity=0.117  Sum_probs=39.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      ++.||+++|||+++ +|.++|+.|++.|++|++.+++........+++.+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~   50 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE   50 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence            46789999999985 99999999999999999999876444444444543

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.19  E-value=0.0012  Score=61.65  Aligned_cols=81  Identities=22%  Similarity=0.324  Sum_probs=48.3

Q ss_pred             CCCCEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHH
Q psy3252          96 PTNGTLSVTGG----------------SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE  159 (475)
Q Consensus        96 l~gk~vLITGa----------------s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~  159 (475)
                      |+||+||||+|                ||-.|.++|+.+..+|++|+++..... +..         +            
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p------------   58 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------P------------   58 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------------
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------c------------
Confidence            46888888876                678999999999999999999887632 110         0            


Q ss_pred             hhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC
Q psy3252         160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT  215 (475)
Q Consensus       160 ~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~  215 (475)
                                 ..+..+  ++. +.+++.+.+.   +.+..-|++|++|+++...+
T Consensus        59 -----------~~~~~i--~v~-sa~em~~~~~---~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   59 -----------PGVKVI--RVE-SAEEMLEAVK---ELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             -----------TTEEEE--E-S-SHHHHHHHHH---HHGGGGSEEEE-SB--SEEE
T ss_pred             -----------ccceEE--Eec-chhhhhhhhc---cccCcceeEEEecchhheee
Confidence                       234333  444 5455444444   44455699999999985433

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.18  E-value=0.0015  Score=66.42  Aligned_cols=33  Identities=18%  Similarity=0.156  Sum_probs=29.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-------CEEEEEecCh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG-------AHVTIVARDE  132 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G-------a~Vvl~~R~~  132 (475)
                      +++||||+|.+|.+++..|+..|       ..|++++++.
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            58999999999999999999854       5899999965

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.02  E-value=0.013  Score=56.67  Aligned_cols=37  Identities=27%  Similarity=0.435  Sum_probs=31.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE  132 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~  132 (475)
                      .+++++|+|.| .||+|.++++.|++.|. +++++|.+.
T Consensus         8 ~L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755           8 KLRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            35677888887 56999999999999998 899998753

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.97  E-value=0.0081  Score=75.49  Aligned_cols=179  Identities=14%  Similarity=0.103  Sum_probs=114.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+.|+.++|++.+++++.+++.+|.++|+.|+++..... ..   .   ...+                     ....+.
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~---~---~~~~---------------------~~~~~~ 1803 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VS---H---SASP---------------------LASAIA 1803 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cc---c---cccc---------------------cccccc
Confidence            456888999988999999999999999999887742211 00   0   0000                     001122


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      .+.+.-. +.+++..+++.+....+.++.+||-.+..... ....+...+...                     -...+.
T Consensus      1804 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~-~~~~~~~~~~~~---------------------~~~~l~ 1860 (2582)
T TIGR02813      1804 SVTLGTI-DDTSIEAVIKDIEEKTAQIDGFIHLQPQHKSV-ADKVDAIELPEA---------------------AKQSLM 1860 (2582)
T ss_pred             ccccccc-chHHHHHHHHhhhccccccceEEEeccccccc-cccccccccchh---------------------hHHHHH
Confidence            2334444 56778888888888888999999977754210 000000000000                     123344


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhh--------HHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAY--------TSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y--------~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                      ..|.+.|.+.+.+...+++.++.++...|-++..+...-        ....+++.+|+|+++.|+....+|...+.|.
T Consensus      1861 ~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1861 LAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             HHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            567888887766665566789999988877665332221        2357899999999999998877777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.94  E-value=0.0062  Score=62.30  Aligned_cols=84  Identities=20%  Similarity=0.288  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh---------------------hHHHHHHHHHHHhCCCCcc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE---------------------KKLLQAQEEIKKACPNPKF  151 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~---------------------~~l~~~~~~l~~~~~~~~~  151 (475)
                      ..+++++|+|.|+ ||+|.++|+.|+..|. +++++|++.                     .+.+.+++.+.+..+.   
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~---   95 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSE---   95 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCC---
Confidence            4577889999996 7899999999999998 899999874                     3455666677666543   


Q ss_pred             hhhhhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         152 IRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                                         .+++.+..|++ . +.+.+++       ...|++|.+..
T Consensus        96 -------------------v~i~~~~~~~~-~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         96 -------------------VEIVPVVTDVT-V-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             -------------------cEEEEEeccCC-H-HHHHHHh-------cCCCEEEEcCC
Confidence                               55777777776 3 3344432       35788887753

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.93  E-value=0.017  Score=57.05  Aligned_cols=37  Identities=24%  Similarity=0.417  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      -.+.+.+|+|.| .||+|.++|+.|++.|. +++++|.+
T Consensus        26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            456778899987 46999999999999995 89999876

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.89  E-value=0.035  Score=57.54  Aligned_cols=44  Identities=30%  Similarity=0.401  Sum_probs=37.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      +.++.++|.|+ |.+|+..++.+...|++|++++|+.++++.+..
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~  208 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDA  208 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            45677899987 799999999999999999999999877665443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.85  E-value=0.0028  Score=62.97  Aligned_cols=49  Identities=18%  Similarity=0.279  Sum_probs=43.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .++.+|+++|+|+ ||+|++++..|++.| .+|++++|+.++++++.+++.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            3578999999997 899999999999999 699999999998888777664

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.79  E-value=0.011  Score=55.98  Aligned_cols=84  Identities=19%  Similarity=0.349  Sum_probs=59.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCCCcchh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPNPKFIR  153 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~  153 (475)
                      ..+.+++|+|.| .||+|.++|+.|+..|. +++++|.+                   ..+.+.+++.+.+..+.     
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-----   90 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSD-----   90 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCC-----
Confidence            457788999998 67999999999999998 89999987                   34555566666665542     


Q ss_pred             hhhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                                       .++..+..++. + +.+.+++       ...|++|.+..
T Consensus        91 -----------------v~i~~~~~~i~-~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        91 -----------------IQVTALKERVT-A-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             -----------------CEEEEehhcCC-H-HHHHHHH-------hCCCEEEECCC
Confidence                             45566665665 3 3333332       36899888753

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.73  E-value=0.0031  Score=68.37  Aligned_cols=47  Identities=26%  Similarity=0.404  Sum_probs=41.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            577899999999 69999999999999999999999988887776544

>PRK06849 hypothetical protein; Provisional

Probab=96.73  E-value=0.011  Score=61.49  Aligned_cols=38  Identities=18%  Similarity=0.153  Sum_probs=34.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL  135 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l  135 (475)
                      .++|||||++.++|+.+++.|.+.|++|++++.+....
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~   41 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL   41 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            57999999999999999999999999999999886543

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.72  E-value=0.006  Score=60.91  Aligned_cols=50  Identities=20%  Similarity=0.256  Sum_probs=44.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      ++.+|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++...
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            567889999996 7899999999999998 7999999999999988887654

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.71  E-value=0.03  Score=49.83  Aligned_cols=46  Identities=17%  Similarity=0.397  Sum_probs=40.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      .|.|+|++|.+|.++|..|+..|.  .++++|++++.++..+.++...
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~   49 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHA   49 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhh
Confidence            578999999999999999999986  7999999998888777777654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.67  E-value=0.0092  Score=59.49  Aligned_cols=48  Identities=19%  Similarity=0.192  Sum_probs=42.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++++++.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            467899999975 8999999999999998 79999999999888877664

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.66  E-value=0.0067  Score=61.53  Aligned_cols=44  Identities=23%  Similarity=0.233  Sum_probs=38.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      .|.+++|+||+|++|..+++.+...|++|+.+.++.++.+.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            57899999999999999999888899999999998877665543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.65  E-value=0.014  Score=59.73  Aligned_cols=38  Identities=26%  Similarity=0.330  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE  132 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~  132 (475)
                      ..+++++|+|.|+ ||||..+|+.|+..|. +|+++|.+.
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            4567889999997 7999999999999999 899999873

>cd00704 MDH Malate dehydrogenase

Probab=96.63  E-value=0.011  Score=60.19  Aligned_cols=33  Identities=15%  Similarity=0.202  Sum_probs=29.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDE  132 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~  132 (475)
                      +|.||||+|.+|..++..|+..|.       .++++|+++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            578999999999999999998764       499999986

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.63  E-value=0.014  Score=58.12  Aligned_cols=49  Identities=16%  Similarity=0.312  Sum_probs=43.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      ++++|+++|.|+ ||-|++++..|++.|+ +|++++|+.++.+++.+.+..
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            467899999997 8999999999999998 799999999999888877654

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.62  E-value=0.0093  Score=59.63  Aligned_cols=79  Identities=25%  Similarity=0.228  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+++++|+|++++||.++++.+...|++|++++++.++.+.+.    ..+                        ..   .
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~~------------------------~~---~  214 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK----ELG------------------------AD---Y  214 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcC------------------------CC---e
Confidence            5789999999999999999999999999999999887665432    111                        10   1


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      ..|.. +.+....+.+...  .+.+|++++|+|
T Consensus       215 ~~~~~-~~~~~~~~~~~~~--~~~~d~~i~~~g  244 (342)
T cd08266         215 VIDYR-KEDFVREVRELTG--KRGVDVVVEHVG  244 (342)
T ss_pred             EEecC-ChHHHHHHHHHhC--CCCCcEEEECCc
Confidence            24555 5454454443332  236999999998

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.57  E-value=0.032  Score=56.20  Aligned_cols=45  Identities=16%  Similarity=0.341  Sum_probs=39.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      .+.|.|+ |++|.++|..|+..|  .+|+++++++++++....++...
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~   48 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDA   48 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHH
Confidence            5788886 899999999999999  47999999999888888777654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.55  E-value=0.0089  Score=61.22  Aligned_cols=43  Identities=21%  Similarity=0.197  Sum_probs=37.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+++|+|++|++|..+++.+...|++|+.++++.++.+.+.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~  200 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK  200 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            5889999999999999999888889999999998887766544

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.55  E-value=0.012  Score=59.92  Aligned_cols=34  Identities=18%  Similarity=0.188  Sum_probs=28.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecChh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDEK  133 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~~  133 (475)
                      +|.|+|++|.+|..++..|+..|.       .++++|++++
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~   41 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA   41 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc
Confidence            378999999999999999998664       4999998654

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.53  E-value=0.012  Score=59.76  Aligned_cols=148  Identities=11%  Similarity=0.027  Sum_probs=92.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecChhH--HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDEKK--LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      +.|.|+|++|.+|..+|..|+..|.       .++|+|.+++.  ++..+-++......                   ..
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-------------------~~   63 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFP-------------------LL   63 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhcccc-------------------cc
Confidence            3789999999999999999998886       69999995433  55444444432100                   00


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       ..+..   .-. +.+           .+..-|++|.+||.... +  ..+-.+   +                     +
T Consensus        64 -~~~~i---~~~-~~~-----------~~~daDivvitaG~~~k-~--g~tR~d---l---------------------l  100 (322)
T cd01338          64 -AEIVI---TDD-PNV-----------AFKDADWALLVGAKPRG-P--GMERAD---L---------------------L  100 (322)
T ss_pred             -CceEE---ecC-cHH-----------HhCCCCEEEEeCCCCCC-C--CCcHHH---H---------------------H
Confidence             11111   111 222           22378999999997532 1  223222   1                     5


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCC--CCeEEEeccccc--------ccc-CCCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRG--RGCIVITASQAA--------NLG-IYGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~--------~~~-~~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                      ..|+    -+++.+.+.+.+..  .+.||++|-..-        ..+ .|....|+.++.--..|...++..+.
T Consensus       101 ~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         101 KANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence            5554    46677777776655  466666664221        122 56666899999999999999998864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=96.52  E-value=0.0067  Score=61.38  Aligned_cols=34  Identities=21%  Similarity=0.393  Sum_probs=27.6

Q ss_pred             EEEEecCCChHHHHHHHHHHH-c--CCEEEEEecChh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAK-R--GAHVTIVARDEK  133 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~-~--Ga~Vvl~~R~~~  133 (475)
                      .++|.||+|+||.+++..|.. .  +..++++++++.
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            688999999999999998855 2  346888898743

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.50  E-value=0.012  Score=58.90  Aligned_cols=43  Identities=23%  Similarity=0.239  Sum_probs=38.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      +++.|++++|.|. |++|+++|+.|...|++|++++|+.++++.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            5788999999998 679999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.45  E-value=0.012  Score=58.84  Aligned_cols=42  Identities=36%  Similarity=0.432  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .+.+++|+||++++|+++++.+...|++|+++.++.++.+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            477999999999999999999999999999999887665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.42  E-value=0.021  Score=59.25  Aligned_cols=84  Identities=24%  Similarity=0.348  Sum_probs=59.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCCCcchh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPNPKFIR  153 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~  153 (475)
                      ..+++++|+|.|+ ||+|.+++..|+..|. ++++++++                   ..+.+.+.+.+.+..+.     
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-----  204 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD-----  204 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC-----
Confidence            3567888998865 7999999999999998 89999987                   45566666677665542     


Q ss_pred             hhhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                                       .++..+...++ + +.+..+++       ..|++|++..
T Consensus       205 -----------------v~v~~~~~~~~-~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        205 -----------------VQVEAVQERVT-S-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             -----------------CEEEEEeccCC-h-HHHHHHHh-------CCCEEEECCC
Confidence                             34555555554 2 33333332       5798888764

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.42  E-value=0.016  Score=57.16  Aligned_cols=42  Identities=33%  Similarity=0.432  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      ++++++|+|++++||.++++.+...|++|++++++.+..+.+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC  180 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999999987766544

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.40  E-value=0.034  Score=54.27  Aligned_cols=37  Identities=24%  Similarity=0.250  Sum_probs=32.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      ..+++++|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4567889999988 8999999999999998 88888765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.38  E-value=0.014  Score=59.34  Aligned_cols=39  Identities=31%  Similarity=0.377  Sum_probs=33.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      |+++||+||+||+|...++.....|++++++..+.++.+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~  181 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE  181 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence            899999999999999999999999987777666665555

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.37  E-value=0.014  Score=59.25  Aligned_cols=44  Identities=20%  Similarity=0.249  Sum_probs=37.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEE  141 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~  141 (475)
                      |.++||+||+|++|.++++.+...|+ +|+.+++++++.+.+.++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~  199 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE  199 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh
Confidence            37999999999999999888888899 899999988776655543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.37  E-value=0.033  Score=53.18  Aligned_cols=83  Identities=20%  Similarity=0.332  Sum_probs=57.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh------------------hHHHHHHHHHHHhCCCCcchhh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE------------------KKLLQAQEEIKKACPNPKFIRF  154 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~------------------~~l~~~~~~l~~~~~~~~~~~~  154 (475)
                      ..+++++|+|.| .||+|..+++.|+..|. +++++|.+.                  .+.+.+.+.+.+..+.      
T Consensus        24 ~~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~------   96 (212)
T PRK08644         24 EKLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPF------   96 (212)
T ss_pred             HHHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCC------
Confidence            346678899998 48999999999999998 699999872                  3444455555554432      


Q ss_pred             hhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         155 IEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                                      .++..+...++ + +.+.+++       ...|++|.+.
T Consensus        97 ----------------v~v~~~~~~i~-~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644         97 ----------------VEIEAHNEKID-E-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             ----------------CEEEEEeeecC-H-HHHHHHH-------cCCCEEEECC
Confidence                            45666666776 3 3333333       3688888773

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.36  E-value=0.033  Score=57.36  Aligned_cols=54  Identities=26%  Similarity=0.415  Sum_probs=43.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh-------------------hHHHHHHHHHHHhCCC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE-------------------KKLLQAQEEIKKACPN  148 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~-------------------~~l~~~~~~l~~~~~~  148 (475)
                      ..+++++|+|.|+ ||+|..+++.|+..|. +++++|.+.                   .+.+.+++.|.+..+.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~   97 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPD   97 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCC
Confidence            4567889999987 7999999999999998 899998763                   4566677777776654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.36  E-value=0.009  Score=56.47  Aligned_cols=46  Identities=22%  Similarity=0.287  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      .+++||+++|+|.+ .+|..+|+.|.+.|++|++++++.++++++.+
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            56889999999985 89999999999999999999999877766654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.35  E-value=0.013  Score=58.96  Aligned_cols=42  Identities=21%  Similarity=0.251  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.++||+||+|++|..+++.+...|++|+.++++.++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999988888899999999988776554

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.31  E-value=0.024  Score=56.69  Aligned_cols=49  Identities=16%  Similarity=0.345  Sum_probs=40.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh---hHHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE---KKLLQAQEEIK  143 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~---~~l~~~~~~l~  143 (475)
                      .++++|+++|.|+ ||-+++++-.|+..|+ +|++++|+.   ++.+++++++.
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            4578999999996 6779999999999997 899999995   46666666554

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.29  E-value=0.086  Score=53.44  Aligned_cols=50  Identities=14%  Similarity=0.295  Sum_probs=43.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhC
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKAC  146 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~  146 (475)
                      -.++++.|+|+ |++|.++|..|+..|.  .++++|++++.++..+.++....
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~   55 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAV   55 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhc
Confidence            34678999998 9999999999999997  79999999998888888877643

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.28  E-value=0.017  Score=60.64  Aligned_cols=48  Identities=8%  Similarity=0.121  Sum_probs=42.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      .++.||+++|.|+ ||+|..+++.|++.|+ +|+++.|+.++.+.+.+++
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            3688999999998 9999999999999996 7999999988877776654

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.24  E-value=0.042  Score=52.93  Aligned_cols=84  Identities=23%  Similarity=0.330  Sum_probs=58.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCCCcchh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPNPKFIR  153 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~  153 (475)
                      -.+.+++|+|.| .||+|.++|+.|+..|. +++++|.+                   ..+.+.+++.+++..+.     
T Consensus        17 ~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-----   90 (228)
T cd00757          17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD-----   90 (228)
T ss_pred             HHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC-----
Confidence            356778999998 67999999999999998 78888653                   23455566666665543     


Q ss_pred             hhhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                                       .++..+..+++ . +.+.+++       ...|++|.+..
T Consensus        91 -----------------~~i~~~~~~i~-~-~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          91 -----------------VEIEAYNERLD-A-ENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             -----------------CEEEEecceeC-H-HHHHHHH-------hCCCEEEEcCC
Confidence                             45666666665 3 3343333       26899988764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.19  E-value=0.08  Score=56.97  Aligned_cols=43  Identities=19%  Similarity=0.089  Sum_probs=36.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      ..+.+|+|+|+ |.+|+..+..+...|++|++++++.++++.+.
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae  205 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE  205 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            45789999985 69999999999999999999999998877544

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.11  E-value=0.009  Score=63.47  Aligned_cols=37  Identities=30%  Similarity=0.374  Sum_probs=33.0

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          95 APTNGTLSVTGG----------------SSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        95 ~l~gk~vLITGa----------------s~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      +|+||+||||+|                ||-.|.+||+++..+|++|+++.-.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp  305 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGP  305 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCC
Confidence            489999999987                5779999999999999999998743

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.04  E-value=0.031  Score=55.63  Aligned_cols=52  Identities=21%  Similarity=0.336  Sum_probs=45.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKAC  146 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~  146 (475)
                      .+.+|+.++|.| +||-+++++..|++.|+ +|+++.|+.++++++++.+.+.+
T Consensus       122 ~~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~  174 (283)
T COG0169         122 VDVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG  174 (283)
T ss_pred             cccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence            455689999998 46999999999999996 89999999999999988887643

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.04  E-value=0.059  Score=49.76  Aligned_cols=31  Identities=26%  Similarity=0.604  Sum_probs=27.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecCh
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE  132 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~  132 (475)
                      |+|.| .||+|..+++.|++.|. +++++|.+.
T Consensus         2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            67777 58999999999999999 699999875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.01  E-value=0.065  Score=50.63  Aligned_cols=37  Identities=30%  Similarity=0.485  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      -.++.++|+|.|+ ||+|..+|..|++.|. +|+++|.+
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3466788999987 7999999999999999 79999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.00  E-value=0.015  Score=58.29  Aligned_cols=75  Identities=16%  Similarity=0.241  Sum_probs=59.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .++|-||+|.-|.-+|++|+.+|.+-++.+||..++..+...|....                             -..+
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~-----------------------------~~~p   58 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEA-----------------------------AVFP   58 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccc-----------------------------cccC
Confidence            57899999999999999999999999999999999999888775432                             1233


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      +- +++.+++.++       ..++|+||+|..
T Consensus        59 ~~-~p~~~~~~~~-------~~~VVlncvGPy   82 (382)
T COG3268          59 LG-VPAALEAMAS-------RTQVVLNCVGPY   82 (382)
T ss_pred             CC-CHHHHHHHHh-------cceEEEeccccc
Confidence            33 4455555544       689999999965

>KOG4288|consensus

Probab=95.88  E-value=0.052  Score=51.85  Aligned_cols=131  Identities=15%  Similarity=-0.028  Sum_probs=71.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      .+|=.......+++    .+.+..++|+||-.....+..-...|--+|.+.+.=      -+..++.|=..+.||++...
T Consensus       136 ~ing~ani~a~kaa----~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~E------ll~~~~~rgiilRPGFiyg~  205 (283)
T KOG4288|consen  136 RINGTANINAVKAA----AKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAE------LLKKFRFRGIILRPGFIYGT  205 (283)
T ss_pred             HhccHhhHHHHHHH----HHcCCceEEEEEhhhcCCCCccchhhhccchHHHHH------HHHhcCCCceeeccceeecc
Confidence            44555555555554    344567899999765533333334688888765531      13445667778899999876


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHH
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLE  409 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~  409 (475)
                        ++....       ..++.-.+.|-+.+--               +..+.....|....   ...++++.|+||..+++
T Consensus       206 --R~v~g~-------~~pL~~vg~pl~~~~~---------------~a~k~~~kLp~lg~---l~~ppvnve~VA~aal~  258 (283)
T KOG4288|consen  206 --RNVGGI-------KSPLHTVGEPLEMVLK---------------FALKPLNKLPLLGP---LLAPPVNVESVALAALK  258 (283)
T ss_pred             --cccCcc-------cccHHhhhhhHHHHHH---------------hhhchhhcCccccc---ccCCCcCHHHHHHHHHH
Confidence              222111       1223333444332211               00011111111111   11347899999999999


Q ss_pred             HHhcCCee
Q psy3252         410 DALKGNYF  417 (475)
Q Consensus       410 ai~~g~~~  417 (475)
                      +++.+.+.
T Consensus       259 ai~dp~f~  266 (283)
T KOG4288|consen  259 AIEDPDFK  266 (283)
T ss_pred             hccCCCcC
Confidence            99988764

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.86  E-value=0.18  Score=54.32  Aligned_cols=43  Identities=21%  Similarity=0.084  Sum_probs=36.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      ..+.+++|.|+ |.+|+..+..+...|++|++++++.++++.+.
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~  204 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ  204 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            34568999995 89999999999999999999999988765443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.84  E-value=0.1  Score=45.81  Aligned_cols=80  Identities=28%  Similarity=0.490  Sum_probs=57.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCCCcchhhhhH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPNPKFIRFIEY  157 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~~  157 (475)
                      +++|+|.| .||+|..+|+.|+..|. +++++|.+                   ..+.+.+.+.+.+..|.         
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~---------   71 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPD---------   71 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTT---------
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCc---------
Confidence            45788887 56999999999999999 79999864                   23566677777776653         


Q ss_pred             HHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       158 ~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                                   .++..+..+++  .+....+++       ..|++|.+..
T Consensus        72 -------------~~v~~~~~~~~--~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   72 -------------VEVEAIPEKID--EENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             -------------SEEEEEESHCS--HHHHHHHHH-------TSSEEEEESS
T ss_pred             -------------eeeeeeecccc--ccccccccc-------CCCEEEEecC
Confidence                         56777888875  344555542       6799988753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.81  E-value=0.02  Score=56.25  Aligned_cols=74  Identities=15%  Similarity=0.166  Sum_probs=53.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++||+|||+- |+.+++.|.++|++|++..++....+.+..                              .....+..|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~------------------------------~g~~~v~~g   50 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI------------------------------HQALTVHTG   50 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc------------------------------cCCceEEEC
Confidence            6899999998 999999999999999999888754332211                              111234566


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .. +.+++.+++.+     ..+|+||+.+..
T Consensus        51 ~l-~~~~l~~~l~~-----~~i~~VIDAtHP   75 (256)
T TIGR00715        51 AL-DPQELREFLKR-----HSIDILVDATHP   75 (256)
T ss_pred             CC-CHHHHHHHHHh-----cCCCEEEEcCCH
Confidence            66 66776666653     279999988864

This enzyme was found to be a monomer by gel filtration.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.80  E-value=0.1  Score=46.17  Aligned_cols=30  Identities=27%  Similarity=0.595  Sum_probs=26.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      ++|.|+ ||+|.++++.|+..|. +++++|.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            678886 8999999999999998 79998765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=95.77  E-value=0.011  Score=46.39  Aligned_cols=34  Identities=26%  Similarity=0.313  Sum_probs=23.3

Q ss_pred             CC-CEEEEecCCChHHHH--HHHHHHHcCCEEEEEecC
Q psy3252          97 TN-GTLSVTGGSSGIGKH--VAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        97 ~g-k~vLITGas~GIG~a--iA~~La~~Ga~Vvl~~R~  131 (475)
                      .| |+|||+|+|+|.|++  |+..| ..|++.+-+...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            45 899999999999999  55555 678887776654

>PRK14968 putative methyltransferase; Provisional

Probab=95.75  E-value=0.13  Score=47.16  Aligned_cols=81  Identities=21%  Similarity=0.111  Sum_probs=55.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .+++++|-.|++.|.   ++..+++.|.+|+.++++++.++.+.+.+...+...                     ..+.+
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~---------------------~~~~~   77 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRN---------------------NGVEV   77 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCC---------------------cceEE
Confidence            457789989888766   556666668999999999988887776665433110                     12677


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL  212 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~  212 (475)
                      +.+|+. +.     +    .+  ..+|+++.|.....
T Consensus        78 ~~~d~~-~~-----~----~~--~~~d~vi~n~p~~~  102 (188)
T PRK14968         78 IRSDLF-EP-----F----RG--DKFDVILFNPPYLP  102 (188)
T ss_pred             Eecccc-cc-----c----cc--cCceEEEECCCcCC
Confidence            788876 31     1    11  26899999987653

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.74  E-value=0.024  Score=60.81  Aligned_cols=47  Identities=21%  Similarity=0.348  Sum_probs=41.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEE  141 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~  141 (475)
                      .++.+++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            4678899999996 7999999999999999999999998877766543

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.71  E-value=0.1  Score=52.71  Aligned_cols=43  Identities=26%  Similarity=0.446  Sum_probs=34.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCh--hHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDE--KKLLQAQEEI  142 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~--~~l~~~~~~l  142 (475)
                      ++.|+|++|.+|..++..|+..|.  .|+++++++  ++++....++
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl   48 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDI   48 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchh
Confidence            688999999999999999999986  499999965  4454444333

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.71  E-value=0.049  Score=54.70  Aligned_cols=42  Identities=26%  Similarity=0.263  Sum_probs=36.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      ..+.+++++|.|. |++|+.++..|...|++|++++|+.++.+
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            4567999999997 68999999999999999999999976543

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.67  E-value=0.047  Score=52.52  Aligned_cols=42  Identities=31%  Similarity=0.368  Sum_probs=36.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      ..|++++|+|+++ +|.++++.+...|.+|+++++++++.+.+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~  174 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA  174 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4678999999998 99999999999999999999987665543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.66  E-value=0.048  Score=54.66  Aligned_cols=42  Identities=24%  Similarity=0.298  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.+++|+||+|++|..+++.+...|++|+.+.++.++.+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999988888999999999888766554

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.64  E-value=0.052  Score=53.69  Aligned_cols=41  Identities=32%  Similarity=0.391  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      +|++++|+|+++++|.+++..+...|++|+++.+++++.+.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAA  179 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999998776553

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.63  E-value=0.045  Score=57.70  Aligned_cols=46  Identities=17%  Similarity=0.276  Sum_probs=39.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEE  141 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~  141 (475)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++.+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            478999999997 999999999999999 5899999998877665543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.54  E-value=0.059  Score=56.88  Aligned_cols=46  Identities=24%  Similarity=0.365  Sum_probs=39.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEE  141 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~  141 (475)
                      ++.+++++|.|+ |++|..+++.|...|+ +|++++|+.+++++++.+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            478899999986 9999999999999998 899999998877666554

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.53  E-value=0.054  Score=55.16  Aligned_cols=42  Identities=19%  Similarity=0.188  Sum_probs=35.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      ..|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a  210 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA  210 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence            36889999986 8999999988888898 688899998877644

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.52  E-value=0.034  Score=51.06  Aligned_cols=44  Identities=27%  Similarity=0.324  Sum_probs=38.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|++.-+|..+|+.|.++|++|+++.|+.+.+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~   83 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE   83 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence            47899999999997667999999999999999999999765543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08223 hypothetical protein; Validated

Probab=95.51  E-value=0.091  Score=52.33  Aligned_cols=39  Identities=23%  Similarity=0.287  Sum_probs=32.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE  132 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~  132 (475)
                      +..+++.+|+|.|+ ||+|..++..|+..|. ++.++|.+.
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            34567888999975 5999999999999998 899998763

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.48  E-value=0.13  Score=48.46  Aligned_cols=36  Identities=19%  Similarity=0.347  Sum_probs=30.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      .+++.+|+|.|++ |+|.++++.|+..|. +++++|.+
T Consensus        16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            4567789998765 599999999999998 69898865

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.47  E-value=0.075  Score=53.21  Aligned_cols=43  Identities=23%  Similarity=0.213  Sum_probs=37.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+++|+|+++++|.++++.+...|++|+.++++.++.+.+.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~  187 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV  187 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5789999999999999999999999999999998887665443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.47  E-value=0.075  Score=54.04  Aligned_cols=42  Identities=31%  Similarity=0.416  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|+|+|.+ |+|...++.....|++|+.++|++++++.+.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~  207 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK  207 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH
Confidence            48999999999 9998887777779999999999999876554

>KOG1198|consensus

Probab=95.47  E-value=0.085  Score=54.17  Aligned_cols=81  Identities=21%  Similarity=0.294  Sum_probs=52.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      -+|+.+||.||+||+|.+.++-....|+.++++.++.+.++ +..++.+                              -
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lGA------------------------------d  204 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLGA------------------------------D  204 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcCC------------------------------c
Confidence            35789999999999999999988889954444445544443 2222221                              1


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      ...|.. +++ +.+.+....  .+++|+++-|.|..
T Consensus       205 ~vvdy~-~~~-~~e~~kk~~--~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  205 EVVDYK-DEN-VVELIKKYT--GKGVDVVLDCVGGS  236 (347)
T ss_pred             EeecCC-CHH-HHHHHHhhc--CCCccEEEECCCCC
Confidence            346776 633 332222221  56899999999863

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.46  E-value=0.14  Score=49.71  Aligned_cols=38  Identities=21%  Similarity=0.283  Sum_probs=31.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE  132 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~  132 (475)
                      ..+++++|+|.| .||+|..+++.|+..|. +++++|.+.
T Consensus        20 ~~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            356778899887 46999999999999998 899988753

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.41  E-value=0.075  Score=52.63  Aligned_cols=42  Identities=24%  Similarity=0.230  Sum_probs=37.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      ++++++|+|+++++|.+++..+...|++|++++++.++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999999987766544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN00203 glutamyl-tRNA reductase

Probab=95.40  E-value=0.064  Score=57.95  Aligned_cols=46  Identities=22%  Similarity=0.429  Sum_probs=41.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      +.+++++|.|+ |++|..+++.|...|+ +|++++|+.++.+.+.+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            78999999998 9999999999999997 7999999998887776554

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.39  E-value=0.15  Score=52.95  Aligned_cols=55  Identities=25%  Similarity=0.361  Sum_probs=42.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCC
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPN  148 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~  148 (475)
                      ...+++++|+|.|+ ||+|..+++.|+..|. +++++|.+                   ..+.+.+++.+.+..+.
T Consensus        36 q~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~  110 (370)
T PRK05600         36 QERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPD  110 (370)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCC
Confidence            35577889999975 6999999999999997 89999876                   24555666666666543

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.28  E-value=0.11  Score=52.54  Aligned_cols=30  Identities=27%  Similarity=0.426  Sum_probs=26.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      |+|.|+ ||||-++++.|+..|. ++.++|.+
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            678885 8999999999999998 79998865

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.24  E-value=0.088  Score=53.23  Aligned_cols=47  Identities=21%  Similarity=0.321  Sum_probs=39.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++.+++++|.|+ |.||..+++.|...|. +|++++|+.++.+++++++
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            367899999987 9999999999998775 7999999988877766543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.14  E-value=0.23  Score=52.59  Aligned_cols=46  Identities=17%  Similarity=0.260  Sum_probs=40.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-------CC--EEEEEecChhHHHHHHHHHHHh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR-------GA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~-------Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      +|.|+|++|.+|.++|..|+..       |.  +++++++++++++..+-+|...
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~da  156 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDS  156 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHh
Confidence            6899999999999999999988       65  7999999999998888877754

>PRK08328 hypothetical protein; Provisional

Probab=95.08  E-value=0.22  Score=48.14  Aligned_cols=40  Identities=20%  Similarity=0.336  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKK  134 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~  134 (475)
                      -.+++++|+|.|+ ||+|.++++.|+..|. +++++|.+.-+
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve   63 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPE   63 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccC
Confidence            3456778999875 5999999999999998 79999876433

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.04  E-value=0.09  Score=60.99  Aligned_cols=77  Identities=19%  Similarity=0.170  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CE-------------EEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRG-AH-------------VTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK  162 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~G-a~-------------Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (475)
                      +.|.|+|.|+ |.||...|+.|++.. +.             |++++++.+.++++.+.+                    
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~--------------------  626 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI--------------------  626 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc--------------------
Confidence            4678999996 899999999998763 23             888999988777665532                    


Q ss_pred             cCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       163 ~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                              ..+..+.+|++ |.+++.++++       .+|+||++...
T Consensus       627 --------~~~~~v~lDv~-D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        627 --------ENAEAVQLDVS-DSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             --------CCCceEEeecC-CHHHHHHhhc-------CCCEEEECCCc
Confidence                    13457899999 8877776654       59999999864

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.03  E-value=0.15  Score=47.99  Aligned_cols=36  Identities=19%  Similarity=0.338  Sum_probs=30.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      .+++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus        18 ~L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            45677899997 56699999999999998 78898764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.01  E-value=0.1  Score=55.27  Aligned_cols=40  Identities=23%  Similarity=0.429  Sum_probs=35.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      +++|.|+ |.+|.++++.|.+.|..|++++++.+..+++.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~   41 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD   41 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            5788887 999999999999999999999999887766543

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=94.91  E-value=0.2  Score=49.29  Aligned_cols=45  Identities=22%  Similarity=0.376  Sum_probs=38.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcC----CEEEEEecChhHHHHHHHHHHHh
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRG----AHVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~G----a~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      +.|.||+|.+|..++..|+..|    .+|+++|+++++++....++...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~   49 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDA   49 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHh
Confidence            4689998899999999999999    68999999998888877777654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.85  E-value=0.64  Score=47.07  Aligned_cols=46  Identities=22%  Similarity=0.340  Sum_probs=38.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhC
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKAC  146 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~  146 (475)
                      .|.|+|+ |.+|..+|..|+..|.  .++|+|.+++.++..+.++....
T Consensus         5 Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~   52 (312)
T cd05293           5 KVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGS   52 (312)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            6789996 9999999999999886  69999999888877777776543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14851 hypothetical protein; Provisional

Probab=94.79  E-value=0.19  Score=56.00  Aligned_cols=37  Identities=19%  Similarity=0.320  Sum_probs=31.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      -.+++++|+|.| .||+|..++..|+..|. +++++|.+
T Consensus        39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D   76 (679)
T PRK14851         39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFD   76 (679)
T ss_pred             HHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            356788999998 67999999999999998 78888764

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.79  E-value=0.12  Score=43.72  Aligned_cols=71  Identities=21%  Similarity=0.288  Sum_probs=50.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..+++.+                              ..+.++.+|.
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~------------------------------~~~~~i~gd~   49 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELRE------------------------------EGVEVIYGDA   49 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH------------------------------TTSEEEES-T
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh------------------------------cccccccccc
Confidence            4677774 79999999999977799999999887665543                              1255788999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      + +.+.++++      .....|.+|...+
T Consensus        50 ~-~~~~l~~a------~i~~a~~vv~~~~   71 (116)
T PF02254_consen   50 T-DPEVLERA------GIEKADAVVILTD   71 (116)
T ss_dssp             T-SHHHHHHT------TGGCESEEEEESS
T ss_pred             h-hhhHHhhc------CccccCEEEEccC
Confidence            9 87766554      1235677765554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PTZ00117 malate dehydrogenase; Provisional

Probab=94.77  E-value=0.19  Score=51.00  Aligned_cols=41  Identities=17%  Similarity=0.195  Sum_probs=34.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~  138 (475)
                      +.+.+.|+|| |.+|..++..++..| +.|+++|.+++.++..
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~   45 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGK   45 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhH
Confidence            4568899997 889999999999999 6899999998765533

>KOG0023|consensus

Probab=94.73  E-value=0.15  Score=51.16  Aligned_cols=47  Identities=19%  Similarity=0.250  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .|+++.|+|+.| ||.--++.--+.|.+|+++++...+-+++.+.|.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA  227 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA  227 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc
Confidence            799999999988 99655555555699999999998777777665543

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.72  E-value=0.16  Score=52.43  Aligned_cols=41  Identities=27%  Similarity=0.268  Sum_probs=35.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+++|+|+ |+||...+..+...|+ +|++++++.++++.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a  226 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA  226 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999985 8999999988888899 799999998876654

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.69  E-value=0.2  Score=53.61  Aligned_cols=49  Identities=18%  Similarity=0.092  Sum_probs=37.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-HHHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-KLLQAQEEIKK  144 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-~l~~~~~~l~~  144 (475)
                      .+++++|+|.|+ |++|.++|+.|.++|++|++++++.. ......+.+.+
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~   62 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA   62 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence            467889999996 78999999999999999999986543 33333444544

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.66  E-value=0.27  Score=47.60  Aligned_cols=30  Identities=23%  Similarity=0.428  Sum_probs=26.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      |+|.| .||||-++++.|+..|. ++.++|.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56676 77999999999999998 89998875

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.63  E-value=0.1  Score=48.41  Aligned_cols=44  Identities=27%  Similarity=0.459  Sum_probs=37.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      +|.|.|+ |-+|..+|..++..|++|++++++.+.+++..+.+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678887 8999999999999999999999999998888777665

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=94.58  E-value=0.14  Score=51.84  Aligned_cols=42  Identities=26%  Similarity=0.248  Sum_probs=35.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~  138 (475)
                      ..|.+++|+|+ |++|..+++.+...|++ |+++++++++.+.+
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~  204 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA  204 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            34889999986 89999999999899998 99999988776544

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.57  E-value=0.15  Score=50.81  Aligned_cols=42  Identities=24%  Similarity=0.229  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~  183 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV  183 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            477999999999999999999999999999999988766543

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=94.52  E-value=0.38  Score=48.96  Aligned_cols=45  Identities=20%  Similarity=0.257  Sum_probs=36.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCh--hHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDE--KKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~--~~l~~~~~~l~~  144 (475)
                      .|.|+|++|.+|.++|..|+..|.       .++++|.++  ++++..+.++..
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~   58 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELED   58 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhh
Confidence            688999999999999999998884       699999965  446655555554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK04148 hypothetical protein; Provisional

Probab=94.49  E-value=0.083  Score=46.55  Aligned_cols=41  Identities=22%  Similarity=0.218  Sum_probs=34.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +++.+++.|.+  -|.++|..|++.|++|+.+|.++...+.+.
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~   56 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAK   56 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            45689999987  777889999999999999999998665543

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.36  E-value=0.11  Score=46.32  Aligned_cols=44  Identities=18%  Similarity=0.160  Sum_probs=39.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .+++||.++|.|.|.-+|+.++..|.++|++|.+++++...+++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            57899999999999999999999999999999999876654544

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.32  E-value=0.27  Score=50.10  Aligned_cols=41  Identities=27%  Similarity=0.339  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++++|.|+ |+||..++..+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4889999999 9999999999989999999999998877654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.30  E-value=0.13  Score=49.17  Aligned_cols=43  Identities=33%  Similarity=0.478  Sum_probs=38.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++.|.||+|.+|.+++..|++.|++|++.+|++++.+.+.+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4789999999999999999999999999999998877766544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.28  E-value=0.24  Score=51.91  Aligned_cols=44  Identities=18%  Similarity=0.296  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC---EEEEEecChhHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA---HVTIVARDEKKLLQAQE  140 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga---~Vvl~~R~~~~l~~~~~  140 (475)
                      .|.+++|.||+|+||...++.+...|+   +|++++++.++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            467999999999999998876666553   79999999988776543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.26  E-value=0.2  Score=51.53  Aligned_cols=41  Identities=24%  Similarity=0.259  Sum_probs=35.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.++||.|+ ++||...++.+...|+ +|++++++.++++.+
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~  227 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA  227 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            4889999975 8999999999989999 799999998877644

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK07411 hypothetical protein; Validated

Probab=94.23  E-value=0.33  Score=50.66  Aligned_cols=37  Identities=22%  Similarity=0.314  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      ..+++.+|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        34 ~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         34 KRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3566788999975 5999999999999998 89998874

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=94.23  E-value=0.19  Score=48.33  Aligned_cols=74  Identities=22%  Similarity=0.304  Sum_probs=54.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .++|.| .|-+|..+|+.|.++|++|++++++++..++...+-                            ...+.+.+|
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----------------------------~~~~~v~gd   52 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----------------------------LDTHVVIGD   52 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----------------------------cceEEEEec
Confidence            456665 567999999999999999999999998877633210                            236778899


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      -+ +.+.++++-      ....|++|..-|
T Consensus        53 ~t-~~~~L~~ag------i~~aD~vva~t~   75 (225)
T COG0569          53 AT-DEDVLEEAG------IDDADAVVAATG   75 (225)
T ss_pred             CC-CHHHHHhcC------CCcCCEEEEeeC
Confidence            99 877665541      136788876665

>PRK07877 hypothetical protein; Provisional

Probab=94.21  E-value=0.25  Score=55.48  Aligned_cols=36  Identities=19%  Similarity=0.219  Sum_probs=31.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~  131 (475)
                      ..+++++|+|.|+  |+|..+|..|+..|.  +++++|.+
T Consensus       103 ~~L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D  140 (722)
T PRK07877        103 ERLGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFD  140 (722)
T ss_pred             HHHhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCC
Confidence            4577889999999  499999999999993  89998874

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.19  E-value=0.19  Score=52.98  Aligned_cols=42  Identities=24%  Similarity=0.230  Sum_probs=37.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      ..+.|++++|.|. |.||+.+|+.|...|++|+++++++.+..
T Consensus       208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            3478999999997 69999999999999999999999876643

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.15  E-value=1.1  Score=45.67  Aligned_cols=38  Identities=18%  Similarity=0.172  Sum_probs=32.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLL  136 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~  136 (475)
                      .+.+.|.| +|.+|..+|..++..|. +|+++|.+++.++
T Consensus         6 ~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~   44 (321)
T PTZ00082          6 RRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ   44 (321)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhh
Confidence            45788999 58899999999999995 9999999987654

>PLN02740 Alcohol dehydrogenase-like

Probab=94.12  E-value=0.25  Score=51.12  Aligned_cols=41  Identities=24%  Similarity=0.332  Sum_probs=35.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++|+|.|+ |+||...+..+...|+ +|++++++.++++.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a  239 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG  239 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence            5789999985 9999999998888999 699999988877655

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.11  E-value=0.38  Score=50.32  Aligned_cols=37  Identities=27%  Similarity=0.355  Sum_probs=31.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      ..+++.+|+|.|+ ||+|..+|+.|+..|. +++++|.+
T Consensus        38 ~~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         38 KRLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            3456788999975 6999999999999998 78898864

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.09  E-value=0.13  Score=51.21  Aligned_cols=44  Identities=23%  Similarity=0.235  Sum_probs=38.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      ..++.||+++|+|.|.-+|+.+|..|..+|++|+++.++...++
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~  196 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA  196 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            35799999999999999999999999999999999988765443

>PRK14852 hypothetical protein; Provisional

Probab=94.00  E-value=0.32  Score=55.87  Aligned_cols=37  Identities=16%  Similarity=0.301  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      -.+++.+|+|.| .||+|..+|+.|+..|. ++.++|.+
T Consensus       328 ~kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D  365 (989)
T PRK14852        328 RRLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFD  365 (989)
T ss_pred             HHHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            457788999998 67999999999999998 78888764

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=93.99  E-value=0.89  Score=45.70  Aligned_cols=44  Identities=20%  Similarity=0.400  Sum_probs=37.1

Q ss_pred             EEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhC
Q psy3252         102 SVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKAC  146 (475)
Q Consensus       102 LITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~  146 (475)
                      .|.|+ |++|..+|..|+..|  .+++++|++++.++....+|....
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~   47 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHAS   47 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhc
Confidence            57786 689999999999999  579999999998888887776543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=93.98  E-value=0.48  Score=47.87  Aligned_cols=42  Identities=12%  Similarity=0.229  Sum_probs=32.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      ++.|+|++|.+|.++|..|+..|.  .++++|.+  +++..+-+|.
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~   45 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLS   45 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhH
Confidence            578999999999999999999884  79999998  4333333343

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=93.94  E-value=0.3  Score=49.39  Aligned_cols=32  Identities=16%  Similarity=0.311  Sum_probs=29.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--EEEEEecCh
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDE  132 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~  132 (475)
                      |.|+|++|.+|.++|..|+..|.  .++++|+++
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~   35 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG   35 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence            67999999999999999999885  799999986

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=93.92  E-value=0.65  Score=42.10  Aligned_cols=91  Identities=19%  Similarity=0.215  Sum_probs=55.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++-+.|- |-+|..+|+.|+++|++|.+++|+.++.+++.++-.....+     ..+   ..         ....++-.=
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s-----~~e---~~---------~~~dvvi~~   64 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADS-----PAE---AA---------EQADVVILC   64 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESS-----HHH---HH---------HHBSEEEE-
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhh-----hhh---Hh---------hcccceEee
Confidence            5667775 79999999999999999999999998887765431100000     000   00         112344555


Q ss_pred             cCCCHHHHHHHHHH--HHHhcCCccEEEEccc
Q psy3252         180 ISKDYENIRSALQP--AMDRCGPVYMLVNCAG  209 (475)
Q Consensus       180 vt~d~~~v~~~~~~--i~~~~g~IDvLVnnAG  209 (475)
                      +. +.+++++++..  +.....+=+++|++.-
T Consensus        65 v~-~~~~v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   65 VP-DDDAVEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             SS-SHHHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             cc-cchhhhhhhhhhHHhhccccceEEEecCC
Confidence            66 77888888887  6655544456665543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=93.88  E-value=0.41  Score=47.74  Aligned_cols=42  Identities=29%  Similarity=0.377  Sum_probs=36.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.+++|+|+++++|.++++.+...|++|+++.++.++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999988888887766554

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=93.87  E-value=0.59  Score=47.14  Aligned_cols=45  Identities=18%  Similarity=0.330  Sum_probs=36.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      .|.|+|+ |+||.++|..|+.++.  .+++++.+++.++..+.+|...
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~   48 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHA   48 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhc
Confidence            5789999 9999999999988875  7999999977776666666543

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=93.87  E-value=0.29  Score=48.77  Aligned_cols=43  Identities=26%  Similarity=0.329  Sum_probs=37.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+++|.|+++++|.++++.....|++|+++.++.++.+.+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~  181 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR  181 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH
Confidence            5789999999999999999999999999999988877655443

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=93.85  E-value=0.28  Score=48.34  Aligned_cols=42  Identities=33%  Similarity=0.374  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +|++++|+|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999887665543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=93.85  E-value=0.049  Score=45.66  Aligned_cols=38  Identities=24%  Similarity=0.309  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      ++++||.+||.|| |.+|..-++.|++.|++|++++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5789999999998 8999999999999999999999886

>PRK05442 malate dehydrogenase; Provisional

Probab=93.76  E-value=0.41  Score=48.76  Aligned_cols=45  Identities=20%  Similarity=0.255  Sum_probs=34.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCh--hHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDE--KKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~--~~l~~~~~~l~~  144 (475)
                      .|.|+|++|.+|..+|..|+..|.       .++++|.++  ++++..+.++..
T Consensus         6 KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~   59 (326)
T PRK05442          6 RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDD   59 (326)
T ss_pred             EEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhh
Confidence            788999999999999999998774       699999854  335544444443

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=93.76  E-value=0.5  Score=40.92  Aligned_cols=76  Identities=21%  Similarity=0.371  Sum_probs=53.8

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCEEE-EEecCh----------------------hHHHHHHHHHHHhCCCCcchhhh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAK-RGAHVT-IVARDE----------------------KKLLQAQEEIKKACPNPKFIRFI  155 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~-~Ga~Vv-l~~R~~----------------------~~l~~~~~~l~~~~~~~~~~~~~  155 (475)
                      +|+|.|++|-+|+.+++.+.+ .|..++ .++|+.                      +.++++.++              
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--------------   67 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--------------   67 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--------------
Confidence            578999999999999999999 677755 467765                      112221111              


Q ss_pred             hHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         156 EYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       156 ~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                                        .=+..|.| .++.+...++.+.+.  ++.+++-..|.
T Consensus        68 ------------------~DVvIDfT-~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   68 ------------------ADVVIDFT-NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             -------------------SEEEEES--HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             ------------------CCEEEEcC-ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence                              11678999 999999999988876  78888888875

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=93.76  E-value=0.3  Score=49.91  Aligned_cols=39  Identities=26%  Similarity=0.240  Sum_probs=32.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec---ChhHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR---DEKKLL  136 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R---~~~~l~  136 (475)
                      .|++|+|+|+ |++|...+..+...|++|++++|   ++++++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~  213 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD  213 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH
Confidence            6889999985 99999999888889999999998   444444

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=93.74  E-value=0.48  Score=47.43  Aligned_cols=30  Identities=23%  Similarity=0.453  Sum_probs=25.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      |+|.| .||+|-++++.|+..|. ++.++|.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D   32 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMD   32 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            66776 67999999999999998 78888764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=93.73  E-value=0.12  Score=48.85  Aligned_cols=39  Identities=23%  Similarity=0.439  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      +++++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            46789999999998 7999999999999999999998764

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=93.72  E-value=0.26  Score=48.61  Aligned_cols=41  Identities=22%  Similarity=0.188  Sum_probs=34.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQ  137 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~  137 (475)
                      ..|++++|.|+ |+||+..++.+...|++ |++++++.++++.
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            36889999986 89999999988888996 8888888776643

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.69  E-value=0.14  Score=44.75  Aligned_cols=94  Identities=18%  Similarity=0.223  Sum_probs=55.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++-|.|+ |-+|.++++.|.+.|++|..+ +|+.+..+.+...+.......                ..........+-+
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~----------------~~~~~~~aDlv~i   74 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILD----------------LEEILRDADLVFI   74 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT---------------------TTGGGCC-SEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccc----------------cccccccCCEEEE
Confidence            6778887 789999999999999998765 577666666655443211000                0001123445566


Q ss_pred             ecCCCHHHHHHHHHHHHHh--cCCccEEEEcccccc
Q psy3252         179 DISKDYENIRSALQPAMDR--CGPVYMLVNCAGMAL  212 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~--~g~IDvLVnnAG~~~  212 (475)
                      -+. | +.+..+++++...  +.+=.++||+.|-..
T Consensus        75 avp-D-daI~~va~~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   75 AVP-D-DAIAEVAEQLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             -S--C-CHHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred             Eec-h-HHHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence            676 5 5788898888765  333469999999653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=93.68  E-value=0.17  Score=50.21  Aligned_cols=43  Identities=33%  Similarity=0.350  Sum_probs=37.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEE  141 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~  141 (475)
                      +++++|.|+ ||-+++++..|++.|+ +|.+++|+.++.+++++.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            568889885 8999999999999998 699999999888776654

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=93.67  E-value=0.27  Score=50.60  Aligned_cols=42  Identities=24%  Similarity=0.285  Sum_probs=33.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|+|.|+ |+||..++..+...|++|++++.+.++..++.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~  224 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAI  224 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHH
Confidence            5889999765 89999999988889999988887766544433

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=93.62  E-value=0.71  Score=48.09  Aligned_cols=46  Identities=17%  Similarity=0.309  Sum_probs=37.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-E----EEE----EecChhHHHHHHHHHHHh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-H----VTI----VARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-~----Vvl----~~R~~~~l~~~~~~l~~~  145 (475)
                      .|.|+|++|.+|.++|-.|+..|. .    |.+    ++++++.++..+-+|...
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~  100 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDS  100 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHh
Confidence            689999999999999999998875 4    444    488999888887777654

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=93.60  E-value=0.77  Score=47.90  Aligned_cols=42  Identities=29%  Similarity=0.320  Sum_probs=31.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEE-EecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl-~~R~~~~l~~~  138 (475)
                      ..|++++| +|+++||..++..+...|+++++ ++++.++++.+
T Consensus       184 ~~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a  226 (393)
T TIGR02819       184 GPGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA  226 (393)
T ss_pred             CCCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH
Confidence            35789999 55699999999888889997554 56666555543

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=93.55  E-value=0.44  Score=47.59  Aligned_cols=42  Identities=24%  Similarity=0.262  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .+++++|.|+++++|.++++.....|++|+++.+++++.+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999999999999999999988776554

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.54  E-value=0.4  Score=50.14  Aligned_cols=48  Identities=21%  Similarity=0.347  Sum_probs=42.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      +++++++||.|+ |-+|.-+|++|+++|. +|+++.|+.++.++++.++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            489999999996 4799999999999995 89999999999998887764

>PLN02602 lactate dehydrogenase

Probab=93.50  E-value=1.6  Score=45.00  Aligned_cols=46  Identities=20%  Similarity=0.285  Sum_probs=39.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      +.|.|+|+ |.+|.++|..|+..|.  .++++|.+++.++..+.++...
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~   85 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHA   85 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhh
Confidence            58899996 9999999999998886  6999999998887777777654

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.50  E-value=0.4  Score=47.00  Aligned_cols=42  Identities=26%  Similarity=0.228  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +|++++|.|+++++|.++++.+...|++|++++++.++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999998887766544

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=93.48  E-value=1.3  Score=44.82  Aligned_cols=44  Identities=20%  Similarity=0.237  Sum_probs=37.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      |.|.|+ |.+|..+|..|+..|.  .++++|.+++.++..+.+|...
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~   47 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHA   47 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhh
Confidence            568887 9999999999999886  6999999988888777777654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=93.47  E-value=0.41  Score=49.15  Aligned_cols=41  Identities=32%  Similarity=0.340  Sum_probs=35.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|+|.|+ ++||...++.+...|+ +|++++++.++++.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~  228 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA  228 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5789999985 8999999988888999 799999998776644

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=93.45  E-value=0.43  Score=47.80  Aligned_cols=43  Identities=23%  Similarity=0.245  Sum_probs=36.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .+|.+++|.|+++++|.+++......|++|+++.++.++.+.+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            3578999999999999999998889999999999887765544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=93.43  E-value=0.27  Score=52.02  Aligned_cols=77  Identities=19%  Similarity=0.217  Sum_probs=56.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ...++++|.|+ |.+|..+++.|.+.|.+|++++++++..+++.++.                            ..+.+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----------------------------~~~~~  279 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----------------------------PNTLV  279 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----------------------------CCCeE
Confidence            45688999998 89999999999999999999999988766554421                            12456


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                      +..|.+ +.+.++++      .....|.+|...
T Consensus       280 i~gd~~-~~~~L~~~------~~~~a~~vi~~~  305 (453)
T PRK09496        280 LHGDGT-DQELLEEE------GIDEADAFIALT  305 (453)
T ss_pred             EECCCC-CHHHHHhc------CCccCCEEEECC
Confidence            788998 76655433      123567776544

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=93.43  E-value=0.52  Score=46.57  Aligned_cols=42  Identities=29%  Similarity=0.344  Sum_probs=36.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.+++|.|+++++|.++++.....|++|+.+.++.++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999998887765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=93.42  E-value=0.12  Score=46.98  Aligned_cols=44  Identities=30%  Similarity=0.386  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|.|.-+|+-++..|.++|++|.++..+...+++
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            57999999999999999999999999999999999887655544

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.40  E-value=0.35  Score=51.26  Aligned_cols=37  Identities=27%  Similarity=0.266  Sum_probs=33.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      +.+|+++|+|.+ |+|.++|+.|+++|++|++.+.+..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            568899999986 9999999999999999999987654

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.39  E-value=0.15  Score=51.16  Aligned_cols=44  Identities=23%  Similarity=0.133  Sum_probs=39.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|.|+-+|+.+|..|.++|++|+++.+....+++
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e  198 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA  198 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            58899999999999999999999999999999999877654443

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=93.34  E-value=0.37  Score=47.90  Aligned_cols=43  Identities=16%  Similarity=0.217  Sum_probs=37.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      ..|.+++|.|+++++|.++++.+...|++|+++.++.++.+.+
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            3578999999999999999999999999999998887765543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=93.33  E-value=0.39  Score=49.75  Aligned_cols=38  Identities=26%  Similarity=0.387  Sum_probs=32.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL  135 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l  135 (475)
                      .|++++|.|+ |+||...++.....|++|++++++.++.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~  215 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKE  215 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHh
Confidence            5889999886 8999999998888999999988876543

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.28  E-value=0.36  Score=48.47  Aligned_cols=41  Identities=15%  Similarity=0.220  Sum_probs=33.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      ++++++||++++|..+++.....|++|++++++.++.+.+.
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~  185 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK  185 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            44555699999999998888888999999999887766543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK06223 malate dehydrogenase; Reviewed

Probab=93.27  E-value=1.6  Score=43.76  Aligned_cols=43  Identities=19%  Similarity=0.178  Sum_probs=34.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      +.+.|.|+ |-+|..+|..++..|. .|++++++++.++....++
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl   46 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI   46 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH
Confidence            36889998 8899999999999875 9999999888765544333

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=93.27  E-value=0.35  Score=49.75  Aligned_cols=41  Identities=32%  Similarity=0.433  Sum_probs=34.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++|+|+|+ ++||...+..+...|+ +|+++++++++++.+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a  232 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA  232 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH
Confidence            4789999985 8999999888888999 699999988876644

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.27  E-value=0.19  Score=50.09  Aligned_cols=42  Identities=26%  Similarity=0.294  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL  135 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l  135 (475)
                      .++.||+++|.|+|+-.|+.++..|.++|++|+++.|....+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L  196 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL  196 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH
Confidence            578999999999998899999999999999999999855443

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=93.23  E-value=0.47  Score=48.46  Aligned_cols=41  Identities=24%  Similarity=0.337  Sum_probs=34.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|+++||+| ++++|.+++..+...|+ +|+++++++++.+.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            688999997 59999999998889999 999998887765433

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=93.11  E-value=0.31  Score=48.56  Aligned_cols=46  Identities=24%  Similarity=0.273  Sum_probs=37.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      .|.+++|+||+|..|.-..+----.|++|+-++-..++.+-+.+++
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l  195 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL  195 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc
Confidence            4899999999999997666555567999999999888877666654

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=93.06  E-value=0.55  Score=48.47  Aligned_cols=41  Identities=24%  Similarity=0.383  Sum_probs=35.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+++|.| +++||++++..+...|+ +|++++++.++++.+
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a  231 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA  231 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            478999996 68999999999999999 899999988776655

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.05  E-value=0.47  Score=40.68  Aligned_cols=31  Identities=35%  Similarity=0.382  Sum_probs=26.9

Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252         109 GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus       109 GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      |||...+..+...|++|+++++++++++.+.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~   31 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK   31 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            6899999999999999999999988776543

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=93.02  E-value=0.35  Score=49.52  Aligned_cols=41  Identities=32%  Similarity=0.438  Sum_probs=34.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~  138 (475)
                      .|++++|.|+ +++|...+..+...|++ |+.++++.++++.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~  217 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA  217 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999985 99999999888888994 98899988776654

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02827 Alcohol dehydrogenase-like

Probab=93.02  E-value=0.54  Score=48.68  Aligned_cols=41  Identities=27%  Similarity=0.280  Sum_probs=33.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~  138 (475)
                      .|++++|+|+ |+||..+++.+...|++ |++++++.++.+.+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a  234 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA  234 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            5889999985 99999999888889984 77788887766543

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=93.00  E-value=0.52  Score=51.80  Aligned_cols=35  Identities=23%  Similarity=0.266  Sum_probs=30.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      +++.+|+|.|+ ||||-.+|+.|+..|. +++++|.+
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D  371 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNG  371 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            46788999885 6999999999999998 89998864

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=92.94  E-value=0.59  Score=47.20  Aligned_cols=35  Identities=29%  Similarity=0.429  Sum_probs=31.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      .|.+++|+|+++++|.++++.....|++|+.+.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            48999999999999999999999999998887765

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.89  E-value=0.3  Score=48.65  Aligned_cols=43  Identities=23%  Similarity=0.294  Sum_probs=37.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      .++.||+|+|.|.|.-+|+-+|..|.++|++|.++......+.
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~  195 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS  195 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence            5789999999999999999999999999999999876554443

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=92.89  E-value=0.46  Score=49.22  Aligned_cols=42  Identities=24%  Similarity=0.275  Sum_probs=36.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.+++|+|++++||.+++..+...|++|+++.++.++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999998889999998888887776544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=92.85  E-value=0.54  Score=48.26  Aligned_cols=42  Identities=26%  Similarity=0.327  Sum_probs=35.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      ..|.+++|.| ++++|...++.+...|+ +|+.++++.++++.+
T Consensus       183 ~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         183 EPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            3578999997 59999999998888899 799999988776654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=92.84  E-value=0.74  Score=46.19  Aligned_cols=42  Identities=33%  Similarity=0.386  Sum_probs=37.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .+.+++|.|+++.+|.++++.+...|++|++++++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999988776654

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=92.82  E-value=0.3  Score=39.81  Aligned_cols=37  Identities=27%  Similarity=0.393  Sum_probs=32.2

Q ss_pred             CCChHHHHHHHHHHHcC---CEEEEE-ecChhHHHHHHHHH
Q psy3252         106 GSSGIGKHVAIEAAKRG---AHVTIV-ARDEKKLLQAQEEI  142 (475)
Q Consensus       106 as~GIG~aiA~~La~~G---a~Vvl~-~R~~~~l~~~~~~l  142 (475)
                      |+|.+|.++++.|++.|   .+|.++ +|++++.+++.++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            78999999999999999   899965 99999888776653

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=92.82  E-value=0.55  Score=48.86  Aligned_cols=42  Identities=17%  Similarity=0.220  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.+++|+|+++++|.+++..+...|++|+++.++.++.+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            478999999999999999999989999988888877655443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=92.72  E-value=0.55  Score=47.38  Aligned_cols=42  Identities=21%  Similarity=0.281  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .+.+++|.|+++++|.+++..+...|++|+++.+++++.+.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  206 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA  206 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999998766543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=92.63  E-value=0.46  Score=48.26  Aligned_cols=41  Identities=22%  Similarity=0.240  Sum_probs=34.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++++|+|+ +++|..+++.+...|+ +|++++++.++.+.+
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~  213 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA  213 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            5789999985 8999999999999999 898898888776544

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=92.61  E-value=0.91  Score=48.16  Aligned_cols=46  Identities=17%  Similarity=0.245  Sum_probs=37.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---CC----EEEEEec--ChhHHHHHHHHHHHh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR---GA----HVTIVAR--DEKKLLQAQEEIKKA  145 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~---Ga----~Vvl~~R--~~~~l~~~~~~l~~~  145 (475)
                      +|+||||+|-||.++.-+++.-   |.    .++|++.  +.+.++..+-+|...
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~  179 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDL  179 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHh
Confidence            6999999999999999999873   43    3677888  688888877777654

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=92.54  E-value=0.26  Score=52.32  Aligned_cols=40  Identities=33%  Similarity=0.510  Sum_probs=35.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      ++.|.||+|+||.++|+.|.+.|++|++++|+.+...+..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            5889999999999999999999999999999977654443

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=92.47  E-value=2.1  Score=43.22  Aligned_cols=43  Identities=16%  Similarity=0.301  Sum_probs=35.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .+.|.|+ |.+|..+|..|+..|  ..|+++++++++++..+.++.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~   46 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLA   46 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHH
Confidence            4778897 899999999999999  479999999887765444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=92.33  E-value=0.65  Score=46.84  Aligned_cols=41  Identities=27%  Similarity=0.327  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++++|.| ++++|.+++..+...|++|+++++++++++.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~  203 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA  203 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            578999999 89999999999989999999999988776544

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=92.31  E-value=0.65  Score=45.88  Aligned_cols=153  Identities=12%  Similarity=0.008  Sum_probs=73.5

Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhcccc------------chh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYH------------TRL  240 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~  240 (475)
                      ..-+..|.- +.+--+.+++.+++.+|.+|.+|+.-.......  --+.+-++..-++.-+...-            .++
T Consensus       105 AksingDaF-S~e~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~--pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~l  181 (398)
T COG3007         105 AKSINGDAF-SDEMKQKVIEAIKQDFGKVDLVVYSLASPRRKH--PKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATL  181 (398)
T ss_pred             eeecccchh-hHHHHHHHHHHHHHhhccccEEEEeccCccccC--CCcchhhHhhhcchhhhccccccccccceeeeeec
Confidence            345677888 667778889999999999999998754321110  00111111110000000000            000


Q ss_pred             hccccchh-hhhhHHHHH---HHHHHHHHHHHhCCCCeEEEeccccccc--cCCCChhhHHHHHHHHHHHHHHHHHHccC
Q psy3252         241 ALWRSWTV-IDLNLYGTI---HMTKALVEGMKQRGRGCIVITASQAANL--GIYGLAAYTSSKFALKGFAEALYMEVKQS  314 (475)
Q Consensus       241 ~~~~~~~v-~~vN~~g~~---~l~~~~lp~m~~~~~g~IV~iSS~a~~~--~~~~~~~Y~aSKaAl~~l~~sLa~El~~~  314 (475)
                      +.-...++ =.+-++|--   ..+.+++..-.-..+.+-|-.|-+...+  +.+..++-+.+|.=++.-++.+...|+..
T Consensus       182 epAseqEI~~Tv~VMGGeDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~  261 (398)
T COG3007         182 EPASEQEIADTVAVMGGEDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAAL  261 (398)
T ss_pred             ccccHHHHHHHHHhhCcchHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhc
Confidence            00000000 011111111   1233333221111223444444433322  44556788999999999999999999887


Q ss_pred             CcEEEEEeCCCCCC
Q psy3252         315 GLTITLCLPPDTDT  328 (475)
Q Consensus       315 gIrVn~V~PG~v~T  328 (475)
                      |=+.++.-.-.+-|
T Consensus       262 gG~A~vsVlKavVT  275 (398)
T COG3007         262 GGGARVSVLKAVVT  275 (398)
T ss_pred             CCCeeeeehHHHHh
Confidence            64554443333444

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=92.30  E-value=0.77  Score=46.05  Aligned_cols=30  Identities=27%  Similarity=0.370  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      |+|.| .||||-.+|+.|+..|. +++++|.+
T Consensus         2 VLIvG-aGGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           2 CLLLG-AGTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            56666 56999999999999998 78888764

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=92.26  E-value=1  Score=45.87  Aligned_cols=40  Identities=28%  Similarity=0.208  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK  134 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~  134 (475)
                      ..+.|+++.|.|. |.||.++|+.|...|++|++++++.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            3688999999975 679999999999999999999998754

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=92.25  E-value=0.67  Score=44.76  Aligned_cols=46  Identities=22%  Similarity=0.159  Sum_probs=39.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      +++.|+.||=.|+++|   -++..+|+.|++|+.+|-+++.++.+...-
T Consensus        56 ~~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha  101 (243)
T COG2227          56 FDLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHA  101 (243)
T ss_pred             cCCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhh
Confidence            4488999999999999   689999999999999999998887665443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=92.22  E-value=0.36  Score=44.51  Aligned_cols=43  Identities=23%  Similarity=0.126  Sum_probs=36.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      ...+.|+++.|.|. |.||+++|+.|..-|++|+.++|+.....
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            45678999999975 89999999999999999999999976544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=92.12  E-value=0.61  Score=46.97  Aligned_cols=37  Identities=24%  Similarity=0.259  Sum_probs=33.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      +|++++|.|+++++|.++++.+...|++|+++.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            5789999999999999999999999999988877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=92.11  E-value=2.9  Score=42.17  Aligned_cols=36  Identities=19%  Similarity=0.226  Sum_probs=30.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLL  136 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~  136 (475)
                      .+.|.|+ |-+|..+|..|+..|. +|++++.+++..+
T Consensus         3 KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~   39 (305)
T TIGR01763         3 KISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQ   39 (305)
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhH
Confidence            5778886 8899999999999886 8999999766433

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.02  E-value=0.3  Score=48.98  Aligned_cols=39  Identities=28%  Similarity=0.176  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA-RDE  132 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~-R~~  132 (475)
                      .++.||+|+|.|-++-+|+.+|..|+++|++|+++. |+.
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            578999999999999999999999999999999995 654

>KOG1196|consensus

Probab=92.00  E-value=0.93  Score=45.14  Aligned_cols=81  Identities=16%  Similarity=0.162  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|++++|.||+|..|.-.-+--.-.||+|+..+-+.++..-+..++    +.                      +    .
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~----G~----------------------d----~  202 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKF----GF----------------------D----D  202 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhcc----CC----------------------c----c
Confidence            5799999999999997655544456999998887777665444332    11                      0    1


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      ..|.- ++.++.+++.+...  ..||+.+-|.|.
T Consensus       203 afNYK-~e~~~~~aL~r~~P--~GIDiYfeNVGG  233 (343)
T KOG1196|consen  203 AFNYK-EESDLSAALKRCFP--EGIDIYFENVGG  233 (343)
T ss_pred             ceecc-CccCHHHHHHHhCC--CcceEEEeccCc
Confidence            12222 44455555555322  279999999984

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=92.00  E-value=0.67  Score=47.03  Aligned_cols=41  Identities=27%  Similarity=0.291  Sum_probs=34.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~  138 (475)
                      .|++++|+| ++++|..+++.+...|++ |++++++.++++.+
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~  201 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA  201 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            578999997 599999999988899997 67888888776643

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.92  E-value=0.54  Score=46.91  Aligned_cols=44  Identities=23%  Similarity=0.373  Sum_probs=38.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      +|.|.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+.+
T Consensus         7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~   50 (286)
T PRK07819          7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEK   50 (286)
T ss_pred             EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHH
Confidence            6777776 7999999999999999999999999998887766654

>PRK13243 glyoxylate reductase; Reviewed

Probab=91.83  E-value=1.1  Score=45.72  Aligned_cols=40  Identities=25%  Similarity=0.272  Sum_probs=35.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK  134 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~  134 (475)
                      ..+.||++.|.|- |.||+++|+.|...|++|+.++|+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4689999999997 899999999999999999999987543

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=91.79  E-value=0.27  Score=44.19  Aligned_cols=42  Identities=19%  Similarity=0.445  Sum_probs=35.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      |+.||+++-+|++||..|.++|.+|++.  +.+.-+.+..++..
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence            5789999999999999999999999998  55666666665543

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=91.74  E-value=0.45  Score=47.95  Aligned_cols=42  Identities=26%  Similarity=0.321  Sum_probs=36.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      +|.|+| +|-+|.++|..|+++|++|++++++++.++...+.+
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~   45 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYI   45 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHH
Confidence            588898 778999999999999999999999988777665443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	475
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		3e-14
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		3e-14
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		3e-14
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-14
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		4e-14
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		4e-14
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		5e-14
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		5e-14
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-14
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		6e-14
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		5e-13
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		2e-11
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-11
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-11
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		6e-11
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		1e-10
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-10
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-10
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		1e-10
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-10
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		1e-10
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-10
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		3e-10
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		5e-10
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		7e-10
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-09
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		5e-09
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		6e-09
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-09
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		9e-09
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		1e-08
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		1e-08
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-08
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		1e-08
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		1e-08
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-08
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-08
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-08
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		2e-08
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		2e-08
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-08
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-08
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-08
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		7e-08
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		8e-08
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		9e-08
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		9e-08
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-07
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-07
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		1e-07
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		2e-07
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		2e-07
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-07
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-07
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-07
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-07
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-07
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		3e-07
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		4e-07
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		5e-07
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		6e-07
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		6e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		6e-07
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		7e-07
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		7e-07
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		8e-07
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		8e-07
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		8e-07
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		9e-07
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-06
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-06
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-06
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-06
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		2e-06
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		2e-06
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-06
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		3e-06
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-06
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-06
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		3e-06
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		4e-06
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		5e-06
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		5e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-06
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		6e-06
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		6e-06
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		7e-06
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		8e-06
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-05
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-05
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-05
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-05
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-05
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-05
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		2e-05
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-05
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-05
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-05
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-05
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-05
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-05
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		3e-05
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-05
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		3e-05
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		3e-05
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		4e-05
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		4e-05
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		4e-05
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		5e-05
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		6e-05
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		6e-05
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		6e-05
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		7e-05
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		8e-05
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		8e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		1e-04
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-04
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-04
3l6e_A	235	Crystal Structure Of Putative Short Chain Dehydroge		1e-04
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		2e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		2e-04
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-04
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		2e-04
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		2e-04
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		3e-04
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-04
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		3e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		4e-04
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		4e-04
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		4e-04
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		4e-04
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		5e-04
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		6e-04
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		7e-04
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		7e-04
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		7e-04
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		7e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		9e-04

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 48/267 (17%)
Query: 90  MKRYLAPTNGTLSV-TGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPN 148
           M  +L+  +G  +V TGG+SGIG   A E A+RGA + +   D+  L QA   ++     
Sbjct: 22  MDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-- 79
Query: 149 PKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA 208
                   ++     C              D+    E +R A   A    G V ++ + A
Sbjct: 80  --------FDAHGVVC--------------DVRHLDEMVRLA-DEAFRLLGGVDVVFSNA 116
Query: 209 GMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMK 268
           G+ + G L +M   D                   WR W VID++L+G+IH  +A +  + 
Sbjct: 117 GIVVAGPLAQMNHDD-------------------WR-W-VIDIDLWGSIHAVEAFLPRLL 155
Query: 269 QRGRGC-IVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD 327
           ++G G  I  TAS A  +   GL  Y  +K+ + G AE L  EVK +G+ +++  P   +
Sbjct: 156 EQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVE 215
Query: 328 TPGFENEEKSKPRETSLISQTGGLYRP 354
           T    N E+ +  +  + +   G + P
Sbjct: 216 TKLVSNSERIRGADYGMSATPEGAFGP 242

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 48/229 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 31  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 80
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 81  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 125
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 126 --------LWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 164
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 165 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 48/229 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 27  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 76
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 77  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 121
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 122 --------LWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 160
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 161 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 48/229 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 31  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 80
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 81  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 125
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 126 --------LWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 164
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 165 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 48/229 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 27  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 76
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+   
Sbjct: 77  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELA-- 119
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 120 ------DELWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 160
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 161 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 48/229 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 31  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 80
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+   
Sbjct: 81  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELA-- 123
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 124 ------DELWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 164
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 165 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 48/229 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 11  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 60
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 61  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 105
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 106 --------LWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 144
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 145 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 193

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 48/229 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 31  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 80
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 81  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 125
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 126 --------LWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 164
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 165 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGWVETP 213

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 48/229 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A            E   +
Sbjct: 31  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG----------VEADGR 80
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C              D+ +    I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 81  TC--------------DV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 125
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVITAS 280
                   LWL              V++ NL G   +TK +++  GM +RG G IV  AS
Sbjct: 126 --------LWL-------------DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 164
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP
Sbjct: 165 TGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 213

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 51/233 (21%)
Query: 99  GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYE 158
           G + +TG S GIG+  A     +G  V ++ARDEK+L     E++ A P P  +R    E
Sbjct: 6   GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVR----E 61
Query: 159 EIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE 218
           E                       D+    +A++ A    G +  LVN AG+ +   + E
Sbjct: 62  E----------------------GDWARAVAAMEEAF---GELSALVNNAGVGVMKPVHE 96
Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           +T+++                   WR   V+D NL G     +  V  + +RG G IV  
Sbjct: 97  LTLEE-------------------WR--LVLDTNLTGAFLGIRHAVPALLRRGGGTIVNV 135
Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
            S A      G AAY +SKF L G A A  ++++++ + +   LP   DT GF
Sbjct: 136 GSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDT-GF 187

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 48/250 (19%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTG SSGIG  VA   A RG  V   ARD K +  A + ++ A  +           
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD----------- 74
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                        ++  S D++   E + +A+  A++R GP+ +LVN AG    G  E  
Sbjct: 75  -------------VDGSSCDVTSTDE-VHAAVAAAVERFGPIGILVNSAGRN--GGGETA 118
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE--GMKQRGRGCIVI 277
            + D                 ALW    V+D NL G   +T+ ++   GM++ G G IV 
Sbjct: 119 DLDD-----------------ALWAD--VLDTNLTGVFRVTREVLRAGGMREAGWGRIVN 159
Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS 337
            AS     G+   A YT+SK  + GF +++  E+ ++G+T+    P   +TP  E   + 
Sbjct: 160 IASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREG 219
Query: 338 KPRETSLISQ 347
             R   +  Q
Sbjct: 220 YARHWGVTEQ 229

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 23/156 (14%)
Query: 173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLW 232
           +  + LD++ D + + +A+   ++  G + +LVN AG+ L G +E+    D        W
Sbjct: 58  VHVLELDVA-DRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTD--------W 108
Query: 233 LRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAA 292
            R             +ID NL G ++MT+A +  +  R +G +V  +S A  + +   A 
Sbjct: 109 TR-------------MIDTNLLGLMYMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAV 154
Query: 293 YTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           Y ++KF +  F+E L  EV + G+ + +  P  TDT
Sbjct: 155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDT 190

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 47/222 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPN-PKFIRFIEYEEIK 161
           VTGG  GIG  +     K G  V                +    PN P+ ++++E     
Sbjct: 18  VTGGMGGIGTSICQRLHKDGFRV----------------VAGCGPNSPRRVKWLE----- 56
Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
               + K + F  Y S     D+++ + A        G + +LVN AG+       +MT 
Sbjct: 57  ----DQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTR 112
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                   W++  VID NL    ++TK +++GM +RG G I+  +S 
Sbjct: 113 ED-------------------WQA--VIDTNLTSLFNVTKQVIDGMVERGWGRIINISSV 151
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
               G +G   Y+++K  + GF  +L  EV   G+T+    P
Sbjct: 152 NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSP 193

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 49/221 (22%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSG G+ +A  A   G  V   AR  + L                      +++  
Sbjct: 10  VTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL----------------------DDLVA 47
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A P+       E +SLD++ D E I       + R G V +LVN AG    G  EE T +
Sbjct: 48  AYPDRA-----EAISLDVT-DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTER 101
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +++                      + +L+++G   +T+AL+   ++RG G +V  +S  
Sbjct: 102 ELR---------------------DLFELHVFGPARLTRALLPQXRERGSGSVVNISSFG 140
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
             L   G +AY+++K AL+  +E L  EV   G+ + +  P
Sbjct: 141 GQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEP 181

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 22/155 (14%)
Query: 175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLR 234
           YV LD+++  +  ++A+  A+   G +++LVN AG+   GT+E+  + +        W R
Sbjct: 57  YVHLDVTQPAQ-WKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTE--------WQR 107
Query: 235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYT 294
                        ++D+NL G     +A+V+ MK+ GRG I+  +S     G      YT
Sbjct: 108 -------------ILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYT 154
Query: 295 SSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           ++KFA++G  ++  +E+  SG+ +    P    TP
Sbjct: 155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 189

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 46/211 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG   G+GK+ ++E AK GA V  V  D    L  Q    KA         +  +EI K
Sbjct: 13  ITGAGGGLGKYYSLEFAKLGAKV--VVNDLGGALNGQGGNSKAAD-------VVVDEIVK 63
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSA---LQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                        V++    DY N+      ++ A+   G V++++N AG+    ++++M
Sbjct: 64  NGG----------VAV---ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKM 110
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           T +D K+                     VID++L G   +TKA     +++  G IV T+
Sbjct: 111 TEKDYKL---------------------VIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTS 149
Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYME 310
           S A   G +G A Y S+K AL GFAE L  E
Sbjct: 150 SPAGLYGNFGQANYASAKSALLGFAETLAKE 180

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 56/232 (24%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAH---VTIVARDEK---KLLQAQEEIKKACPNPKFIRFIE 156
           +TG SSGIG H+A+  A   +    V    RD K   +L +A   +              
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-------------- 52
Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                 ACP       +E + LD+ +D +++ +A +   +  G V +LV  AG+ L G L
Sbjct: 53  ------ACPPGS----LETLQLDV-RDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPL 99
Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           E +    +                      +V+D+N+ GT+ M +A +  MK+RG G ++
Sbjct: 100 EALGEDAVA---------------------SVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL--CLPPDT 326
           +T S    +G+     Y +SKFAL+G  E+L + +   G+ ++L  C P  T
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 56/232 (24%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAH---VTIVARDEK---KLLQAQEEIKKACPNPKFIRFIE 156
           +TG SSGIG H+A+  A   +    V    RD K   +L +A   +              
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-------------- 52
Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                 ACP       +E + LD+ +D +++ +A +   +  G V +LV  AG+ L G L
Sbjct: 53  ------ACPPGS----LETLQLDV-RDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPL 99
Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           E +    +                      +V+D+N+ GT+ M +A +  MK+RG G ++
Sbjct: 100 EALGEDAVA---------------------SVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL--CLPPDT 326
           +T S    +G+     Y +SKFAL+G  E+L + +   G+ ++L  C P  T
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLW 232
           +  + LD++ D + + +A+   ++  G + +LVN AG+ L G +E+    D        W
Sbjct: 58  VHVLELDVA-DRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTD--------W 108
Query: 233 LRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAA 292
            R              ID NL G  + T+A +  +  R +G +V  +S A  + +   A 
Sbjct: 109 TR-------------XIDTNLLGLXYXTRAALPHLL-RSKGTVVQXSSIAGRVNVRNAAV 154
Query: 293 YTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           Y ++KF +  F+E L  EV + G+ + +  P  TDT
Sbjct: 155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDT 190

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 56/232 (24%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAH---VTIVARDEK---KLLQAQEEIKKACPNPKFIRFIE 156
           +TG SSGIG H+A+  A   +    V    RD K   +L +A   +              
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-------------- 52
Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                 ACP       +E + LD+ +D +++ +A +   +  G V +LV  AG+ L G L
Sbjct: 53  ------ACPPGS----LETLQLDV-RDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPL 99
Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           E +    +                      +V+D+N+ GT+ M +A +  MK+RG G ++
Sbjct: 100 EALGEDAVA---------------------SVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL--CLPPDT 326
           +T S    +G+     Y +SKFAL+G  E+L + +   G+ ++L  C P  T
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 56/232 (24%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAH---VTIVARDEK---KLLQAQEEIKKACPNPKFIRFIE 156
           +TG SSGIG H+A+  A   +    V    RD K   +L +A   +              
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-------------- 52
Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                 ACP       +E + LD+ +D +++ +A +   +  G V +LV  AG+ L G L
Sbjct: 53  ------ACPPGS----LETLQLDV-RDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPL 99
Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           E +    +                      +V+D+N+ GT+ M +A +  MK+RG G ++
Sbjct: 100 EALGEDAVA---------------------SVLDVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL--CLPPDT 326
           +T S    +G+     Y +SKFAL+G  E+L + +   G+ ++L  C P  T
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 50/229 (21%)
Query: 103 VTGGSSGIGKHVAIEAAK---RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           +TG SSGIG H+A+  A    +   V    RD    L+ Q  + +A              
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRD----LKTQGRLWEAAR------------ 50
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
              ACP       +E + LD+ +D +++ +A +   +  G V +LV  AG+ L G LE +
Sbjct: 51  -ALACPPGS----LETLQLDV-RDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEAL 102
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
               +                      +V+D+N+ GT+ M +A +  MK+RG G +++T 
Sbjct: 103 GEDAVA---------------------SVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTG 141
Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL--CLPPDT 326
           S    +G+     Y +SKFAL+G  E+L + +   G+ ++L  C P  T
Sbjct: 142 SVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLR 234
           YV LD+++  +  ++A+  A+   G +++LVN AG+   GT+E+  + +        W R
Sbjct: 57  YVHLDVTQPAQ-WKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTE--------WQR 107
Query: 235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYT 294
                        ++D+NL G     +A+V+  K+ GRG I+  +S     G      YT
Sbjct: 108 -------------ILDVNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYT 154
Query: 295 SSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           ++KFA++G  ++  +E+  SG+ +    P    TP
Sbjct: 155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 189

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 56/232 (24%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAH---VTIVARDEK---KLLQAQEEIKKACPNPKFIRFIE 156
           +TG SSGIG H+A+  A   +    V    RD K   +L +A   +              
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-------------- 52
Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                 ACP       +E + LD+ +D +++ +A +   +  G V +LV  AG+ L G L
Sbjct: 53  ------ACPPGS----LETLQLDV-RDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPL 99
Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           E +    +                      +V+++N+ GT+ M +A +  MK+RG G ++
Sbjct: 100 EALGEDAVA---------------------SVLEVNVVGTVRMLQAFLPDMKRRGSGRVL 138
Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL--CLPPDT 326
           +T S    +G+     Y +SKFAL+G  E+L + +   G+ ++L  C P  T
Sbjct: 139 VTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 47/228 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIGK +A+   K G  V I   ++        EI +A  +   ++         
Sbjct: 7   VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVK--------- 57
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +D+S D + + +A++ A    G   ++VN AG+A    +E +T +
Sbjct: 58  ---------------VDVS-DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPE 101
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA-SQ 281
            +                       V ++N+ G I   +A VE  K+ G G  +I A SQ
Sbjct: 102 IVD---------------------KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ 140
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A ++G   LA Y+SSKFA++G  +    ++   G+T+    P    TP
Sbjct: 141 AGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 103/256 (40%), Gaps = 53/256 (20%)
Query: 94  LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIR 153
           L    G   +TG S GIG  +A   A  G  V ++AR ++ L +  +EI ++        
Sbjct: 3   LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRS-------- 54
Query: 154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
                   K    P  +       LDI+ D     + ++    + G V +LVN A     
Sbjct: 55  -------NKHVQEPIVL------PLDIT-DCTKADTEIKDIHQKYGAVDILVNAAAXFXD 100
Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
           G+L E      K+ E                      +N+     + K + E  K +  G
Sbjct: 101 GSLSEPVDNFRKIXE----------------------INVIAQYGILKTVTEIXKVQKNG 138
Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTD---- 327
            I   AS+AA  G      Y S+KFAL G AE+LY E+   G+ +T   P   +TD    
Sbjct: 139 YIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDXAKK 198
Query: 328 --TPGFENEEKSKPRE 341
             TP F++EE  +P +
Sbjct: 199 AGTP-FKDEEXIQPDD 213

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 47/222 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +AI+ AK+GA+V +  A +E+K  +  +EIKK   +   +R        
Sbjct: 9   VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR-------- 60
Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            D++ + E++ + ++  +D  G V +LVN AG+    T + + M
Sbjct: 61  ----------------ADVA-NAEDVTNMVKQTVDVFGQVDILVNNAGV----TKDNLLM 99
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +    M++  W              TVI+ NL G    TKA+   M ++  G IV  AS 
Sbjct: 100 R----MKEEEW-------------DTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASV 142
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
               G  G A Y ++K  + G  +    E+    +T+    P
Sbjct: 143 VGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAP 184

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 51/236 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIGK +A   A+RGA V   A  E     AQ        N K +          
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYLGDNGKGMAL-------- 65
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              NP                 E+I + L+   D  G V +LVN AG+    T + + M+
Sbjct: 66  NVTNP-----------------ESIEAVLKAITDEFGGVDILVNNAGI----TRDNLLMR 104
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M++  W               +++ NL     ++KA++ GM ++ +G I+   S  
Sbjct: 105 ----MKEEEW-------------SDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV 147
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTDTPGFENEEK 336
             +G  G A Y ++K  + GF +++  EV   G+T+    P   +TD     N+E+
Sbjct: 148 GTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ 203

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 51/236 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIGK +A   A+RGA V   A  E     AQ        N K +          
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYLGDNGKGMAL-------- 65
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              NP                 E+I + L+   D  G V +LVN AG+    T + + M+
Sbjct: 66  NVTNP-----------------ESIEAVLKAITDEFGGVDILVNNAGI----TRDNLLMR 104
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M++  W               +++ NL     ++KA++ GM ++ +G I+   S  
Sbjct: 105 ----MKEEEW-------------SDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV 147
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTDTPGFENEEK 336
             +G  G A Y ++K  + GF +++  EV   G+T+    P   +TD     N+E+
Sbjct: 148 GTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETDMTKALNDEQ 203

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIG+  A+  A+ GA V + AR+   L +  +EI                    
Sbjct: 13  VTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAA------------ 60
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSAL-QPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                        ++ D+    E +  AL + A+ R G +    N AG    G + E++ 
Sbjct: 61  ------------ALAGDVGD--EALHEALVELAVRRFGGLDTAFNNAGA--LGAMGEISS 104
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
             ++                 WR    +D NL       K  V  +   G G +  T+S 
Sbjct: 105 LSVEG----------------WRE--TLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSF 146
Query: 282 AAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG-FENEEKSKP 339
             +  G  G+A Y +SK  L G  +AL +E+   G+ +   LP  TDTP  F N   + P
Sbjct: 147 VGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAP 206
Query: 340 RETSLISQTGGL---YRPEVVKQSGL 362
                +     L    RPE + ++ L
Sbjct: 207 ETRGFVEGLHALKRIARPEEIAEAAL 232

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 22  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 66
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 67  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 102
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 103 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 154
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 155 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 214
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S L  TL +
Sbjct: 215 HMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 251

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 33  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 77
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 78  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 113
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 114 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 165
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 166 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 225
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S L  TL +
Sbjct: 226 HMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 262

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 48/223 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKF-IRFIEYEEIK 161
           +TG SSGIG  +A   AK GAH+ +VAR   +L +A   +K+     KF +R +E     
Sbjct: 12  ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE-----KFGVRVLE----- 61
Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         V++D++   E + + ++      G   +LVN AG        E  M
Sbjct: 62  --------------VAVDVATP-EGVDAVVESVRSSFGGADILVNNAGTG----SNETIM 102
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +      Q  W                 +L++   + + + LV GM+ RG G I+  AS 
Sbjct: 103 EAADEKWQFYW-----------------ELHVMAAVRLARGLVPGMRARGGGAIIHNASI 145
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP 324
            A   ++    Y  +K AL  F++ L  EV +  + +  C+ P
Sbjct: 146 CAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN-CINP 187

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 19  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 63
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 64  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 99
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 100 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 151
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 152 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 211
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S L  TL +
Sbjct: 212 HMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 248

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 20  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 64
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 65  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 100
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 101 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 152
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 153 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 212
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S L  TL +
Sbjct: 213 HMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 249

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 14  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 58
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 59  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 94
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 95  HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 146
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 147 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 206
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S L  TL +
Sbjct: 207 HMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 243

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 29  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 73
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 74  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 109
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 110 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 161
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 162 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 221
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S L  TL +
Sbjct: 222 HMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 258

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 51/236 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIGK +A   A+RGA V   A  E     AQ        N K +          
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYLGDNGKGMAL-------- 65
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              NP                 E+I + L+   D  G V +LVN AG+    T + + M+
Sbjct: 66  NVTNP-----------------ESIEAVLKAITDEFGGVDILVNNAGI----TRDNLLMR 104
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M++  W               +++ NL     ++KA++ GM ++ +G I+   S  
Sbjct: 105 ----MKEEEW-------------SDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV 147
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTDTPGFENEEK 336
             +G  G A + ++K  + GF +++  EV   G+T+    P   +TD     N+E+
Sbjct: 148 GTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ 203

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 36  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 80
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 81  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 116
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 117 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQS-NGSIVVVSSL 168
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 169 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 228
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S L  TL +
Sbjct: 229 HMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 265

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + G G+  A+  A+ GA   I+A D  K ++A   +  A P        E  ++ K
Sbjct: 16  VTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGV-VDTAIPASTPEDLAETADLVK 72
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG-TLEEMTM 221
                   R I    +D+ +DY+ +++A+   +++ G + ++V  AG+   G TL++ + 
Sbjct: 73  G-----HNRRIVTAEVDV-RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWT-VIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
           +D                      WT +ID+NL G     KA V  M   GRG  +I  S
Sbjct: 127 ED----------------------WTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS 164
Query: 281 QAANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
               L  Y     Y ++K  + G   A  +E+ Q  + +    P    TP   NE
Sbjct: 165 SVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNE 219

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 97/236 (41%), Gaps = 51/236 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIGK +A   A+RGA V   A  E     AQ        N K +          
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYLGDNGKGMAL-------- 65
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              NP                 E+I + L+   D  G V +LVN A +    T + + M+
Sbjct: 66  NVTNP-----------------ESIEAVLKAITDEFGGVDILVNNAAI----TRDNLLMR 104
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M++  W               +++ NL     ++KA++ GM ++ +G I+   S  
Sbjct: 105 ----MKEEEW-------------SDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV 147
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTDTPGFENEEK 336
             +G  G A Y ++K  + GF +++  EV   G+T+    P   +TD     N+E+
Sbjct: 148 GTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ 203

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKF-IRFIEYEEIK 161
           +TG SSGIG  +A   AK GAH+ +VAR   +L +A   +K+     KF +R +E     
Sbjct: 12  ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE-----KFGVRVLE----- 61
Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         V++D++   E + + ++      G   +LVN AG        E  M
Sbjct: 62  --------------VAVDVATP-EGVDAVVESVRSSFGGADILVNNAGTG----SNETIM 102
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +      Q  W                 +L +   + + + LV GM+ RG G I+  AS 
Sbjct: 103 EAADEKWQFYW-----------------ELLVMAAVRLARGLVPGMRARGGGAIIHNASI 145
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP 324
            A   ++    Y  +K AL  F++ L  EV +  + +  C+ P
Sbjct: 146 CAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN-CINP 187

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 97/236 (41%), Gaps = 51/236 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIGK +A   A+RGA V   A  E     AQ        N K +          
Sbjct: 17  VTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYLGDNGKGMAL-------- 65
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              NP                 E+I + L+   D  G V +LVN A +    T + + M+
Sbjct: 66  NVTNP-----------------ESIEAVLKAITDEFGGVDILVNNADI----TRDNLLMR 104
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M++  W               +++ NL     ++KA++ GM ++ +G I+   S  
Sbjct: 105 ----MKEEEW-------------SDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV 147
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTDTPGFENEEK 336
             +G  G A Y ++K  + GF +++  EV   G+T+    P   +TD     N+E+
Sbjct: 148 GTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ 203

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 39  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 83
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 84  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 119
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 120 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 171
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 172 AGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 231
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S    TL +
Sbjct: 232 HMQAAPKEECALEIIKGGALRQEEVYYDSSRWTTLLI 268

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 87  HLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI-KKA 145
           H Q K+ L   N  + VTG S GIG+  A+  A+ GA V ++ R+E+KL +  + I  + 
Sbjct: 4   HYQPKQDLL-QNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQ 62
Query: 146 CPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLV 205
              P++          + C           V+  I+  Y  +   L  A           
Sbjct: 63  HVQPQWFTLDLLTCTAEEC---------RQVADRIAAHYPRLDGVLHNA----------- 102
Query: 206 NCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE 265
                 L G +  M+ QD ++                W+   V+ +N+  T  +T+AL+ 
Sbjct: 103 -----GLLGEIGPMSEQDPQI----------------WQD--VMQVNVNATFMLTQALLP 139
Query: 266 GMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD 325
            + +   G +V T+S     G     AY +SKFA +G  + L  E +   L +    P  
Sbjct: 140 LLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLRVNCINPGG 199
Query: 326 TDT 328
           T T
Sbjct: 200 TRT 202

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 34/235 (14%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  +TGG+ G+G+  A+  A+ GA + I  R E   +     +  A    + +  +E  +
Sbjct: 12  TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYP-LATADDLAETVALVE--K 68
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
             + C + K         +D+ KD   + S +  A D  G + + +  AG++    L E+
Sbjct: 69  TGRRCISAK---------VDV-KDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEV 118
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
                   E   W               VI  NL GT +   A+  GM +R  G IV  +
Sbjct: 119 --------ESAQWDE-------------VIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVS 157
Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
           S   +   +  A+Y SSK+ + G  +    ++   G+T+    P + +TP   N+
Sbjct: 158 SMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHND 212

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 39  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 83
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 84  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 119
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 120 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 171
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 172 AGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 231
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S    TL +
Sbjct: 232 HMQAAPKEECALEIIKGGALRQEEVYYDSSRWTTLLI 268

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 46/230 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG+ +A   A+ GA+V + AR  ++L     E+ +                  
Sbjct: 46  VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE-----------------L 88
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              N   +R      LD+S D  +   A +  +D  G + ++   AG+     L+ MT +
Sbjct: 89  GAGNVIGVR------LDVS-DPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPE 141
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            +                       V+D+N+ GT++  +A +  +   GRG +++T+S  
Sbjct: 142 QLS---------------------EVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSIT 180
Query: 283 ANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
             +  Y G + Y +SK A  GF     +E+   G+T+   LP +  T G 
Sbjct: 181 GPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL 230

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 50/239 (20%)
Query: 91  KRYLAP--TNGTLS-VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACP 147
           + YLAP    G ++ VTGG++GIGK +  E  + G++V I +R  ++L  A +E++   P
Sbjct: 8   RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP 67
Query: 148 NPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNC 207
             K  R I                    +  +I ++ E + + ++  +D  G +  LVN 
Sbjct: 68  PTKQARVIP-------------------IQCNI-RNEEEVNNLVKSTLDTFGKINFLVNN 107
Query: 208 AGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEG- 266
            G       E ++             +G+H          V++ NL GT +M KA+    
Sbjct: 108 GGGQFLSPAEHISS------------KGWH---------AVLETNLTGTFYMCKAVYSSW 146
Query: 267 MKQRGRGCIVITASQAANLGIYGLAAYT-SSKFALKGFAEALYMEVKQSGLTITLCLPP 324
           MK+ G   + I     A    + LA ++ +++  +    ++L +E   SG+ I  C+ P
Sbjct: 147 MKEHGGSIVNIIVPTKAG---FPLAVHSGAARAGVYNLTKSLALEWACSGIRIN-CVAP 201

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 58/277 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 19  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 63
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 64  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 99
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 100 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 151
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 152 AGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 211
Query: 333 NEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCL 368
           + + +   E +L I + G L + EV   S    TL +
Sbjct: 212 HMQAAPKEECALEIIKGGALRQEEVYYDSSRWTTLLI 248

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 57/265 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L    +++   C            E+  
Sbjct: 33  VTGASKGIGREMAYHLAKMGAHVVVTARSKETL----QKVVSHCL-----------ELGA 77
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +             I+   E++  A Q            V  AG  L G L+ + + 
Sbjct: 78  ASAHY------------IAGTMEDMTFAEQ-----------FVAQAG-KLMGGLDMLILN 113
Query: 223 DIKVMEQPLWLRG-YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            I      L+    +H R ++       ++N    + +T A +  +KQ   G IV+ +S 
Sbjct: 114 HITNTSLNLFHDDIHHVRKSM-------EVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSL 165
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT-------PGFE 332
           A  +    +AAY++SKFAL GF  ++  E  V +  ++ITLC+    DT        G  
Sbjct: 166 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 225
Query: 333 NEEKSKPRETSLISQTGGLYRPEVV 357
           + + +   E +L    GG  R E V
Sbjct: 226 HMQAAPKEECALEIIKGGALRQEEV 250

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 91/229 (39%), Gaps = 39/229 (17%)
Query: 101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           L +TG   GIG+ +A+E A+   H      D + +L                   + E+I
Sbjct: 5   LLITGAGKGIGRAIALEFARAARH----HPDFEPVLVLSSRTAA-----------DLEKI 49
Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
              C     +   + ++ DIS D  ++R      ++R G +  LVN AG+   G L ++T
Sbjct: 50  SLECRAEGAL--TDTITADIS-DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLT 106
Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            +D                         ++ NL GT  +T+AL   M+++  G I    S
Sbjct: 107 EEDFDY---------------------TMNTNLKGTFFLTQALFALMERQHSGHIFFITS 145
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
            AA       + Y  SKF  +G  E + +  ++  + IT   P    TP
Sbjct: 146 VAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTP 194

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 86/229 (37%), Gaps = 49/229 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG SGIG+  A   AK GA+V +   +E   ++   EI                    
Sbjct: 32  VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKA---------------- 75
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                    F   V +  +KD E   S ++    + G V +LVN AG    G        
Sbjct: 76  ---------FGVRVDVSSAKDAE---SXVEKTTAKWGRVDVLVNNAGFGTTG-------- 115
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           ++  + +  W R             +  +N+ G    +K ++   ++ G G I+ T S  
Sbjct: 116 NVVTIPEETWDR-------------IXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTSYT 162
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
           A   I    AY +SK A+     A   +  + G+ +    P   D+P F
Sbjct: 163 ATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYF 211

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A   A +GA + +                       F    E E+++ 
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVL---------------------NGFGDAAEIEKVRA 47
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  ++ + Y   D+SK  E +R  +  A+ + G + +LVN AG+     +E+   +
Sbjct: 48  GLAAQHGVKVL-YDGADLSKG-EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W +  ++ LNL    H T A +  MK++G G I+  AS  
Sbjct: 106 K-------------------WDA--ILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH 144
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
             +     +AY ++K  + GF +   +E    G+T     P    TP  E +
Sbjct: 145 GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ 196

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 50/230 (21%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTGG++G+G  +  +   +G  V I    +  + +A   ++     P+ +       
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG------ 63
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                           V LD++   E  + A      R GPV +L N AG+ L   +EE 
Sbjct: 64  ----------------VQLDVAS-REGFKMAADEVEARFGPVSILCNNAGVNLFQPIEES 106
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR------G 273
           +  D        WL G               +NL+G ++     V  M +R +      G
Sbjct: 107 SYDDWD------WLLG---------------VNLHGVVNGVTTFVPRMVERVKAGEQKGG 145
Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            +V TAS AA L       Y ++KFA++G +E+L+  + +  + +++  P
Sbjct: 146 HVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCP 195

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 53/240 (22%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A+E A+RGA V   A  E       E I  A             E + 
Sbjct: 33  VTGASRGIGRAIALELARRGAMVIGTATTEA----GAEGIGAAFKQAGL-------EGRG 81
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  N                D   + + ++  +   G + +LVN AG+    T +++ M+
Sbjct: 82  AVLN--------------VNDATAVDALVESTLKEFGALNVLVNNAGI----TQDQLAMR 123
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE-GMKQRGRGCIVITASQ 281
               M+   W               VID NL     +++A++   MK RG G IV   S 
Sbjct: 124 ----MKDDEW-------------DAVIDTNLKAVFRLSRAVLRPMMKARG-GRIVNITSV 165
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP---DTD-TPGFENEEKS 337
             + G  G   Y ++K  + G   AL  E+   G+T+  C+ P   DTD T G   E+++
Sbjct: 166 VGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVN-CVAPGFIDTDMTKGLPQEQQT 224

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 49/227 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   A RGA V   A  E     AQ        N K +          
Sbjct: 10  VTGASRGIGRAIAETLAARGAKVIGTATSENG---AQAISDYLGANGKGLM--------- 57
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          L+++ D  +I S L+      G V +LVN AG+    T + + M+
Sbjct: 58  ---------------LNVT-DPASIESVLEKIRAEFGEVDILVNNAGI----TRDNLLMR 97
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M+   W               +I+ NL     ++KA++  M ++  G I+   S  
Sbjct: 98  ----MKDEEW-------------NDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVV 140
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
             +G  G A Y ++K  L GF+++L  EV   G+T+ +  P   +T 
Sbjct: 141 GTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD 187

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 54/228 (23%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI--VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           VTG  +G+G+  A+  A+RGA V +  +  D K + +      K             EEI
Sbjct: 35  VTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVV-----------EEI 83
Query: 161 K----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
           +    KA  N   +   E V              ++ A+D  G + ++VN AG+    + 
Sbjct: 84  RRRGGKAVANYDSVEEGEKV--------------VKTALDAFGRIDVVVNNAGILRDRSF 129
Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID-LNLYGTIHMTKALVEGMKQRGRGCI 275
             ++ +D                      W +I  ++L G+  +T+A  E MK++  G I
Sbjct: 130 ARISDED----------------------WDIIHRVHLRGSFQVTRAAWEHMKKQKYGRI 167
Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           ++T+S +   G +G A Y+++K  L G A +L +E ++S +      P
Sbjct: 168 IMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAP 215

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 45/228 (19%)
Query: 87  HLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC 146
           H Q K+ L   +  + VTG S GIG+  A+  A+ GA V ++ R+E+KL Q    I +  
Sbjct: 4   HYQPKQDLL-NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET 62
Query: 147 P-NPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLV 205
              P++          + C         + ++  I+ +Y  +   L  A           
Sbjct: 63  GRQPQWFILDLLTCTSEDC---------QQLAQRIAVNYPRLDGVLHNA----------- 102
Query: 206 NCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE 265
                 L G +  M+ QD +V                W+   V+ +N+  T  +T+AL+ 
Sbjct: 103 -----GLLGDVCPMSEQDPQV----------------WQD--VMQVNVNATFMLTQALLP 139
Query: 266 GMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ 313
            + +   G +V T+S     G     AY +SKFA +G  + L  E +Q
Sbjct: 140 LLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ 187

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 48/225 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  +G+G+  A+  A+RGA V  V  D           ++A         I  +EI+K
Sbjct: 24  VTGAGAGLGREYALLFAERGAKV--VVNDLGGTHSGDGASQRAAD-------IVVDEIRK 74
Query: 163 ACPNPKFIRFIEYVSLDISKDYENI---RSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
           A          E V+     DY ++      ++ A+   G V +LVN AG+    +L + 
Sbjct: 75  AGG--------EAVA-----DYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKT 121
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVI-DLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           + QD                      W ++ D++L G+   T+A    MK++  G I++T
Sbjct: 122 SEQD----------------------WNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMT 159
Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           +S +   G +G   YT++K  L G A  + +E  ++ +   + +P
Sbjct: 160 SSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP 204

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A E AK GA V I                     P+ I      E ++
Sbjct: 9   VTGSTSGIGLAMATELAKAGADVVI----------------NGFGQPEDI------ERER 46
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           +    KF     Y++ D+S D +  R  +  A +  G + +LVN AG+     +EE  + 
Sbjct: 47  STLESKFGVKAYYLNADLS-DAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVD 105
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W +  +I LNL    H T A +  M+++G G I+  AS  
Sbjct: 106 K-------------------WNA--IIALNLSAVFHGTAAALPIMQKQGWGRIINIASAH 144
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
             +     +AY ++K  + G  +   +E    G+T     P    TP  E +
Sbjct: 145 GLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVEKQ 196

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 44/232 (18%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A   A +GA + +                       F    E E+++ 
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVL---------------------NGFGDAAEIEKVRA 47
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  ++ + Y   D+SK  E +R  +  A+ + G + +LVN AG+     +E+   +
Sbjct: 48  GLAAQHGVKVL-YDGADLSKG-EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W +  ++ LNL    H T A +  MK++G G I+  AS  
Sbjct: 106 K-------------------WDA--ILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH 144
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
             +     +AY ++K  + GF +   +E    G+T     P    +P  E +
Sbjct: 145 GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRSPLVEKQ 196

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 92/245 (37%), Gaps = 64/245 (26%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V   S GIG+ VA   ++ GA VTI AR+E+ L ++                        
Sbjct: 24  VLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR--------------------- 62
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       YV  D+ KD       L    ++   V +LV  AG    G  +E+T +
Sbjct: 63  ------------YVVCDLRKD-------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNE 103
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D K                       ID      I + +  +  MK++G G IV   S +
Sbjct: 104 DFK---------------------EAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS 142
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE---NEEKSKP 339
               I  L    S++ AL GF + L  EV   G+T+    P  T+T   +   +EEK K 
Sbjct: 143 VISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQ 202
Query: 340 RETSL 344
            E+ +
Sbjct: 203 VESQI 207

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 49/227 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   A RGA V   A  E     AQ        N K +          
Sbjct: 10  VTGASRGIGRAIAETLAARGAKVIGTATSENG---AQAISDYLGANGKGLM--------- 57
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          L+++ D  +I S L+      G V +LVN AG+    T + + M+
Sbjct: 58  ---------------LNVT-DPASIESVLEKIRAEFGEVDILVNNAGI----TRDNLLMR 97
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M+   W               +I+ NL     ++KA++  M ++  G I+   S  
Sbjct: 98  ----MKDEEW-------------NDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVV 140
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
             +G  G A + ++K  L GF+++L  EV   G+T+ +  P   +T 
Sbjct: 141 GTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD 187

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 46/226 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A+E  + GA V   A               A    K    ++   ++ 
Sbjct: 32  VTGASRGIGQAIALELGRLGAVVIGTA-------------TSASGAEKIAETLKANGVEG 78
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A            + LD+S D E++ + L+      G   ++VN AG+    T + + ++
Sbjct: 79  AG-----------LVLDVSSD-ESVAATLEHIQQHLGQPLIVVNNAGI----TRDNLLVR 122
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M+   W             + V++ NL     ++KA++ GM +   G I+   S  
Sbjct: 123 ----MKDDEW-------------FDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVV 165
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
             +G  G   Y ++K  L+GF  AL  EV    +T+    P   DT
Sbjct: 166 GAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDT 211

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 48/200 (24%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ GIG  +A +  + GA V I  R         E+  K+   P  I+F +++    
Sbjct: 11  ITGGTLGIGLAIATKFVEEGAKVMITGRHS----DVGEKAAKSVGTPDQIQFFQHD---- 62
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                             S D +             GPV  LVN AG+A+  ++EE T  
Sbjct: 63  ------------------SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTT- 103
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                             A WR   ++ +NL G    T+  ++ MK +G G  +I  S  
Sbjct: 104 ------------------AEWRK--LLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143
Query: 283 AN-LGIYGLAAYTSSKFALK 301
              +G   L AY +SK A++
Sbjct: 144 EGFVGDPSLGAYNASKGAVR 163

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQP 230
           R  +  ++D++ D+E+     +  +   G V +L+N AG+    T  +MT  D       
Sbjct: 75  RDFKAYAVDVA-DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGD------- 126
Query: 231 LWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL 290
                       W +  V+  +L    ++TK  + GM +R  G IV   S   + G +G 
Sbjct: 127 ------------WDA--VMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ 172
Query: 291 AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQ--T 348
           A Y S+K  + GF + L +E  + G+T+    P    T   E   +    E  ++ Q   
Sbjct: 173 ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD-VLEAKILPQIPV 231
Query: 349 GGLYRPEVVKQSGLTITLCLPPDTDTPGF 377
           G L RP+ V  + L   LC    +D  GF
Sbjct: 232 GRLGRPDEV--AALIAFLC----SDDAGF 254

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRG 235
           V  DI+ D E +  A +   +  GPV +L+  AG+     L  M+ +D            
Sbjct: 64  VKCDIT-DTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDF----------- 111
Query: 236 YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTS 295
                      +V++ NL GT  + K     M +  +G +V+ +S    LG  G A Y +
Sbjct: 112 ----------TSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAA 161
Query: 296 SKFALKGFAEALYMEVKQSGLTITLCLPP--DTDTPGFENEEKSKPRETSLISQT--GGL 351
           SK  L GFA +L  E+    +T  +  P   DTD      +E+      +++SQ   G  
Sbjct: 162 SKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQ----RANIVSQVPLGRY 217
Query: 352 YRPE 355
            RPE
Sbjct: 218 ARPE 221

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 44/232 (18%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A   A +GA + +                       F    E E+++ 
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVL---------------------NGFGDAAEIEKVRA 47
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  ++ + Y   D+SK  E +R  +  A+ + G + +LVN AG+     +E+   +
Sbjct: 48  GLAAQHGVKVL-YDGADLSKG-EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W +  ++ LNL    H T A +  MK++G G I+  AS  
Sbjct: 106 K-------------------WDA--ILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH 144
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
             +     +AY ++K  + GF +   +E    G+T     P     P  E +
Sbjct: 145 GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRAPLVEKQ 196

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 45/222 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG+ ++ + A  G  + +       L Q +E+  +       I+ IE  + K 
Sbjct: 7   VTGGAQGIGRGISEKLAADGFDIAVA-----DLPQQEEQAAET------IKLIEAADQKA 55
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +V LD++ D  N  SA+  A ++ G   +LVN AG+A    L E+T +
Sbjct: 56  V-----------FVGLDVT-DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEE 103
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQ 281
           D+K                      +  +N++      +A      + G +G I+  AS 
Sbjct: 104 DLK---------------------QIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASI 142
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           AA  G   L+AY+++KFA++G  +A   E+   G T+    P
Sbjct: 143 AAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAP 184

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 45/228 (19%)
Query: 87  HLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC 146
           H Q K+ L   +  + VTG S GIG+  A+  A+ GA V ++ R+E+KL Q    I +  
Sbjct: 2   HYQPKQDLL-NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET 60
Query: 147 P-NPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLV 205
              P++          + C         + ++  I+ +Y  +   L  A           
Sbjct: 61  GRQPQWFILDLLTCTSENC---------QQLAQRIAVNYPRLDGVLHNA----------- 100
Query: 206 NCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE 265
                 L G +  M+ Q+ +V                W+   V+ +N+  T  +T+AL+ 
Sbjct: 101 -----GLLGDVCPMSEQNPQV----------------WQD--VMQVNVNATFMLTQALLP 137
Query: 266 GMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ 313
            + +   G +V T+S     G     AY +SKFA +G  + L  E +Q
Sbjct: 138 LLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ 185

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 48/200 (24%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ GIG  +A +  + GA V I  R         E+  K+   P  I+F +++    
Sbjct: 11  ITGGTLGIGLAIATKFVEEGAKVMITDRHS----DVGEKAAKSVGTPDQIQFFQHD---- 62
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                             S D +             GPV  LVN AG+A+  ++EE T  
Sbjct: 63  ------------------SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTT- 103
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                             A WR   ++ +NL G    T+  ++ MK +G G  +I  S  
Sbjct: 104 ------------------AEWRK--LLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143
Query: 283 AN-LGIYGLAAYTSSKFALK 301
              +G   L AY +SK A++
Sbjct: 144 EGFVGDPSLGAYNASKGAVR 163

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 57/273 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIGK +A+   K G  V +  AR  K    A EE+ K                 
Sbjct: 6   VTGASRGIGKAIALSLGKAGCKVLVNYARSAK----AAEEVSKQIE-------------- 47
Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                 + I F      D+SK+ + + + ++ A+D  G + ++VN AG+    T + + +
Sbjct: 48  --AYGGQAITF----GGDVSKEAD-VEAMMKTAIDAWGTIDVVVNNAGI----TRDTLLI 96
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +    M++  W               VIDLNL G    T+A  + M ++ +G I+  AS 
Sbjct: 97  R----MKKSQWDE-------------VIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV 139
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP----PDTDTPGFENEEKS 337
              +G  G A Y ++K  + GF++    E     + + +  P     D      E+ EK 
Sbjct: 140 VGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEK- 198
Query: 338 KPRETSLISQTGGLYRPEVVKQSGLTITLCLPP 370
           K   T  + +TG   +PE V  +GL   L L P
Sbjct: 199 KILGTIPLGRTG---QPENV--AGLVEFLALSP 226

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 50/226 (22%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI--VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           VTG   G+G+  A+  A+RGA V +  +  D K + +      K             EEI
Sbjct: 14  VTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV-----------EEI 62
Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSA---LQPAMDRCGPVYMLVNCAGMALCGTLE 217
           ++        R  + V+     +Y+++ +    ++ A+D  G + ++VN AG+    +  
Sbjct: 63  RR--------RGGKAVA-----NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFS 109
Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
            ++ +D  ++++                     ++L G+  +T+A  +  K++  G I+ 
Sbjct: 110 RISDEDWDIIQR---------------------VHLRGSFQVTRAAWDHXKKQNYGRIIX 148
Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           TAS +   G +G A Y+++K  L G A  L +E +++ +      P
Sbjct: 149 TASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP 194

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 50/246 (20%)
Query: 84  REPHLQMKRYLAP--TNGTLSVTGGSSGIGKHVA---IEAAKRGAHVTIVARDEKKLLQA 138
           R  H+   R  A      T+ +TG S+GIGK  A   +EA+     + + AR  +KL   
Sbjct: 17  RGSHMSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL--- 73
Query: 139 QEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC 198
            EE+KK               I +  PN K    +    LDI++  E I+  ++      
Sbjct: 74  -EELKKT--------------IDQEFPNAK----VHVAQLDITQ-AEKIKPFIENLPQEF 113
Query: 199 GPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI 257
             + +LVN AG AL    + ++  +DI+                      V D N+   I
Sbjct: 114 KDIDILVNNAGKALGSDRVGQIATEDIQ---------------------DVFDTNVTALI 152
Query: 258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
           ++T+A++   + +  G IV   S A        + Y +SKFA+  F ++L  E+  + + 
Sbjct: 153 NITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIR 212
Query: 318 ITLCLP 323
           + L  P
Sbjct: 213 VILIAP 218

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPN--PKFIRFIEYEEI 160
           +TG + G G+  A+  A  GA   I+A D    L +      A P+   + +R +E    
Sbjct: 16  ITGAARGQGRAHAVRMAAEGAD--IIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN- 72
Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                     R I    +D ++D++ +R  +   +   G + ++V  AG+A     +++T
Sbjct: 73  ----------RRIVAAVVD-TRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDIT 121
Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            +D +                      V+D+N+ GT +   A    + + GRG  +I  S
Sbjct: 122 PEDFR---------------------DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILIS 160
Query: 281 QAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
            AA + +   +  YT+SK A+ G A A   E+ +  + +    P   +TP
Sbjct: 161 SAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTP 210

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 90/232 (38%), Gaps = 52/232 (22%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTG +SGIG  +A   A+ GA++ +    +              P P       +  
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNGFGD--------------PAPALAEIARHG- 50
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
             KA  +P           D+S D   I +    A    G V +LVN AG+         
Sbjct: 51  -VKAVHHPA----------DLS-DVAQIEALFALAEREFGGVDILVNNAGI--------- 89
Query: 220 TMQDIKVMEQ-PLWLRGYHTRLALWRSWT-VIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
             Q +  +EQ PL             SW  +I LNL    H T+  + GM+ R  G I+ 
Sbjct: 90  --QHVAPVEQFPL------------ESWDKIIALNLSAVFHGTRLALPGMRARNWGRIIN 135
Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
            AS    +G  G AAY ++K  + G  + + +E   S +T     P    TP
Sbjct: 136 IASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTP 187

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG+ V+I  AK GA++ I   DE+       E K         +++E E +K 
Sbjct: 52  ITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG---DANETK---------QYVEKEGVKC 99
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D+S D ++ +  +Q  + + G + +LVN          ++   Q
Sbjct: 100 VL-----------LPGDLS-DEQHCKDIVQETVRQLGSLNILVNNVA-------QQYPQQ 140
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            ++          Y T   L +++ +   N++   H+TKA +  +KQ     I+ TAS  
Sbjct: 141 GLE----------YITAEQLEKTFRI---NIFSYFHVTKAALSHLKQGD--VIINTASIV 185
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A  G   L  Y+++K A+  F  +L   + Q G+ +    P    TP
Sbjct: 186 AYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTP 232

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 44/212 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACP-NPKFIRFIEYEEIK 161
           VTG S GIG+  A+  A+ GA V ++ R+E+KL Q    I +     P++          
Sbjct: 15  VTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTS 74
Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           + C         + ++  I  +Y  +   L  A                 L G +  M+ 
Sbjct: 75  ENC---------QQLAQRIVVNYPRLDGVLHNA----------------GLLGDVCPMSE 109
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           Q+ +V                W+   V+ +N+  T  +T+AL+  + +   G +V T+S 
Sbjct: 110 QNPQV----------------WQD--VMQINVNATFMLTQALLPLLLKSDAGSLVFTSSS 151
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQ 313
               G     AY +SKFA +G  + L  E +Q
Sbjct: 152 VGRQGRANWGAYAASKFATEGMMQVLADEYQQ 183

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 96/243 (39%), Gaps = 48/243 (19%)
Query: 91  KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPK 150
           KR  + T   + +TG   GIG+  A E AK  + + +   ++  L    EE    C    
Sbjct: 24  KRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL----EETAAKCKGL- 78
Query: 151 FIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM 210
                            K   F+    +D S + E+I S+ +      G V +LVN AG+
Sbjct: 79  ---------------GAKVHTFV----VDCS-NREDIYSSAKKVKAEIGDVSILVNNAGV 118
Query: 211 ALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR 270
                   +   D+   + P   + +   + L   WT            TKA +  M + 
Sbjct: 119 --------VYTSDLFATQDPQIEKTFEVNV-LAHFWT------------TKAFLPAMTKN 157
Query: 271 GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT--ITLCLPPDTDT 328
             G IV  AS A ++ +  L AY SSKFA  GF + L  E+    +T   T CL P+   
Sbjct: 158 NHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVN 217
Query: 329 PGF 331
            GF
Sbjct: 218 TGF 220

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 90/230 (39%), Gaps = 48/230 (20%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTGGS GIG  +A   A  GA V +   +  +  QA                    E
Sbjct: 33  TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV-----------------VSE 75
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
           I++A      IR         ++D E I  A++  ++  G + +LVN AG+     LEE 
Sbjct: 76  IEQAGGRAVAIRAD-------NRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET 128
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           T+ D                        V  +N        ++    +   GR  I+   
Sbjct: 129 TVADFD---------------------EVXAVNFRAPFVAIRSASRHLGDGGR--IITIG 165
Query: 280 SQAANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           S  A L  + G++ Y++SK AL G  + L  ++   G+T+ +  P  TDT
Sbjct: 166 SNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDT 215

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG+ V+I  AK GA++ I   DE+       E K         +++E E +K 
Sbjct: 52  ITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG---DANETK---------QYVEKEGVKC 99
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D+S D ++ +  +Q  + + G + +LVN          ++   Q
Sbjct: 100 VL-----------LPGDLS-DEQHCKDIVQETVRQLGSLNILVNNVA-------QQYPQQ 140
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            ++          Y T   L +++ +   N++   H+TKA +  +KQ     I+ TAS  
Sbjct: 141 GLE----------YITAEQLEKTFRI---NIFSYFHVTKAALSHLKQGD--VIINTASIV 185
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A  G   L  Y+++K A+  F  +L   + Q G+ +    P    TP
Sbjct: 186 AYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTP 232

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 38/235 (16%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNP--KFIRFIEYEEI 160
           +TG + G G+  A+  A  GA   I+A D    + A      A P    +  R +E ++ 
Sbjct: 20  ITGAARGQGRSHAVRLAAEGAD--IIACDICAPVSASVTYAPASPEDLDETARLVE-DQG 76
Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
           +KA       R ++       +D   +R  +   M++ G + ++V  AG+   G + E+T
Sbjct: 77  RKA-----LTRVLDV------RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELT 125
Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            +                    W   TVI +NL GT    +A V  M + G G  ++  S
Sbjct: 126 DEQ-------------------WD--TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVS 164
Query: 281 QAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
            +A L    G   Y++SK  L      L +E+ + G+ +    P   +TP  E E
Sbjct: 165 SSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE 219

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLR 234
           YV  D++++ E++R A+  A +   P++ +V+ AG+ L               E+ L   
Sbjct: 43  YVEGDVTRE-EDVRRAVARAQEEA-PLFAVVSAAGVGLA--------------EKILGKE 86
Query: 235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIY 288
           G H   +  R   V+++NL GT ++ +     M++        RG IV TAS AA  G  
Sbjct: 87  GPHGLESFRR---VLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI 143
Query: 289 GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN-EEKSKPRETSLISQ 347
           G AAY +SK  +         E+   G+ +    P   DTP  +   EK+K    + +  
Sbjct: 144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF 203
Query: 348 TGGLYRPE 355
              L RPE
Sbjct: 204 PPRLGRPE 211

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 112/300 (37%), Gaps = 53/300 (17%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SGIG+ V++  A  GA V     D      AQE           +R +     K+
Sbjct: 12  VTGAGSGIGRAVSVRLAGEGATVAACDLDRAA---AQET----------VRLLGGPGSKE 58
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
             P      F   VS   ++    +   +Q    R  P  ++V+CAG+    T +E  + 
Sbjct: 59  GPPRGNHAAFQADVSE--ARAARCLLEQVQACFSR--PPSVVVSCAGI----TQDEFLLH 110
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQ 281
               M +  W +             VI +NL GT  +T+A  + +   G RG I+  +S 
Sbjct: 111 ----MSEDDWDK-------------VIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSI 153
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
              +G  G   Y +SK  + G  +    E+ + G+     LP    TP  +   +    +
Sbjct: 154 VGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDK 213
Query: 342 TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPE 401
            + +   G L  PE V               D   F   E S     + +  TGGL+  E
Sbjct: 214 ITEMIPMGHLGDPEDV--------------ADVVAFLASEDSGYITGTSVEVTGGLFMAE 259

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 85/223 (38%), Gaps = 52/223 (23%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG++GIG+ +A   A  GA + I                   P P         E + 
Sbjct: 12  ITGGANGIGRAIAERFAVEGADIAIA---------------DLVPAP---------EAEA 47
Query: 163 ACPNPKFIRFIEYVSLDISK--DYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
           A  N    R +  V  D+S+  D E     +     RC    +LVN AG+      +E+T
Sbjct: 48  AIRN--LGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD---ILVNNAGIYPLIPFDELT 102
Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            +                    W+     ++N+     M KA V GMK+ G G I+   S
Sbjct: 103 FEQ-------------------WKK--TFEINVDSGFLMAKAFVPGMKRNGWGRIINLTS 141
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
               L I     Y S+K A  GF  AL  ++ + G+T+    P
Sbjct: 142 TTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAP 184

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 89/237 (37%), Gaps = 53/237 (22%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIGK +A   A+RGA V   A  E     AQ        N K            
Sbjct: 14  VTGASRGIGKAIAELLAERGAKVIGTATSESG---AQAISDYLGDNGKGXAL-------- 62
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              NP                 E+I + L+   D  G V +LVN AG+     L     +
Sbjct: 63  NVTNP-----------------ESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEE 105
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVI-DLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                      W+ I + NL     ++KA++ G  ++ +G I+   S 
Sbjct: 106 E----------------------WSDIXETNLTSIFRLSKAVLRGXXKKRQGRIINVGSV 143
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP--DTDTPGFENEEK 336
               G  G A Y ++K  + GF ++   EV   G+T+    P   +TD     N+E+
Sbjct: 144 VGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVAPGFIETDXTKALNDEQ 200

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 52/226 (23%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+ +A   ++ G  + ++AR  ++L        KA   P  +          
Sbjct: 21  ITGASSGIGEAIARRFSEEGHPLLLLARRVERL--------KALNLPNTL---------- 62
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            C             +D++  Y    +A+  A    GP   +VN AGM L G        
Sbjct: 63  -C-----------AQVDVTDKY-TFDTAITRAEKIYGPADAIVNNAGMMLLG-------- 101
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            I   E   W R +             D+N+ G ++  +A++  MK R  G I+  +S A
Sbjct: 102 QIDTQEANEWQRMF-------------DVNVLGLLNGMQAVLAPMKARNCGTIINISSIA 148
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
                   AAY  +KFA+   +E +  EV  S + +    P    T
Sbjct: 149 GKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKT 194

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 59/272 (21%)
Query: 93  YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFI 152
           Y +  N  + VTG  SGIG+ +A + A   + V  V   E +L Q  +E++        +
Sbjct: 2   YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGV 61
Query: 153 RFIEYEEIKKACPNPKFIR--FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM 210
           +     ++ K     +F+R  F  Y  +D+  +   I   + P  +              
Sbjct: 62  K----ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAE-------------- 103
Query: 211 ALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR 270
                           +   LW R             V+ +NLY   + ++A++  M ++
Sbjct: 104 ----------------VSDELWER-------------VLAVNLYSAFYSSRAVIPIMLKQ 134
Query: 271 GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP- 329
           G+G IV TAS A   G +  A YT +K  L G   ++       G+     LP    T  
Sbjct: 135 GKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI 194
Query: 330 GFENEEKSKPRE------TSLISQTGGLYRPE 355
           G  +   SKP E      T L+S +  L  PE
Sbjct: 195 GLGS---SKPSELGMRTLTKLMSLSSRLAEPE 223

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 44/241 (18%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  +TG +SGIG  +A   AK GA++ +          A +EI+              +E
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVL------NGFGAPDEIRTVT-----------DE 69
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
           +            + +   D +K  E I        DR G   +LVN AG+     +E+ 
Sbjct: 70  VAGLSSGT-----VLHHPADXTKPSE-IADXXAXVADRFGGADILVNNAGVQFVEKIEDF 123
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
            ++         W R             +I +NL  + H  +  +   K++G G I+  A
Sbjct: 124 PVEQ--------WDR-------------IIAVNLSSSFHTIRGAIPPXKKKGWGRIINIA 162
Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
           S    +     +AY ++K  + G  + + +EV +SG+T+    P    TP  E +   + 
Sbjct: 163 SAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQA 222
Query: 340 R 340
           R
Sbjct: 223 R 223

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 50/222 (22%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + G+G+ +A     +GA V +    E+KL +   E+ +                  
Sbjct: 15  VTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGE------------------ 56
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                +   F   +S     D E +++  Q A +  G V +LVN AG+   G    M+ +
Sbjct: 57  -----RIFVFPANLS-----DREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDE 106
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W +  V+ +NL    ++T+ L   M +R  G I+   S  
Sbjct: 107 D-------------------WDA--VLTVNLTSVFNLTRELTHPMMRRRNGRIINITSIV 145
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP 324
              G  G A Y +SK  L GF+++L  E+    +T+  C+ P
Sbjct: 146 GVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVN-CIAP 186

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 45/224 (20%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTG S G+GK +A +    GA++ +        L A  E  KA         I    
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-------INVVV 59
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
            K    NP                 E++ + ++ AMD  G + +LVN AG+     + +M
Sbjct: 60  AKGDVKNP-----------------EDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKM 102
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           + +D                   W    V++ NL      TKA+ + M ++  G I+   
Sbjct: 103 SEKD-------------------WDD--VLNTNLKSAYLCTKAVSKIMLKQKSGKIINIT 141
Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           S A  +G  G A Y +SK  L GF +++  E    G+      P
Sbjct: 142 SIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAP 185

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 50/222 (22%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + G+G+ +A     +GA V +    E+KL +   E+ +                  
Sbjct: 12  VTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGE------------------ 53
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                +   F   +S     D E +++  Q A +  G V +LVN AG+   G    M+ +
Sbjct: 54  -----RIFVFPANLS-----DREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDE 103
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W +  V+ +NL    ++T+ L   M +R  G I+   S  
Sbjct: 104 D-------------------WDA--VLTVNLTSVFNLTRELTHPMMRRRNGRIINITSIV 142
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP 324
              G  G A Y +SK  L GF+++L  E+    +T+  C+ P
Sbjct: 143 GVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVN-CIAP 183

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 95/240 (39%), Gaps = 50/240 (20%)
Query: 92  RYLAPTNGTLSV-TGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPK 150
           ++++  +G ++V TG S GIG  +A +    GA V + ARD +KL   + EI  A     
Sbjct: 22  KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG--- 78
Query: 151 FIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM 210
                  E    AC             L  S       + +  A  RC    +LVN AG+
Sbjct: 79  -------EAESHAC------------DLSHSDAIAAFATGVLAAHGRCD---VLVNNAGV 116
Query: 211 ALCGTLEEMTMQDIKVMEQPLWLRG-YHT-RLALWRSWTVIDLNLYGTIHMTKALVEGMK 268
                                W  G  HT + A W +  +I +NL     + +A    M 
Sbjct: 117 G--------------------WFGGPLHTMKPAEWDA--LIAVNLKAPYLLLRAFAPAMI 154
Query: 269 QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
              RG I+  +S A    +   AAYT+SK+ L G   +   E++Q  + ++L  P    T
Sbjct: 155 AAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRT 214

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 19/123 (15%)
Query: 248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
           V+ +NL G+  + +   E +++ G   +V+T S  A LG +GLA Y + K  + G A  L
Sbjct: 107 VLRVNLTGSFLVARKAGEVLEEGG--SLVLTGS-VAGLGAFGLAHYAAGKLGVVGLARTL 163
Query: 308 YMEVKQSGLTITLCLPPDTDTP--------GFENEEKSKPRETSLISQTGGLYRPEVVKQ 359
            +E+ + G+ + + LP    TP         +E E  + P     + + G   RPE V Q
Sbjct: 164 ALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASP-----LGRAG---RPEEVAQ 215
Query: 360 SGL 362
           + L
Sbjct: 216 AAL 218

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 50/222 (22%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG  +A    K GA V I   D    + A + +     N  F           
Sbjct: 17  VTGGSKGIGAAIARALDKAGATVAIADLD----VMAAQAVVAGLENGGF----------- 61
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D++K   ++ +A+Q A+D  G   +L   AG++        TM+
Sbjct: 62  ------------AVEVDVTK-RASVDAAMQKAIDALGGFDLLCANAGVS--------TMR 100
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTK-ALVEGMKQRGRGCIVITASQ 281
               +    W   +             D+N  G     + A    +    +G IV TAS 
Sbjct: 101 PAVDITDEEWDFNF-------------DVNARGVFLANQIACRHFLASNTKGVIVNTASL 147
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           AA +G   LA Y++SKFA+ G+ +AL  E+    + +    P
Sbjct: 148 AAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCP 189

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 240 LALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFA 299
           +A W +   +DLN+     +++ L+  ++    GC++   S A N    G   Y +SK A
Sbjct: 96  VAEWHAH--LDLNVIVPAELSRQLLPALRA-ASGCVIYINSGAGNGPHPGNTIYAASKHA 152
Query: 300 LKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEV 356
           L+G A+A   E   +G+ ++   P  T+TP  +           L+   G  +RPE+
Sbjct: 153 LRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ----------GLMDSQGTNFRPEI 199

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLR 234
           +   D++ + +++++AL  A  + G V + VNCAG+A+      +       +E   + R
Sbjct: 60  FAPADVTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQR 116
Query: 235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIY 288
                        V+D+NL GT ++ + +   M Q        RG I+ TAS AA  G  
Sbjct: 117 -------------VLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV 163
Query: 289 GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           G AAY++SK  + G    +  ++   G+ +    P    TP
Sbjct: 164 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 204

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 23/150 (15%)
Query: 187 IRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS 245
           +++AL  A ++ G + + VNCAG+A+   T  E   Q              HT     R 
Sbjct: 70  VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQ-------------VHTLEDFQR- 115
Query: 246 WTVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFA 299
             VI++NL GT ++ + +   M Q        RG I+ TAS AA  G  G AAY++SK  
Sbjct: 116 --VINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 173
Query: 300 LKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           + G    +  ++   G+ +    P    TP
Sbjct: 174 IVGMTLPIARDLAPIGIRVVTIAPGLFATP 203

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 48/256 (18%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           ++G + G G+  A+  A+ GA   I+A D    ++       A P+       E  ++ K
Sbjct: 20  ISGAARGQGRSHAVRLAQEGA--DIIAIDICGPIE-----NLAYPHSTPEDLAETADLVK 72
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                   R I    +D+ +D+E ++SA+   +++ G + ++V  AG+   G        
Sbjct: 73  -----DLDRRIVTAQVDV-RDFEALKSAVDSGVEQLGRLDIIVANAGVGTDG-------- 118
Query: 223 DIKVMEQPLWLRGYH-TRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITAS 280
                      R  H  R  +W+   +ID+NL G  H  KA V  +   GR G IV+T+S
Sbjct: 119 -----------RKLHKIRDNVWQD--MIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSS 165
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR 340
                       Y ++K  + G   A  +E+    + +   LP    T    N+      
Sbjct: 166 VGGRKAYPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMND------ 219
Query: 341 ETSLISQTGGLYRPEV 356
                 QT  L+RP++
Sbjct: 220 ------QTFRLFRPDL 229

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 23/150 (15%)
Query: 187 IRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS 245
           +++AL  A ++ G + + VNCAG+A+   T  E   Q              HT     R 
Sbjct: 71  VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQ-------------VHTLEDFQR- 116
Query: 246 WTVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFA 299
             VI++NL GT ++ + +   M Q        RG I+ TAS AA  G  G AAY++SK  
Sbjct: 117 --VINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
Query: 300 LKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           + G    +  ++   G+ +    P    TP
Sbjct: 175 IVGMTLPIARDLAPIGIRVVTIAPGLFATP 204

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 23/150 (15%)
Query: 187 IRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS 245
           +++AL  A ++ G + + VNCAG+A+   T  E   Q              HT     R 
Sbjct: 71  VQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQ-------------VHTLEDFQR- 116
Query: 246 WTVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFA 299
             VI++NL GT ++ + +   M Q        RG I+ TAS AA  G  G AAY++SK  
Sbjct: 117 --VINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGG 174
Query: 300 LKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           + G    +  ++   G+ +    P    TP
Sbjct: 175 IVGMTLPIARDLAPIGIRVVTIAPGLFATP 204

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 58/227 (25%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   A RGA V   A  E     AQ        N K +          
Sbjct: 10  VTGASRGIGRAIAETLAARGAKVIGTATSENG---AQAISDYLGANGKGLM--------- 57
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          L+++ D  +I S L+      G V +LVN AG+    T + + M+
Sbjct: 58  ---------------LNVT-DPASIESVLEKIRAEFGEVDILVNNAGI----TRDNLLMR 97
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               M+   W               +I+ NL     ++KA++  M ++  G I+      
Sbjct: 98  ----MKDEEW-------------NDIIETNLSSVFRLSKAVMRAMMKKRHGRIIT----- 135
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
               I G A Y ++K  L GF+++L  EV   G+T+ +  P   +T 
Sbjct: 136 ----IGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETS 178

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLR 234
           +   D++ + +++++AL  A  + G V + VNCAG+A+      +       +E   + R
Sbjct: 62  FAPADVTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQR 118
Query: 235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIY 288
                        V+D+NL GT ++ + +   M Q        RG I+ TAS AA  G  
Sbjct: 119 -------------VLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV 165
Query: 289 GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           G AAY++SK  + G    +  ++   G+ +    P    TP
Sbjct: 166 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 206

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 55/210 (26%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+         GA V  V+R +  L                      + + +
Sbjct: 12  VTGAGKGIGRGTVQALHATGARVVAVSRTQADL----------------------DSLVR 49
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            CP       IE V +D+  D+E    A + A+   GPV +LVN A +AL     E+T +
Sbjct: 50  ECPG------IEPVCVDLG-DWE----ATERALGSVGPVDLLVNNAAVALLQPFLEVTKE 98
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                             A  RS+   ++NL   I +++ +  G+  RG  G IV  +SQ
Sbjct: 99  ------------------AFDRSF---EVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEV 311
            +   +   + Y S+K AL    + + +E+
Sbjct: 138 XSQRAVTNHSVYCSTKGALDMLTKVMALEL 167

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLR 234
           +   D++ + +++++AL  A  + G V + VNCAG+A+      +       +E   + R
Sbjct: 60  FAPADVTSE-KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQR 116
Query: 235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIY 288
                        V+D+NL GT ++ + +   M Q        RG I+ TAS AA  G  
Sbjct: 117 -------------VLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV 163
Query: 289 GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           G AAY++SK  + G    +  ++   G+ +    P    TP
Sbjct: 164 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 204

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 48/236 (20%)
Query: 90  MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNP 149
           M R     N    VT  + GIG  +A   A+ GAHV + +R ++ + QA   ++      
Sbjct: 7   MTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEG--- 63
Query: 150 KFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLV-NCA 208
                         C   K            ++D E +   +  A+   G + +LV N A
Sbjct: 64  -------LSVTGTVCHVGK------------AEDRERL---VATAVKLHGGIDILVSNAA 101
Query: 209 GMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMK 268
                G++ ++T        + +W +              +D+N+     MTKA+V  M+
Sbjct: 102 VNPFFGSIMDVT--------EEVWDK-------------TLDINVKAPALMTKAVVPEME 140
Query: 269 QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP 324
           +RG G +VI +S AA     G + Y  SK AL G  + L +E+    + +  CL P
Sbjct: 141 KRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVN-CLAP 195

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 55/210 (26%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+         GA V  V+R +  L                      + + +
Sbjct: 12  VTGAGKGIGRGTVQALHATGARVVAVSRTQADL----------------------DSLVR 49
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            CP       IE V +D+  D+E    A + A+   GPV +LVN A +AL     E+T +
Sbjct: 50  ECPG------IEPVCVDLG-DWE----ATERALGSVGPVDLLVNNAAVALLQPFLEVTKE 98
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                             A  RS+   ++NL   I +++ +  G+  RG  G IV  +SQ
Sbjct: 99  ------------------AFDRSF---EVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEV 311
            +   +   + Y S+K AL    + + +E+
Sbjct: 138 CSQRAVTNHSVYCSTKGALDMLTKVMALEL 167

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 63/232 (27%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFI--EY 157
           T+ +TG S GIGK +A++AAK GA++ I A             K A P+PK +  I    
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAA-------------KTAQPHPKLLGTIYTAA 93
Query: 158 EEIK----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA-GMAL 212
           EEI+    KA P            +D+ +D + I +A++ A+ + G + +LVN A  ++L
Sbjct: 94  EEIEAVGGKALP----------CIVDV-RDEQQISAAVEKAIKKFGGIDILVNNASAISL 142
Query: 213 CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR 272
             TL+  T                  RL L     ++++N  GT   +KA +  +K + +
Sbjct: 143 TNTLDTPT-----------------KRLDL-----MMNVNTRGTYLASKACIPYLK-KSK 179
Query: 273 GCIVITASQAANLG--------IYGLAAYTSSKFALKGFAEALYMEVKQSGL 316
              ++  S   NL          Y +A Y  S + L G AE    E+  + L
Sbjct: 180 VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL-GMAEEFKGEIAVNAL 230

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 45/247 (18%)
Query: 83  SREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI 142
           S   H Q K+ L   N  + VTG S GIG+  A+  A+ GA V ++ R+E+KL +  + I
Sbjct: 1   SNAXHYQPKQDLL-QNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHI 59
Query: 143 -KKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPV 201
             +    P++          + C           V+  I+  Y  +   L  A       
Sbjct: 60  ADEQHVQPQWFTLDLLTCTAEEC---------RQVADRIAAHYPRLDGVLHNA------- 103
Query: 202 YMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTK 261
                     L G +   + QD ++ +                   V  +N+  T  +T+
Sbjct: 104 ---------GLLGEIGPXSEQDPQIWQD------------------VXQVNVNATFXLTQ 136
Query: 262 ALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC 321
           AL+  + +   G +V T+S     G     AY +SKFA +G  + L  E +   L +   
Sbjct: 137 ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSLRVNCI 196
Query: 322 LPPDTDT 328
            P  T T
Sbjct: 197 NPGGTRT 203

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 21/125 (16%)
Query: 204 LVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKAL 263
           LVN AG+   G  ++++ +D        W + +              +N+ G  ++ +  
Sbjct: 78  LVNAAGILRMGATDQLSKED--------WQQTFA-------------VNVGGAFNLFQQT 116
Query: 264 VEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           +   +++  G IV  AS AA+    G++AY +SK ALK  A ++ +E+  SG+   +  P
Sbjct: 117 MNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSP 176
Query: 324 PDTDT 328
             TDT
Sbjct: 177 GSTDT 181

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 86/231 (37%), Gaps = 46/231 (19%)
Query: 93  YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFI 152
           Y    N    VTG   GIG+ +A   AK  +HV  ++R +K      +EIK         
Sbjct: 39  YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-------- 90
Query: 153 RFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL 212
               YE    A               D+SK  E I   +   +     V +LVN AG   
Sbjct: 91  --FGYESSGYAG--------------DVSKK-EEISEVINKILTEHKNVDILVNNAG--- 130
Query: 213 CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR 272
                        +    L+LR  +     W    V+  NL    ++T+ + + M     
Sbjct: 131 -------------ITRDNLFLRMKNDE---WED--VLRTNLNSLFYITQPISKRMINNRY 172
Query: 273 GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           G I+  +S     G  G A Y+SSK  + GF ++L  E+    +T+    P
Sbjct: 173 GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAP 223

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 83/214 (38%), Gaps = 56/214 (26%)
Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           T+    VTGGSSGIG  V     + GA V  V+ DEK  +   +  K    N + ++   
Sbjct: 13  TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAV 72
Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
            +  KK            Y  +DI                       LVN AG      +
Sbjct: 73  EKTTKK------------YGRIDI-----------------------LVNNAG------I 91
Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           E+ +         PL L    T   +WR   +ID+N+ G+  M K  +  M   G G I+
Sbjct: 92  EQYS---------PLHL----TPTEIWRR--IIDVNVNGSYLMAKYTIPVMLAIGHGSII 136
Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYME 310
             AS  +       AAY +SK AL G   ++ ++
Sbjct: 137 NIASVQSYAATKNAAAYVTSKHALLGLTRSVAID 170

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 83/210 (39%), Gaps = 55/210 (26%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+         GA V  V R    L+                       + K
Sbjct: 12  VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS----------------------LAK 49
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
            CP       IE V +D+  D++    A + A+   GPV +LVN A +            
Sbjct: 50  ECPG------IEPVCVDLG-DWD----ATEKALGGIGPVDLLVNNAAL------------ 86
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
              V+ QP       T+ A  RS++V   NL     +++ +   M  RG  G IV  +S 
Sbjct: 87  ---VIMQPFL---EVTKEAFDRSFSV---NLRSVFQVSQMVARDMINRGVPGSIVNVSSM 137
Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEV 311
            A++    L  Y+S+K A+    +A+ ME+
Sbjct: 138 VAHVTFPNLITYSSTKGAMTMLTKAMAMEL 167

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 118/302 (39%), Gaps = 71/302 (23%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A++ A+ G +V +  A  ++K     EEIK         + ++   I+
Sbjct: 15  VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA--------KGVDSFAIQ 66
Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                                D + +++ ++  + + G + +LVN AG+     L  M  
Sbjct: 67  ANVA-----------------DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKE 109
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH-MTKALVEGMKQRGRGCIVITAS 280
           Q+                   W    VID NL G  + + KA  + ++QR  G I+  +S
Sbjct: 110 QE-------------------WDD--VIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSS 147
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR 340
               +G  G A Y ++K  + G  ++   E+   G+T+          PGF         
Sbjct: 148 VVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV------APGF--------- 192
Query: 341 ETSLISQTGGLYRPEVVKQSGLTITLC-LPPDTD---TPGFENEEKSKPRETSLISQTGG 396
              ++S        E+ +Q    I L     DTD   T  F   +K+K      I   GG
Sbjct: 193 ---IVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 249
Query: 397 LY 398
           +Y
Sbjct: 250 MY 251

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/241 (20%), Positives = 92/241 (38%), Gaps = 45/241 (18%)
Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           T+  + +TGG SG+G+  A+  A  GA +++V    + L  ++  + +  P+ + +  + 
Sbjct: 12  TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 71
Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGT 215
                                 D+S D   + + +    +R G +    N AG+      
Sbjct: 72  ----------------------DVS-DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP 108
Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
            E  T  +                        V+ +NL G     + +++ M+++G G +
Sbjct: 109 TESFTAAEFD---------------------KVVSINLRGVFLGLEKVLKIMREQGSGMV 147
Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE 335
           V TAS     GI   + Y ++K  + G      +E  + G+ I    P    TP  EN  
Sbjct: 148 VNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM 207
Query: 336 K 336
           K
Sbjct: 208 K 208

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 105/278 (37%), Gaps = 84/278 (30%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   +K GAHV         +L A+ E                     
Sbjct: 14  VTGASKGIGREMAYHLSKMGAHV---------VLTARSE--------------------- 43
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                                       LQ  + RC     L   +   + GT+E+MT  
Sbjct: 44  --------------------------EGLQKVVSRC---LELGAASAHYIAGTMEDMTFA 74
Query: 223 DIKVMEQPLWLRGY---------HTRLALWRSWT-----VIDLNLYGTIHMTKALVEGMK 268
           +  +++    + G           T L+L+         V+++N    + M+ A +  +K
Sbjct: 75  EQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLK 134
Query: 269 QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDT 326
           Q   G I + +S A  +    +A Y++SKFAL GF   +  E  + +  ++ITLC+    
Sbjct: 135 Q-SNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLI 193
Query: 327 DT-------PGFENEEKSKPRETSL-ISQTGGLYRPEV 356
           DT        G  N + S   E +L I +   L + EV
Sbjct: 194 DTETAMKAVSGIVNAQASPKEECALEIIKGTALRKSEV 231

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 105/278 (37%), Gaps = 84/278 (30%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   +K GAHV         +L A+ E                     
Sbjct: 23  VTGASKGIGREMAYHLSKMGAHV---------VLTARSE--------------------- 52
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                                       LQ  + RC     L   +   + GT+E+MT  
Sbjct: 53  --------------------------EGLQKVVSRC---LELGAASAHYIAGTMEDMTFA 83
Query: 223 DIKVMEQPLWLRGY---------HTRLALWRSWT-----VIDLNLYGTIHMTKALVEGMK 268
           +  +++    + G           T L+L+         V+++N    + M+ A +  +K
Sbjct: 84  EQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLK 143
Query: 269 QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDT 326
           Q   G I + +S A  +    +A Y++SKFAL GF   +  E  + +  ++ITLC+    
Sbjct: 144 Q-SNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLI 202
Query: 327 DT-------PGFENEEKSKPRETSL-ISQTGGLYRPEV 356
           DT        G  N + S   E +L I +   L + EV
Sbjct: 203 DTETAMKEISGIINAQASPKEECALEIIKGTALRKSEV 240

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 44/243 (18%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A + A  G ++ +     +    AQE +     N    R + ++   +
Sbjct: 31  VTGASKGIGRAIARQLAADGFNIGV--HYHRDAAGAQETLNAIVANGGNGRLLSFDVANR 88
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                                 E  R  L+  + + G  Y +V+ AG+A       ++  
Sbjct: 89  ----------------------EQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSND 126
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        W    HT L           + Y  I      + G +Q GR  I+  +S +
Sbjct: 127 D--------WDAVIHTNLD----------SFYNVIQPCIMPMIGARQGGR--IITLSSVS 166
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
             +G  G   Y+++K  + G  +AL +E+ +  +T+    P   DT   E EE +     
Sbjct: 167 GVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAM 226
Query: 343 SLI 345
           S+I
Sbjct: 227 SMI 229

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 49/223 (21%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A++ A+ G +V +  A  ++K     EEIK         + ++   I+
Sbjct: 9   VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA--------KGVDSFAIQ 60
Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                                D + +++ ++  + + G + +LVN AG+     L     
Sbjct: 61  ANVA-----------------DADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKE 103
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH-MTKALVEGMKQRGRGCIVITAS 280
           Q+                   W    VID NL G  + + KA  + ++QR  G I+  +S
Sbjct: 104 QE-------------------WDD--VIDTNLKGVFNCIQKATPQXLRQR-SGAIINLSS 141
Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
               +G  G A Y ++K  + G  ++   E+   G+T+    P
Sbjct: 142 VVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAP 184

>pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain DehydrogenaseREDUCTASE Family Oxidoreductase From Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966 Length = 235

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 50/241 (20%)
Query: 99  GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYE 158
           G + VTG  SG+G+ + I   +RG  V+   R                      R+   +
Sbjct: 4   GHIIVTGAGSGLGRALTIGLVERGHQVSXXGR----------------------RYQRLQ 41
Query: 159 EIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE 218
           + +    N      +  +  D++  +E++  A   A++  G   ++++CAG    G +  
Sbjct: 42  QQELLLGNA-----VIGIVADLAH-HEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGV 95
Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
            T + I+                      V + NL  TI + +  V  + +RG G +   
Sbjct: 96  YTAEQIR---------------------RVXESNLVSTILVAQQTVRLIGERG-GVLANV 133
Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK 338
            S AA +G    + Y +SK+  +GF E+L  E+K S L +    P    +  ++N +   
Sbjct: 134 LSSAAQVGKANESLYCASKWGXRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVD 193
Query: 339 P 339
           P
Sbjct: 194 P 194

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 58/227 (25%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A                E+ + +  + I  +  +P   +   Y+ I+ 
Sbjct: 13  VTGASMGIGRAIA----------------ERFVDEGSKVIDLSIHDPGEAK---YDHIEC 53
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              NP                 + +++++       G + +LVN AG+   G +E M+M 
Sbjct: 54  DVTNP-----------------DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMG 96
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   +ID+NL+G  + +K  +  M +     IV  +S  
Sbjct: 97  E-------------------WRR--IIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQ 135
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A++     +AY +SK A+ G  +++ ++         +C P   DTP
Sbjct: 136 ASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVC-PATIDTP 181

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 106/273 (38%), Gaps = 63/273 (23%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG+ +A   A+ G  + + AR   +L +   E+ +      F           
Sbjct: 7   ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVF----------- 55
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y  LD+SK  E++    +  ++R G V ++V  AG+            
Sbjct: 56  ------------YHHLDVSKA-ESVEEFSKKVLERFGDVDVVVANAGL------------ 90
Query: 223 DIKVMEQPLWLRGYHTRL---ALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
                       GY  RL   +      +I++NL G     KA ++ +K+ G   +V T+
Sbjct: 91  ------------GYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTS 138
Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
             +A L  YG   Y S+K+A +        +++   +      P   DT  F   +  KP
Sbjct: 139 DVSARLIPYG-GGYVSTKWAARALVRTF--QIENPDVRFFELRPGAVDTY-FGGSKPGKP 194
Query: 340 RETSLISQTGGLYRPEVVKQSGLTITLCLPPDT 372
           +E        G  +P+ + ++ +   L LP D 
Sbjct: 195 KEK-------GYLKPDEIAEA-VRCLLKLPKDV 219

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL 307
           ++ +N+  T+ MTKA+V  M++RG G ++I +S  A      L  Y  SK AL G  + L
Sbjct: 119 ILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNL 178
Query: 308 YMEVKQSGLTITLCLPP 324
            +E+    + +  CL P
Sbjct: 179 AVELAPRNIRVN-CLAP 194

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 58/227 (25%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A                E+ + +  + I  +  +P   +   Y+ I+ 
Sbjct: 20  VTGASMGIGRAIA----------------ERFVDEGSKVIDLSIHDPGEAK---YDHIEC 60
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              NP                 + +++++       G + +LVN AG+   G +E M+M 
Sbjct: 61  DVTNP-----------------DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMG 103
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   +ID+NL+G  + +K  +  M +     IV  +S  
Sbjct: 104 E-------------------WRR--IIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQ 142
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A++     +AY +SK A+ G  +++ ++         +C P   DTP
Sbjct: 143 ASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVC-PATIDTP 188

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 106/273 (38%), Gaps = 63/273 (23%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG+ +A   A+ G  + + AR   +L +   E+ +      F           
Sbjct: 29  ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVF----------- 77
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y  LD+SK  E++    +  ++R G V ++V  AG+            
Sbjct: 78  ------------YHHLDVSKA-ESVEEFSKKVLERFGDVDVVVANAGL------------ 112
Query: 223 DIKVMEQPLWLRGYHTRL---ALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
                       GY  RL   +      +I++NL G     KA ++ +K+ G   +V T+
Sbjct: 113 ------------GYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTS 160
Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
             +A L  YG   Y S+K+A +        +++   +      P   DT  F   +  KP
Sbjct: 161 DVSARLIPYG-GGYVSTKWAARALVRTF--QIENPDVRFFELRPGAVDTY-FGGSKPGKP 216
Query: 340 RETSLISQTGGLYRPEVVKQSGLTITLCLPPDT 372
           +E        G  +P+ + ++ +   L LP D 
Sbjct: 217 KEK-------GYLKPDEIAEA-VRCLLKLPKDV 241

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 243 WRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQAANLGIYGLAAYTSSKFALK 301
           WR   +ID+NL GT  +T+A  + M+  G+ G ++  AS     G   +AAY ++K  + 
Sbjct: 104 WRK--IIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVI 161
Query: 302 GFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
           GF  AL  E+ +  +T     P   ++ G +
Sbjct: 162 GFTRALATELGKYNITANAVTPGLIESDGVK 192

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLR 234
           + + D++ D   + SAL  A +  G + ++VNCAG          T   I+V+      R
Sbjct: 56  FAAADVT-DEAAVASALDLA-ETMGTLRIVVNCAG----------TGNAIRVLS-----R 98
Query: 235 GYHTRLALWRSWTVIDLNLYGTIHMTKALVE--------GMKQRGRGCIVITASQAANLG 286
                LA +R   ++D+NL G+ ++ +   E        G     RG I+ TAS AA  G
Sbjct: 99  DGVFSLAAFRK--IVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG 156
Query: 287 IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
             G AAY++SK  + G    +  ++    + +    P   DTP
Sbjct: 157 QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTP 199

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 30/158 (18%)
Query: 182 KDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLA 241
           +D E++ +ALQ  +D  G + ++V  AG+A       M+  D           G+H    
Sbjct: 84  RDRESLSAALQAGLDELGRLDIVVANAGIA------PMSAGD----------DGWHD--- 124
Query: 242 LWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLA-----AYTSS 296
                 VID+NL G  H  K  +  + ++G G  ++  S +A L   G A      Y ++
Sbjct: 125 ------VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAA 178
Query: 297 KFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
           K  + G        +    + +    P   +TP   NE
Sbjct: 179 KHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE 216

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 46/231 (19%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S+GIG+  A+  AK GA VTI  R+E +L + +++I KA                 
Sbjct: 31  ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA----------------- 73
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTM 221
             P  K    +  V+    +D       +   + + G + +LVN AG  L  GT      
Sbjct: 74  GVPAEKINAVVADVTEASGQD-----DIINTTLAKFGKIDILVNNAGANLADGTAN---- 124
Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                 +QP+ L                 LN    I MT+   E + +  +G IV  +S 
Sbjct: 125 -----TDQPVELY-----------QKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSI 167
Query: 282 AANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
            A    + G   Y  +K AL  +     +++ Q G+ +   + P     GF
Sbjct: 168 VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVN-SVSPGAVATGF 217

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 84/225 (37%), Gaps = 48/225 (21%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTG S G+G+ +A   A  GA + I   D  ++ Q  +E +    +           
Sbjct: 28  TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDA---------- 77
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCG-PVYMLVNCAGMALCGTLEE 218
                         E V+ D++ + E I +  +  +D  G  V +LVN AG+     + E
Sbjct: 78  --------------EAVAFDVTSESEIIEAFAR--LDEQGIDVDILVNNAGIQFRKPMIE 121
Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           +   D        W R             VID NL     + +   + M  RG G IV  
Sbjct: 122 LETAD--------WQR-------------VIDTNLTSAFMIGREAAKRMIPRGYGKIVNI 160
Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
            S  + L    +A YT +K  +K    A+  E  Q G+      P
Sbjct: 161 GSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGP 205

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 55/137 (40%), Gaps = 23/137 (16%)
Query: 199 GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH 258
           G V+ LVNCAG A                E+ L   G H   +  R+  V   NL GT +
Sbjct: 80  GHVHGLVNCAGTAPG--------------EKILGRSGPHALDSFARTVAV---NLIGTFN 122
Query: 259 MTKALVEGMKQRG------RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK 312
             +   E   Q        RG IV TAS AA  G  G AAY +SK  +         E+ 
Sbjct: 123 XIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELA 182
Query: 313 QSGLTITLCLPPDTDTP 329
           + G+ +    P   DTP
Sbjct: 183 RFGIRVVTIAPGIFDTP 199

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 45/221 (20%)
Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A+E A  GA V +          A                       K
Sbjct: 33  VTGASRGIGRAIALELAAAGAKVAVN--------YASSAGAADEVVAAIAAAGGEAFAVK 84
Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A               D+S++ E + +     ++R G + +LVN AG+     L  M   
Sbjct: 85  A---------------DVSQESE-VEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRD 128
Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W+S  V+DLNL G    ++A  + M ++  G I+  AS  
Sbjct: 129 D-------------------WQS--VLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVV 167
Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
             +G  G A Y+++K  + G  + +  E+   G+T+    P
Sbjct: 168 GEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAP 208

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 60/250 (24%)
Query: 87  HLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC 146
           H+ M++ L   N    VTGG+  IG       A+ GA V I   DE    +A E+++   
Sbjct: 3   HMYMEK-LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR--- 58
Query: 147 PNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVN 206
                   +E  ++               V +D++ + E++++A++   ++ G V +LV 
Sbjct: 59  --------MEGHDVSS-------------VVMDVT-NTESVQNAVRSVHEQEGRVDILVA 96
Query: 207 CAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEG 266
           CAG  +C  + E+  +D   M    WL+              +D+NL G     +A+   
Sbjct: 97  CAG--IC--ISEVKAED---MTDGQWLKQ-------------VDINLNGMFRSCQAVGRI 136
Query: 267 MKQRGRGCIVITASQAANLGIYGL--------AAYTSSKFALKGFAEALYMEVKQSGLTI 318
           M ++ +G IV   S +      GL        AAY +SK  +  +  +L  E    G+  
Sbjct: 137 MLEQKQGVIVAIGSMS------GLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA 190
Query: 319 TLCLPPDTDT 328
               P   +T
Sbjct: 191 NAVAPTYIET 200

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 50/242 (20%)
Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           +N T+ +TG S+GIG+  AI  A+ GA+VTI  R  ++L + ++ I K+  + K +  + 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV- 63
Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                           +  V+ +  +D + I S L+    + G + +LVN AG A+    
Sbjct: 64  ----------------VADVTTEDGQD-QIINSTLK----QFGKIDVLVNNAGAAIPDAF 102
Query: 217 EEM-TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKA----LVEGMKQRG 271
               T Q I +         YH  L          LNL   I MTK     LV    +  
Sbjct: 103 GTTGTDQGIDI---------YHKTL---------KLNLQAVIEMTKKVKPHLVASKGEIV 144
Query: 272 RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
               ++   QA    +Y    Y  +K AL  +  +  +++ + G+ +    P   +T GF
Sbjct: 145 NVSSIVAGPQAQPDFLY----YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVET-GF 199
Query: 332 EN 333
            N
Sbjct: 200 TN 201

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 106/282 (37%), Gaps = 63/282 (22%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  +TG + GIG+  A    + GA V I                 A  N +  R    E 
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAI-----------------ADINLEAARATAAEI 49
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
              AC           ++LD++ D  +I   +   +DR G + +LVN A +     + E+
Sbjct: 50  GPAACA----------IALDVT-DQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEI 98
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT- 278
           T             R  + RL          +N+ GT+ M +A+   M   GRG  +I  
Sbjct: 99  T-------------RESYDRL--------FAINVSGTLFMMQAVARAMIAGGRGGKIINM 137
Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP----------DTDT 328
           ASQA   G   +  Y ++K A+    ++  + + + G+ +    P           D   
Sbjct: 138 ASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKF 197
Query: 329 PGFENEEKS-KPRETSLISQTGGLYRPEVVKQSGLTITLCLP 369
             +EN  +  K R+       G + R E    +G+ I L  P
Sbjct: 198 ADYENLPRGEKKRQVGAAVPFGRMGRAE--DLTGMAIFLATP 237

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 151 FIRF--------IEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVY 202
           F+R+        I  +  +K C N      I +V  D++KD E++R+ +   + + G + 
Sbjct: 36  FVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD-EDVRNLVDTTIAKHGKLD 94
Query: 203 MLVNCAGMALCG--TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT 260
           ++    G+      ++ E   +D K                      V+D+N+YG   + 
Sbjct: 95  IMFGNVGVLSTTPYSILEAGNEDFK---------------------RVMDINVYGAFLVA 133
Query: 261 KALVEGMKQRGRGCIVITASQAANLGIYGLA-AYTSSKFALKGFAEALYMEVKQSGLTIT 319
           K     M    +G IV TAS ++     G++  YT++K A+ G   +L  E+ + G+ + 
Sbjct: 134 KHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVN 193
Query: 320 LCLPP 324
            C+ P
Sbjct: 194 -CVSP 197

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 48/224 (21%)
Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           T  VTG  SGIG+ +A   A+ GAHV    R +  + +  +EI     + + +   +  +
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAV-VADLAD 90
Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
           ++ A               +++++    R            V +LVN AG+      EE+
Sbjct: 91  LEGAA--------------NVAEELAATRR-----------VDVLVNNAGIIARAPAEEV 125
Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           +                   L  WR   V+ +NL     ++++    M   G G IV  A
Sbjct: 126 S-------------------LGRWRE--VLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIA 164
Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           S  +  G   +AAY +SK A+ G   AL  E    G+ +    P
Sbjct: 165 SMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAP 208

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRG 235
           V +D++ D + +  A     +  GPV +LV+ AG++    L  MT +  +          
Sbjct: 78  VEVDVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFE---------- 126
Query: 236 YHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTS 295
                       VI+ NL G   + +     M++   G ++  AS +   GI   A Y +
Sbjct: 127 -----------KVINANLTGAFRVAQRASRSMQRNKFGRMIFIASVSGLWGIGNQANYAA 175
Query: 296 SKFALKGFAEALYMEVKQSGLTITLCLPPDTDT 328
           SK  + G A ++  E+ ++ +T  +  P   DT
Sbjct: 176 SKAGVIGMARSIARELSKANVTANVVAPGYIDT 208

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 24/159 (15%)
Query: 188 RSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ--------------DIKVMEQPLW- 232
           + ALQ  + RC     L   +   + G++E+MT                D+ ++   L+ 
Sbjct: 43  KEALQKVVARC---LELGAASAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYN 99
Query: 233 -LRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLA 291
            L  +H  +   R    +++N +  + ++ A +  M  + +G I + +S A  +    +A
Sbjct: 100 RLTFFHGEIDNVRK--SMEVNFHSFVVLSVAAMP-MLMQSQGSIAVVSSVAGKITYPLIA 156
Query: 292 AYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDT 328
            Y++SKFAL GF   L  E  V +  ++ITLC+    DT
Sbjct: 157 PYSASKFALDGFFSTLRSEFLVNKVNVSITLCILGLIDT 195

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	475
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-45
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-45
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	9e-44
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-40
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	3e-40
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-38
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-38
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-37
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	4e-37
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-35
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-35
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-35
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-33
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-33
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-33
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	4e-33
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	5e-33
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	5e-33
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	7e-33
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	8e-33
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-32
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-32
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	3e-31
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	5e-31
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	6e-31
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-30
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-30
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-30
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-30
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-30
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-30
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	4e-30
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	5e-30
1xkq_A	280	Short-chain reductase family member (5D234); parra	6e-30
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	8e-30
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	8e-30
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	9e-30
4dqx_A	277	Probable oxidoreductase protein; structural genomi	9e-30
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-29
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-29
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-29
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-29
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-29
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-29
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-29
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-29
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-29
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-29
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	5e-29
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	7e-29
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-29
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	7e-29
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-29
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-29
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	7e-29
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	8e-29
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	9e-29
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	9e-29
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-28
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-28
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-28
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-28
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-28
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-28
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-28
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-28
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-28
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-28
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-28
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	3e-28
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-28
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-28
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	4e-28
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-28
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-28
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	7e-28
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-27
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-27
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-27
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-27
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	4e-27
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	4e-27
4e4y_A	244	Short chain dehydrogenase family protein; structur	6e-27
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	7e-27
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	8e-27
3cxt_A	291	Dehydrogenase with different specificities; rossma	8e-27
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-26
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-26
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-26
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-26
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-26
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-26
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-26
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-26
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-26
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-25
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-25
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-25
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-25
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-25
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	3e-25
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-25
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-25
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	4e-25
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	5e-25
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	5e-25
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-25
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-24
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-24
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	1e-24
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-24
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-24
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-24
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	5e-24
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	6e-24
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-24
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-23
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-23
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-23
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-23
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	5e-23
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-22
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-22
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-22
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-22
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-22
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-22
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-22
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	6e-22
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-22
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-21
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-21
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-21
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	5e-21
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	5e-21
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	6e-21
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-21
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-20
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-20
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-20
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	4e-20
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-20
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	5e-20
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	6e-20
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	6e-20
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-20
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-19
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-19
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-19
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-19
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	4e-19
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-19
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	8e-19
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-18
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-18
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-18
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-18
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-18
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-18
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	4e-18
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	5e-18
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	7e-18
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-17
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-16
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-17
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-17
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-17
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-17
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	9e-17
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-16
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-16
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-16
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-16
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-16
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-16
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	4e-16
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	4e-16
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-15
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-15
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	4e-15
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	5e-15
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-14
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	3e-14
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-11
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	8e-11
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	8e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-04
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	3e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-04
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	8e-04

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  159 bits (404), Expect = 1e-45
 Identities = 53/234 (22%), Positives = 84/234 (35%), Gaps = 49/234 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG   GIG+  A E AK  + + +   ++  L +   + K                   
Sbjct: 36  ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK-------------- 81

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +    +D S + E+I S+ +      G V +LVN AG+     L      
Sbjct: 82  ----------VHTFVVDCS-NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDP 130

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            I+                        ++N+      TKA +  M +   G IV  AS A
Sbjct: 131 QIE---------------------KTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA 169

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT---ITLCLPPDTDTPGFEN 333
            ++ +  L AY SSKFA  GF + L  E+    +T    T   P   +T   +N
Sbjct: 170 GHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN 223

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  157 bits (399), Expect = 2e-45
 Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 59/255 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SG+G+ + I   +RG  V+++ R  ++L Q +  +  A                 
Sbjct: 8   VTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAV---------------- 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D++  +E++  A   A++  G   ++++CAG    G +   T +
Sbjct: 52  -----------IGIVADLA-HHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAE 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                                R   V++ NL  TI + +  V  + +RG G +    S A
Sbjct: 100 Q-------------------IR--RVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSA 137

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A +G    + Y +SK+ ++GF E+L  E+K S L +    P    +  ++N +   P   
Sbjct: 138 AQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPS-- 195

Query: 343 SLISQTGGLYRPEVV 357
                  G   PE  
Sbjct: 196 -------GFMTPEDA 203

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  154 bits (392), Expect = 9e-44
 Identities = 51/244 (20%), Positives = 87/244 (35%), Gaps = 48/244 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L +      +                  
Sbjct: 33  VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS------------- 79

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y++  +  D       +  A    G + ML+          L    + 
Sbjct: 80  ----------AHYIAGTME-DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIH 128

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            ++                       +++N    + +T A +  M ++  G IV+ +S A
Sbjct: 129 HVR---------------------KSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLA 166

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL--TITLCLPPDTDTPGFENEEKSKPR 340
             +    +AAY++SKFAL GF  ++  E   S +  +ITLC+    DT            
Sbjct: 167 GKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVH 226

Query: 341 ETSL 344
             + 
Sbjct: 227 MQAA 230

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  146 bits (371), Expect = 1e-40
 Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 47/262 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SGIG   A E A+RGA + +   D+  L QA   ++    +   +          
Sbjct: 36  VTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV--------- 86

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+    + +      A    G V ++ + AG+ + G L +M   
Sbjct: 87  ---------------CDVR-HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD 130

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC-IVITASQ 281
           D                   WR W VID++L+G+IH  +A +  + ++G G  I  TAS 
Sbjct: 131 D-------------------WR-W-VIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASF 169

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
           A  +   GL  Y  +K+ + G AE L  EVK +G+ +++  P   +T    N E+ +  +
Sbjct: 170 AGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGAD 229

Query: 342 TSLISQTGGLYRPEVVKQSGLT 363
             + +   G + P   +   ++
Sbjct: 230 YGMSATPEGAFGPLPTQDESVS 251

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  146 bits (369), Expect = 3e-40
 Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 54/275 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG++G+G  +  +   +G  V I    +  + +A   ++     P+ +          
Sbjct: 13  VTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVM---------- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V LD++   E  + A      R GPV +L N AG+ L   +EE +  
Sbjct: 63  ------------GVQLDVA-SREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYD 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIV 276
           D                   W  W ++ +NL+G ++     V  M +R        G +V
Sbjct: 110 D-------------------WD-W-LLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVV 148

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK 336
            TAS AA L       Y ++KFA++G +E+L+  + +  + +++  P    +  + +++ 
Sbjct: 149 NTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDI 208

Query: 337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPD 371
                   +           V++        + PD
Sbjct: 209 RPDALKGEVKPV----DKTAVERLAGVHEFGMEPD 239

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  139 bits (352), Expect = 1e-38
 Identities = 46/243 (18%), Positives = 84/243 (34%), Gaps = 55/243 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSG+G  +A      G    +  R E KL      +                    
Sbjct: 6   ITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNV---------------- 49

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTM 221
                       Y + D++         ++   ++       +V+ AG    G L+E   
Sbjct: 50  -----------GYRARDLAS-----HQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDP 93

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           + I+ +                     I+ NL   I++ + LV+  K +    +V+  S 
Sbjct: 94  EQIQTL---------------------IENNLSSAINVLRELVKRYKDQPVN-VVMIMST 131

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
           AA       + Y + K+A+KG  E++ +E+K   + I    P    T  +E   KS    
Sbjct: 132 AAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTS 191

Query: 342 TSL 344
           + +
Sbjct: 192 SFM 194

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  138 bits (350), Expect = 3e-38
 Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 44/227 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG  +A   A  G  V ++AR ++ L +  +EI ++                 
Sbjct: 12  ITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN---------------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                K ++    + LDI+ D     + ++    + G V +LVN A M + G+L E    
Sbjct: 56  -----KHVQEPIVLPLDIT-DCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPV-- 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                +              +R   ++++N+     + K + E MK +  G I   AS+A
Sbjct: 108 -----DN-------------FR--KIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRA 147

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A  G      Y S+KFAL G AE+LY E+   G+ +T   P   +T 
Sbjct: 148 AKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD 194

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  135 bits (342), Expect = 4e-37
 Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 50/232 (21%)

Query: 98  NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEY 157
            G + +TG S GIG+  A     +G  V ++ARDEK+L     E++ A            
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGA------------ 52

Query: 158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
                             +  D+  +  +   A+    +  G +  LVN AG+ +   + 
Sbjct: 53  ----------------LPLPGDVR-EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVH 95

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           E+T+++                   WR   V+D NL G     +  V  + +RG G IV 
Sbjct: 96  ELTLEE-------------------WR--LVLDTNLTGAFLGIRHAVPALLRRGGGTIVN 134

Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
             S A      G AAY +SKF L G A A  ++++++ + +   LP   DT 
Sbjct: 135 VGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTG 186

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  134 bits (339), Expect = 4e-37
 Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 61/238 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + G+G   A   A +G  + +  R    L +   E+                    
Sbjct: 5   ITGATGGLGGAFA--RALKGHDLLLSGRRAGALAELAREVG------------------- 43

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D++          +  ++  GP+ +LV+  G A   ++ E    
Sbjct: 44  ----------ARALPADLAD-----ELEAKALLEEAGPLDLLVHAVGKAGRASVREAG-- 86

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                              L     ++  +L         +++  + +     V   +  
Sbjct: 87  -----------------RDLVE--EMLAAHLLTAA----FVLKHARFQKGARAVFFGAYP 123

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR 340
             + + G AAY ++K AL+ + EA   E+ + G+ + L   P   T  +         
Sbjct: 124 RYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKG 181

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  132 bits (334), Expect = 1e-35
 Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 52/257 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG  +A   AK GAH+ +VAR   +L +A   +K+                  
Sbjct: 12  ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR------------- 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  V++D++   E + + ++      G   +LVN AG     T+ E   +
Sbjct: 59  ----------VLEVAVDVA-TPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADE 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W+     +L +   + + + LV GM+ RG G I+  AS  
Sbjct: 108 K-------------------WQF--YWELLVMAAVRLARGLVPGMRARGGGAIIHNASIC 146

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A   ++    Y  +K AL  F++ L  EV +  + +    P    TP +    K   ++ 
Sbjct: 147 AVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDN 206

Query: 343 SLISQTGGLYRPEVVKQ 359
                  G      ++ 
Sbjct: 207 -------GGDWKGYLQS 216

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  130 bits (330), Expect = 2e-35
 Identities = 47/243 (19%), Positives = 91/243 (37%), Gaps = 50/243 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG+ +A   A+ G  + + AR   +L +   E+ +                  
Sbjct: 7   ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     + Y  LD+S   E++    +  ++R G V ++V  AG+     LEE++ +
Sbjct: 54  ----------VFYHHLDVS-KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEE 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   +    +I++NL G     KA ++ +K+ G   +V T+  +
Sbjct: 103 E-------------------FH--EMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVS 141

Query: 283 ANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
           A   +      Y S+K+A +       +E     +      P   DT    ++      +
Sbjct: 142 AR--LIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKPKEK 197

Query: 342 TSL 344
             L
Sbjct: 198 GYL 200

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  132 bits (333), Expect = 5e-35
 Identities = 45/272 (16%), Positives = 94/272 (34%), Gaps = 42/272 (15%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSG G+  A   A  G  V    RD      +  E          +          
Sbjct: 10  ITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVD--------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  + LD+     ++  A+   +   G + +L++ AG  + G  E  T +
Sbjct: 61  ----------LRTLELDVQ-SQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPE 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                                    + D+N+  T  + +A +  M+++  G ++  +S +
Sbjct: 110 QFA---------------------ELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSS 148

Query: 283 ANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
           +  G    LA Y ++K A+   A     E+ + G+  ++ +P    +          P +
Sbjct: 149 SAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDD 208

Query: 342 TSLISQTGGLYRPEVVKQSGLTITLCLPPDTD 373
            +  ++        + ++        +PPD D
Sbjct: 209 HARQAEYEAGPNAGLGEEIKKAFAAIVPPDAD 240

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  127 bits (321), Expect = 1e-33
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 49/221 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSG G+ +A  A   G  V   AR  + L                           
Sbjct: 10  VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDR----------------- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      E +SLD++ D E I       + R G V +LVN AG    G  EE T +
Sbjct: 53  ----------AEAISLDVT-DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTER 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +++ +                      +L+++G   +T+AL+  M++RG G +V  +S  
Sbjct: 102 ELRDL---------------------FELHVFGPARLTRALLPQMRERGSGSVVNISSFG 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
             L   G +AY+++K AL+  +E L  EV   G+ + +  P
Sbjct: 141 GQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEP 181

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  126 bits (318), Expect = 1e-33
 Identities = 52/242 (21%), Positives = 85/242 (35%), Gaps = 61/242 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+         GA V  V+R +  L     E                     
Sbjct: 12  VTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGI----------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      E V +D+  D+E    AL       GPV +LVN A +AL     E+T +
Sbjct: 55  -----------EPVCVDLG-DWEATERAL----GSVGPVDLLVNNAAVALLQPFLEVTKE 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                               +      ++NL   I +++ +  G+  RG  G IV  +SQ
Sbjct: 99  A-------------------FD--RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP----GFENEEK 336
            +   +   + Y S+K AL    + + +E+    + +  +  P    T      + +  K
Sbjct: 138 CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVN-PTVVMTSMGQATWSDPHK 196

Query: 337 SK 338
           +K
Sbjct: 197 AK 198

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  125 bits (317), Expect = 3e-33
 Identities = 45/230 (19%), Positives = 78/230 (33%), Gaps = 52/230 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGSSGIG        + GA V   ARD ++L  A+  +++  P  +            
Sbjct: 13  VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR------------ 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +     D+  D   +R+  +      G   +LVN AG     T  E T +
Sbjct: 61  ----------LFASVCDVL-DALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDE 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W     + L  +  IH  +A +  ++ R    IV   S  
Sbjct: 110 A-------------------WSE--ELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLL 148

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGF 331
           A+     + A ++++  +K    ++  E    G+ +  +         G 
Sbjct: 149 ASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGIL-------IGL 191

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  124 bits (315), Expect = 4e-33
 Identities = 49/243 (20%), Positives = 83/243 (34%), Gaps = 63/243 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+         GA V  V R    L+   +E                     
Sbjct: 12  VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGI----------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      E V +D+         A + A+   GPV +LVN A + +     E+T +
Sbjct: 55  -----------EPVCVDLGD-----WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKE 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                               +       +NL     +++ +   M  RG  G IV  +S 
Sbjct: 99  A-------------------FD--RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM 137

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPP---DTD--TPGFENEE 335
            A++    L  Y+S+K A+    +A+ ME+    + + ++   P    TD       + E
Sbjct: 138 VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVN--PTVVLTDMGKKVSADPE 195

Query: 336 KSK 338
            ++
Sbjct: 196 FAR 198

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  124 bits (315), Expect = 5e-33
 Identities = 48/227 (21%), Positives = 79/227 (34%), Gaps = 45/227 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VT GSSG+G   A+E A+ GA + + +R+ +KL  A   I       +            
Sbjct: 12  VTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ------------ 59

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     ++ V+ DI  +  +I    + A D  G   +LV   G    G   E+ ++
Sbjct: 60  ----------VDIVAGDIR-EPGDIDRLFEKARDL-GGADILVYSTGGPRPGRFMELGVE 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W       L     + + +   E M ++G G +V   S  
Sbjct: 108 D-------------------WDE--SYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVT 146

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                  LA     +  + G    L +E+   G+T+   LP    T 
Sbjct: 147 LLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTD 193

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  124 bits (314), Expect = 5e-33
 Identities = 52/234 (22%), Positives = 89/234 (38%), Gaps = 53/234 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAH-------VTIVARDEKKLLQAQEEIKKACPNPKFIRFI 155
           +TG   GIG+ +A+E A+   H       + + +R    L +   E +            
Sbjct: 7   ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL------- 59

Query: 156 EYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT 215
                             + ++ DIS D  ++R      ++R G +  LVN AG+   G 
Sbjct: 60  -----------------TDTITADIS-DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA 101

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
           L ++T +D        +                ++ NL GT  +T+AL   M+++  G I
Sbjct: 102 LSDLTEED--------FDY-------------TMNTNLKGTFFLTQALFALMERQHSGHI 140

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
               S AA       + Y  SKF  +G  E + +  ++  + IT   P    TP
Sbjct: 141 FFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTP 194

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  126 bits (318), Expect = 7e-33
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 48/230 (20%)

Query: 103 VTGGSSGIGKHVAIEAAK---RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           +TG SSGIG H+A+  A    +   V    RD K   +  E  +     P  +  ++   
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ--- 63

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                             LD+  D +++ +A +   +  G V +LV  AG+ L G LE +
Sbjct: 64  ------------------LDVR-DSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEAL 102

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
               +                      +V+D+N+ GT+ M +A +  MK+RG G +++T 
Sbjct: 103 GEDAVA---------------------SVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTG 141

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           S    +G+     Y +SKFAL+G  E+L + +   G+ ++L       T 
Sbjct: 142 SVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  124 bits (314), Expect = 8e-33
 Identities = 45/231 (19%), Positives = 83/231 (35%), Gaps = 54/231 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + GIG  +A   A  GA + +  RD  +L  A+  + +                  
Sbjct: 25  ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--------------- 69

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  V++D++ + +      + A +  G + +LVN AG++    + +   Q
Sbjct: 70  --------TDVHTVAIDLA-EPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQ 120

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                               + +   I +NL     +  A+ + M   G  G I+  AS 
Sbjct: 121 L-------------------FDA--TIAVNLRAPALLASAVGKAMVAAGEGGAIITVASA 159

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGF 331
           AA   +    AY +SK  L    + L  E+   G+   ++C       P  
Sbjct: 160 AALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVC-------PTV 203

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  123 bits (311), Expect = 1e-32
 Identities = 51/263 (19%), Positives = 91/263 (34%), Gaps = 49/263 (18%)

Query: 94  LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIR 153
           L P N T++V G    IG  +A + A  G  V    R+ +KL     EI+ A        
Sbjct: 3   LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG------- 55

Query: 154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
                   +              SLD   + + + + L  A D   P+ + +   G  + 
Sbjct: 56  -------GRI----------VARSLDAR-NEDEVTAFLN-AADAHAPLEVTIFNVGANVN 96

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
             + E T +                    +R   V ++  +      +     M   G+G
Sbjct: 97  FPILETTDRV-------------------FR--KVWEMACWAGFVSGRESARLMLAHGQG 135

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP-DTDTPGFE 332
            I  T + A+  G  G AA+ S+KF L+  A+++  E+    + +   +     DT    
Sbjct: 136 KIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR 195

Query: 333 NEEKSKPRETSLISQTGGLYRPE 355
              +    + +L +    L  P 
Sbjct: 196 ERREQMFGKDALANP-DLLMPPA 217

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  123 bits (311), Expect = 3e-32
 Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 44/217 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG SGIGK VA      GA V IV R+  KL  A +E++    N   IR+        
Sbjct: 16  VTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEP------ 69

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTM 221
                           DI+ + +    A+       G ++ +V+CAG +   G + ++  
Sbjct: 70  ---------------TDIT-NEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDS 113

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                    WR    +DLN+ GT+++ K     M + G G  V  +S 
Sbjct: 114 EA-------------------WRR--TVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSI 152

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           AA+       AY  +K A+    +    E+  S + +
Sbjct: 153 AASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRV 189

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  119 bits (301), Expect = 3e-31
 Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 59/261 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
                 GIG   + E  KR     ++    +    A  E+K   P               
Sbjct: 10  FVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVN------------ 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I + + D++      +  L+   D+   V +L+N AG+        +   
Sbjct: 57  ----------ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI--------LDDH 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRG--RGCIVITA 279
            I+                       I +N  G ++ T A+++   K++G   G I    
Sbjct: 99  QIE---------------------RTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC 137

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT-ITLCLPPDTDTPGFENEEKSK 338
           S      I+ +  Y++SK A+  F  +L      +G+T  ++  P  T TP         
Sbjct: 138 SVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSIN-PGITRTPLVHTFNSWL 196

Query: 339 PRETSLISQ--TGGLYRPEVV 357
             E  +     +      E  
Sbjct: 197 DVEPRVAELLLSHPTQTSEQC 217

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  118 bits (299), Expect = 5e-31
 Identities = 43/230 (18%), Positives = 81/230 (35%), Gaps = 54/230 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + G+G  +  + ++       + R+ + L    E                      
Sbjct: 10  VTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAALAEIEG------------------- 49

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +E +  DI          +   +     V  LV+ A +A   T+E  ++ 
Sbjct: 50  ----------VEPIESDIV-KEVLEEGGVD-KLKNLDHVDTLVHAAAVARDTTIEAGSVA 97

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   W     +DLN+     +++ L+  ++    GC++   S A
Sbjct: 98  E-------------------WH--AHLDLNVIVPAELSRQLLPALRAA-SGCVIYINSGA 135

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
            N    G   Y +SK AL+G A+A   E   +G+ ++   P  T+TP  +
Sbjct: 136 GNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ 185

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  118 bits (299), Expect = 6e-31
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 47/217 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+  A   A  GA V I AR  +KL    +E+  A                 
Sbjct: 12  ITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAK-------------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  + LD++ D + + +A+   ++  G + +LVN AG+ L G +E+    
Sbjct: 58  ----------VHVLELDVA-DRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTT 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D   M                     ID NL G ++MT+A +  +  R +G +V  +S A
Sbjct: 107 DWTRM---------------------IDTNLLGLMYMTRAALPHLL-RSKGTVVQMSSIA 144

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
             + +   A Y ++KF +  F+E L  EV + G+ + 
Sbjct: 145 GRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVV 181

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  118 bits (297), Expect = 2e-30
 Identities = 46/210 (21%), Positives = 83/210 (39%), Gaps = 46/210 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG+ +A E    GA + + AR + ++     EI+ A                 
Sbjct: 9   ITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGT-------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          LD++ D  ++ +  Q A+D  G + +LVN AG+     L  + + 
Sbjct: 55  ----------ALAQVLDVT-DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVD 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           + + M                     ID+N+ G +    A++  M+ +  G I+   S  
Sbjct: 104 EWERM---------------------IDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIG 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVK 312
           A   +   A Y ++KFA++  ++ L  E  
Sbjct: 143 ALSVVPTAAVYCATKFAVRAISDGLRQEST 172

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  117 bits (295), Expect = 2e-30
 Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 43/227 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+  A+  A+ GA V ++ R+E+KL Q    I +                  
Sbjct: 17  VTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE----------------- 59

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
               P++      + L      EN +   Q        +  +++ AG+   G +  M+ Q
Sbjct: 60  TGRQPQWFI----LDLLTC-TSENCQQLAQRIAVNYPRLDGVLHNAGLL--GDVCPMSEQ 112

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           + +V     W               V+ +N+  T  +T+AL+  + +   G +V T+S  
Sbjct: 113 NPQV-----WQD-------------VMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSV 154

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
              G     AY +SKFA +G  + L  E  Q  L +    P  T T 
Sbjct: 155 GRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCINPGGTRTA 200

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  117 bits (296), Expect = 2e-30
 Identities = 56/229 (24%), Positives = 86/229 (37%), Gaps = 51/229 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  +A +    GA V + ARD +KL   + EI  A                +
Sbjct: 34  VTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--------------GE 79

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
           A          E  + D+S   + I +     +   G   +LVN AG     G L  M  
Sbjct: 80  A----------ESHACDLS-HSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKP 128

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            +                   W    +I +NL     + +A    M    RG I+  +S 
Sbjct: 129 AE-------------------WD--ALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSL 167

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP---DTD 327
           A    +   AAYT+SK+ L G   +   E++Q  + ++  + P    T+
Sbjct: 168 AGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVS-LVAPGSVRTE 215

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  117 bits (296), Expect = 3e-30
 Identities = 45/259 (17%), Positives = 87/259 (33%), Gaps = 52/259 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG    IG   A+  A+ G  + ++  + + L +A+  +++     +            
Sbjct: 12  VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV--------- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTM 221
                           D++   E +   +   +   G +  L N AG       +++   
Sbjct: 63  ---------------CDVT-SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS 106

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            D                   +    V+ +N+ G  H+ KA+   M  +  G IV TAS 
Sbjct: 107 DD-------------------FA--RVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASM 145

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKPR 340
           A   G   +AAY +SK A+    E   +++    + +  +  P           +     
Sbjct: 146 AGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAIS-PGYMGPGFMWERQVELQA 204

Query: 341 ETSLISQTGGLYRPEVVKQ 359
           +      +     P+VV Q
Sbjct: 205 KVGSQYFSTD---PKVVAQ 220

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  117 bits (296), Expect = 3e-30
 Identities = 46/221 (20%), Positives = 76/221 (34%), Gaps = 50/221 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  VA    ++G  V   AR    + +   E K A      I          
Sbjct: 37  VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI---------- 86

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+S + E+I S       +   V + +N AG+A   TL   +  
Sbjct: 87  ------------PYRCDLS-NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTS 133

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG--RGCIVITAS 280
             K M                      ++N+      T+   + MK+R    G I+   S
Sbjct: 134 GWKDM---------------------FNVNVLALSICTREAYQSMKERNVDDGHIININS 172

Query: 281 QAANLGIY---GLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            +    +        Y+++K+A+    E L  E++++   I
Sbjct: 173 MSG-HRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHI 212

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  117 bits (295), Expect = 3e-30
 Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 50/232 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           ++G    +G  +A   A++GA + + AR  ++L    +++         +          
Sbjct: 16  ISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVG--------- 66

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
                           DI+ D   +   +   M   G V +++N A  +         T 
Sbjct: 67  ---------------TDIT-DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTF 110

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                     R    I+L ++G + + +     +++   G +V   S 
Sbjct: 111 EH-------------------MRD--AIELTVFGALRLIQGFTPALEESK-GAVVNVNSM 148

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFE 332
                     AY  +K AL   ++ L  E+ + G+ + ++  P        +
Sbjct: 149 VVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVL-PGYIWGGTLK 199

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  117 bits (295), Expect = 4e-30
 Identities = 46/252 (18%), Positives = 88/252 (34%), Gaps = 53/252 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG  +  E A  GA V   +R+EK+L +  E  ++   N +            
Sbjct: 26  VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVC-------- 77

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDR-CGPVYMLVNCAGMALCGTLEEMTM 221
                           D+          +Q       G + +LVN AG+ +    ++ T 
Sbjct: 78  ----------------DLL-SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE 120

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                   +    ++  N     H+++     +K    G ++  +S 
Sbjct: 121 KD-------------------YN--IIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSI 159

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP---DTD--TPGFENEEK 336
           A    +  ++ Y++SK A+    ++L  E  +  + +   + P    T       +    
Sbjct: 160 AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVN-SVAPGVILTPLVETAIKKNPH 218

Query: 337 SKPRETSLISQT 348
            K    + I +T
Sbjct: 219 QKEEIDNFIVKT 230

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  116 bits (293), Expect = 5e-30
 Identities = 49/229 (21%), Positives = 82/229 (35%), Gaps = 45/229 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG   A   A  GA V ++ R E  L +  ++IK A      I  +       
Sbjct: 19  VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN------ 72

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTM 221
                          L+ +   +  R          G +  L++ A +      LE++  
Sbjct: 73  ---------------LENA-TAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPD 116

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                   +    V+ +N+  T  +T+AL+  +K+     I  T+S 
Sbjct: 117 ED-------------------FM--QVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSS 155

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVK-QSGLTITLCLPPDTDTP 329
               G     AY  SKFA +G  + L  E++  + +      P  T T 
Sbjct: 156 VGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG 204

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  116 bits (294), Expect = 6e-30
 Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 41/217 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S+GIG+  AI  A+ GA+VTI  R  ++L + ++ I K+  + K +          
Sbjct: 11  ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS-------- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D++   +     +   + + G + +LVN AG A+          
Sbjct: 63  -------------VVADVT-TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTG-- 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                +Q          + ++     + LNL   I MTK +   +     G IV  +S  
Sbjct: 107 ----TDQG---------IDIYHK--TLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIV 150

Query: 283 ANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           A          Y  +K AL  +  +  +++ + G+ +
Sbjct: 151 AGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRV 187

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  115 bits (291), Expect = 8e-30
 Identities = 45/214 (21%), Positives = 74/214 (34%), Gaps = 53/214 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV--ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           VTG S GIGK +            +   AR E  L + +E+                   
Sbjct: 7   VTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRF-------------- 52

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEM 219
                         YV  DI+ +   ++  +  A+   G +  LV  AG +     + E+
Sbjct: 53  -------------FYVVGDIT-EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEI 98

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
            +                     W+   + D+N +  + +    +  +K+   G +V  +
Sbjct: 99  DVNA-------------------WKK--LYDINFFSIVSLVGIALPELKKTN-GNVVFVS 136

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ 313
           S A N+      AY SSK AL  FA  L  E +Q
Sbjct: 137 SDACNMYFSSWGAYGSSKAALNHFAMTLANEERQ 170

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  116 bits (292), Expect = 8e-30
 Identities = 50/216 (23%), Positives = 79/216 (36%), Gaps = 50/216 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG  +A    K GA V I   D          ++                   
Sbjct: 17  VTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG---------------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D++    ++ +A+Q A+D  G   +L   AG++      ++T +
Sbjct: 61  -----------FAVEVDVT-KRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDE 108

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITASQ 281
           +                   W      D+N  G     +           +G IV TAS 
Sbjct: 109 E-------------------WDF--NFDVNARGVFLANQIACRHFLASNTKGVIVNTASL 147

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
           AA +G   LA Y++SKFA+ G+ +AL  E+    + 
Sbjct: 148 AAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIR 183

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  116 bits (292), Expect = 9e-30
 Identities = 47/217 (21%), Positives = 84/217 (38%), Gaps = 52/217 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG+ +A   ++ G  + ++AR  ++L                      + +  
Sbjct: 21  ITGASSGIGEAIARRFSEEGHPLLLLARRVERL----------------------KALNL 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +D++ D     +A+  A    GP   +VN AGM L G ++     
Sbjct: 59  PN--------TLCAQVDVT-DKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEAN 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           + + M                      D+N+ G ++  +A++  MK R  G I+  +S A
Sbjct: 110 EWQRM---------------------FDVNVLGLLNGMQAVLAPMKARNCGTIINISSIA 148

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
                   AAY  +KFA+   +E +  EV  S + + 
Sbjct: 149 GKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVM 185

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  116 bits (293), Expect = 9e-30
 Identities = 54/238 (22%), Positives = 90/238 (37%), Gaps = 51/238 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG SGIG+  A   AK GA+V +   +E   ++   EI                    
Sbjct: 32  VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKA---------------- 75

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D+S   ++  S ++    + G V +LVN AG    G +  +  +
Sbjct: 76  -----------FGVRVDVS-SAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEE 123

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                    W R             ++ +N+ G    +K ++  M++ G G I+ T S  
Sbjct: 124 T--------WDR-------------IMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYT 162

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKP 339
           A   I    AY +SK A+     A+ M+  + G+ +  +  P   D+P F        
Sbjct: 163 ATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVA-PGTIDSPYFTKIFAEAK 219

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  115 bits (291), Expect = 1e-29
 Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 48/230 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG ++GIGK +A      GA+V I  R E+ + +  +EI+   P+              
Sbjct: 15  VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAI------------ 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     ++ V  D+  +        Q  +++   V +L+N  G+       ++  +
Sbjct: 63  ----------LQPVVADLGTE-----QGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDE 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        W +             + ++N+   + +T++ ++ M +R  G ++  AS+A
Sbjct: 108 D--------WFK-------------LFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEA 146

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
           A +    +A Y+++K      + +L      + +T+   +P  T T G E
Sbjct: 147 AIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVE 196

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  115 bits (291), Expect = 2e-29
 Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 52/239 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK- 161
           +TG S GIG  +A+ AA+ GA+V I A+      +    I  A              +  
Sbjct: 11  ITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAA-----------AAVNA 59

Query: 162 ---KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE 218
              +             +  DI  + + +R+A+   +D  G + +LVN A         +
Sbjct: 60  AGGQGLA----------LKCDIR-EEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLD 108

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
             M+                    +    +  +N  G+    +A +  + Q     I+  
Sbjct: 109 TPMKR-------------------FD--LMQQVNARGSFVCAQACLPHLLQAPNPHILTL 147

Query: 279 ASQAANLGIY--GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT--DTPGFEN 333
           A   +    +      YT +K  +      L  E    G+ I   L P T   T     
Sbjct: 148 APPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAIN-ALWPRTVIATDAINM 205

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  115 bits (290), Expect = 2e-29
 Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 49/211 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S+GIGK VA+  A+ GA V + AR    L    +EI                   K
Sbjct: 37  ITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--------------GK 82

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A P          +  D++   + +R  L       G + + V  AG+     + +M ++
Sbjct: 83  ALP----------IRCDVT-QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLE 131

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
           +                   ++   + D N+ G     +A    M  +G  G I+ TAS 
Sbjct: 132 E-------------------FQR--IQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASM 170

Query: 282 AANLGIYG--LAAYTSSKFALKGFAEALYME 310
           + ++      ++ Y +SK A+    +A+ +E
Sbjct: 171 SGHIINIPQQVSHYCTSKAAVVHLTKAMAVE 201

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  114 bits (288), Expect = 2e-29
 Identities = 46/271 (16%), Positives = 84/271 (30%), Gaps = 61/271 (22%)

Query: 103 VTGGSSGIGKHVAIEAAK---RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           +TG S G G+ +A + A+    G+ + + AR E  L Q +EE+    P+ K +       
Sbjct: 11  LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV------- 63

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGP----VYMLVNCAGMALCGT 215
                            + D+      ++  L    +   P      +L+N A      +
Sbjct: 64  ---------------LAAADLG-TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVS 107

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG--RG 273
              + + D                LA   +     LNL   + +T   +   +       
Sbjct: 108 KGFLNVND----------------LAEVNN--YWALNLTSMLCLTSGTLNAFQDSPGLSK 149

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP---DTD--- 327
            +V  +S  A     G   Y + K A     + L  E  +  + + L   P   D D   
Sbjct: 150 TVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRV-LSYAPGPLDNDMQQ 206

Query: 328 -TPGFENEEKSKPRETSLISQTGGLYRPEVV 357
                  + + + +   L    G L      
Sbjct: 207 LARETSKDPELRSKLQKLK-SDGALVDCGTS 236

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  115 bits (290), Expect = 2e-29
 Identities = 48/251 (19%), Positives = 96/251 (38%), Gaps = 56/251 (22%)

Query: 95  APTNGTLS-----VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNP 149
            P + +L      ++GGS GIG  +A   A  GA+V +VA+  +   +    I  A    
Sbjct: 1   GPGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAA--- 57

Query: 150 KFIRFIEYEEIK----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLV 205
                   +EI+    +A P          +  DI  D + + +A+   +++ G + + V
Sbjct: 58  --------KEIEEAGGQALP----------IVGDIR-DGDAVAAAVAKTVEQFGGIDICV 98

Query: 206 NCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE 265
           N A     G++EE+ ++                    +    +  + + GT  ++++ + 
Sbjct: 99  NNASAINLGSIEEVPLKR-------------------FD--LMNGIQVRGTYAVSQSCIP 137

Query: 266 GMKQRGRGCIVITAS-QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP 324
            MK R    I+  +              Y  +K+ +   A  +  E++ +G+     L P
Sbjct: 138 HMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASN-TLWP 196

Query: 325 DT--DTPGFEN 333
            T   T   +N
Sbjct: 197 RTTVATAAVQN 207

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  114 bits (288), Expect = 3e-29
 Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 47/216 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIGK +A+   K G  V I   ++        EI +A  +   ++         
Sbjct: 7   VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVK--------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +D+S D + + +A++ A    G   ++VN AG+A    +E +T +
Sbjct: 58  ---------------VDVS-DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPE 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                                    V ++N+ G I   +A VE  K+ G  G I+   SQ
Sbjct: 102 I-------------------VD--KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ 140

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
           A ++G   LA Y+SSKFA++G  +    ++   G+T
Sbjct: 141 AGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGIT 176

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  114 bits (289), Expect = 3e-29
 Identities = 53/216 (24%), Positives = 82/216 (37%), Gaps = 48/216 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SGIG+ +A   A+ GAHV    R +  + +  +EI                    
Sbjct: 36  VTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGG---------------- 78

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      E V  D++ D E   +  +  +     V +LVN AG+      EE+++ 
Sbjct: 79  --------GSAEAVVADLA-DLEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLG 128

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               WR   V+ +NL     ++++    M   G G IV  AS  
Sbjct: 129 R-------------------WR--EVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASML 167

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           +  G   +AAY +SK A+ G   AL  E    G+ +
Sbjct: 168 SFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGV 203

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  114 bits (288), Expect = 3e-29
 Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 51/228 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V+GG+ G+G          GA V      +++      E+  A                 
Sbjct: 12  VSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA---------------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       YV LD++      ++A+  A+   G +++LVN AG+   GT+E+  + 
Sbjct: 56  -----------RYVHLDVT-QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   W+   ++D+NL G     +A+V+ MK+ GRG I+  +S  
Sbjct: 104 E-------------------WQ--RILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
              G      YT++KFA++G  ++  +E+  SG+ + ++  P    TP
Sbjct: 143 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIH-PGLVKTP 189

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  114 bits (288), Expect = 4e-29
 Identities = 49/243 (20%), Positives = 90/243 (37%), Gaps = 47/243 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SG+G+  A+  A  GA +++V    + L  ++  + +  P+ + +          
Sbjct: 18  ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVL---------- 67

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
                           D+S D   + + +    +R G +    N AG        E  T 
Sbjct: 68  ------------TTVADVS-DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTA 114

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            +                   +    V+ +NL G     + +++ M+++G G +V TAS 
Sbjct: 115 AE-------------------FD--KVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASV 153

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKPR 340
               GI   + Y ++K  + G      +E  + G+ I  +  P    TP  EN  K    
Sbjct: 154 GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIA-PGAIWTPMVENSMKQLDP 212

Query: 341 ETS 343
           E  
Sbjct: 213 ENP 215

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  114 bits (287), Expect = 4e-29
 Identities = 47/219 (21%), Positives = 85/219 (38%), Gaps = 49/219 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+  IG       A+ GA V I   DE    +A E+++    +   +          
Sbjct: 18  VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVV--------- 68

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL-EEMTM 221
                          +D++ + E++++A++   ++ G V +LV CAG+ +     E+MT 
Sbjct: 69  ---------------MDVT-NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTD 112

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                W     +D+NL G     +A+   M ++ +G IV   S 
Sbjct: 113 GQ-------------------WLK--QVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSM 151

Query: 282 AANLG--IYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           +  +       AAY +SK  +  +  +L  E    G+  
Sbjct: 152 SGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA 190

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  113 bits (286), Expect = 5e-29
 Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 51/228 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ G+G   A +A   GA V +    +++      E+  A                 
Sbjct: 10  ITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA---------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y  LD++   E+ +  +  A +  G V  LVN AG++    LE  +++
Sbjct: 54  -----------RYQHLDVT-IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               +R   V+++NL G     K ++  MK  G G IV  +S A
Sbjct: 102 R-------------------FR--KVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
             +G+   ++Y +SK+ ++G ++   +E+    + + ++  P  T TP
Sbjct: 141 GLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH-PGMTYTP 187

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  113 bits (285), Expect = 7e-29
 Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 47/217 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + G+G   A   A  GA V +       L ++ + + +                  
Sbjct: 14  VTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---------------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V+ D++ D   I +A          V +L+N AG+     + E+ ++
Sbjct: 58  --------YDAHGVAFDVT-DELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELE 108

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
           +                   W+   VID NL     ++++  + M  R   G I+   S 
Sbjct: 109 N-------------------WQK--VIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL 147

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            +      +A YT++K  +K    ++  E  Q  +  
Sbjct: 148 TSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  113 bits (285), Expect = 7e-29
 Identities = 48/218 (22%), Positives = 77/218 (35%), Gaps = 51/218 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SGIG  +    A  GA + ++ R+   L +A +E+                    
Sbjct: 16  VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA------------------ 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D++ D E + +A     +   PV +LVN AG+A      E    
Sbjct: 58  --------AVAARIVADVT-DAEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDA 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               WR   V+ +N+ G    ++A    M  RG G IV   S +
Sbjct: 108 T-------------------WRQ--VMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMS 146

Query: 283 ANLGIYGL--AAYTSSKFALKGFAEALYMEVKQSGLTI 318
             +       ++Y +SK A+     AL  E    G+ +
Sbjct: 147 GTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRV 184

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  113 bits (286), Expect = 7e-29
 Identities = 50/231 (21%), Positives = 84/231 (36%), Gaps = 54/231 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI-KKACPNPKFIRFIEYEEIK 161
           VTG  SG+G+ VA+  A  G  V +  R    L +   EI   A                
Sbjct: 33  VTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDA---------------- 76

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-LEEMT 220
                         V  D++ D +++R+     +++ G V +L N AG       +E++T
Sbjct: 77  ------------LCVPTDVT-DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLT 123

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR--GCIVIT 278
                                 W+   V+D NL G    T+     MK +    G I+  
Sbjct: 124 FAQ-------------------WK--QVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINN 162

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
            S +A       A YT++K A+ G  ++  ++ +   +        + DTP
Sbjct: 163 GSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTP 213

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  113 bits (286), Expect = 7e-29
 Identities = 58/228 (25%), Positives = 82/228 (35%), Gaps = 51/228 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  +GIG  VA   A  G HV     D      A  +I                    
Sbjct: 34  VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGA---------------- 77

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +D+S D + I + +   +   G V  LV  AG+    +L + T++
Sbjct: 78  -----------AACRVDVS-DEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVE 125

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        + R             VI +NL G    TK     M +RG G IV  +S A
Sbjct: 126 D--------FDR-------------VIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLA 164

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
             + + G  AY  SK  +   +     E++ SG+   TL  P   DTP
Sbjct: 165 GQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLL-PAFVDTP 211

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  113 bits (286), Expect = 7e-29
 Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 56/201 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGSSGIG  V     + GA V  V+ DEK  +   +  K                   
Sbjct: 19  VTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK------------------- 59

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +D++ + E ++ A++    + G + +LVN AG+     L     +
Sbjct: 60  ---------------IDVT-NEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTE 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               WR   +ID+N+ G+  M K  +  M   G G I+  AS  
Sbjct: 104 I-------------------WR--RIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQ 142

Query: 283 ANLGIYGLAAYTSSKFALKGF 303
           +       AAY +SK AL G 
Sbjct: 143 SYAATKNAAAYVTSKHALLGL 163

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  113 bits (286), Expect = 7e-29
 Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 53/258 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SGIG  +A   AK GA++ +            +EI+              +E+  
Sbjct: 30  ITGSTSGIGLAIARTLAKAGANIVLNGFGA------PDEIRTVT-----------DEVAG 72

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     + +   D++     I   +    DR G   +LVN AG+     +E+  ++
Sbjct: 73  LSSGT-----VLHHPADMT-KPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVE 126

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W    +I +NL  + H  +  +  MK++G G I+  AS  
Sbjct: 127 Q-------------------WDR--IIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAH 165

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKPRE 341
             +     +AY ++K  + G  + + +EV +SG+T+ ++C P    TP  E +   + R 
Sbjct: 166 GLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSIC-PGYVLTPLVEKQIPDQART 224

Query: 342 TSLISQTGGLYRPEVVKQ 359
                   G+   +V+ +
Sbjct: 225 R-------GITEEQVINE 235

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  113 bits (285), Expect = 8e-29
 Identities = 42/217 (19%), Positives = 79/217 (36%), Gaps = 47/217 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG  +  E A  GA V   +R++K+L     + +                   
Sbjct: 14  VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS------------------ 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDR-CGPVYMLVNCAGMALCGTLEEMTM 221
                K  +    V  D+S      +  +    +   G + +LVN AG+ +    ++ T+
Sbjct: 56  -----KGFKVEASV-CDLS-SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTV 108

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                   +    ++ +N     H++      +K   RG +V  +S 
Sbjct: 109 ED-------------------YS--LIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV 147

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           +  L +   A Y ++K A+      L  E  +  + +
Sbjct: 148 SGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 184

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  113 bits (285), Expect = 9e-29
 Identities = 44/228 (19%), Positives = 70/228 (30%), Gaps = 59/228 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG  V       GA V +  R    +                           
Sbjct: 33  VTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------------------------ 68

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       ++  D+  +               G + ++VN AG+   G + E T  
Sbjct: 69  -----------LHLPGDLR-EAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDA 116

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W     + +N+     + +A +  M   G G IV  AS  
Sbjct: 117 D-------------------WS--LSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCW 155

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
                 G A Y  +K AL    + + M+    G+ I  +C P + +TP
Sbjct: 156 GLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVC-PNEVNTP 202

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  115 bits (289), Expect = 9e-29
 Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 53/239 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK- 161
           +TG S GIGK +A++AAK GA++ I A+  +   +    I  A            EEI+ 
Sbjct: 50  ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAA-----------EEIEA 98

Query: 162 ---KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE 218
              KA P            +D+  D + I +A++ A+ + G + +LVN A         +
Sbjct: 99  VGGKALP----------CIVDVR-DEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLD 147

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
              +                         ++++N  GT   +KA +  +K+     I+  
Sbjct: 148 TPTKR-------------------LD--LMMNVNTRGTYLASKACIPYLKKSKVAHILNI 186

Query: 279 ASQAANLGIY--GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT--DTPGFEN 333
           +       ++     AYT +K+ +  +   +  E K   + +   L P T   T   + 
Sbjct: 187 SPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVN-ALWPKTAIHTAAMDM 243

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  113 bits (285), Expect = 1e-28
 Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 51/236 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S+GIG+  A+  A+ GA VTI  R  ++L + +++I  A  + + +          
Sbjct: 11  ITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS-------- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG----TLEE 218
                        V  D++         L   + + G + +LVN AG A+      T   
Sbjct: 63  -------------VVADVT-TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTA 108

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
            +++                    +     ++LNL   I +TK  V  +     G IV  
Sbjct: 109 QSIES-------------------YD--ATLNLNLRSVIALTKKAVPHLSSTK-GEIVNI 146

Query: 279 ASQAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFE 332
           +S A+ L        Y+ +K A+  +     +++ Q G+ + ++  P    T    
Sbjct: 147 SSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSIS-PGLVATGFGS 201

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  113 bits (285), Expect = 1e-28
 Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 48/221 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRG---AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           +TG S+GIGK  A+E  +       + + AR  +KL + ++ I +  PN K         
Sbjct: 38  ITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAK--------- 88

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEE 218
                        +    LDI+   E I+  ++        + +LVN AG AL    + +
Sbjct: 89  -------------VHVAQLDIT-QAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQ 134

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
           +  +DI+ +                      D N+   I++T+A++   + +  G IV  
Sbjct: 135 IATEDIQDV---------------------FDTNVTALINITQAVLPIFQAKNSGDIVNL 173

Query: 279 ASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
            S A        + Y +SKFA+  F ++L  E+  + + + 
Sbjct: 174 GSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVI 214

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  112 bits (283), Expect = 1e-28
 Identities = 43/218 (19%), Positives = 84/218 (38%), Gaps = 50/218 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG ++G G+ +     ++G  V    R +++L + ++E+                    
Sbjct: 5   VTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL---------------- 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTM 221
                          LD+  +   I   L         + +LVN AG+AL      + ++
Sbjct: 49  -----------YIAQLDVR-NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASV 96

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D + M                     ID N  G ++MT+A++ GM +R  G I+   S 
Sbjct: 97  EDWETM---------------------IDTNNKGLVYMTRAVLPGMVERNHGHIINIGST 135

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
           A +    G   Y ++K  ++ F+  L  ++  + + +T
Sbjct: 136 AGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVT 173

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  113 bits (286), Expect = 1e-28
 Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 43/217 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S+GIG+  A+  AK GA VTI  R+E +L + +++I KA    + I          
Sbjct: 31  ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA-------- 82

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D++ +       +   + + G + +LVN AG  L          
Sbjct: 83  -------------VVADVT-EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQP 128

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               +E              ++      LN    I MT+   E + +   G IV  +S  
Sbjct: 129 ----VEL-------------YQ--KTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIV 168

Query: 283 ANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           A      G   Y  +K AL  +     +++ Q G+ +
Sbjct: 169 AGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRV 205

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  113 bits (284), Expect = 1e-28
 Identities = 42/219 (19%), Positives = 81/219 (36%), Gaps = 49/219 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SG G+  A   A+ G  + +  R E++L     E+                    
Sbjct: 26  ITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTR--------------- 70

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTM 221
                     +  ++LD+  D   + +A+    +    +  L+N AG+AL     +   +
Sbjct: 71  ----------VLPLTLDVR-DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDL 119

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC-IVITAS 280
            D   M                     +D N+ G ++ T+ L+  +   G G  IV   S
Sbjct: 120 DDWDTM---------------------VDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS 158

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
            A      G   Y  +K  ++ F+  L  +++ +G+ +T
Sbjct: 159 VAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVT 197

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  112 bits (283), Expect = 2e-28
 Identities = 46/230 (20%), Positives = 76/230 (33%), Gaps = 48/230 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG +G+G+ +A   +  G  V I  R    L  A  EI     N              
Sbjct: 38  VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN-------------I 84

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTM 221
                        V  D+  D + + +           + +LVN AG  +    LEE+T 
Sbjct: 85  V----------RAVVCDVG-DPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTF 133

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR--GCIVITA 279
           +                    W    ++  NL G    T+     MK +    G I+   
Sbjct: 134 EQ-------------------WNG--IVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNG 172

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           S +A       A YT++K A+ G  ++  ++ +   +        +  T 
Sbjct: 173 SISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATD 222

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  111 bits (280), Expect = 2e-28
 Identities = 46/229 (20%), Positives = 87/229 (37%), Gaps = 58/229 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +T  + GIG+  A+  A+ GA V     +E KL + ++                      
Sbjct: 11  LTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG------------------- 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I+   LD++K     +  +    +    + +L N AG    GT+ +   +
Sbjct: 52  ----------IQTRVLDVTK-----KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEK 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        W                ++LN+     M KA +  M  +  G I+  +S A
Sbjct: 97  D--------WDF-------------SMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVA 135

Query: 283 ANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
           +++ G+     Y+++K A+ G  +++  +  Q G+    +C P   DTP
Sbjct: 136 SSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVC-PGTVDTP 183

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  111 bits (281), Expect = 3e-28
 Identities = 48/228 (21%), Positives = 82/228 (35%), Gaps = 54/228 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG+ +A   A+ GA V +     +   +  E I  A                 
Sbjct: 11  VTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGA----------------- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +  +D+  D       ++ A    G V +LVN A +A  G+   + + 
Sbjct: 53  ------------FFQVDLE-DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLP 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   V+++NL   +H++      M++ G G IV  AS  
Sbjct: 100 E-------------------WR--RVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ 138

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
                   AAY +SK  L     +L +++    + +  +  P    T 
Sbjct: 139 GLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA-PGAIATE 185

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  112 bits (282), Expect = 3e-28
 Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 45/216 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG  +A    + G H  I +R   ++L A  ++  A                 
Sbjct: 32  ITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR------------- 78

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +S+D+      + +A+  A+   G + +L+NCA          ++  
Sbjct: 79  ----------CLPLSMDVR-APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFN 127

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               ++  TV+D++  GT ++++ L E   +   G IV   +  
Sbjct: 128 A-------------------FK--TVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATL 166

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            N G        S+K A+      L +E     + +
Sbjct: 167 GNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRV 202

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  111 bits (281), Expect = 3e-28
 Identities = 42/217 (19%), Positives = 91/217 (41%), Gaps = 46/217 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS G+G  +A   A+ G  V + +R+ ++  +A +++ +                  
Sbjct: 26  VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--------------- 70

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  +  + +   D+S +YE ++  L+   ++ G +  +VN AG+      EE  + 
Sbjct: 71  -------VETMAFR-CDVS-NYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD 121

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS-Q 281
           +                   +R   VI++NL+GT ++ +     +++     I+   S  
Sbjct: 122 E-------------------FRQ--VIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT 160

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
              + +  ++AY +SK  +    +AL  E  + G+ +
Sbjct: 161 VEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 197

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  111 bits (281), Expect = 3e-28
 Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 47/217 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VT  + GIG  +A   A+ GAHV + +R ++ + +    ++    +              
Sbjct: 19  VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGT---------- 68

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGTLEEMTM 221
            C               +    E+    +  A++  G V +LV+ A +    G + + T 
Sbjct: 69  VC--------------HVG-KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATE 113

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                    W    ++ +N+  T+ MTKA+V  M++RG G ++I +S 
Sbjct: 114 EV-------------------WDK--ILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSV 152

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            A      L  Y  SK AL G  + L +E+    + +
Sbjct: 153 GAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRV 189

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  112 bits (283), Expect = 3e-28
 Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 46/217 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG +G+GK +    +  GA   I +R    L    E+I     N              
Sbjct: 31  ITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK------------- 77

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  +  D+  D + +++ +   +   G   +++N A        E ++  
Sbjct: 78  ----------VHAIQCDVR-DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN 126

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITASQ 281
                               W+  T+ D+ L GT  +T  + + + K +     +   + 
Sbjct: 127 A-------------------WK--TITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI 165

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            A  G   +    S+K  ++  +++L  E  + G+  
Sbjct: 166 YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRF 202

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  111 bits (280), Expect = 4e-28
 Identities = 45/217 (20%), Positives = 85/217 (39%), Gaps = 52/217 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI-KKACPNPKFIRFIEYEEIK 161
           +TG + GIG+  A    + GA V I   D ++  QA  EI   A                
Sbjct: 13  ITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAY--------------- 57

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         V +D++   ++I +A+   ++  G + +LVN A +     + E+T 
Sbjct: 58  -------------AVQMDVT-RQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITR 103

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITAS 280
           +                    +    +  +N+ GT+   +A    M  +GR G I+  AS
Sbjct: 104 ES-------------------YE--KLFAINVAGTLFTLQAAARQMIAQGRGGKIINMAS 142

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
           QA   G   +A Y ++K A+    ++  +++ +  + 
Sbjct: 143 QAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  111 bits (281), Expect = 4e-28
 Identities = 47/247 (19%), Positives = 94/247 (38%), Gaps = 54/247 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG  GIG  +       GA V I  +DE      ++E+  A                 
Sbjct: 14  VTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAV---------------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
                       ++  D++   +++++ +   + R G +  +VN AG        EE + 
Sbjct: 58  ------------FILCDVT-QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSA 104

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           Q         + +             +++LNL GT  +TK  +  +++  +G ++  +S 
Sbjct: 105 QG--------FRQ-------------LLELNLLGTYTLTKLALPYLRK-SQGNVINISSL 142

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKPR 340
              +G      Y ++K A+    +AL ++    G+ +  +  P +  TP +E      P 
Sbjct: 143 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCIS-PGNIWTPLWEELAALMPD 201

Query: 341 ETSLISQ 347
             + I +
Sbjct: 202 PRASIRE 208

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  111 bits (281), Expect = 4e-28
 Identities = 52/255 (20%), Positives = 96/255 (37%), Gaps = 49/255 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG  SGIG+  A+  A  G  V  + R   ++ +  +EI  A      +          
Sbjct: 33  ITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALE--------- 83

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTM 221
                           D+S D   +R+A++  + + G + ++V  AG+  +   ++++  
Sbjct: 84  ---------------ADVS-DELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKP 127

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            +                   W     I +NL GT       V  +KQRG G IV+ +S 
Sbjct: 128 FE-------------------WD--ETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSI 166

Query: 282 AA--NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
                    G  AYT++K A     + L +E+ +  + +    P   +T   +N +    
Sbjct: 167 NGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE 226

Query: 340 RETSLISQTGGLYRP 354
            ET++  +      P
Sbjct: 227 EETAIPVEWPKGQVP 241

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  111 bits (279), Expect = 5e-28
 Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 57/208 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A      G+ V  ++  +    +                         
Sbjct: 13  VTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY------------------------ 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      +++  D++ + + +++++       G + +LVN AG+   G +E M+M 
Sbjct: 49  -----------DHIECDVT-NPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMG 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   +ID+NL+G  + +K  +  M +     IV  +S  
Sbjct: 97  E-------------------WR--RIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQ 135

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYME 310
           A++     +AY +SK A+ G  +++ ++
Sbjct: 136 ASIITKNASAYVTSKHAVIGLTKSIALD 163

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  111 bits (281), Expect = 5e-28
 Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 44/217 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG++GIGK +  E  + G++V I +R  ++L  A +E++   P  K  R         
Sbjct: 23  VTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQAR--------- 73

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  +  +I  + E + + ++  +D  G +  LVN  G       E ++ +
Sbjct: 74  ----------VIPIQCNIR-NEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSK 122

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV-ITASQ 281
                               W    V++ NL GT +M KA+     +   G IV I    
Sbjct: 123 G-------------------WH--AVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-- 159

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
               G        +++  +    ++L +E   SG+ I
Sbjct: 160 PTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRI 196

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  110 bits (278), Expect = 7e-28
 Identities = 44/216 (20%), Positives = 79/216 (36%), Gaps = 47/216 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG  +GIGK +AI  A  GA V +   +        +EI++        R         
Sbjct: 16  ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR--------- 66

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           DI+   + + +    A+ + G V +LVN AG        +M M 
Sbjct: 67  ---------------CDIT-SEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMPMA 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   +R     +LN++   H+++ +   M++ G G I+   S A
Sbjct: 110 D-------------------FRR--AYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMA 148

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           A      + +Y SSK A       +  ++ +  + +
Sbjct: 149 AENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  110 bits (278), Expect = 1e-27
 Identities = 57/242 (23%), Positives = 89/242 (36%), Gaps = 50/242 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIG+  A+  A+ GA V + AR+   L +  +EI         +          
Sbjct: 13  VTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA--------- 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
                           D+  D     + ++ A+ R G +    N AG +   G +  +++
Sbjct: 64  ---------------GDVG-DEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSV 107

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                    WR    +D NL       K  V  +   G G +  T+S 
Sbjct: 108 EG-------------------WR--ETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSF 146

Query: 282 AANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKP 339
             +  G  G+A Y +SK  L G  +AL +E+   G+ +  L  P  TDTP          
Sbjct: 147 VGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALL-PGGTDTPANFANLPGAA 205

Query: 340 RE 341
            E
Sbjct: 206 PE 207

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  109 bits (276), Expect = 1e-27
 Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 47/209 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGGSSG+GK +A   AK GA V I  R ++KL +A+ EI++                 +
Sbjct: 11  ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP--------------GQ 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D+  + ++I+  ++   ++ G + +L+N A        E++++ 
Sbjct: 57  ILT----------VQMDVR-NTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVN 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITASQ 281
                               W   +VI++ L GT + ++A+ +   ++  +G I+   + 
Sbjct: 106 G-------------------WN--SVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVAT 144

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYME 310
            A     G+    ++K  +    + L +E
Sbjct: 145 YAWDAGPGVIHSAAAKAGVLAMTKTLAVE 173

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  109 bits (276), Expect = 1e-27
 Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 49/218 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV--ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           VTGG+ GIG+ ++ + A  G  + +    + E++  +  + I+ A     F+        
Sbjct: 7   VTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVG------- 59

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                            LD++ D  N  SA+  A ++ G   +LVN AG+A    L E+T
Sbjct: 60  -----------------LDVT-DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVT 101

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITA 279
            +D                    +   +  +N++      +A      + G  G I+  A
Sbjct: 102 EED-------------------LKQ--IYSVNVFSVFFGIQAASRKFDELGVKGKIINAA 140

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
           S AA  G   L+AY+++KFA++G  +A   E+   G T
Sbjct: 141 SIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  108 bits (273), Expect = 3e-27
 Identities = 52/243 (21%), Positives = 91/243 (37%), Gaps = 50/243 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SGIG+ +A + A   + V  V   E +L Q  +E++        ++         
Sbjct: 12  VTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK--------- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
                           D+S   +++   ++   +    + +L N AG M     + E++ 
Sbjct: 63  ---------------ADVS-KKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSD 106

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +         W R             V+ +NLY   + ++A++  M ++G+G IV TAS 
Sbjct: 107 EL--------WER-------------VLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASI 145

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP---GFENEEKSK 338
           A   G +  A YT +K  L G   ++       G+     LP    T    G     +  
Sbjct: 146 AGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELG 205

Query: 339 PRE 341
            R 
Sbjct: 206 MRT 208

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  108 bits (272), Expect = 4e-27
 Identities = 49/230 (21%), Positives = 82/230 (35%), Gaps = 54/230 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SG+G  V       GA V     +E    Q   E+ +                  
Sbjct: 11  VTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS---------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +V  D+S    +    +     R G + +LVN AG+ L G +E   ++
Sbjct: 55  -----------MFVRHDVS-SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   +    ++ +N        +  +  MK+ G G I+  AS +
Sbjct: 103 D-------------------FS--RLLKINTESVFIGCQQGIAAMKETG-GSIINMASVS 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI---TLCLPPDTDTP 329
           + L I   A Y++SK A+     A  +  ++ G  I   ++  P    TP
Sbjct: 141 SWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH-PDGIYTP 189

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  108 bits (272), Expect = 4e-27
 Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 52/243 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ GIG  +A +  + GA V I  R      +A + +                   +
Sbjct: 11  ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---------------DQ 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      ++   D S D +             GPV  LVN AG+A+  ++EE T  
Sbjct: 56  I----------QFFQHDSS-DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTA 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG-CIVITASQ 281
           +                   WR   ++ +NL G    T+  ++ MK +G G  I+  +S 
Sbjct: 105 E-------------------WR--KLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI---TLCLPPDTDTPGFENEEKSK 338
              +G   L AY +SK A++  +++  ++       +   T+  P    TP  ++   ++
Sbjct: 144 EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVH-PGYIKTPLVDDLPGAE 202

Query: 339 PRE 341
              
Sbjct: 203 EAM 205

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  107 bits (270), Expect = 6e-27
 Identities = 46/246 (18%), Positives = 85/246 (34%), Gaps = 71/246 (28%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE-----Y 157
           VTGGS GIGK V     +   H  I    ++                  ++FI+      
Sbjct: 9   VTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAEN------------LKFIKADLTKQ 56

Query: 158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE 217
           ++I         +  I+ VS D                        +   AG+ + G++ 
Sbjct: 57  QDITNV------LDIIKNVSFDG-----------------------IFLNAGILIKGSIF 87

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
           ++ ++                     +   V+DLN++ +I+  K L   +K      IV 
Sbjct: 88  DIDIES-------------------IKK--VLDLNVWSSIYFIKGLENNLKVGAS--IVF 124

Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEK 336
             S    +      AYT SK A+    ++L +++ +  + + T+C P   DT  + N  +
Sbjct: 125 NGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVC-PGTVDTDLYRNLIQ 183

Query: 337 SKPRET 342
                 
Sbjct: 184 KYANNV 189

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  107 bits (270), Expect = 7e-27
 Identities = 54/230 (23%), Positives = 86/230 (37%), Gaps = 56/230 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A   A+ GA++ +    +     A  EI +                  
Sbjct: 9   VTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVK-------------- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +   D+S D   I +    A    G V +LVN AG+     +E+  ++
Sbjct: 53  ----------AVHHPADLS-DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLE 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W    +I LNL    H T+  + GM+ R  G I+  AS  
Sbjct: 102 S-------------------WDK--IIALNLSAVFHGTRLALPGMRARNWGRIINIASVH 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGF 331
             +G  G AAY ++K  + G  + + +E   S +T   +C       PG+
Sbjct: 141 GLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAIC-------PGW 183

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  107 bits (270), Expect = 8e-27
 Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 53/250 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSG G  +A     RG  V  +    + L +       A  +             K
Sbjct: 7   VTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYAD-------------K 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA---LCGTLEEM 219
                        V  D++ D  ++ +A+   M++ G + +LVN AG+      G L   
Sbjct: 54  V----------LRVRADVA-DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTT 102

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
            ++         + +             V+ +N+ G     +A++  M  +G G IV  A
Sbjct: 103 PVEQ--------FDK-------------VMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIA 141

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP---GFENEE 335
           S A+ +   G +AYT+SK A+    +++ ++   SG+    +C P   +TP      ++ 
Sbjct: 142 SVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVC-PGMIETPMTQWRLDQP 200

Query: 336 KSKPRETSLI 345
           + + +  + I
Sbjct: 201 ELRDQVLARI 210

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  107 bits (269), Expect = 1e-26
 Identities = 48/215 (22%), Positives = 81/215 (37%), Gaps = 48/215 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG++GIG+ +A   A  GA + I         +A+  I+        ++         
Sbjct: 12  ITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVK--------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+S    ++ +  +  +   G   +LVN AG+      +E+T +
Sbjct: 61  ---------------CDVS-QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W+     ++N+     M KA V GMK+ G G I+   S  
Sbjct: 105 Q-------------------WKK--TFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT 143

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
             L I     Y S+K A  GF  AL  ++ + G+T
Sbjct: 144 YWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 178

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  107 bits (270), Expect = 1e-26
 Identities = 41/212 (19%), Positives = 75/212 (35%), Gaps = 50/212 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  VA   A+ GA V I         +A+   K    + K  +         
Sbjct: 39  VTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC-------- 90

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMT 220
                           +IS D +++   +       G + + V  AG+       ++   
Sbjct: 91  ----------------NIS-DPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDN 133

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
                                 W    +I ++L G  + +  + +  K+ G+G ++IT+S
Sbjct: 134 YDS-------------------WNK--IISVDLNGVYYCSHNIGKIFKKNGKGSLIITSS 172

Query: 281 QAANLGIYGL--AAYTSSKFALKGFAEALYME 310
            +  +       A Y ++K A    A++L +E
Sbjct: 173 ISGKIVNIPQLQAPYNTAKAACTHLAKSLAIE 204

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  106 bits (268), Expect = 1e-26
 Identities = 47/227 (20%), Positives = 83/227 (36%), Gaps = 56/227 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG   A+   + GA VT   +   +                            
Sbjct: 12  VTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYP------------------------ 47

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          +D++ D   +    Q  +     +  LVN AG+   G  ++++ +
Sbjct: 48  ----------FATEVMDVA-DAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKE 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   W+      +N+ G  ++ +  +   +++  G IV  AS A
Sbjct: 97  D-------------------WQQ--TFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDA 135

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
           A+    G++AY +SK ALK  A ++ +E+  SG+   +  P  TDT 
Sbjct: 136 AHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTD 182

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  107 bits (269), Expect = 2e-26
 Identities = 49/232 (21%), Positives = 79/232 (34%), Gaps = 55/232 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI-KKACPNPKFIRFIEYEEIK 161
           +TG +SGIG   A      GA V I  R +  L  A  EI   A                
Sbjct: 34  ITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGA---------------- 77

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         +  D + +   +    +      G + +L   AG      L E+T 
Sbjct: 78  ------------VGIQADSA-NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTE 124

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                    +      D N+ G +   +  +  + +     +V+T S 
Sbjct: 125 EQ-------------------YD--DTFDRNVKGVLFTVQKALPLLARGSS--VVLTGST 161

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFE 332
           A + G    + Y +SK AL+ FA    +++K  G+ I TL  P  T+T G  
Sbjct: 162 AGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLS-PGPTETTGLV 212

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  106 bits (267), Expect = 2e-26
 Identities = 53/227 (23%), Positives = 82/227 (36%), Gaps = 61/227 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V   S GIG+ VA   ++ GA VTI AR+E+ L ++                        
Sbjct: 24  VLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVC----------------- 66

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+ KD + +        ++   V +LV  AG    G  +E+T +
Sbjct: 67  ----------------DLRKDLDLL-------FEKVKEVDILVLNAGGPKAGFFDELTNE 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        +                ID      I + +  +  MK++G G IV   S +
Sbjct: 104 D--------FKE-------------AIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
               I  L    S++ AL GF + L  EV   G+T+    P  T+T 
Sbjct: 143 VISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETE 189

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  106 bits (267), Expect = 2e-26
 Identities = 53/259 (20%), Positives = 98/259 (37%), Gaps = 55/259 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG +SGIG  +A   A +GA + +    D  ++ + +  +                   
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ---------------- 52

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                      + Y   D+S   E +R  +  A+ + G + +LVN AG+     +E+   
Sbjct: 53  -------HGVKVLYDGADLS-KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT 104

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                    W +  ++ LNL    H T A +  MK++G G I+  AS 
Sbjct: 105 EK-------------------WDA--ILALNLSAVFHGTAAALPHMKKQGFGRIINIASA 143

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKPR 340
              +     +AY ++K  + GF +   +E    G+T   +C P    TP  E +  +   
Sbjct: 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAIC-PGWVRTPLVEKQISALAE 202

Query: 341 ETSLISQTGGLYRPEVVKQ 359
           +        G+ +    ++
Sbjct: 203 KN-------GVDQETAARE 214

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  106 bits (266), Expect = 3e-26
 Identities = 46/231 (19%), Positives = 79/231 (34%), Gaps = 53/231 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI-KKACPNPKFIRFIEYEEIK 161
           V GG+ G+G        + GA V +  R+E  + + +EE   +                 
Sbjct: 13  VIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRV---------------- 56

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         +  DI+ D   I      A    G + +L   AG++     ++++ 
Sbjct: 57  ------------HALRSDIA-DLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSE 103

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                +       +N  G     + L   +++ G   IV T+S 
Sbjct: 104 AS-------------------YDR--QFAVNTKGAFFTVQRLTPLIREGGS--IVFTSSV 140

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
           A   G  G++ Y++SK AL  FA  L  E+   G+ +    P   DTP   
Sbjct: 141 ADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKG 191

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  106 bits (266), Expect = 4e-26
 Identities = 43/216 (19%), Positives = 71/216 (32%), Gaps = 47/216 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG  +  E A  GA +   AR+E +L +   + +K                  
Sbjct: 19  VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-------------- 64

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCG-PVYMLVNCAGMALCGTLEEMTM 221
                     +     D S         +Q      G  + +L+N  G        + T 
Sbjct: 65  ----------VTGSVCDAS-LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTA 113

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                   +     I  NL    H+++     +K  G G I+  +S 
Sbjct: 114 ED-------------------FSF--HISTNLESAYHLSQLAHPLLKASGCGNIIFMSSI 152

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
           A  +     + Y+++K AL   A  L  E    G+ 
Sbjct: 153 AGVVSASVGSIYSATKGALNQLARNLACEWASDGIR 188

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  106 bits (266), Expect = 5e-26
 Identities = 41/242 (16%), Positives = 79/242 (32%), Gaps = 53/242 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG   GIG   +   A+ GA V +    E  L  A   + +                  
Sbjct: 16  ITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGA---------------- 59

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT--LEEMT 220
                       +  +D++ +  ++R+ +   +D  G + ++ N A  +      + +MT
Sbjct: 60  -----------VHHVVDLT-NEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMT 107

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
           +          W                  +N  GT+ M K  +  +   G G IV  +S
Sbjct: 108 VDV--------WDD-------------TFTVNARGTMLMCKYAIPRLISAGGGAIVNISS 146

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKP 339
             A+       AY  +K A++     +  +  + G+    +  P    TP  E       
Sbjct: 147 ATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIA-PGLVRTPRLEVGLPQPI 205

Query: 340 RE 341
            +
Sbjct: 206 VD 207

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  104 bits (262), Expect = 1e-25
 Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 48/217 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSGIG  VA   A RG  V   ARD K +  A + ++                   
Sbjct: 29  VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR--------------AAGHD 74

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      +  S D++   + + +A+  A++R GP+ +LVN AG    G   ++   
Sbjct: 75  V----------DGSSCDVT-STDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDA 123

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALV--EGMKQRGRGCIVITAS 280
                               W    V+D NL G   +T+ ++   GM++ G G IV  AS
Sbjct: 124 L-------------------WAD--VLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIAS 162

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
                G+   A YT+SK  + GF +++  E+ ++G+T
Sbjct: 163 TGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGIT 199

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  103 bits (260), Expect = 2e-25
 Identities = 41/230 (17%), Positives = 66/230 (28%), Gaps = 63/230 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V GGS  +G  V      +  +   +   E                              
Sbjct: 27  VLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH------------------------ 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-LEEMTM 221
                         ++  S   E I+S ++    +   V   V  AG    G    +  +
Sbjct: 63  ------------SFTIKDS-GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFL 109

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                     +   +ID+NLY          + + Q G    V+T + 
Sbjct: 110 KS-------------------VKG--MIDMNLYSAFASAHIGAKLLNQGGL--FVLTGAS 146

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQ--SGLTITLCLPPDTDTP 329
           AA     G+ AY ++K A     + L  E     +G T    LP   DTP
Sbjct: 147 AALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP 196

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  104 bits (261), Expect = 2e-25
 Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 56/245 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG  SG G+ +A   AK GA V IV RD+    +   EI  A                 
Sbjct: 14  ITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAA---------------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTM 221
                        V+ DIS    ++ +A++ A+ + G V +LVN AG+       E +  
Sbjct: 58  -----------LAVAADIS-KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEP 105

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG----CIVI 277
           ++        + R             ++ +N+ G   MT  L+   K+ G       I+ 
Sbjct: 106 EE--------FDR-------------IVGVNVRGVYLMTSKLIPHFKENGAKGQECVILN 144

Query: 278 TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEK 336
            AS  A      LA Y ++K  +    +AL +E+  + + +  L  P   +TP       
Sbjct: 145 VASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALN-PVAGETPLLTTFMG 203

Query: 337 SKPRE 341
               E
Sbjct: 204 EDSEE 208

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  104 bits (261), Expect = 2e-25
 Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 48/218 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           +TG S+G+GK +AI  A   A V +     E +     EEIKK                 
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG--------------G 57

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           +A            V  D++    ++ + +Q A+   G + +++N AG+    +  EM++
Sbjct: 58  EA----------IAVKGDVT-VESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSL 106

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITAS 280
            D                   W    VID NL G    ++  ++   +   +G ++  +S
Sbjct: 107 SD-------------------WNK--VIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
               +       Y +SK  +K   E L +E    G+ +
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  103 bits (260), Expect = 2e-25
 Identities = 47/237 (19%), Positives = 86/237 (36%), Gaps = 52/237 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG ++GIG+ +A   AK GA V +     +        I++A      +          
Sbjct: 17  VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE--------- 67

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           +++ D ++  + ++ A+D+ G + +LVN AG        +M M 
Sbjct: 68  ---------------CNVT-DEQHREAVIKAALDQFGKITVLVNNAGGGG-PKPFDMPMS 110

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   +       LNL+    +++     M++ G G I+  +S A
Sbjct: 111 D-------------------FEW--AFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMA 149

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP---DTD-TPGFENEE 335
                  +A+Y SSK A+      +  +V   G+ +   + P    TD        E
Sbjct: 150 GENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN-AIAPGAIKTDALATVLTPE 205

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  102 bits (258), Expect = 3e-25
 Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 57/218 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG+ +A     RG  V I +R+ ++  Q+   +                    
Sbjct: 7   VTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPT---------------- 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+ K  ++ +  ++ A++  G +++LV+ A + +     E++ +
Sbjct: 51  ----------------DLEK--DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYE 92

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   V+ L+L     + +A    M + G G ++   S  
Sbjct: 93  E-------------------WR--RVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVT 131

Query: 283 A--NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
                G   + AYT++K AL G   AL  E  + G+ +
Sbjct: 132 TFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRV 169

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  103 bits (259), Expect = 3e-25
 Identities = 40/218 (18%), Positives = 79/218 (36%), Gaps = 47/218 (21%)

Query: 103 VTGGS-SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VT  + +GIG   A  A   GA V I    E++L + ++++                   
Sbjct: 27  VTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG------------- 73

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           +           E V  D++   E + + +   +++ G + +LVN AG+     + +MT 
Sbjct: 74  RV----------EAVVCDVT-STEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTD 122

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITAS 280
           ++                   W    V+++ L   +  T+A +         G IV  AS
Sbjct: 123 EE-------------------WDR--VLNVTLTSVMRATRAALRYFRGVDHGGVIVNNAS 161

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
                  +  + Y ++K  +        +E  + G+ I
Sbjct: 162 VLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRI 199

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  103 bits (260), Expect = 3e-25
 Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 50/216 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ GIG+  A    + GA V I    +    +    I                    
Sbjct: 21  ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----------------- 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM--ALCGTLEEMT 220
                     I +V  D++KD E++R+ +   + + G + ++    G+      ++ E  
Sbjct: 64  --------DVISFVHCDVTKD-EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAG 114

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
            +D        + R             V+D+N+YG   + K     M    +G IV TAS
Sbjct: 115 NED--------FKR-------------VMDINVYGAFLVAKHAARVMIPAKKGSIVFTAS 153

Query: 281 QAANLGIYGLA-AYTSSKFALKGFAEALYMEVKQSG 315
            ++     G++  YT++K A+ G   +L  E+ + G
Sbjct: 154 ISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYG 189

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  102 bits (257), Expect = 4e-25
 Identities = 41/219 (18%), Positives = 74/219 (33%), Gaps = 52/219 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+  A   A+ GA V +   + +      ++I         +          
Sbjct: 14  VTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVA--------- 64

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC---GTLEEM 219
                          +D+S D E+ ++     +   G +  LVN A +        L  +
Sbjct: 65  ---------------VDVS-DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTI 108

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
             +                    ++    + +NL G +  T+A+ + M +RG G IV  +
Sbjct: 109 DPEY-------------------YKK--FMSVNLDGALWCTRAVYKKMTKRGGGAIVNQS 147

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           S A          Y  +K  + G  + L  E+    + I
Sbjct: 148 STA---AWLYSNYYGLAKVGINGLTQQLSRELGGRNIRI 183

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  103 bits (259), Expect = 4e-25
 Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 38/230 (16%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE-YEEIK 161
           +TG + G G+  A+  A  GA +  +A D    +  +                E    ++
Sbjct: 16  ITGAARGQGRAHAVRMAAEGADI--IAVD----IAGKLPSCVPYDPASPDDLSETVRLVE 69

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
            A       R I    +D   D++ +R  +   +   G + ++V  AG+A     +++T 
Sbjct: 70  AAN------RRIVAAVVDTR-DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITP 122

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITAS 280
           +D                   +R   V+D+N+ GT +   A    + + GR G I++ +S
Sbjct: 123 ED-------------------FR--DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS 161

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
            A       +  YT+SK A+ G A A   E+ +  + + ++  P   +TP
Sbjct: 162 AAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVH-PGPVNTP 210

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  103 bits (258), Expect = 5e-25
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 53/223 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG       A  GA+V ++ R     ++  E++ K                 K
Sbjct: 19  VTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-------------VK 65

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      +    D+S + + +   +Q      GP+  L+  AG+++     E+T +
Sbjct: 66  T----------KAYQCDVS-NTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHE 114

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITAS- 280
           D                   +    V D+N++G  +  +A+ +   Q+ + G IV+T+S 
Sbjct: 115 D-------------------FAF--VYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM 153

Query: 281 ------QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
                 Q++  G      Y SSK A     + L  E   +G+ 
Sbjct: 154 SSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIR 196

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  103 bits (259), Expect = 5e-25
 Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 45/208 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+SG+G+ +       GA V ++ +  ++L + +                       
Sbjct: 10  ITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNA---------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+    ++ + A +  +   G +  L+  AG+    T      +
Sbjct: 54  -----------VGVVGDVR-SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPE 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                 A +    +  +N+ G IH  KA +  +     G +V T S A
Sbjct: 102 D--------------KIDAAFD--DIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNA 144

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYME 310
                 G   YT++K A+ G    +  E
Sbjct: 145 GFYPNGGGPLYTATKHAVVGLVRQMAFE 172

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  102 bits (257), Expect = 5e-25
 Identities = 54/207 (26%), Positives = 76/207 (36%), Gaps = 51/207 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG SSG+G  V    A+ GA V  +        +   E+  A                 
Sbjct: 12  VTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAV---------------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       + + D++ +  +  +AL  A    G V+ LVNCAG A    +   +  
Sbjct: 56  -----------RFRNADVT-NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRS-- 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIV 276
                       G H  L  +     + +NL GT +M +   E M Q        RG IV
Sbjct: 102 ------------GPHA-LDSFAR--TVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIV 146

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGF 303
            TAS AA  G  G AAY +SK  +   
Sbjct: 147 NTASIAAFDGQIGQAAYAASKGGVAAL 173

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  101 bits (255), Expect = 1e-24
 Identities = 45/218 (20%), Positives = 74/218 (33%), Gaps = 57/218 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S GIG  +      R   V   +R  K                             
Sbjct: 33  ITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD----------------------- 69

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I  V+ DIS   E     ++  ++R G +  LVN AG+ L     EMT +
Sbjct: 70  ----------IHTVAGDIS-KPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQE 118

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   +     + +N+ G  H+T+     M ++G G IV   +  
Sbjct: 119 D-------------------YDH--NLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSL 157

Query: 283 ANLGIYGLA--AYTSSKFALKGFAEALYMEVKQSGLTI 318
            +  + G+     + +K  L     +L ME  +SG+ +
Sbjct: 158 VDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRV 195

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  101 bits (255), Expect = 1e-24
 Identities = 45/233 (19%), Positives = 85/233 (36%), Gaps = 59/233 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG+  A     +GA V +V  + +  +Q +  + +     K +          
Sbjct: 12  VTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL---------- 61

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       ++  D++ D + +R   +  +D  G + +LVN AG+            
Sbjct: 62  ------------FIQCDVA-DQQQLRDTFRKVVDHFGRLDILVNNAGV------------ 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG---CIVITA 279
                               W     + +NL   I  T   ++ M ++  G    I+  +
Sbjct: 97  ---------------NNEKNWEK--TLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 139

Query: 280 SQAANLGIYGLAAYTSSKFALKGF--AEALYMEVKQSGLTI-TLCLPPDTDTP 329
           S A  + +     Y +SK  + GF  + AL   +  SG+ +  +C P   +T 
Sbjct: 140 SLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAIC-PGFVNTA 191

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  101 bits (254), Expect = 1e-24
 Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 49/207 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+SG+G   A     +GA   ++           +++   C                
Sbjct: 17  ITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNC---------------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +   D++   +++++AL  A  + G V + VNCAG+A+        ++
Sbjct: 61  -----------VFAPADVT-SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKT--YNLK 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIV 276
             +              L  ++   V+D+NL GT ++ + +   M Q        RG I+
Sbjct: 107 KGQTHT-----------LEDFQR--VLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVII 153

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGF 303
            TAS AA  G  G AAY++SK  + G 
Sbjct: 154 NTASVAAFEGQVGQAAYSASKGGIVGM 180

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  101 bits (254), Expect = 2e-24
 Identities = 39/207 (18%), Positives = 72/207 (34%), Gaps = 50/207 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V+GG+ G+G+         G  V I     +K     +E+                    
Sbjct: 35  VSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRA---------------- 78

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      E+VS +++   +++ +A++ A       Y +V   G             
Sbjct: 79  -----------EFVSTNVT-SEDSVLAAIEAANQLGRLRYAVVAHGG------------- 113

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIV 276
              V ++ +   G    +  +     IDL L GT ++ + +   +          RG +V
Sbjct: 114 -FGVAQRIVQRDGSPADMGGFTK--TIDLYLNGTYNVARLVAASIAAAEPRENGERGALV 170

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGF 303
           +TAS A   G  G  AY ++K  + G 
Sbjct: 171 LTASIAGYEGQIGQTAYAAAKAGVIGL 197

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  100 bits (251), Expect = 2e-24
 Identities = 32/230 (13%), Positives = 64/230 (27%), Gaps = 59/230 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V GG   +G         R   V  +   E +   A   +K                   
Sbjct: 12  VYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMT----------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
                           D   +  +  +A    +     V  ++  AG  A      +   
Sbjct: 55  ----------------DSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLF 98

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           ++                        +   +++ +   +    + +K+ G   + +  ++
Sbjct: 99  KN-------------------CD--LMWKQSIWTSTISSHLATKHLKEGGL--LTLAGAK 135

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQ--SGLTITLCLPPDTDTP 329
           AA  G  G+  Y  +K A+    ++L  +     SG      LP   DTP
Sbjct: 136 AALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 185

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  100 bits (252), Expect = 4e-24
 Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 36/242 (14%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + G G+  A+  A  GA +                +  A  +P+     + +E  +
Sbjct: 20  ITGAARGQGRSHAVRLAAEGADIIACDICA----PVSASVTYAPASPE-----DLDETAR 70

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                   R      LD+  D   +R  +   M++ G + ++V  AG+   G + E+T +
Sbjct: 71  LVE--DQGRKALTRVLDVR-DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDE 127

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                               W   TVI +NL GT    +A V  M + G  G IV+ +S 
Sbjct: 128 Q-------------------WD--TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS 166

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKPR 340
           A      G   Y++SK  L      L +E+ + G+ + ++  P   +TP  E E   +  
Sbjct: 167 AGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIH-PYSVETPMIEPEAMMEIF 225

Query: 341 ET 342
             
Sbjct: 226 AR 227

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 99.6 bits (249), Expect = 6e-24
 Identities = 50/232 (21%), Positives = 79/232 (34%), Gaps = 51/232 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A++  K GA V I  R    L    +E +                  +
Sbjct: 10  VTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG--------------GQ 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSAL-QPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
             P          V  D S     +RS   Q   ++ G + +LVN A     G    +  
Sbjct: 56  CVP----------VVCDSS-QESEVRSLFEQVDREQQGRLDVLVNNAYA---GVQTILNT 101

Query: 222 QDIKVMEQPL--WLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           ++    E P   W               + ++ L G    +      M   G+G IV+ +
Sbjct: 102 RNKAFWETPASMWDD-------------INNVGLRGHYFCSVYGARLMVPAGQGLIVVIS 148

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
           S  + L       Y   K A    A     E+++ G++  + L      PG 
Sbjct: 149 SPGS-LQYMFNVPYGVGKAACDKLAADCAHELRRHGVSC-VSL-----WPGI 193

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 99.6 bits (249), Expect = 6e-24
 Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 53/216 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VT      G   A+  ++ G  V       K+  + +   +                   
Sbjct: 6   VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY----------------- 48

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTM 221
                          L      +     ++      G V +LV+    A     +++  +
Sbjct: 49  -------------PQLKPM-SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAV 94

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                   +R    ++        +  A+   MK+R  G I+   S 
Sbjct: 95  ED-------------------YRG--AVEALQIRPFALVNAVASQMKKRKSGHIIFITSA 133

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
                   L+ YTS++      A AL  E+ +  + 
Sbjct: 134 TPFGPWKELSTYTSARAGACTLANALSKELGEYNIP 169

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 98.8 bits (247), Expect = 1e-23
 Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 48/218 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG+ +A   A+ GA+V +  R    +     ++ +                 K
Sbjct: 15  VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG-------------K 61

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+S D     +    A++  G + ++   AG+     L  MT +
Sbjct: 62  V----------IGVQTDVS-DRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPE 110

Query: 223 DIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                     +  +N+ GT +  +A ++ +   G G +V+T+S 
Sbjct: 111 Q----------------------LNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSI 148

Query: 282 AANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
              + G  G + Y ++K A  GF     +E+    +T+
Sbjct: 149 TGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITV 186

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 99.2 bits (248), Expect = 2e-23
 Identities = 59/272 (21%), Positives = 99/272 (36%), Gaps = 34/272 (12%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + G G+  A+  A+ GA +  +A D    +                   +  E   
Sbjct: 16  VTGAARGQGRSHAVRLAQEGADI--IAVD----ICKPIRAGVVDTAIPASTPEDLAETAD 69

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
                   R I    +D+  DY+ +++A+   +++ G + ++V  AG      TL++ + 
Sbjct: 70  LVK--GHNRRIVTAEVDVR-DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITAS 280
           +D                   W    +ID+NL G     KA V  M   GR G I++T+S
Sbjct: 127 ED-------------------WT--EMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS 165

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKP 339
                       Y ++K  + G   A  +E+ Q  + + ++  P    TP   NE   K 
Sbjct: 166 VGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVH-PTHVKTPMLHNEGTFKM 224

Query: 340 RETSLISQTGGLYRPEVVKQSGLTITLCLPPD 371
               L +       P       L I    P D
Sbjct: 225 FRPDLENPGPDDMAPICQMFHTLPIPWVEPID 256

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 96.6 bits (241), Expect = 2e-23
 Identities = 34/227 (14%), Positives = 67/227 (29%), Gaps = 71/227 (31%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           + G S  +G  V  E  ++ A V    R                                
Sbjct: 8   LIGASGTLGSAVK-ERLEKKAEVITAGRHS------------------------------ 36

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V++DI+        +++   ++ G V  +V+  G A    L E+T +
Sbjct: 37  -----------GDVTVDITN-----IDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPE 80

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                                     I   L G I++    ++ +  +G     +T    
Sbjct: 81  K-------------------NA--VTISSKLGGQINLVLLGIDSLNDKGS--FTLTTGIM 117

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
               I   A+   +  A+  FA++  +E+ + G+ I    P   +  
Sbjct: 118 MEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSPNVLEES 163

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 98.4 bits (246), Expect = 2e-23
 Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 52/215 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG+      A+ GA +  V R+E+ L +A   ++                   
Sbjct: 11  VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA---------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+S D + + +    A++  G ++ + + AG+A       + ++
Sbjct: 55  -----------IAVVADVS-DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W    V+ +NL G+  + +   E +++ G   +V+T S A
Sbjct: 103 A-------------------WEK--VLRVNLTGSFLVARKAGEVLEEGGS--LVLTGSVA 139

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
             LG +GLA Y + K  + G A  L +E+ + G+ 
Sbjct: 140 G-LGAFGLAHYAAGKLGVVGLARTLALELARKGVR 173

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 97.3 bits (243), Expect = 5e-23
 Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 48/217 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A                 
Sbjct: 27  VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT--------- 77

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+      I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 78  ---------------CDVR-SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 121

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALV--EGMKQRGRGCIVITAS 280
                               W    V++ NL G   +TK ++   GM +RG G IV  AS
Sbjct: 122 L-------------------WLD--VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS 160

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
                G+   A Y++SK  + GF +AL +E+ ++G+T
Sbjct: 161 TGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 95.7 bits (239), Expect = 1e-22
 Identities = 43/217 (19%), Positives = 75/217 (34%), Gaps = 47/217 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S G+GK  AI  A+ G ++ I  AR +K  L+  EEI+K                 
Sbjct: 9   VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG--------------V 54

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           K             V  ++      I+   Q   +  G + + VN A   +   + E+  
Sbjct: 55  KVLV----------VKANVG-QPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEE 103

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                W     +++N    +   +   + M++ G G IV  +S 
Sbjct: 104 TH-------------------WDW--TMNINAKALLFCAQEAAKLMEKNGGGHIVSISSL 142

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            +   +        SK AL+     L +E+    + +
Sbjct: 143 GSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 95.7 bits (239), Expect = 2e-22
 Identities = 51/212 (24%), Positives = 78/212 (36%), Gaps = 51/212 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           V G    IG+  AI  A+ GA+V +      +    A  EI+K                +
Sbjct: 13  VAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--------------R 58

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMT 220
            A            +  D++ +   + +A+  A D+ G ++ LV+ AG +    T+ EM 
Sbjct: 59  SALA----------IKADLT-NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMD 107

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
                                 W    V+D+NL       K  +  M + G   IV  +S
Sbjct: 108 EAF-------------------WH--QVLDVNLTSLFLTAKTALPKMAKGGA--IVTFSS 144

Query: 281 QAANLG-IYGLAAYTSSKFALKGFAEALYMEV 311
           QA   G   G  AY +SK A+  F   L  EV
Sbjct: 145 QAGRDGGGPGALAYATSKGAVMTFTRGLAKEV 176

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 95.3 bits (238), Expect = 2e-22
 Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 50/216 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIGK +A   A  GA V +   + +    A   I K                  
Sbjct: 11  VTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA---------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        ++ DIS D  ++++         G + +LVN A +      +++ + 
Sbjct: 55  -----------RAIAADIS-DPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLD 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                               WR   +ID+NL GT  +T+A  + M+  G+ G ++  AS 
Sbjct: 103 H-------------------WRK--IIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASN 141

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
               G   +AAY ++K  + GF  AL  E+ +  +T
Sbjct: 142 TFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNIT 177

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 95.7 bits (239), Expect = 2e-22
 Identities = 42/210 (20%), Positives = 61/210 (29%), Gaps = 52/210 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG+ +A    + GA V I ARD +        +                    
Sbjct: 34  VTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY----------------- 76

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D+S      R   Q   +    + +LVN AG +    LE   + 
Sbjct: 77  ----GDCQ----AIPADLS-SEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVS 127

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKA----LVEGMKQRGRGCIVIT 278
                               W    V+ LN+       +     L           ++  
Sbjct: 128 G-------------------WEK--VMQLNVTSVFSCIQQLLPLLRRSASAENPARVINI 166

Query: 279 ASQAANLGIYGLA-AYTSSKFALKGFAEAL 307
            S A    +   A AY  SK AL   +  L
Sbjct: 167 GSVAGISAMGEQAYAYGPSKAALHQLSRML 196

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 95.8 bits (239), Expect = 3e-22
 Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 48/218 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG+ +A   A+ GA+V + AR  ++L     E+ +                  
Sbjct: 46  VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----------------- 88

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  V LD+S D  +   A +  +D  G + ++   AG+     L+ MT +
Sbjct: 89  ------GAGNVIGVRLDVS-DPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPE 141

Query: 223 DIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                     V+D+N+ GT++  +A +  +   GRG +++T+S 
Sbjct: 142 Q----------------------LSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSI 179

Query: 282 AANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
              + G  G + Y +SK A  GF     +E+   G+T+
Sbjct: 180 TGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTV 217

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 94.5 bits (236), Expect = 3e-22
 Identities = 36/224 (16%), Positives = 70/224 (31%), Gaps = 54/224 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA-QEEIKKACPNPKFIRFIEYEEIK 161
           +TG S GIG   A   A+ GA V +  R     +      ++    +  F          
Sbjct: 12  ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA-------- 63

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMT 220
                            D++   E  +  +   + + G + +L+N AG  +    L E+ 
Sbjct: 64  ----------------ADLA-TSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEID 106

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-----GCI 275
                                 + +  V+D N+   +  TK  +  +    +       +
Sbjct: 107 DTF-------------------YDA--VMDANIRSVVMTTKFALPHLAAAAKASGQTSAV 145

Query: 276 VITASQAANLG-IYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
           + T S A + G   G   Y ++K  L    +       + G+  
Sbjct: 146 ISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRF 189

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 93.7 bits (234), Expect = 5e-22
 Identities = 17/216 (7%), Positives = 45/216 (20%), Gaps = 49/216 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VT      G        + G  V           + Q                       
Sbjct: 6   VTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE-------------------- 45

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      E          +     +   +     +  +V+   +        +   
Sbjct: 46  ----------SENPGTIAL-AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGT 94

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                             A  R   + +      I + ++ +  ++  G   ++   S  
Sbjct: 95  S----------------EADIRQ--MFEALSIFPILLLQSAIAPLRAAGGASVIFITSSV 136

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
               +     Y  ++ A     E+    + + G+ +
Sbjct: 137 GKKPLAYNPLYGPARAATVALVESAAKTLSRDGILL 172

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 94.1 bits (235), Expect = 6e-22
 Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 50/213 (23%)

Query: 103 VTG--GSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           VTG  G  G+G   A   A+ GA V I  A   +   +  +E++K               
Sbjct: 25  VTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG------------ 72

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
             KA          +     +   YE+    ++  +   G +   +  AG      + + 
Sbjct: 73  -IKA----------KAYKCQVD-SYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG 120

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           +++                    W    V+ ++L GT H  KA+    K+RG G +VITA
Sbjct: 121 SVEA-------------------WNH--VVQVDLNGTFHCAKAVGHHFKERGTGSLVITA 159

Query: 280 SQAANLGIY--GLAAYTSSKFALKGFAEALYME 310
           S + ++  +     +Y  +K      A +L  E
Sbjct: 160 SMSGHIANFPQEQTSYNVAKAGCIHMARSLANE 192

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 93.1 bits (232), Expect = 7e-22
 Identities = 27/230 (11%), Positives = 55/230 (23%), Gaps = 59/230 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V GG   +G  +     K G  V  +         +   +                    
Sbjct: 8   VYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD------------------- 48

Query: 163 ACPNPKFIRFIEYVSLDIS-KDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                           + +  + E        +  +   V  +   AG    G+      
Sbjct: 49  ---------------GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDF 93

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                     +I  +++ +    K     +K  G   + +T + 
Sbjct: 94  VK-------NADL-------------MIKQSVWSSAIAAKLATTHLKPGGL--LQLTGAA 131

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQS--GLTITLCLPPDTDTP 329
           AA      +  Y  +K A+     +L  +         +   +P   DTP
Sbjct: 132 AAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 181

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 94.2 bits (235), Expect = 1e-21
 Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 38/249 (15%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + G G+  AI  A+ GA +  +A D   + +  + +K     P      +  E  +
Sbjct: 33  ITGAARGQGRSHAITLAREGADI--IAID---VCKQLDGVKLPMSTPD-----DLAETVR 82

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMTM 221
                   R I    +D+  D++ +++A+   + + G + +++  A   +    L  M  
Sbjct: 83  QVE--ALGRRIIASQVDVR-DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDP 139

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITAS 280
           +                    WR   +ID+NL G     +  +  +    R G IV T+S
Sbjct: 140 KT-------------------WR--DMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS 178

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFENEEKSKP 339
                G   +  Y +SK  L G    + +E+    + +  +C P    TP   NE   + 
Sbjct: 179 IGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVC-PSSVATPMLLNEPTYRM 237

Query: 340 RETSLISQT 348
               L + T
Sbjct: 238 FRPDLENPT 246

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 93.0 bits (232), Expect = 1e-21
 Identities = 29/236 (12%), Positives = 65/236 (27%), Gaps = 52/236 (22%)

Query: 76  RGVRTVASREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL 135
                 +S   +L  + ++  ++  + +TG S  +G H A+   + G  V I  R E   
Sbjct: 5   HHHHHHSSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH-- 62

Query: 136 LQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAM 195
             +  E+++A                 A            +  D S     I + +    
Sbjct: 63  -ASVTELRQA----------------GA----------VALYGDFS-CETGIMAFIDLLK 94

Query: 196 DRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG 255
            +   +  +V+ A   L          +                   +    +  +++  
Sbjct: 95  TQTSSLRAVVHNASEWL-AETPGEEADN-------------------FTR--MFSVHMLA 132

Query: 256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
              +       +       IV  +      G     AY ++K  L+    +     
Sbjct: 133 PYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARF 188

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 43/272 (15%), Positives = 81/272 (29%), Gaps = 53/272 (19%)

Query: 81  VASREPHLQMKRYLAPTNGTLS-----VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKK 134
           + S   H      L P    +      VTG +  IG+ +A++  + G  V I      + 
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEA 60

Query: 135 LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPA 194
            +   +E+ K   N              A               D++ +   + ++ +  
Sbjct: 61  AVSLADELNKERSN-------------TA----------VVCQADLT-NSNVLPASCEEI 96

Query: 195 MDRC----GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID 250
           ++ C    G   +LVN A       L +   +D    +         T         +I 
Sbjct: 97  INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK---------TVETQVAE--LIG 145

Query: 251 LNLYGTIHMTKALVEGM-------KQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGF 303
            N      +T +  +                IV       +      + Y   K AL G 
Sbjct: 146 TNAIAPFLLTMSFAQRQKGTNPNCTSSN-LSIVNLCDAMVDQPCMAFSLYNMGKHALVGL 204

Query: 304 AEALYMEVKQSGLTITLCLPPDTDTPGFENEE 335
            ++  +E+   G+ +    P  +  P    EE
Sbjct: 205 TQSAALELAPYGIRVNGVAPGVSLLPVAMGEE 236

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 91.4 bits (228), Expect = 5e-21
 Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 52/249 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI---VARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           + GG   +G   A   A    ++ +    A+D     + ++E++         +      
Sbjct: 16  IAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQS----- 70

Query: 160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM 219
                              D+S + E +      A    G V + +N  G  L   + E 
Sbjct: 71  -------------------DLS-NEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVET 110

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
           +  +                   + +  +  +N        K   + M   G   I+  A
Sbjct: 111 SEAE-------------------FDA--MDTINNKVAYFFIKQAAKHMNPNGH--IITIA 147

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
           +          + Y  +K  ++ +  A   E+ +  +++    P   DT  F   +++K 
Sbjct: 148 TSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYG-QETKE 206

Query: 340 RETSLISQT 348
                 SQ 
Sbjct: 207 STAFHKSQA 215

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 92.0 bits (229), Expect = 5e-21
 Identities = 33/242 (13%), Positives = 61/242 (25%), Gaps = 25/242 (10%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG +  +G+ +A      G  V +   R   +       +    PN           ++
Sbjct: 14  VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT-------VQ 66

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
               N                 +      +       G   +LVN A       L     
Sbjct: 67  ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWT-VIDLNLYGTIHMTKALVEGM-------KQRGRG 273
                            R A+  +   +   N      + KA    +       +     
Sbjct: 127 DG--------HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTN-Y 177

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
            I+       N  + G   YT +K AL+G   +  +E+    + +    P  +       
Sbjct: 178 SIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP 237

Query: 334 EE 335
             
Sbjct: 238 PA 239

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 92.3 bits (229), Expect = 6e-21
 Identities = 40/220 (18%), Positives = 73/220 (33%), Gaps = 36/220 (16%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG  +  + +  G  V +  RD  K  +A E++K +                 
Sbjct: 17  VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN------------- 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA----------- 211
                     + +  LD++     + S         G + +LVN AG+A           
Sbjct: 64  ----------VVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKA 113

Query: 212 LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG 271
           +   + E + + +K+ E+P           L      + +N  G   +T+ L+  ++   
Sbjct: 114 MISDIGEDSEELVKIYEKPEAQELMSETYELAE--ECLKINYNGVKSVTEVLIPLLQLSD 171

Query: 272 RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
              IV  +S   +L                   E     V
Sbjct: 172 SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMV 211

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 91.5 bits (228), Expect = 6e-21
 Identities = 40/221 (18%), Positives = 81/221 (36%), Gaps = 52/221 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTGG  GIG  +A   A  G  + I    D + +     E+                   
Sbjct: 34  VTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG--------------A 79

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEM 219
           +            ++  D++ D  + ++ +   +   G +  LVN AG+A        ++
Sbjct: 80  RV----------IFLRADLA-DLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDL 128

Query: 220 TMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM---KQRGRGCIV 276
             ++                   + +  ++ +NL GT+  T+A+++ M     R    I+
Sbjct: 129 KPEN-------------------FDT--IVGVNLRGTVFFTQAVLKAMLASDARASRSII 167

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
              S +A +       Y  SK  L  F++ L + + ++G+ 
Sbjct: 168 NITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIA 208

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 90.7 bits (226), Expect = 1e-20
 Identities = 46/218 (21%), Positives = 73/218 (33%), Gaps = 43/218 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG  SGIG+ V++  A  GA V     D     +    +                    
Sbjct: 12  VTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGP----------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCG-PVYMLVNCAGMALCGTLEEMTM 221
                           D+S +    R  L+        P  ++V+CAG+     L  M+ 
Sbjct: 55  GSKEGPPRGNHAAFQADVS-EARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSE 113

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITA 279
            D                      W  VI +NL GT  +T+A  + +     RG I+  +
Sbjct: 114 DD----------------------WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINIS 151

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
           S    +G  G   Y +SK  + G  +    E+ + G+ 
Sbjct: 152 SIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIR 189

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 91.7 bits (228), Expect = 1e-20
 Identities = 39/283 (13%), Positives = 69/283 (24%), Gaps = 30/283 (10%)

Query: 64  SSEPRTNLEPPCRGVRTVAS--REPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKR 121
              PR +           +S        M     PT     VTG +  +G+ +A      
Sbjct: 13  GLVPRGSHMGSSHHHHHHSSGLVPRGSHMTA---PTVPVALVTGAAKRLGRSIAEGLHAE 69

Query: 122 GAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI 180
           G  V +   R   +       +    PN           ++    N              
Sbjct: 70  GYAVCLHYHRSAAEANALSATLNARRPNSAIT-------VQADLSNVATAPVSGADGSAP 122

Query: 181 SKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRL 240
              +      +       G   +LVN A       L                      R 
Sbjct: 123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDG--------HEPCVGDRE 174

Query: 241 ALWRSWT-VIDLNLYGTIHMTKALVEGM-------KQRGRGCIVITASQAANLGIYGLAA 292
           A+  +   +   N      + KA    +       +      I+       N  + G   
Sbjct: 175 AMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTN-YSIINMVDAMTNQPLLGYTI 233

Query: 293 YTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE 335
           YT +K AL+G   +  +E+    + +    P  +         
Sbjct: 234 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPA 276

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 91.2 bits (227), Expect = 1e-20
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 35/210 (16%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + G G+  A+  A+ GA   IVA D   L + Q  +  A  +P+     E +E  +
Sbjct: 51  ITGAARGQGRTHAVRLAQDGAD--IVAID---LCRQQPNLDYAQGSPE-----ELKETVR 100

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                +  R I     D+  D  ++++ +  A+   G + +LV+  G++  G +  +T Q
Sbjct: 101 LVE--EQGRRIIARQADVR-DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQ 157

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                               W    ++  NL G  H  +A++  M +RG+ G ++  +S 
Sbjct: 158 Q-------------------WS--DILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSST 196

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEV 311
               G  G + Y +SK  ++G   +L  EV
Sbjct: 197 VGLRGAPGQSHYAASKHGVQGLMLSLANEV 226

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 89.5 bits (223), Expect = 4e-20
 Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 34/209 (16%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ G+G+  A+  A+ GA + I  R E       + +             +  E   
Sbjct: 15  ITGGARGMGRSHAVALAEAGADIAICDRCEN-----SDVVGYPLATAD-----DLAETVA 64

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                K  R      +D+  D   + S +  A D  G + + +  AG++    L E+   
Sbjct: 65  LVE--KTGRRCISAKVDVK-DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESA 121

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W    VI  NL GT +   A+  GM +R  G IV  +S  
Sbjct: 122 Q-------------------WD--EVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSML 160

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEV 311
            +   +  A+Y SSK+ + G  +    ++
Sbjct: 161 GHSANFAQASYVSSKWGVIGLTKCAAHDL 189

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 88.8 bits (221), Expect = 4e-20
 Identities = 53/247 (21%), Positives = 81/247 (32%), Gaps = 50/247 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG  +A   A  G  V I  A       +   +I+ A                
Sbjct: 32  VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-------------- 77

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           KA               D+S D   +R     A +  G V +LVN AG+    T+ E   
Sbjct: 78  KALT----------AQADVS-DPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGD 126

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                +    VI +NL GT +  +   + ++  GR  I+  ++ 
Sbjct: 127 AV-------------------FDR--VIAVNLKGTFNTLREAAQRLRVGGR--IINMSTS 163

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
              L       Y ++K  ++     L  E++   +T+    P  T T  F  E KS    
Sbjct: 164 QVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFL-EGKSDEVR 222

Query: 342 TSLISQT 348
                  
Sbjct: 223 DRFAKLA 229

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 89.2 bits (222), Expect = 5e-20
 Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 47/214 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG SGIG+  AI  A+ GA V I     ++  +  +++K           IE E  +K
Sbjct: 54  VTGGDSGIGRAAAIAYAREGADVAINYLPAEE--EDAQQVKAL---------IE-ECGRK 101

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGTLEEMTM 221
           A            +  D+S D    RS +  A +  G + +L   AG       ++++T 
Sbjct: 102 AVL----------LPGDLS-DESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTS 150

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +         + +                +N++    +T+  +  +  +G   I+ T+S 
Sbjct: 151 EQ--------FQQ-------------TFAVNVFALFWITQEAIPLLP-KG-ASIITTSSI 187

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSG 315
            A      L  Y ++K A+  ++  L  +V + G
Sbjct: 188 QAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKG 221

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 88.6 bits (220), Expect = 6e-20
 Identities = 39/197 (19%), Positives = 69/197 (35%), Gaps = 49/197 (24%)

Query: 103 VTGGSSGIGKHVAIE-AAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTGG+ GIG  +  +        V + ARD  +   A ++++    +P+F +        
Sbjct: 9   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ-------- 60

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                           LDI  D ++IR+         G + +LVN AG+A          
Sbjct: 61  ----------------LDID-DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFH 103

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
              +V                      +  N +GT  +   L+  +K +GR  +V  +S 
Sbjct: 104 IQAEV---------------------TMKTNFFGTRDVCTELLPLIKPQGR--VVNVSSI 140

Query: 282 AANLGIYGLAAYTSSKF 298
            +   +   +     KF
Sbjct: 141 MSVRALKSCSPELQQKF 157

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 88.1 bits (219), Expect = 6e-20
 Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 57/209 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SG+G          GA V ++    + +     ++                    
Sbjct: 14  VTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADLGDRA---------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       + + D++ D   + SAL  A +  G + ++VNCAG             
Sbjct: 55  -----------RFAAADVT-DEAAVASALDLA-ETMGTLRIVVNCAGTG----------N 91

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR--------GRGC 274
            I+V+ +     G  + LA +R   ++D+NL G+ ++ +   E + +          RG 
Sbjct: 92  AIRVLSR----DGVFS-LAAFRK--IVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGV 144

Query: 275 IVITASQAANLGIYGLAAYTSSKFALKGF 303
           I+ TAS AA  G  G AAY++SK  + G 
Sbjct: 145 IINTASVAAFDGQIGQAAYSASKGGVVGM 173

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 87.6 bits (218), Expect = 8e-20
 Identities = 48/216 (22%), Positives = 83/216 (38%), Gaps = 54/216 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + GIG+      AK GA +     +E  L +A E +                    
Sbjct: 10  ITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP---------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D++ D  ++      A+   G +  +V+ AG+       +M ++
Sbjct: 54  -------------VVMDVA-DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLE 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           D                      W  V+ +NL G+  + KA  E M+++  G IV+TAS+
Sbjct: 100 D----------------------WELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR 137

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
              LG  G A Y +S   + G    L +E+ + G+ 
Sbjct: 138 VY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIR 172

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 55/262 (20%)

Query: 77  GVRTVASREPHLQMKRYLAPTNGTLS-----VTGGSSGIGKHVAIEAAKRGAHVTIV-AR 130
            V        +  +   L P + +L      VTG   GIG+ +A+E  +RG  V +  A 
Sbjct: 3   AVTQPRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN 62

Query: 131 DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSA 190
             +   +    IKK                  A            V  ++    E+I   
Sbjct: 63  STESAEEVVAAIKKNGS--------------DAAC----------VKANVG-VVEDIVRM 97

Query: 191 LQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID 250
            + A+   G + ++ + +G+   G ++++T ++        + R             V  
Sbjct: 98  FEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE--------FDR-------------VFT 136

Query: 251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYM 309
           +N  G   + +   + ++  GR  +++  S       +   A Y+ SK A++ FA  + +
Sbjct: 137 INTRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAI 194

Query: 310 EVKQSGLTITLCLPPDTDTPGF 331
           ++    +T+ +  P    T  +
Sbjct: 195 DMADKKITVNVVAPGGIKTDMY 216

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 38/245 (15%), Positives = 70/245 (28%), Gaps = 42/245 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           +TGG+  IG  +A+   ++G  V +     E    +   E+  A                
Sbjct: 16  ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG------------- 62

Query: 162 KACPNPKFIRFIEYVSLDISKD---YENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE 218
            A               D+S      +     +  +    G   +LVN A       L  
Sbjct: 63  SAVL----------CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLP 112

Query: 219 MTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-----RG 273
               +     +           A      +   N    + + +A      + G       
Sbjct: 113 GDDTNGAADAK--------PIDAQVAE--LFGSNAVAPLFLIRAFARRQGEGGAWRSRNL 162

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
            +V       +L + G   YT +K AL G   A  +E+    + +    P  +  P    
Sbjct: 163 SVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP 222

Query: 334 EEKSK 338
           +E  +
Sbjct: 223 QETQE 227

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 85.7 bits (213), Expect = 3e-19
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 61/207 (29%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SG+G+  A+    RG  V ++                              E + 
Sbjct: 7   VTGGASGLGRAAALALKARGYRVVVLDLRR--------------------------EGED 40

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       YV  D++   E++R A+  A +   P++ +V+ AG+ L   +      
Sbjct: 41  L----------IYVEGDVT-REEDVRRAVARAQEE-APLFAVVSAAGVGLAEKILGK--- 85

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIV 276
                       G H  L  +R   V+++NL GT ++ +     M++        RG IV
Sbjct: 86  -----------EGPHG-LESFRR--VLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIV 131

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGF 303
            TAS AA  G  G AAY +SK  +   
Sbjct: 132 NTASVAAFEGQIGQAAYAASKGGVVAL 158

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 86.8 bits (216), Expect = 4e-19
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 48/206 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SGIG+ V+I  AK GA++ I   DE+    A E                 + ++K
Sbjct: 52  ITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG--DANETK---------------QYVEK 94

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGTLEEMTM 221
                  +        D+S D ++ +  +Q  + + G + +LVN          LE +T 
Sbjct: 95  EGVKCVLLPG------DLS-DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITA 147

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +           +                +N++   H+TKA +  +K +G   I+ TAS 
Sbjct: 148 EQ--------LEK-------------TFRINIFSYFHVTKAALSHLK-QG-DVIINTASI 184

Query: 282 AANLGIYGLAAYTSSKFALKGFAEAL 307
            A  G   L  Y+++K A+  F  +L
Sbjct: 185 VAYEGNETLIDYSATKGAIVAFTRSL 210

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 85.7 bits (213), Expect = 4e-19
 Identities = 42/231 (18%), Positives = 71/231 (30%), Gaps = 51/231 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SGIG  +    A+ G  V  + R +                              
Sbjct: 6   ITGSASGIGAALKELLARAGHTVIGIDRGQ------------------------------ 35

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVY-MLVNCAGMALCGTLEEMTM 221
                        +  D+S       +A+   +DRCG V   LV CAG+   G     + 
Sbjct: 36  -----------ADIEADLS-TPGGRETAVAAVLDRCGGVLDGLVCCAGV---GVTAANSG 80

Query: 222 QDIKVME--QPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA 279
             + V        L G    L+  +    + +          A +  ++    G      
Sbjct: 81  LVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAI 140

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
             A   G     AY  SK+A+   A    ++    G+ +  +  P   +TP
Sbjct: 141 ELAEQQG-QTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVA-PGAVETP 189

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 86.1 bits (214), Expect = 5e-19
 Identities = 42/258 (16%), Positives = 85/258 (32%), Gaps = 51/258 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ G G+  A++ A+ GA +  +  D   +    E  +      +     + EE   
Sbjct: 15  VTGGARGQGRSHAVKLAEEGADI--ILFD---ICHDIETNEYPLATSR-----DLEEAGL 64

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                K  R      +D+  D   +   L  A+   G + ++V  AG  +C     + +Q
Sbjct: 65  EVE--KTGRKAYTAEVDVR-DRAAVSRELANAVAEFGKLDVVVANAG--ICPLGAHLPVQ 119

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               +      D++  G I+   A +  +       I+ T S A
Sbjct: 120 A-------------------FA--DAFDVDFVGVINTVHAALPYLTSGAS--IITTGSVA 156

Query: 283 ANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPG 330
             +              G A Y+ +K  +  +   L  ++    +    +  P + +T  
Sbjct: 157 GLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIH-PTNVNTDM 215

Query: 331 FENEEKSKPRETSLISQT 348
             +    +     L + +
Sbjct: 216 LNSAPMYRQFRPDLEAPS 233

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 85.3 bits (212), Expect = 8e-19
 Identities = 51/233 (21%), Positives = 90/233 (38%), Gaps = 50/233 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
            TG   GIG+ +AIE  +RGA V +      K   +   E+KK                 
Sbjct: 26  TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-------------- 71

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           +             +  DIS     + +    A+   G +  +++ +GM +     E+T 
Sbjct: 72  QGVA----------IQADIS-KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQ 120

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +         + +             V +LN  G   + +  ++  ++ GR  I++T+S 
Sbjct: 121 EL--------FDK-------------VFNLNTRGQFFVAQQGLKHCRRGGR--IILTSSI 157

Query: 282 AANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
           AA + GI   A Y  SK A++GF  A  ++    G+T+    P    T  F+ 
Sbjct: 158 AAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDE 210

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 84.9 bits (211), Expect = 1e-18
 Identities = 54/231 (23%), Positives = 90/231 (38%), Gaps = 50/231 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTGGS GIG  +A   A  GA V +      ++      EI++A                
Sbjct: 36  VTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--------------G 81

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
           +A            +  D   D E I  A++  ++  G + +LVN AG+     LEE T+
Sbjct: 82  RAVA----------IRADNR-DAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTV 130

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV-ITAS 280
            D        +               V+ +N        ++    +   GR  I+ I ++
Sbjct: 131 AD--------FDE-------------VMAVNFRAPFVAIRSASRHLGDGGR--IITIGSN 167

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
            A  +   G++ Y++SK AL G  + L  ++   G+T+ +  P  TDT   
Sbjct: 168 LAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMN 218

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 84.5 bits (210), Expect = 1e-18
 Identities = 42/219 (19%), Positives = 80/219 (36%), Gaps = 49/219 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +T G+ G+GK V  +   +G  VT+    +     A E +K              E  K 
Sbjct: 12  ITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTT---AMETMK--------------ETYKD 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMT 220
                +F++       D++   E++   ++ AM   G +  L+N AG  +     L +  
Sbjct: 55  VEERLQFVQ------ADVT-KKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYE 107

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITA- 279
             +                   W    +I  NL    H+ K +V  M+++  G I+    
Sbjct: 108 EDE-------------------WNE--MIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGF 146

Query: 280 -SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
               +  G    +A+ ++K  L    + +  E  + G+T
Sbjct: 147 QGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGIT 185

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 58/224 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI----VARD-EKKLLQAQEEIKKACPNPKFIRFIEY 157
           VTG   G+G+  A+  A+RGA V +           K   A +++               
Sbjct: 14  VTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV-------------- 59

Query: 158 EEIK----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
           EEI+    KA  N                  E     ++ A+D  G + ++VN AG+   
Sbjct: 60  EEIRRRGGKAVAN--------------YDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD 105

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
            +   ++ +D                   W    +  ++L G+  +T+A  + MK++  G
Sbjct: 106 RSFSRISDED-------------------WDI--IQRVHLRGSFQVTRAAWDHMKKQNYG 144

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
            I++TAS +   G +G A Y+++K  L G A  L +E +++ + 
Sbjct: 145 RIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIH 188

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 49/233 (21%), Positives = 83/233 (35%), Gaps = 45/233 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + G G+  A+  A  GA +  +A D   L      +      P+     E     K
Sbjct: 18  ITGAARGQGRAHAVRLAADGADI--IAVD---LCDQIASVPYPLATPE-----ELAATVK 67

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I     D+  D E++ +ALQ  +D  G + ++V  AG+            
Sbjct: 68  LVE--DIGSRIVARQADVR-DRESLSAALQAGLDELGRLDIVVANAGI----APMSAGDD 120

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQ 281
                               W    VID+NL G  H  K  +  + ++G  G IV+ +S 
Sbjct: 121 G-------------------WH--DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS 159

Query: 282 AANLGIY----GLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTP 329
           A   G+     G   Y ++K  + G        +    + + ++  P   +TP
Sbjct: 160 AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIH-PSGVETP 211

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 83.7 bits (208), Expect = 3e-18
 Identities = 58/238 (24%), Positives = 88/238 (36%), Gaps = 61/238 (25%)

Query: 87  HLQMKRYLAPTNGTLS-----------VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL 135
           H  M    A T G  S           VTG S GIG+ +A+E A+RGA V   A  E   
Sbjct: 6   HHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGA 65

Query: 136 LQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAM 195
                  K+A    +                           L+++ D   + + ++  +
Sbjct: 66  EGIGAAFKQAGLEGRGAV------------------------LNVN-DATAVDALVESTL 100

Query: 196 DRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLY 254
              G + +LVN AG+        M M+D    ++                W  VID NL 
Sbjct: 101 KEFGALNVLVNNAGITQDQLA--MRMKD----DE----------------WDAVIDTNLK 138

Query: 255 GTIHMTKALVEGM-KQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
               +++A++  M K RG G IV   S   + G  G   Y ++K  + G   AL  E+
Sbjct: 139 AVFRLSRAVLRPMMKARG-GRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREI 195

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 83.4 bits (207), Expect = 3e-18
 Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 48/230 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG   GIG  VA+   + GA V +  A   K   +   EIK                  
Sbjct: 23  VTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-------------- 68

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
            A            +  DI      I      A+   G + + V+ +G+   G L+++T 
Sbjct: 69  DAIA----------IKADIR-QVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTE 117

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           ++        + R             V  LN  G   + +     + + GR  ++ +++ 
Sbjct: 118 EE--------FDR-------------VFSLNTRGQFFVAREAYRHLTEGGR-IVLTSSNT 155

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF 331
           + +  +   + Y+ SK A+  F      +     +T+    P  T T  F
Sbjct: 156 SKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMF 205

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 83.4 bits (207), Expect = 4e-18
 Identities = 49/222 (22%), Positives = 81/222 (36%), Gaps = 52/222 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTGGS GIG  V   AA++G  V +  A + +        I ++                
Sbjct: 31  VTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG--------------G 76

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG-MALCGTLEEMT 220
           +A            +  D+  +  +I +       + G +  LVN AG +     ++EM+
Sbjct: 77  EAVA----------IPGDVG-NAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMS 125

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGR--GCIVI 277
           ++           R             ++ +N+ G+I      V  M +      G IV 
Sbjct: 126 VER--------IER-------------MLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVN 164

Query: 278 TASQAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            +S AA LG       Y +SK A+  F   L  EV   G+ +
Sbjct: 165 VSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRV 206

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 48/211 (22%), Positives = 78/211 (36%), Gaps = 50/211 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+ +A   AK  +HV  ++R +K      +EIK                   
Sbjct: 49  VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA--------- 99

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+S   E I   +   +     V +LVN AG+        + M+
Sbjct: 100 ---------------GDVS-KKEEISEVINKILTEHKNVDILVNNAGITRDNLF--LRMK 141

Query: 223 DIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITAS 280
           +    ++                W  V+  NL    ++T+ + + M   R  G I+  +S
Sbjct: 142 N----DE----------------WEDVLRTNLNSLFYITQPISKRMINNRY-GRIINISS 180

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
                G  G A Y+SSK  + GF ++L  E+
Sbjct: 181 IVGLTGNVGQANYSSSKAGVIGFTKSLAKEL 211

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 82.2 bits (204), Expect = 7e-18
 Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 47/216 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTGG  GIG  +     K G  V      +  + ++  E+ K    +             
Sbjct: 18  VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD------------- 64

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            ++  D+++ + A        G + +LVN AG+       +MT 
Sbjct: 65  -----------FYASEGNVG-DWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTR 112

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                   W++  VID NL    ++TK +++GM +RG G I+  +S 
Sbjct: 113 ED-------------------WQA--VIDTNLTSLFNVTKQVIDGMVERGWGRIINISSV 151

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
               G +G   Y+++K  + GF  +L  EV   G+T
Sbjct: 152 NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVT 187

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 84.8 bits (210), Expect = 1e-17
 Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 58/224 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI---------VARDEKKLLQAQEEIKKACPNPKFIR 153
           +TG   G+GK+ ++E AK GA V +            + K      +EI K         
Sbjct: 13  ITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG------- 65

Query: 154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
                    A  +            ++  D + I   ++ A+   G V++++N AG+   
Sbjct: 66  -------GVAVADYN----------NVL-DGDKI---VETAVKNFGTVHVIINNAGILRD 104

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG 273
            ++++MT +D                   ++   VID++L G   +TKA     +++  G
Sbjct: 105 ASMKKMTEKD-------------------YKL--VIDVHLNGAFAVTKAAWPYFQKQKYG 143

Query: 274 CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
            IV T+S A   G +G A Y S+K AL GFAE L  E  +  + 
Sbjct: 144 RIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIK 187

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 81.3 bits (201), Expect = 2e-16
 Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 50/239 (20%)

Query: 79  RTVASREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA 138
                          ++  +  + +TG  +G+GK  A   AK GA V  V  D K   + 
Sbjct: 303 EARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKV--VVNDFKDATKT 360

Query: 139 QEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC 198
            +EIK A                +A P+            D++KD E I   ++  +D+ 
Sbjct: 361 VDEIKAAG--------------GEAWPDQH----------DVAKDSEAI---IKNVIDKY 393

Query: 199 GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH 258
           G + +LVN AG+    +  +M+ Q+                   W S  V  ++L GT +
Sbjct: 394 GTIDILVNNAGILRDRSFAKMSKQE-------------------WDS--VQQVHLIGTFN 432

Query: 259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
           +++       ++  G I+   S +   G +G A Y+SSK  + G ++ + +E  ++ + 
Sbjct: 433 LSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIK 491

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 81.4 bits (202), Expect = 1e-17
 Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 50/218 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  VA   A +GA V   A  +    + +  +K+     + +          
Sbjct: 10  VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLV--------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                          L+IS D E+I++           + +LVN AG+     +  M M 
Sbjct: 61  ---------------LNIS-DIESIQNFFAEIKAENLAIDILVNNAGITRDNLM--MRMS 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQR-GRGCIVITAS 280
           +    ++             W+S  VI+ NL     M+K  V GM K+R GR  I+   S
Sbjct: 103 E----DE-------------WQS--VINTNLSSIFRMSKECVRGMMKKRWGR--IISIGS 141

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
              + G  G   Y ++K  + GF+++L  EV    +T+
Sbjct: 142 VVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITV 179

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 53/246 (21%), Positives = 90/246 (36%), Gaps = 56/246 (22%)

Query: 81  VASREPHLQMKRYLAPTNGTLS--------VTGGSSGIGKHVAIEAAKRGAHVTIV-ARD 131
           +A    H  M    A T G  S        VTGG  G+G  ++      G  V +  +  
Sbjct: 1   MAHHHHH-HMGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER 59

Query: 132 EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSAL 191
              +       + A  +                         +  ++D++ D+E+     
Sbjct: 60  NDHVSTWLMHERDAGRD------------------------FKAYAVDVA-DFESCERCA 94

Query: 192 QPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL 251
           +  +   G V +L+N AG+    T  +MT  D                   W +  V+  
Sbjct: 95  EKVLADFGKVDVLINNAGITRDATFMKMTKGD-------------------WDA--VMRT 133

Query: 252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
           +L    ++TK  + GM +R  G IV   S   + G +G A Y S+K  + GF + L +E 
Sbjct: 134 DLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALET 193

Query: 312 KQSGLT 317
            + G+T
Sbjct: 194 AKRGIT 199

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 79.8 bits (198), Expect = 4e-17
 Identities = 50/212 (23%), Positives = 80/212 (37%), Gaps = 50/212 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           +TG S GIG+ +A+  A+ G  + I   ++ +K  +  EE ++                 
Sbjct: 6   ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR---------------- 49

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                      +  +  ++  + E   + +  A +  G +  LVN AG+     L  + M
Sbjct: 50  -------GSPLVAVLGANLL-EAEAATALVHQAAEVLGGLDTLVNNAGITRDTLL--VRM 99

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITA 279
           +D    E                 W  V++ NL      T+  V+ M K R  G IV   
Sbjct: 100 KD----ED----------------WEAVLEANLSAVFRTTREAVKLMMKARF-GRIVNIT 138

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
           S    LG  G A Y +SK  L GF  A+  E 
Sbjct: 139 SVVGILGNPGQANYVASKAGLIGFTRAVAKEY 170

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 79.5 bits (197), Expect = 5e-17
 Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 53/211 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIGK +A   A+RGA V   A  E       + +                    
Sbjct: 14  VTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---------------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      + ++L+++ + E+I + L+   D  G V +LVN AG+     L  M M+
Sbjct: 58  -----------KGMALNVT-NPESIEAVLKAITDEFGGVDILVNNAGITRDNLL--MRMK 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITAS 280
           +    E+                W  +++ NL     ++KA++ GM K+R  G I+   S
Sbjct: 104 E----EE----------------WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGS 142

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
               +G  G A Y ++K  + GF +++  EV
Sbjct: 143 VVGTMGNAGQANYAAAKAGVIGFTKSMAREV 173

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 78.7 bits (195), Expect = 9e-17
 Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 49/211 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S G+GK +A +    GA++ +  +     L    EE K A  N    +        
Sbjct: 10  VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK-------- 61

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            D+  + E++ + ++ AMD  G + +LVN AG+     +  + M
Sbjct: 62  ----------------GDVK-NPEDVENMVKTAMDAFGRIDILVNNAGITRDTLM--LKM 102

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITAS 280
            +    +              W    V++ NL      TKA+ + M KQ+  G I+   S
Sbjct: 103 SE----KD-------------WDD--VLNTNLKSAYLCTKAVSKIMLKQKS-GKIINITS 142

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
            A  +G  G A Y +SK  L GF +++  E 
Sbjct: 143 IAGIIGNAGQANYAASKAGLIGFTKSIAKEF 173

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 78.3 bits (194), Expect = 1e-16
 Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 49/211 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIGK +A+   K G  V +  AR  K   +  ++I+                  
Sbjct: 6   VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFG-------- 57

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            D+S    ++ + ++ A+D  G + ++VN AG+     L  + M
Sbjct: 58  ----------------GDVS-KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLL--IRM 98

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITAS 280
           +      Q             W    VIDLNL G    T+A  + M K+R  G I+  AS
Sbjct: 99  KK----SQ-------------WDE--VIDLNLTGVFLCTQAATKIMMKKRK-GRIINIAS 138

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
               +G  G A Y ++K  + GF++    E 
Sbjct: 139 VVGLIGNIGQANYAAAKAGVIGFSKTAAREG 169

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 81.0 bits (200), Expect = 2e-16
 Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 60/231 (25%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI------VARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           VTG  +G+G+  A+  A+RGA V +       + D      A   +              
Sbjct: 24  VTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVV-------------- 69

Query: 157 YEEIK----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL 212
            +EI+    +A  +             +  D   +   ++ A+   G V +LVN AG+  
Sbjct: 70  -DEIRKAGGEAVADYN----------SVI-DGAKV---IETAIKAFGRVDILVNNAGILR 114

Query: 213 CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR 272
             +L + + QD                   W    V D++L G+   T+A    MK++  
Sbjct: 115 DRSLVKTSEQD-------------------WNL--VNDVHLKGSFKCTQAAFPYMKKQNY 153

Query: 273 GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP 323
           G I++T+S +   G +G   YT++K  L G A  + +E  ++ +   + +P
Sbjct: 154 GRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP 204

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 77.9 bits (193), Expect = 2e-16
 Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 51/212 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +AI+ AK+GA+V +  A +E+K  +  +EIKK   +   +R        
Sbjct: 9   VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR-------- 60

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            D++ + E++ + ++  +D  G V +LVN AG+     L  M M
Sbjct: 61  ----------------ADVA-NAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLL--MRM 101

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITA 279
           ++    E+                W TVI+ NL G    TKA+   M +QR  G IV  A
Sbjct: 102 KE----EE----------------WDTVINTNLKGVFLCTKAVSRFMMRQRH-GRIVNIA 140

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
           S     G  G A Y ++K  + G  +    E+
Sbjct: 141 SVVGVTGNPGQANYVAAKAGVIGLTKTSAKEL 172

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 77.9 bits (193), Expect = 2e-16
 Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 51/212 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A++ A+ G +V +  A  ++K     EEIK    +   I+        
Sbjct: 9   VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ-------- 60

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            +++ D + +++ ++  + + G + +LVN AG+     L  M M
Sbjct: 61  ----------------ANVA-DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLL--MRM 101

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSW-TVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITA 279
           ++    ++                W  VID NL G  +  +     M +QR  G I+  +
Sbjct: 102 KE----QE----------------WDDVIDTNLKGVFNCIQKATPQMLRQRS-GAIINLS 140

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
           S    +G  G A Y ++K  + G  ++   E+
Sbjct: 141 SVVGAVGNPGQANYVATKAGVIGLTKSAAREL 172

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 77.4 bits (191), Expect = 3e-16
 Identities = 31/242 (12%), Positives = 62/242 (25%), Gaps = 53/242 (21%)

Query: 90  MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNP 149
           M   +        ++G ++GIG          G  +  +   +                 
Sbjct: 1   MSIIV--------ISGCATGIGAATRKVLEAAGHQIVGIDIRD----------------- 35

Query: 150 KFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG 209
                                     V  D+S      ++           +  LV CAG
Sbjct: 36  ------------------------AEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAG 71

Query: 210 MALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQ 269
           +     +    +  +        +  +   L        + ++   + H+          
Sbjct: 72  LGPQTKVLGNVV-SVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALA 130

Query: 270 RGRGCIVITASQAANLG-IYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTD 327
              G      +   + G   G  AY  SK AL            ++G+ + T+  P  T+
Sbjct: 131 LEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIA-PGATE 189

Query: 328 TP 329
           TP
Sbjct: 190 TP 191

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 49/211 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A+E A  GA V +  A       +    I  A      ++        
Sbjct: 33  VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK-------- 84

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                            D+S     + +     ++R G + +LVN AG+     L  + M
Sbjct: 85  ----------------ADVS-QESEVEALFAAVIERWGRLDVLVNNAGITRDTLL--LRM 125

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITAS 280
           +     +              W+S  V+DLNL G    ++A  + M KQR  G I+  AS
Sbjct: 126 KR----DD-------------WQS--VLDLNLGGVFLCSRAAAKIMLKQRS-GRIINIAS 165

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEV 311
               +G  G A Y+++K  + G  + +  E+
Sbjct: 166 VVGEMGNPGQANYSAAKAGVIGLTKTVAKEL 196

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 77.2 bits (191), Expect = 4e-16
 Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 63/244 (25%)

Query: 87  HLQMKRYLAPTNGTLS----------VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL 136
           H  M    A T G  S          VTG + GIG+ +A     +GA V +    E KL 
Sbjct: 6   HHHMGTLEAQTQGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK 65

Query: 137 QAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMD 196
           +   ++ K                                S ++S D ++I+   + A  
Sbjct: 66  EIAADLGKDV---------------------------FVFSANLS-DRKSIKQLAEVAER 97

Query: 197 RCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT 256
               + +LVN AG+   G    + MQD    +              W    V+ +NL   
Sbjct: 98  EMEGIDILVNNAGITRDGLF--VRMQD----QD-------------WDD--VLAVNLTAA 136

Query: 257 IHMTKALVEGM-KQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQS 314
             +T+ L+  M ++R GR  I+   S    +G  G   Y ++K  L GF++AL  E+   
Sbjct: 137 STLTRELIHSMMRRRYGR--IINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASR 194

Query: 315 GLTI 318
            +T+
Sbjct: 195 NITV 198

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 76.8 bits (190), Expect = 4e-16
 Identities = 48/210 (22%), Positives = 77/210 (36%), Gaps = 47/210 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG+ +A + A  G+ V I     ++     EEI                    
Sbjct: 12  VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHG---------- 61

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +++    E+I  A +   +    + +LVN AG+        + M 
Sbjct: 62  -------------VEMNLL-SEESINKAFEEIYNLVDGIDILVNNAGITRDKLF--LRMS 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITASQ 281
                               W    V+ +NL GT  +T+  +  M KQR  G IV  +S 
Sbjct: 106 L----LD-------------WEE--VLKVNLTGTFLVTQNSLRKMIKQRW-GRIVNISSV 145

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEV 311
               G  G   Y+++K  L GF ++L  E+
Sbjct: 146 VGFTGNVGQVNYSTTKAGLIGFTKSLAKEL 175

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 76.3 bits (188), Expect = 2e-15
 Identities = 42/264 (15%), Positives = 88/264 (33%), Gaps = 73/264 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI------VARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           VTG   GIG+  A+  A  GA V +      +         A + +              
Sbjct: 32  VTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVV------------- 78

Query: 157 YEEIK----KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL 212
            +EI     +A  +            +++ D++     +Q A++  G + +LVN AG+  
Sbjct: 79  -DEITAAGGEAVADGS----------NVA-DWDQAAGLIQTAVETFGGLDVLVNNAGIVR 126

Query: 213 CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR 272
              +   + ++                   + +  VI ++L G     +      +   +
Sbjct: 127 DRMIANTSEEE-------------------FDA--VIAVHLKGHFATMRHAAAYWRGLSK 165

Query: 273 ------GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-------- 318
                 G I+ T+S A   G  G   Y+++K  +         E+ + G+T+        
Sbjct: 166 AGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSAR 225

Query: 319 ---TLCLPPDTDTPGFENEEKSKP 339
              T  +  +      ++ +   P
Sbjct: 226 TRMTETVFAEMMATQDQDFDAMAP 249

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 74.5 bits (184), Expect = 3e-15
 Identities = 46/217 (21%), Positives = 78/217 (35%), Gaps = 61/217 (28%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG  +A   A  G  V +  R                                
Sbjct: 20  VTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG---------------------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D++ D + +  A     +  GPV +LV+ AG++    L  M M 
Sbjct: 58  -------------VEVDVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFL--MRMT 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQR-GRGCIVITAS 280
           +    E+             +    VI+ NL G   + +     M + + GR  ++   S
Sbjct: 102 E----EK-------------FEK--VINANLTGAFRVAQRASRSMQRNKFGR--MIFIGS 140

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
            +   GI   A Y +SK  + G A ++  E+ ++ +T
Sbjct: 141 VSGLWGIGNQANYAASKAGVIGMARSIARELSKANVT 177

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 76.2 bits (188), Expect = 4e-15
 Identities = 50/218 (22%), Positives = 84/218 (38%), Gaps = 52/218 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG  +A   A+ GA V  +  D      A E++K+             +++  
Sbjct: 218 VTGAARGIGATIAEVFARDGATVVAIDVDG-----AAEDLKR-----------VADKVGG 261

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCG-PVYMLVNCAGMALCGTLEEMTM 221
                        ++LD++   + +        +  G  V +LVN AG+     L    M
Sbjct: 262 TA-----------LTLDVT-ADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLL--ANM 307

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITAS 280
            +    ++             W +  VI +NL     +T+ LV       G G ++  +S
Sbjct: 308 DE----KR-------------WDA--VIAVNLLAPQRLTEGLVGNGTIGEG-GRVIGLSS 347

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
            A   G  G   Y ++K  + G AEAL   +   G+TI
Sbjct: 348 MAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITI 385

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 73.7 bits (182), Expect = 5e-15
 Identities = 54/216 (25%), Positives = 79/216 (36%), Gaps = 59/216 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG  +A   A  G  V I  R  +                             
Sbjct: 26  VTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA---------------------- 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  DI+ D E +  A +   +  GPV +L+  AG+     L  M M 
Sbjct: 64  -------------VKCDIT-DTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLL--MRMS 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQRGRGCIVITASQ 281
           +    E              + S  V++ NL GT  + K     M + + +G +V+ +S 
Sbjct: 108 E----ED-------------FTS--VVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSV 147

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT 317
              LG  G A Y +SK  L GFA +L  E+    +T
Sbjct: 148 VGLLGSAGQANYAASKAGLVGFARSLARELGSRNIT 183

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 72.5 bits (179), Expect = 1e-14
 Identities = 47/218 (21%), Positives = 81/218 (37%), Gaps = 57/218 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG  +A    K G+ V I   +E+KL      +K                   
Sbjct: 19  ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNY---------------- 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           +++ + E   + +     +   + +LV  AG+        + M+
Sbjct: 63  -----------TIEVCNLA-NKEECSNLI----SKTSNLDILVCNAGITSDTLA--IRMK 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGM-KQR-GRGCIVITAS 280
           D    +              +    VID+NL     + +  ++ M ++R GR  I+  +S
Sbjct: 105 D----QD-------------FDK--VIDINLKANFILNREAIKKMIQKRYGR--IINISS 143

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI 318
                G  G A Y +SK  L G  ++L  EV   G+T+
Sbjct: 144 IVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITV 181

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 43/253 (16%), Positives = 83/253 (32%), Gaps = 55/253 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIG+ +A   A  GA V I     +++  +   EI+                  
Sbjct: 12  VTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG--------------G 57

Query: 162 KACPNPKFIRFIEYVSLDISKD------YENIRSALQPAMDRCGPVYMLVNCAGMALCGT 215
            A            +  ++         Y ++ + LQ          +L+N AG+     
Sbjct: 58  SAFS----------IGANLESLHGVEALYSSLDNELQNRTGS-TKFDILINNAGIGPGAF 106

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
           +EE T Q         + R             ++ +N      + +  +  ++   R  I
Sbjct: 107 IEETTEQF--------FDR-------------MVSVNAKAPFFIIQQALSRLRDNSR--I 143

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE 335
           +  +S A  + +    AY+ +K A+      L  ++   G+T+   LP    T       
Sbjct: 144 INISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELL 203

Query: 336 KSKPRETSLISQT 348
                +    + +
Sbjct: 204 SDPMMKQYATTIS 216

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 75/252 (29%)

Query: 89  QMKRYLAPTNGTLSVTGGSSGIGKHVA---IEAAKRGAHVTIVARDEKKLLQAQEEIKKA 145
            M   L        +TG + G+G  +    +   +   H+    R+ ++  + + ++ K 
Sbjct: 20  HMNSIL--------ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKN 70

Query: 146 CPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQ--PAMDRCGPVYM 203
             N                        I  + +D+  +++     +     + +   + +
Sbjct: 71  HSN------------------------IHILEIDLR-NFDAYDKLVADIEGVTKDQGLNV 105

Query: 204 LVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKA 262
           L N AG+A     +  +  Q+         L    T             N    I + KA
Sbjct: 106 LFNNAGIAPKSARITAVRSQE--------LLDTLQT-------------NTVVPIMLAKA 144

Query: 263 LVEGMKQ-----------RGRGCIVITASQAANLGIY---GLAAYTSSKFALKGFAEALY 308
            +  +K+            GR  I+  +S   ++      G+ AY +SK AL    ++L 
Sbjct: 145 CLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLS 204

Query: 309 MEVKQSGLTITL 320
           +++    +    
Sbjct: 205 VDLYPQRIMCVS 216

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 61.9 bits (151), Expect = 8e-11
 Identities = 49/234 (20%), Positives = 75/234 (32%), Gaps = 80/234 (34%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG +SG+G   A E A+RGA V +  RD +K   A   +                    
Sbjct: 21  ITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ----------------- 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +E   LD+  D  ++R       D      +L+N AG             
Sbjct: 64  ----------VEVRELDLQ-DLSSVRRFA----DGVSGADVLINNAG------------- 95

Query: 223 DIKVMEQPLWL--RGYHTRLALWRSWTVIDLNLYGTIHM--TKALVEGMKQRGRGCIVIT 278
              +M  P  L   G+ +++           N  G  H   T  L+  +  R    +V  
Sbjct: 96  ---IMAVPYALTVDGFESQIG---------TNHLG--HFALTNLLLPRLTDR----VVTV 137

Query: 279 ASQAANLGI------------YG-LAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
           +S A   G             Y    AY+ SK A   F   L   +  +G  + 
Sbjct: 138 SSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLR 191

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 58.1 bits (141), Expect = 8e-10
 Identities = 39/244 (15%), Positives = 76/244 (31%), Gaps = 72/244 (29%)

Query: 103 VTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           VTG + GIG  +  +  K     H+   ARD +K  + +                     
Sbjct: 8   VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR--------------- 52

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCG--PVYMLVNCAGMALC-GTLE 217
                       +  + L ++   +++ + +    +  G   + +L+N AG+ L  GT  
Sbjct: 53  ------------VHVLPLTVT-CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNT 99

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQ-------- 269
           E                                 N    + +T+ L+  +K         
Sbjct: 100 EPNRAV--------IAEQLDV-------------NTTSVVLLTQKLLPLLKNAASKESGD 138

Query: 270 ---RGRGCIV-IT---ASQAANLG---IYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
                R  ++ I+    S   N      + + AY  SK A+  F   L +++K   + + 
Sbjct: 139 QLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVV 198

Query: 320 LCLP 323
              P
Sbjct: 199 NFCP 202

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 14/68 (20%), Positives = 20/68 (29%), Gaps = 4/68 (5%)

Query: 80  TVASREPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ 139
            VA            +       V  G+  +G   A   A  GA V +  R   K   A 
Sbjct: 105 GVALVVKAAG----GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA 160

Query: 140 EEIKKACP 147
           + + K   
Sbjct: 161 DSVNKRFK 168

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 3e-07
 Identities = 58/545 (10%), Positives = 139/545 (25%), Gaps = 186/545 (34%)

Query: 3   IEKFGPRKYEIEASRAQTWSRRAAAYEQSRAEPHLQMKRYLAPTNGTLSVDGAAGSFKNF 62
           ++KF      +E      +    +  +  + +P +  + Y+   +            + +
Sbjct: 79  VQKF------VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD------------RLY 120

Query: 63  KSSEPRTNLEPPCRGVRTVASREPHLQMKRYLA---PTNGTLSVTGGSSGIGKHV-AIEA 118
             ++              V+  +P+L++++ L    P    + + G   G GK   A++ 
Sbjct: 121 NDNQV---FAK-----YNVSRLQPYLKLRQALLELRPAKN-VLIDGV-LGSGKTWVALD- 169

Query: 119 AKRGAHVTIVARDEKKLLQAQEEIKKACPNPKF-IRFIEYEEIKKACPNPKFIRFIEYVS 177
                    V    K        ++       F +        +        +  ++ + 
Sbjct: 170 ---------VCLSYK--------VQCKMDFKIFWLNLKNCNSPE------TVLEMLQKLL 206

Query: 178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYH 237
             I  ++ +          R                  +  +  +  ++++   +     
Sbjct: 207 YQIDPNWTSRSDHSSNIKLR------------------IHSIQAELRRLLKSKPYENCL- 247

Query: 238 TRLAL---WRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC-IVITASQAANLGIYGLAAY 293
             L L     +      NL                    C I++T            A  
Sbjct: 248 --LVLLNVQNAKAWNAFNL-------------------SCKILLTTRFKQVTDFLSAATT 286

Query: 294 T--SSKFALKGFAE-------ALYMEVKQSGL----------TITLC---LPPDTDTPGF 331
           T  S                   Y++ +   L           +++    +     T   
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346

Query: 332 ----ENEEKSKPRETSLISQTGGLYR---------PEVVKQSGLTITLCL----PPDTDT 374
                 ++ +   E+SL       YR         P        TI L L       +D 
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP--TILLSLIWFDVIKSDV 404

Query: 375 PGFENEEKSKPRETSLISQTG--------GLY------RPEVVA--KQLLE-----DALK 413
               N+        SL+ +           +Y           A  + +++         
Sbjct: 405 MVVVNKLHKY----SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD 460

Query: 414 GNYFSTVGLESYLITTLCAGFSPIV----SIQETFIQAFLMGPLRLTAIYLHWTFDNIVK 469
            +      L+ Y        +S I     +I+    +   +       ++L + F  + +
Sbjct: 461 SDDLIPPYLDQYF-------YSHIGHHLKNIEHP--ERMTL----FRMVFLDFRF--LEQ 505

Query: 470 KCRKS 474
           K R  
Sbjct: 506 KIRHD 510

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIK 143
           + G S  +G  +  EA  RG  VT V R  +K+    E +K
Sbjct: 9   LIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLK 49

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIK 143
           + G +   G  +  EA  RG  VT + R+  K+ Q  ++I 
Sbjct: 5   IIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDIN 45

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL 135
           + G +   G     +A + G  VT++ RD  +L
Sbjct: 8   IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL 40

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL 135
           V G +   G  +  EA +RG  V  V RD +K 
Sbjct: 5   VLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA 37

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 5/33 (15%), Positives = 14/33 (42%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL 135
           + G +  +GK +    +     +   AR  +++
Sbjct: 5   IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	475
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.98
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.96
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.93
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.91
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.88
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.86
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.86
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.86
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.85
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.85
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.85
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.85
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.85
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.85
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.84
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.84
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.84
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.84
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.83
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.83
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.82
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.82
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.82
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.82
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.82
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.81
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.81
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.81
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.81
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.81
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.81
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.8
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.8
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.8
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.8
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.79
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.79
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.79
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.79
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.79
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.79
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.78
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.78
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.78
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.77
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.77
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.77
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.77
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.77
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.77
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.77
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.76
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.76
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.76
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.76
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.75
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.75
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.73
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.73
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.72
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.72
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.71
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.71
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.7
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.7
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.69
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.68
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.68
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.67
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.67
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.67
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.66
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.66
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.66
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.64
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.64
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.62
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.6
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.58
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.56
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.55
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.52
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.51
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.5
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.49
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.46
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.42
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.42
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.38
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.28
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.23
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.18
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.96
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.81
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.66
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.64
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.56
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.55
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.42
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.42
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.41
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.37
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.36
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.28
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.25
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.23
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.14
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.14
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.14
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.13
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.13
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.12
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.1
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.07
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.07
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.05
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.01
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.94
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.89
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.86
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.85
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.84
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.84
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.75
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.73
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.72
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.72
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.71
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.64
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.57
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.55
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.55
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.55
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.53
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.52
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.51
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.5
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.46
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.45
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.4
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.38
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.38
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.35
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.31
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.3
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.28
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.28
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.27
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.27
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.23
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.22
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.2
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.19
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.15
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.1
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.08
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.05
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.0
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.85
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.82
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.81
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.79
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.76
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.73
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.73
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.7
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.7
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.68
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.65
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.64
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.63
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.61
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.61
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.6
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.59
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.57
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.56
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.55
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.55
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.53
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.52
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.49
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.46
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.42
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.4
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.4
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.4
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.4
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.4
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.34
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.32
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.31
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.27
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.26
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.25
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.22
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.19
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.19
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.17
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.16
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.15
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.15
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.11
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.03
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.98
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	95.97
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.95
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.95
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.92
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.91
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.89
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.88
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.82
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.8
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.74
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	95.73
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.63
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.62
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.58
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.57
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.56
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.45
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.43
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.4
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.33
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.31
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.3
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.19
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.19
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.08
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	94.97
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	94.96
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	94.92
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.86
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	94.8
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.77
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	94.76
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	94.67
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	94.62
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	94.6
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	94.56
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.51
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	94.48
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	94.42
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	94.41
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	94.38
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.36
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.23
1lnq_A	336	MTHK channels, potassium channel related protein;	94.2
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	94.2
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	94.16
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	94.13
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	94.13
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	94.05
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	93.99
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	93.95
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	93.9
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	93.89
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	93.89
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	93.87
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	93.81
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	93.75
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	93.74
3l07_A	285	Bifunctional protein fold; structural genomics, ID	93.68
3qha_A	296	Putative oxidoreductase; seattle structural genomi	93.4
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	93.39
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	93.3
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	93.27
4g65_A	461	TRK system potassium uptake protein TRKA; structur	93.17
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	93.15
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	93.12
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	93.11
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	93.03
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	92.95
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	92.94

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=8e-51  Score=395.84  Aligned_cols=237  Identities=24%  Similarity=0.290  Sum_probs=216.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+                        .+
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g------------------------~~   57 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG------------------------KE   57 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC------------------------Cc
Confidence            468999999999999999999999999999999999999999999999998765                        56


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++++|++ |+++++++++++.++||+||+||||||+.. ..++.+.+.++|+++                     |++
T Consensus        58 ~~~~~~Dvt-~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~---------------------~~v  115 (254)
T 4fn4_A           58 VLGVKADVS-KKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV---------------------LAV  115 (254)
T ss_dssp             EEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHH---------------------HHH
T ss_pred             EEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHH---------------------HHH
Confidence            889999999 999999999999999999999999999875 478999999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+|+++|+++|+|++++.|+|||+||+++..+.++..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|||.
T Consensus       116 Nl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  195 (254)
T 4fn4_A          116 NLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIG  195 (254)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCT
T ss_pred             HhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccccCCcccc----ccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         332 ENEEKSKPRET----SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       332 ~~~~~~~~~~~----~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .......+...    ....+++|+++|||||++  .+||+++..++++|-
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~--v~fLaSd~a~~iTG~  243 (254)
T 4fn4_A          196 LGSSKPSELGMRTLTKLMSLSSRLAEPEDIANV--IVFLASDEASFVNGD  243 (254)
T ss_dssp             TSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             ccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHH--HHHHhCchhcCCcCC
Confidence            76554433222    223478999999999986  568999999998874

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=5.1e-51  Score=397.44  Aligned_cols=240  Identities=21%  Similarity=0.181  Sum_probs=218.0

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |..+|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+                       
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-----------------------   57 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-----------------------   57 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-----------------------
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----------------------
Confidence            456789999999999999999999999999999999999999999999999998765                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ |+++++++++++.++||+||+||||||+....++.+.+.++|+++                     +
T Consensus        58 -~~~~~~~~Dv~-~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~---------------------~  114 (255)
T 4g81_D           58 -YDAHGVAFDVT-DELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKV---------------------I  114 (255)
T ss_dssp             -CCEEECCCCTT-CHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------H
T ss_pred             -CcEEEEEeeCC-CHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHH---------------------H
Confidence             56889999999 999999999999999999999999999998899999999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhC-CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.|+|+++|+++|+|.++ +.|+|||+||.++..+.++..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|
T Consensus       115 ~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T  194 (255)
T 4g81_D          115 DTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILT  194 (255)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCC
Confidence            999999999999999999764 5699999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         329 PGFENEEKSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ||...........  .....|++|+++|||||++  .+||+++..++++|-
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~--v~fL~S~~a~~iTG~  243 (255)
T 4g81_D          195 DMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGT--AIFLSSKASDYINGQ  243 (255)
T ss_dssp             GGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHH--HHHHHSGGGTTCCSC
T ss_pred             chhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHH--HHHHhCchhCCCcCC
Confidence            9877654332222  2234699999999999986  568999999999874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.5e-49  Score=380.94  Aligned_cols=233  Identities=22%  Similarity=0.247  Sum_probs=204.5

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |.+.|+|+||++|||||++|||+++|++|+++|++|++++|+..  +++.+++.+.+                       
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g-----------------------   55 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG-----------------------   55 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT-----------------------
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC-----------------------
Confidence            45678999999999999999999999999999999999999864  45566666654                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ |+++++++++     +|+||+||||||+....++.+++.++|+++                     +
T Consensus        56 -~~~~~~~~Dv~-d~~~v~~~~~-----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~---------------------~  107 (247)
T 4hp8_A           56 -GNASALLIDFA-DPLAAKDSFT-----DAGFDILVNNAGIIRRADSVEFSELDWDEV---------------------M  107 (247)
T ss_dssp             -CCEEEEECCTT-STTTTTTSST-----TTCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------H
T ss_pred             -CcEEEEEccCC-CHHHHHHHHH-----hCCCCEEEECCCCCCCCCcccccHHHHHHH---------------------H
Confidence             56889999999 8888877663     589999999999998899999999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.|+|+++|+++|+|++++ .|+||||||+++..+.++.++|++||+|+.+|+|+||.||+++|||||+|+||+|+|
T Consensus       108 ~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T  187 (247)
T 4hp8_A          108 DVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIET  187 (247)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             HHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCC
Confidence            9999999999999999998765 699999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         329 PGFENEEKSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ||.+.........  .....|++|+++|||||.+  .+||+++..++++|-
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~--v~fLaSd~a~~iTG~  236 (247)
T 4hp8_A          188 NNTEALRADAARNKAILERIPAGRWGHSEDIAGA--AVFLSSAAADYVHGA  236 (247)
T ss_dssp             GGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHH--HHHHTSGGGTTCCSC
T ss_pred             cchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHH--HHHHhCchhcCCcCC
Confidence            9887554332222  2234699999999999986  578999999999884

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.7e-48  Score=379.96  Aligned_cols=230  Identities=23%  Similarity=0.275  Sum_probs=202.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                           .++.
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g---------------------------~~~~   78 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG---------------------------GGAV   78 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------------------------TTCE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---------------------------CCeE
Confidence            4899999999999999999999999999999999999999988877662                           3467


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++++|++ |.++++++++++.++||+||+||||||+....++.+.+.++|+++                     +++|+.
T Consensus        79 ~~~~Dv~-~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~---------------------~~vNl~  136 (273)
T 4fgs_A           79 GIQADSA-NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDT---------------------FDRNVK  136 (273)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHH---------------------HHHHhH
Confidence            8899999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+|+++|+++|+|++  .|+|||+||.++..+.|+..+|++||+|+.+|+|+||.||+++|||||+|+||+|+||++.+.
T Consensus       137 g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~  214 (273)
T 4fgs_A          137 GVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVEL  214 (273)
T ss_dssp             HHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC------
T ss_pred             HHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHh
Confidence            999999999999975  489999999999999999999999999999999999999999999999999999999998765


Q ss_pred             ccCCccc-------cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKPRE-------TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~~~-------~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ....+..       .....|++|+++|||||++  .+||+++..++++|-
T Consensus       215 ~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~--v~FLaSd~a~~iTG~  262 (273)
T 4fgs_A          215 AGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAA--ALFLASDDSSFVTGA  262 (273)
T ss_dssp             ---CHHHHHHHHHHHHHHSTTSSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hccCchhhHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCccCC
Confidence            4433221       1224699999999999986  578999999999884

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=6e-47  Score=369.79  Aligned_cols=233  Identities=22%  Similarity=0.276  Sum_probs=200.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+.+                        .++
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~------------------------~~~   57 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQ------------------------PRA   57 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHC------------------------TTC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcC------------------------CCE
Confidence            6899999999999999999999999999999999999987754 344555554                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |+++++++++++.++||+||+||||||+..... .+.+.++|+++                     +++|+
T Consensus        58 ~~~~~Dv~-~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~-~~~~~e~~~~~---------------------~~vNl  114 (258)
T 4gkb_A           58 TYLPVELQ-DDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG-LDAGRDAFVAS---------------------LERNL  114 (258)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC-TTSCHHHHHHH---------------------HHHHT
T ss_pred             EEEEeecC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-ccCCHHHHHHH---------------------HHHHh
Confidence            78999999 999999999999999999999999999875444 47899999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+|+++|+++|+|+++ +|+|||+||+++..+.++..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|||+++
T Consensus       115 ~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~  193 (258)
T 4gkb_A          115 IHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRN  193 (258)
T ss_dssp             HHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC--
T ss_pred             HHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhh
Confidence            99999999999999765 49999999999999999999999999999999999999999999999999999999999876


Q ss_pred             cccCCcc------ccccccccC-CCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKSKPR------ETSLISQTG-GLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~~~~------~~~~~~~~~-~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .......      ......|++ |+++|||||++  .+||+++..++++|-
T Consensus       194 ~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~--v~fLaS~~a~~iTG~  242 (258)
T 4gkb_A          194 WIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADT--AVFLLSPRASHTTGE  242 (258)
T ss_dssp             ---------CHHHHHHTTCTTTTSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHH--HHHHhCchhcCccCC
Confidence            5432211      112235775 99999999986  578999999999884

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=8.8e-47  Score=364.05  Aligned_cols=221  Identities=24%  Similarity=0.260  Sum_probs=189.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..                              ..++..
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~------------------------------~~~~~~   58 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR------------------------------HPRIRR   58 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC------------------------------CTTEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh------------------------------cCCeEE
Confidence            58999999999999999999999999999999999977553210                              146888


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |+++++++++    ++|+||+||||||+..  ++.+.+.++|+++                     +++|+.|
T Consensus        59 ~~~Dv~-~~~~v~~~~~----~~g~iDiLVNNAGi~~--~~~~~~~~~w~~~---------------------~~vNl~g  110 (242)
T 4b79_A           59 EELDIT-DSQRLQRLFE----ALPRLDVLVNNAGISR--DREEYDLATFERV---------------------LRLNLSA  110 (242)
T ss_dssp             EECCTT-CHHHHHHHHH----HCSCCSEEEECCCCCC--GGGGGSHHHHHHH---------------------HHHHTHH
T ss_pred             EEecCC-CHHHHHHHHH----hcCCCCEEEECCCCCC--CcccCCHHHHHHH---------------------HHHhhHH
Confidence            999999 9998877664    6899999999999863  5778899999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      +|+++|+++|+|+++ .|+||||||+++..+.++.++|++||+|+.+|+|+||.||+++|||||+|+||+|+|||.....
T Consensus       111 ~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~  189 (242)
T 4b79_A          111 AMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK  189 (242)
T ss_dssp             HHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C
T ss_pred             HHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc
Confidence            999999999999765 4999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             cCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         336 KSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       336 ~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ...+..  .....|++|+++|||||++  .+||+++..++++|-
T Consensus       190 ~~~~~~~~~~~~~PlgR~g~peeiA~~--v~fLaSd~a~~iTG~  231 (242)
T 4b79_A          190 ADVEATRRIMQRTPLARWGEAPEVASA--AAFLCGPGASFVTGA  231 (242)
T ss_dssp             CCHHHHHHHHHTCTTCSCBCHHHHHHH--HHHHTSGGGTTCCSC
T ss_pred             CCHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCccCc
Confidence            432222  2234699999999999986  578999999999884

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.3e-45  Score=357.71  Aligned_cols=220  Identities=21%  Similarity=0.274  Sum_probs=194.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|+||||||++|||+++|++|+++|++|++++|++++++++.++    .                        .++.+++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----~------------------------~~~~~~~   53 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----R------------------------PNLFYFH   53 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----C------------------------TTEEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c------------------------CCEEEEE
Confidence            69999999999999999999999999999999998877654432    2                        4578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |+++++++++++.++||+||+||||||+....++.+.+.++|+++                     +++|+.|+|
T Consensus        54 ~Dv~-~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~---------------------~~vNl~g~~  111 (247)
T 3ged_A           54 GDVA-DPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYI---------------------LSVGLKAPY  111 (247)
T ss_dssp             CCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHH---------------------HHHHTHHHH
T ss_pred             ecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 999999999999999999999999999998899999999999988                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      +++|+++|+|++++ |+|||+||.++..+.++..+|++||+|+.+|+|+||.||++ |||||+|+||+|+|++.+...  
T Consensus       112 ~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~--  187 (247)
T 3ged_A          112 ELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT--  187 (247)
T ss_dssp             HHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CC--
T ss_pred             HHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH--
Confidence            99999999998864 99999999999999999999999999999999999999998 999999999999999765432  


Q ss_pred             CccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         338 KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       338 ~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                        .......|++|+++|||||++.+  ||++  +++++|-
T Consensus       188 --~~~~~~~Pl~R~g~pediA~~v~--fL~s--~~~iTG~  221 (247)
T 3ged_A          188 --QEDCAAIPAGKVGTPKDISNMVL--FLCQ--QDFITGE  221 (247)
T ss_dssp             --HHHHHTSTTSSCBCHHHHHHHHH--HHHH--CSSCCSC
T ss_pred             --HHHHhcCCCCCCcCHHHHHHHHH--HHHh--CCCCCCC
Confidence              22233469999999999998765  4555  3577763

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=4e-46  Score=364.80  Aligned_cols=230  Identities=22%  Similarity=0.241  Sum_probs=199.1

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |.++|+|+||++|||||++|||+++|++|+++|++|++++|+.++.          .                       
T Consensus         3 m~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~-----------------------   49 (261)
T 4h15_A            3 MIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------L-----------------------   49 (261)
T ss_dssp             CCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------S-----------------------
T ss_pred             chhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------C-----------------------
Confidence            3456899999999999999999999999999999999999975421          0                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                       .+..++++|++ +.++++++++++.++||+||+||||||+..  .+++.+.+.++|+++                    
T Consensus        50 -~~~~~~~~Dv~-~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~--------------------  107 (261)
T 4h15_A           50 -PEELFVEADLT-TKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNE--------------------  107 (261)
T ss_dssp             -CTTTEEECCTT-SHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHH--------------------
T ss_pred             -CcEEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHH--------------------
Confidence             12236889999 999999999999999999999999999864  357899999999988                    


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC-CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                       +++|+.|+++++|+++|+|++++.|+|||+||..+..+.| +...|++||+|+.+|+++||.||+++|||||+|+||+|
T Consensus       108 -~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i  186 (261)
T 4h15_A          108 -LSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWI  186 (261)
T ss_dssp             -HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             -HHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCc
Confidence             9999999999999999999999999999999999999876 67899999999999999999999999999999999999


Q ss_pred             CCCCCcccccCC------c--------cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         327 DTPGFENEEKSK------P--------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       327 ~T~~~~~~~~~~------~--------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +||+........      .        .......|++|+++|||||++  .+||+++..++++|-
T Consensus       187 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~--v~fLaS~~a~~itG~  249 (261)
T 4h15_A          187 ETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANL--IAFLASDRAASITGA  249 (261)
T ss_dssp             CCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             CCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHH--HHHHhCchhcCccCc
Confidence            999765432110      0        011124589999999999986  577899999998874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.6e-45  Score=358.08  Aligned_cols=236  Identities=14%  Similarity=0.123  Sum_probs=207.6

Q ss_pred             CCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          93 YLAPTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        93 ~~~l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      |++|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++.+.+.                       
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-----------------------   57 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-----------------------   57 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-----------------------
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------------------
Confidence            6889999999999875  999999999999999999999999999998888876543                       


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                      .++.++++|++ ++++++++++++.++||+||+||||||+...    ..+.+.+.++|+..                   
T Consensus        58 ~~~~~~~~Dv~-~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~-------------------  117 (256)
T 4fs3_A           58 PEAHLYQIDVQ-SDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLA-------------------  117 (256)
T ss_dssp             SSCEEEECCTT-CHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHH-------------------
T ss_pred             CcEEEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHH-------------------
Confidence            46788999999 9999999999999999999999999998643    35567888888877                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                        +++|+.+++.+++.+++.|.+  .|+|||+||.++..+.+++..|++||+|+.+|+++||.||+++|||||+|+||+|
T Consensus       118 --~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i  193 (256)
T 4fs3_A          118 --QDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPI  193 (256)
T ss_dssp             --HHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred             --HHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCC
Confidence              999999999999999987754  4999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         327 DTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       327 ~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +|++.+.......  .......|++|+++|||||++.  +||+++..++++|-
T Consensus       194 ~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v--~fL~Sd~a~~iTG~  244 (256)
T 4fs3_A          194 RTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTA--AYLLSDLSSGVTGE  244 (256)
T ss_dssp             CSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             CChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCchhcCccCC
Confidence            9998776543222  1222346999999999999874  68899999998874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=3.4e-43  Score=341.07  Aligned_cols=236  Identities=25%  Similarity=0.337  Sum_probs=209.5

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |..+++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                          
T Consensus         1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------------   54 (248)
T 3op4_A            1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--------------------------   54 (248)
T ss_dssp             -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------------------------
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------------------
Confidence            345678999999999999999999999999999999999999998888777653                          


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       ....++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     +
T Consensus        55 -~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~  111 (248)
T 3op4_A           55 -DNGKGMALNVT-NPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI---------------------M  111 (248)
T ss_dssp             -GGEEEEECCTT-CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------H
T ss_pred             -ccceEEEEeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------H
Confidence             34668899999 999999999999999999999999999988888899999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       112 ~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  191 (248)
T 3op4_A          112 ETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETD  191 (248)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSST
T ss_pred             HHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCc
Confidence            99999999999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +................|.+|++.|||++++.  +|++++...+++|
T Consensus       192 ~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v--~~L~s~~~~~itG  236 (248)
T 3op4_A          192 MTKALNDEQRTATLAQVPAGRLGDPREIASAV--AFLASPEAAYITG  236 (248)
T ss_dssp             TTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             hhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHcCCccCCccC
Confidence            87754332222223345889999999999975  4677777777666

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=8.8e-43  Score=340.88  Aligned_cols=239  Identities=21%  Similarity=0.297  Sum_probs=211.9

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +|++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.                       .
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------~   60 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-----------------------G   60 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-----------------------S
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----------------------C
Confidence            46789999999999999999999999999999999999999999999888876542                       4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++
T Consensus        61 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~~  118 (262)
T 3pk0_A           61 KVIGVQTDVS-DRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGI---------------------FAV  118 (262)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHH
T ss_pred             cEEEEEcCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHH
Confidence            6889999999 999999999999999999999999999988888999999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      |+.|+++++++++|.|++++.|+||++||..+. .+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       119 N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  198 (262)
T 3pk0_A          119 NVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG  198 (262)
T ss_dssp             HTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             hhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence            999999999999999999888999999999986 7889999999999999999999999999999999999999999997


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ................+++|++.|||+|++.  +|++++...+++|-
T Consensus       199 ~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v--~~L~s~~~~~itG~  243 (262)
T 3pk0_A          199 LLENGEEYIASMARSIPAGALGTPEDIGHLA--AFLATKEAGYITGQ  243 (262)
T ss_dssp             HHTTCHHHHHHHHTTSTTSSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             ccccCHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCccccCCcCC
Confidence            6543322222222345889999999999875  46777777777763

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.1e-42  Score=338.63  Aligned_cols=239  Identities=22%  Similarity=0.254  Sum_probs=211.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+.                      .+
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----------------------~~   60 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG----------------------AR   60 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT----------------------CC
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC----------------------ce
Confidence            36789999999999999999999999999999999999999999999888774431                      35


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|
T Consensus        61 ~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~~N  118 (265)
T 3lf2_A           61 LFASVCDVL-DALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEE---------------------LQLK  118 (265)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHH
T ss_pred             EEEEeCCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            889999999 999999999999999999999999999988888999999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|+++++++++|.|++++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus       119 ~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (265)
T 3lf2_A          119 FFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWR  198 (265)
T ss_dssp             HHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhh
Confidence            99999999999999999888999999999999999999999999999999999999999999999999999999999866


Q ss_pred             ccccCCcc-------cc-----ccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPR-------ET-----SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~-------~~-----~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ........       ..     ....|++|+++|||+|++.  +||+++..++++|-
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~fL~s~~~~~itG~  253 (265)
T 3lf2_A          199 RRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAI--LFLASPLSAYTTGS  253 (265)
T ss_dssp             HHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHH--HHHHSGGGTTCCSE
T ss_pred             hhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHH--HHHhCchhcCcCCC
Confidence            43321110       00     0116889999999999885  46777777777773

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.1e-42  Score=337.01  Aligned_cols=236  Identities=22%  Similarity=0.307  Sum_probs=209.4

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~   61 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG------------------------G   61 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT------------------------C
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------C
Confidence            4577899999999999999999999999999999999999999999988887654                        5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+....++ +.+.++|+.+                     +++
T Consensus        62 ~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~---------------------~~v  118 (256)
T 3gaf_A           62 KAIGLECNVT-DEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWA---------------------FKL  118 (256)
T ss_dssp             CEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT-TCCHHHHHHH---------------------HHH
T ss_pred             cEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHH---------------------HHH
Confidence            6889999999 9999999999999999999999999999877777 8899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       119 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  198 (256)
T 3gaf_A          119 NLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDAL  198 (256)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred             HhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchh
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999986


Q ss_pred             cccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ....... ........|++|++.|||++++.  +|++++...+++|
T Consensus       199 ~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~--~~L~s~~~~~itG  242 (256)
T 3gaf_A          199 ATVLTPEIERAMLKHTPLGRLGEAQDIANAA--LFLCSPAAAWISG  242 (256)
T ss_dssp             HHHCCHHHHHHHHTTCTTSSCBCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             hhccCHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHcCCcccCccC
Confidence            5432111 11122245889999999999975  4566776677666

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.3e-42  Score=337.95  Aligned_cols=242  Identities=23%  Similarity=0.263  Sum_probs=205.1

Q ss_pred             ccccccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCC
Q psy3252          87 HLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPN  166 (475)
Q Consensus        87 ~~~~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  166 (475)
                      ++....++++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                    
T Consensus        17 ~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--------------------   76 (283)
T 3v8b_A           17 NLYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--------------------   76 (283)
T ss_dssp             ----------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--------------------
T ss_pred             hhhhhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--------------------
Confidence            344556788999999999999999999999999999999999999999999888876543                    


Q ss_pred             CCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhcccc
Q psy3252         167 PKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS  245 (475)
Q Consensus       167 ~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (475)
                          .++.++.+|++ |.++++++++++.+++|++|+||||||+... .++.+.+.++|+.+                  
T Consensus        77 ----~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~------------------  133 (283)
T 3v8b_A           77 ----GQAIALEADVS-DELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET------------------  133 (283)
T ss_dssp             ----CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHH------------------
T ss_pred             ----CcEEEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHH------------------
Confidence                56889999999 9999999999999999999999999998754 78889999999988                  


Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc--cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         246 WTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANL--GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       246 ~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~--~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                         +++|+.|+++++++++|.|++++.|+||++||.++..  +.++...|++||+|+++|+++|+.|++++||+||+|+|
T Consensus       134 ---~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  210 (283)
T 3v8b_A          134 ---IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCP  210 (283)
T ss_dssp             ---HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEE
T ss_pred             ---HHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEe
Confidence               9999999999999999999998889999999999987  77889999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCcc-------cccccccc--CCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         324 PDTDTPGFENEEKSKPR-------ETSLISQT--GGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       324 G~v~T~~~~~~~~~~~~-------~~~~~~~~--~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+|+|++..........       ......|+  +|++.|||||++.  +|++++...+++|
T Consensus       211 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v--~fL~s~~a~~itG  270 (283)
T 3v8b_A          211 GAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELI--RFLVSERARHVTG  270 (283)
T ss_dssp             CSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHH--HHHTSGGGTTCCS
T ss_pred             CCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHH--HHHcCccccCCcC
Confidence            99999987754322111       11122355  9999999999975  5677777777776

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=3e-42  Score=339.01  Aligned_cols=237  Identities=23%  Similarity=0.222  Sum_probs=212.0

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~   75 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG------------------------H   75 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT------------------------C
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------C
Confidence            3578999999999999999999999999999999999999999999998887654                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     +++
T Consensus        76 ~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~v  133 (271)
T 4ibo_A           76 DAEAVAFDVT-SESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRV---------------------IDT  133 (271)
T ss_dssp             CEEECCCCTT-CHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             ceEEEEcCCC-CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHH---------------------HHH
Confidence            6888999999 999999999999999999999999999988888999999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       134 N~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  213 (271)
T 4ibo_A          134 NLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMN  213 (271)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             HhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcch
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........  .......|++|++.|||++++.+  |++++...+++|
T Consensus       214 ~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~--~L~s~~~~~itG  258 (271)
T 4ibo_A          214 QALIDNPEFDAWVKARTPAKRWGKPQELVGTAV--FLSASASDYVNG  258 (271)
T ss_dssp             HHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHH--HHHSGGGTTCCS
T ss_pred             hhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCccccCCCC
Confidence            65432111  11223458899999999998754  567777777766

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=3e-42  Score=337.85  Aligned_cols=240  Identities=21%  Similarity=0.205  Sum_probs=211.5

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      ...+++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+                      
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------------------   69 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG----------------------   69 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----------------------
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----------------------
Confidence            3456789999999999999999999999999999999999999999998888876322                      


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +
T Consensus        70 -~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~  126 (266)
T 4egf_A           70 -TDVHTVAIDLA-EPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDAT---------------------I  126 (266)
T ss_dssp             -CCEEEEECCTT-STTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHH---------------------H
T ss_pred             -CcEEEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------H
Confidence             56889999999 999999999999999999999999999988888999999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.|+++++++++|.|.+++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       127 ~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T  206 (266)
T 4egf_A          127 AVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLT  206 (266)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCS
T ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcC
Confidence            9999999999999999998866 689999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++..........  ......|++|++.|||||++.+  |++++...+++|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~--~L~s~~~~~itG  254 (266)
T 4egf_A          207 EMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVV--WLASDAASMING  254 (266)
T ss_dssp             HHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             chhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCccC
Confidence            976543221111  1122358899999999999854  677777777776

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.9e-42  Score=338.97  Aligned_cols=235  Identities=24%  Similarity=0.282  Sum_probs=209.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+                        .++
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~   79 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG------------------------LEG   79 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT------------------------CCC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcE
Confidence            45789999999999999999999999999999999999999999988887654                        456


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+
T Consensus        80 ~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~vN~  137 (270)
T 3ftp_A           80 RGAVLNVN-DATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAV---------------------IDTNL  137 (270)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEEeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhh
Confidence            78999999 999999999999999999999999999988888889999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       138 ~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  217 (270)
T 3ftp_A          138 KAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG  217 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh
Confidence            99999999999999988889999999999999999999999999999999999999999999999999999999998664


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .............+++|++.|||+|++.  +|++++...+++|
T Consensus       218 ~~~~~~~~~~~~~p~~r~~~pedvA~~v--~~L~s~~~~~itG  258 (270)
T 3ftp_A          218 LPQEQQTALKTQIPLGRLGSPEDIAHAV--AFLASPQAGYITG  258 (270)
T ss_dssp             SCHHHHHHHHTTCTTCSCBCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             cCHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHhCCCcCCccC
Confidence            4322222223345789999999999975  4566766666666

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=7.3e-42  Score=337.02  Aligned_cols=239  Identities=21%  Similarity=0.227  Sum_probs=209.1

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .+..++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+                       .
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~   77 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-----------------------R   77 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-----------------------S
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----------------------C
Confidence            34568899999999999999999999999999999999999999888888765422                       5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++
T Consensus        78 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~  135 (277)
T 4fc7_A           78 RCLPLSMDVR-APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTV---------------------MDI  135 (277)
T ss_dssp             CEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             cEEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            6889999999 999999999999999999999999999988888899999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       136 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  215 (277)
T 4fc7_A          136 DTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEG  215 (277)
T ss_dssp             HTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHH
T ss_pred             hhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchh
Confidence            99999999999999998877899999999999999999999999999999999999999999999999999999999864


Q ss_pred             cccccCCc---cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         332 ENEEKSKP---RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       332 ~~~~~~~~---~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ........   .......|++|+++|||||++.+  ||+++..++++|-
T Consensus       216 ~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~--fL~s~~~~~itG~  262 (277)
T 4fc7_A          216 LRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL--YLASPLASYVTGA  262 (277)
T ss_dssp             HHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCSC
T ss_pred             hhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHH--HHcCCccCCcCCC
Confidence            32211111   11222458899999999998854  5677777777763

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=5e-42  Score=341.36  Aligned_cols=240  Identities=25%  Similarity=0.335  Sum_probs=212.0

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ..+++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.++                       
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------   90 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-----------------------   90 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-----------------------
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-----------------------
Confidence            446789999999999999999999999999999999999999999988888865432                       


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     ++
T Consensus        91 ~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~  148 (293)
T 3rih_A           91 GNVIGVRLDVS-DPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEV---------------------LD  148 (293)
T ss_dssp             SCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HH
T ss_pred             CcEEEEEEeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HH
Confidence            46889999999 999999999999999999999999999988888899999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|+++++++++|.|++++.|+||++||..+. .+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       149 vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~  228 (293)
T 3rih_A          149 VNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTE  228 (293)
T ss_dssp             HHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred             HHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCc
Confidence            9999999999999999999888999999999986 788999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +................|++|++.|||++++.  +|++++...+++|-
T Consensus       229 ~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v--~fL~s~~a~~itG~  274 (293)
T 3rih_A          229 GLVDMGEEYISGMARSIPMGMLGSPVDIGHLA--AFLATDEAGYITGQ  274 (293)
T ss_dssp             HHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             chhhccHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHhCccccCCCCC
Confidence            76543322112222345889999999999875  56777777777763

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=8.2e-42  Score=331.14  Aligned_cols=231  Identities=24%  Similarity=0.301  Sum_probs=205.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        .++.
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~~~   55 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---G------------------------KKAR   55 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C------------------------TTEE
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C------------------------CceE
Confidence            578999999999999999999999999999999999999888877665   1                        4578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     +++|+.
T Consensus        56 ~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~  113 (247)
T 3rwb_A           56 AIAADIS-DPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKI---------------------IDVNLT  113 (247)
T ss_dssp             ECCCCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhhH
Confidence            8999999 999999999999999999999999999988888999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         255 GTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      |+++++++++|.|++++ .|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       114 g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  193 (247)
T 3rwb_A          114 GTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKA  193 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccc
Confidence            99999999999999876 69999999999999999999999999999999999999999999999999999999997765


Q ss_pred             cccCCccccc-cccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPRETS-LISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~~~~-~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......... ...+++|.+.|||++++.  +|++++..++++|
T Consensus       194 ~~~~~~~~~~~~~~~~~r~~~pedva~~v--~~L~s~~~~~itG  235 (247)
T 3rwb_A          194 SPHNEAFGFVEMLQAMKGKGQPEHIADVV--SFLASDDARWITG  235 (247)
T ss_dssp             SGGGGGHHHHHHHSSSCSCBCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             cChhHHHHHHhcccccCCCcCHHHHHHHH--HHHhCccccCCCC
Confidence            4332222111 226789999999999975  4677777777776

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=3.6e-42  Score=337.60  Aligned_cols=235  Identities=22%  Similarity=0.256  Sum_probs=197.3

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ..+++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        
T Consensus        20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~------------------------   72 (266)
T 3grp_A           20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---G------------------------   72 (266)
T ss_dssp             -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C------------------------
T ss_pred             cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C------------------------
Confidence            4567899999999999999999999999999999999999998888776544   1                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     ++
T Consensus        73 ~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~  130 (266)
T 3grp_A           73 KDVFVFSANLS-DRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDV---------------------LA  130 (266)
T ss_dssp             SSEEEEECCTT-SHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHH---------------------HH
T ss_pred             CceEEEEeecC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HH
Confidence            46889999999 999999999999999999999999999988788888999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       131 vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~  210 (266)
T 3grp_A          131 VNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM  210 (266)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence            99999999999999999988889999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ................|++|++.|||+|++.+  |++++..++++|
T Consensus       211 ~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~--~L~s~~~~~itG  254 (266)
T 3grp_A          211 TDKLNEKQKEAIMAMIPMKRMGIGEEIAFATV--YLASDEAAYLTG  254 (266)
T ss_dssp             HHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhccCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCccccCccC
Confidence            76543222222233468899999999998754  677777777766

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=7e-41  Score=334.10  Aligned_cols=250  Identities=26%  Similarity=0.350  Sum_probs=209.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~   82 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG------------------------FDA   82 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCE
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------Cce
Confidence            45899999999999999999999999999999999999999999998887654                        568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+...+++.+.+.++++.+                     +++|+
T Consensus        83 ~~~~~Dv~-d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~vN~  140 (301)
T 3tjr_A           83 HGVVCDVR-HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWV---------------------IDIDL  140 (301)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHhhh
Confidence            89999999 999999999999999999999999999998888999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++++++|.|.+++ .|+||++||.++..+.++.+.|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus       141 ~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  220 (301)
T 3tjr_A          141 WGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS  220 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc
Confidence            999999999999999876 6899999999999999999999999999999999999999999999999999999999765


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~  412 (475)
                      ...........      ....|..                   .+.           ........++||+||+.++++++
T Consensus       221 ~~~~~~~~~~~------~~~~~~~-------------------~~~-----------~~~~~~~~~~pedvA~~i~~~l~  264 (301)
T 3tjr_A          221 NSERIRGADYG------MSATPEG-------------------AFG-----------PLPTQDESVSADDVARLTADAIL  264 (301)
T ss_dssp             HHHHHC----------------------------------------------------------CCCHHHHHHHHHHHHH
T ss_pred             ccccccchhhc------cccChhh-------------------hcc-----------ccccccCCCCHHHHHHHHHHHHh
Confidence            43211100000      0000000                   000           00111236899999999999999


Q ss_pred             cCCeeEEeCchhH
Q psy3252         413 KGNYFSTVGLESY  425 (475)
Q Consensus       413 ~g~~~~~~~~~~~  425 (475)
                      +++..+++|...+
T Consensus       265 ~~~~~i~~g~~~~  277 (301)
T 3tjr_A          265 ANRLYILPHAAAR  277 (301)
T ss_dssp             HTCSEECCCTTHH
T ss_pred             cCCeEEecCHHHH
Confidence            9999888886544

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.6e-41  Score=329.83  Aligned_cols=233  Identities=20%  Similarity=0.222  Sum_probs=207.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +||++|||||++|||+++|++|+++|++|+++ +|+.+.++++.+++.+.+                        .++.+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~   58 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG------------------------VKVLV   58 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT------------------------CCEEE
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------CcEEE
Confidence            58999999999999999999999999999996 899999998888886543                        56889


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.|
T Consensus        59 ~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~vN~~g  116 (258)
T 3oid_A           59 VKANVG-QPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWT---------------------MNINAKA  116 (258)
T ss_dssp             EECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHH---------------------HHHHTHH
T ss_pred             EEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhHH
Confidence            999999 999999999999999999999999999988888999999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      +++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.....
T Consensus       117 ~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          117 LLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc
Confidence            99999999999999888999999999999999999999999999999999999999999999999999999999876543


Q ss_pred             cCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         336 KSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       336 ~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ....  .......|++|++.|||++++.+  |++++...+++|-
T Consensus       197 ~~~~~~~~~~~~~p~~r~~~~~dva~~v~--~L~s~~~~~itG~  238 (258)
T 3oid_A          197 NREDLLEDARQNTPAGRMVEIKDMVDTVE--FLVSSKADMIRGQ  238 (258)
T ss_dssp             THHHHHHHHHHHCTTSSCBCHHHHHHHHH--HHTSSTTTTCCSC
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCcccCCccCC
Confidence            2211  11122458899999999999854  6777777777763

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3.2e-41  Score=328.70  Aligned_cols=234  Identities=23%  Similarity=0.287  Sum_probs=203.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++.
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   58 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP------------------------GQIL   58 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST------------------------TCEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            4679999999999999999999999999999999999999998888775432                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.
T Consensus        59 ~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~n~~  116 (257)
T 3imf_A           59 TVQMDVR-NTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSV---------------------INIVLN  116 (257)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHHH
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhH
Confidence            9999999 999999999999999999999999999988888999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHH-hCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc-cCCcEEEEEeCCCCCCCCCc
Q psy3252         255 GTIHMTKALVEGMK-QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK-QSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       255 g~~~l~~~~lp~m~-~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~-~~gIrVn~V~PG~v~T~~~~  332 (475)
                      |+++++++++|.|. +++.|+||++||..+..+.++...|++||+|+++|+++|+.|++ ++||+||+|+||+|+|++..
T Consensus       117 g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~  196 (257)
T 3imf_A          117 GTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGA  196 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC
T ss_pred             HHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcch
Confidence            99999999999995 44579999999999999999999999999999999999999998 78999999999999999765


Q ss_pred             ccccC---CccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKS---KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~---~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....   .........|++|++.|||+|++.+  |++++...+++|
T Consensus       197 ~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~--~L~s~~~~~itG  241 (257)
T 3imf_A          197 DKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAY--YLCSDEAAYING  241 (257)
T ss_dssp             -------CCSHHHHTTSTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHcCchhcCccC
Confidence            43211   1112222457899999999998754  566777777666

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2.2e-41  Score=327.66  Aligned_cols=233  Identities=20%  Similarity=0.244  Sum_probs=206.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +.+|++|||||++|||+++|++|+++|++|+++++ +.+.++++.+++...+                        .++.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~   57 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG------------------------VDSF   57 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------SCEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            45899999999999999999999999999999877 5677888888877654                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.
T Consensus        58 ~~~~Dv~-d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~vN~~  115 (246)
T 3osu_A           58 AIQANVA-DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDV---------------------IDTNLK  115 (246)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhhH
Confidence            8999999 999999999999999999999999999988888889999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus       116 g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  195 (246)
T 3osu_A          116 GVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL  195 (246)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc
Confidence            99999999999999888899999999999999999999999999999999999999999999999999999999987654


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ............|++|++.|||++++.+  |++++...+++|
T Consensus       196 ~~~~~~~~~~~~p~~r~~~~~dva~~v~--~l~s~~~~~itG  235 (246)
T 3osu_A          196 SDELKEQMLTQIPLARFGQDTDIANTVA--FLASDKAKYITG  235 (246)
T ss_dssp             CHHHHHHHHTTCTTCSCBCHHHHHHHHH--HHTSGGGTTCCS
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCccccCCCC
Confidence            3322222223458899999999999864  566766666665

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.5e-41  Score=327.76  Aligned_cols=223  Identities=23%  Similarity=0.274  Sum_probs=184.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~   58 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG------------------------GRI   58 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------------------------CEE
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CeE
Confidence            46789999999999999999999999999999999999999999999887754                        578


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.++ |++|+||||||+....++.+.+.++++.+                     +++|+
T Consensus        59 ~~~~~Dv~-~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~  115 (252)
T 3h7a_A           59 VARSLDAR-NEDEVTAFLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKV---------------------WEMAC  115 (252)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEECcCC-CHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHHh
Confidence            99999999 999999999999999 99999999999988888999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEE-EEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI-TLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV-n~V~PG~v~T~~~~  332 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+| |+|+||+|+|++..
T Consensus       116 ~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~  195 (252)
T 3h7a_A          116 WAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR  195 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhh
Confidence            99999999999999998889999999999999999999999999999999999999999999999 99999999999887


Q ss_pred             ccccCCccccccccccCCCCChHHhhhcccee
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      ..............+.+ +..|||+|++.+.+
T Consensus       196 ~~~~~~~~~~~~~~~~~-~~~pedvA~~~~~l  226 (252)
T 3h7a_A          196 ERREQMFGKDALANPDL-LMPPAAVAGAYWQL  226 (252)
T ss_dssp             -------------------CCHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhcCCcc-CCCHHHHHHHHHHH
Confidence            65433322222334556 99999999986543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.2e-41  Score=331.77  Aligned_cols=238  Identities=22%  Similarity=0.264  Sum_probs=209.7

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ..+++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        
T Consensus        25 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------   80 (276)
T 3r1i_A           25 LDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG------------------------   80 (276)
T ss_dssp             GGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------------------------
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------
Confidence            35678999999999999999999999999999999999999999999998887654                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     ++
T Consensus        81 ~~~~~~~~Dl~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~  138 (276)
T 3r1i_A           81 GKALPIRCDVT-QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRI---------------------QD  138 (276)
T ss_dssp             CCCEEEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HH
T ss_pred             CeEEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HH
Confidence            45778999999 999999999999999999999999999988888899999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCC-CeEEEeccccccccC--CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGR-GCIVITASQAANLGI--YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~-g~IV~iSS~a~~~~~--~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +|+.|+++++++++|.|.+++. |+||++||..+..+.  ++...|++||+|+++|+++|+.|++++||+||+|+||+|+
T Consensus       139 ~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~  218 (276)
T 3r1i_A          139 TNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIR  218 (276)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence            9999999999999999998764 899999999988764  3678999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         328 TPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       328 T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      |++...... .........+++|++.|||+|++.  +|++++...+++|-
T Consensus       219 T~~~~~~~~-~~~~~~~~~p~~r~~~pedvA~~v--~fL~s~~~~~itG~  265 (276)
T 3r1i_A          219 TELVEPLAD-YHALWEPKIPLGRMGRPEELTGLY--LYLASAASSYMTGS  265 (276)
T ss_dssp             STTTGGGGG-GHHHHGGGSTTSSCBCGGGSHHHH--HHHHSGGGTTCCSC
T ss_pred             CCccccchH-HHHHHHhcCCCCCCcCHHHHHHHH--HHHcCccccCccCc
Confidence            998875432 112223345889999999999875  56777777777763

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-41  Score=329.89  Aligned_cols=234  Identities=21%  Similarity=0.274  Sum_probs=203.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-------------ChhHHHHHHHHHHHhCCCCcchhhhhHHHh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-------------DEKKLLQAQEEIKKACPNPKFIRFIEYEEI  160 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-------------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  160 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|             +.+.++++.+++...+              
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------   72 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--------------   72 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--------------
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--------------
Confidence            4678999999999999999999999999999999998             6777888777776544              


Q ss_pred             hhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchh
Q psy3252         161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRL  240 (475)
Q Consensus       161 ~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (475)
                                .++.++.+|++ |.++++++++++.+++|+||+||||||+....++.+.+.++|+.+             
T Consensus        73 ----------~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~-------------  128 (277)
T 3tsc_A           73 ----------RRIVAAVVDTR-DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV-------------  128 (277)
T ss_dssp             ----------CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH-------------
T ss_pred             ----------CeEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH-------------
Confidence                      56889999999 999999999999999999999999999988888899999999988             


Q ss_pred             hccccchhhhhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         241 ALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       241 ~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                              +++|+.|+++++++++|.|.+++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||
T Consensus       129 --------~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn  200 (277)
T 3tsc_A          129 --------MDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVN  200 (277)
T ss_dssp             --------HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             --------HHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence                    99999999999999999998875 689999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCccccc--------CCccc---cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         320 LCLPPDTDTPGFENEEK--------SKPRE---TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       320 ~V~PG~v~T~~~~~~~~--------~~~~~---~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|+||+|+|++......        ..+..   .....+. |++.|||+|++.  +||+++...+++|
T Consensus       201 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA~~v--~~L~s~~~~~itG  265 (277)
T 3tsc_A          201 SVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIADTV--CWLASDESRKVTA  265 (277)
T ss_dssp             EEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             EEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCHHHHHHHH--HHHhCccccCCcC
Confidence            99999999998654110        01111   1112233 799999999885  4677777777776

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=8.6e-41  Score=329.56  Aligned_cols=236  Identities=23%  Similarity=0.297  Sum_probs=204.0

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-------------ChhHHHHHHHHHHHhCCCCcchhhhhHH
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-------------DEKKLLQAQEEIKKACPNPKFIRFIEYE  158 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-------------~~~~l~~~~~~l~~~~~~~~~~~~~~~~  158 (475)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|             +.++++++.+++...+            
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------   76 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG------------   76 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT------------
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC------------
Confidence            456789999999999999999999999999999999998             6788888887776543            


Q ss_pred             HhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccc
Q psy3252         159 EIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHT  238 (475)
Q Consensus       159 ~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (475)
                                  .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++           
T Consensus        77 ------------~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~-----------  132 (280)
T 3pgx_A           77 ------------RKALTRVLDVR-DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV-----------  132 (280)
T ss_dssp             ------------CCEEEEECCTT-CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHH-----------
T ss_pred             ------------CeEEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH-----------
Confidence                        56889999999 999999999999999999999999999988888999999999988           


Q ss_pred             hhhccccchhhhhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcE
Q psy3252         239 RLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT  317 (475)
Q Consensus       239 ~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIr  317 (475)
                                +++|+.|+++++++++|.|++++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+
T Consensus       133 ----------~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  202 (280)
T 3pgx_A          133 ----------IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIR  202 (280)
T ss_dssp             ----------HHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             ----------HhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence                      99999999999999999998875 7999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCCCCCCccccc-----CCccc-----cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         318 ITLCLPPDTDTPGFENEEK-----SKPRE-----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       318 Vn~V~PG~v~T~~~~~~~~-----~~~~~-----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ||+|+||+|+|++......     ..+..     .....+. |++.|||||++.  +|++++..++++|
T Consensus       203 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~dvA~~v--~~L~s~~~~~itG  268 (280)
T 3pgx_A          203 VNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMTADEVADVV--AWLAGDGSGTLTG  268 (280)
T ss_dssp             EEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBCHHHHHHHH--HHHHSGGGTTCSS
T ss_pred             EEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCCHHHHHHHH--HHHhCccccCCCC
Confidence            9999999999998764210     00110     1112234 789999999885  4677777777766

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=6.5e-41  Score=330.46  Aligned_cols=237  Identities=26%  Similarity=0.349  Sum_probs=203.5

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------hhHHHHHHHHHHHhCCCCcchhhhhHHH
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD------------EKKLLQAQEEIKKACPNPKFIRFIEYEE  159 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~  159 (475)
                      +|.+++||++|||||++|||+++|++|+++|++|++++|+            .+.++++.+++...+             
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   70 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-------------   70 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-------------
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC-------------
Confidence            4567899999999999999999999999999999999997            666777777666543             


Q ss_pred             hhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccch
Q psy3252         160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTR  239 (475)
Q Consensus       160 ~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (475)
                                 .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+            
T Consensus        71 -----------~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~------------  126 (281)
T 3s55_A           71 -----------RRCISAKVDVK-DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEV------------  126 (281)
T ss_dssp             -----------CCEEEEECCTT-CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHH------------
T ss_pred             -----------CeEEEEeCCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHH------------
Confidence                       56889999999 999999999999999999999999999988888899999999988            


Q ss_pred             hhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         240 LALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       240 ~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                               +++|+.|+++++++++|.|++++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||
T Consensus       127 ---------~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn  197 (281)
T 3s55_A          127 ---------IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVN  197 (281)
T ss_dssp             ---------HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred             ---------HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence                     99999999999999999999888899999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCcccc------cC--Cccc---c----ccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         320 LCLPPDTDTPGFENEE------KS--KPRE---T----SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       320 ~V~PG~v~T~~~~~~~------~~--~~~~---~----~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|+||+|+||+.....      ..  .+..   .    ......+|++.|||||++.+  |++++..++++|
T Consensus       198 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~--~L~s~~~~~itG  267 (281)
T 3s55_A          198 AVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVL--FLVDEASSHITG  267 (281)
T ss_dssp             EEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             EEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHH--HHcCCcccCCCC
Confidence            9999999999876421      00  0000   0    01112278999999999854  566776677666

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=4.4e-41  Score=330.29  Aligned_cols=233  Identities=24%  Similarity=0.258  Sum_probs=206.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.+.+                        .
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------------------------~   78 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG------------------------G   78 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------C
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC------------------------C
Confidence            36789999999999999999999999999999999988 7777888888777653                        5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++
T Consensus        79 ~~~~~~~D~~-d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~v  136 (269)
T 4dmm_A           79 EAFAVKADVS-QESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSV---------------------LDL  136 (269)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             cEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            6889999999 999999999999999999999999999988888899999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       137 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (269)
T 4dmm_A          137 NLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMT  216 (269)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCS
T ss_pred             HhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccc
Confidence            99999999999999999888899999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCC-CCCCCCC
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLP-PDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~-~~~~~~g  376 (475)
                      .....   .......+++|++.|||||++.+  |++++ ...+++|
T Consensus       217 ~~~~~---~~~~~~~p~~r~~~~~dvA~~v~--~l~s~~~~~~itG  257 (269)
T 4dmm_A          217 SELAA---EKLLEVIPLGRYGEAAEVAGVVR--FLAADPAAAYITG  257 (269)
T ss_dssp             CHHHH---HHHGGGCTTSSCBCHHHHHHHHH--HHHHCGGGGGCCS
T ss_pred             ccccH---HHHHhcCCCCCCCCHHHHHHHHH--HHhCCcccCCCcC
Confidence            65432   22223458899999999998754  45554 4455555

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=4e-41  Score=332.65  Aligned_cols=236  Identities=26%  Similarity=0.338  Sum_probs=206.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .+
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~   58 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG------------------------GE   58 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT------------------------CC
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------Cc
Confidence            346889999999999999999999999999999999999999998888875433                        56


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+. ...++.+.+.++++.+                     +++
T Consensus        59 ~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~---------------------~~v  116 (280)
T 3tox_A           59 AAALAGDVG-DEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRET---------------------LDT  116 (280)
T ss_dssp             EEECCCCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHH---------------------HHH
T ss_pred             EEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHH---------------------HHH
Confidence            889999999 99999999999999999999999999987 4478889999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      |+.|+++++++++|.|.+++.|+||++||..+. .+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       117 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  196 (280)
T 3tox_A          117 NLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA  196 (280)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred             HhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence            999999999999999999888999999999998 7889999999999999999999999999999999999999999998


Q ss_pred             Cccccc-CCcc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEK-SKPR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~-~~~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...... ..+.   ......+++|++.|||||++.+  |++++..++++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~--~L~s~~a~~itG  244 (280)
T 3tox_A          197 NFANLPGAAPETRGFVEGLHALKRIARPEEIAEAAL--YLASDGASFVTG  244 (280)
T ss_dssp             SGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHH--HHhCccccCCcC
Confidence            765221 1111   1122457899999999999865  566777677766

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.8e-41  Score=331.31  Aligned_cols=236  Identities=18%  Similarity=0.223  Sum_probs=187.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++...+                        .
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------------------------~   79 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG------------------------A   79 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT------------------------C
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC------------------------C
Confidence            34688999999999999999999999999999999995 7888888888887654                        5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc--ccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM--ALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+  ....++.+.+.++|+.+                     +
T Consensus        80 ~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~---------------------~  137 (280)
T 4da9_A           80 RVIFLRADLA-DLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTI---------------------V  137 (280)
T ss_dssp             CEEEEECCTT-SGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHH---------------------T
T ss_pred             cEEEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHH---------------------H
Confidence            6889999999 9999999999999999999999999998  44578889999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCC---CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRG---RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++|+.|+++++++++|.|++++   .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|
T Consensus       138 ~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  217 (280)
T 4da9_A          138 GVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGII  217 (280)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB
T ss_pred             HHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCC
Confidence            9999999999999999998865   6899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCcccccc-ccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         327 DTPGFENEEKSKPRETSL-ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       327 ~T~~~~~~~~~~~~~~~~-~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|++.............. ..|++|++.|||||++.  +|++++...+++|
T Consensus       218 ~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~~L~s~~~~~itG  266 (280)
T 4da9_A          218 RSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIV--AGLAGGQFGFATG  266 (280)
T ss_dssp             CC----------------------CCBCHHHHHHHH--HHHHTSTTGGGTT
T ss_pred             cCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHH--HHHhCccccCCCC
Confidence            999877654332222222 46889999999999874  4677777776666

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.4e-41  Score=330.74  Aligned_cols=237  Identities=23%  Similarity=0.298  Sum_probs=200.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.....                       .
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----------------------~   76 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS-----------------------G   76 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCS-----------------------S
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccC-----------------------C
Confidence            46788999999999999999999999999999999999 67778888777765422                       5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++
T Consensus        77 ~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~v  134 (281)
T 3v2h_A           77 TVLHHPADMT-KPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRI---------------------IAV  134 (281)
T ss_dssp             CEEEECCCTT-CHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             cEEEEeCCCC-CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            6889999999 999999999999999999999999999988888999999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       135 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  214 (281)
T 3v2h_A          135 NLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLV  214 (281)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred             HhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcch
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccccCCc------------cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKP------------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~------------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........            .......+++|++.|||+|++.+  |++++...+++|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~--~L~s~~a~~itG  269 (281)
T 3v2h_A          215 EKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLAL--YLAGDDAAQITG  269 (281)
T ss_dssp             -------------------------CCTTCSCBCHHHHHHHHH--HHHSSGGGGCCS
T ss_pred             hhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH--HHcCCCcCCCCC
Confidence            65432111            01122357899999999998754  566666666665

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=8.3e-41  Score=330.51  Aligned_cols=235  Identities=23%  Similarity=0.310  Sum_probs=202.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC----------------hhHHHHHHHHHHHhCCCCcchhhhhH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD----------------EKKLLQAQEEIKKACPNPKFIRFIEY  157 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~----------------~~~l~~~~~~l~~~~~~~~~~~~~~~  157 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+                .++++++.+++...+           
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   75 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-----------   75 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-----------
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-----------
Confidence            45789999999999999999999999999999999987                677777777766543           


Q ss_pred             HHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC-cccCCHHHHHHhhhhhhhccc
Q psy3252         158 EEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-LEEMTMQDIKVMEQPLWLRGY  236 (475)
Q Consensus       158 ~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~-~~~~~~~~~~~~~~~~~~~~~  236 (475)
                                   .++.++.+|++ |.++++++++++.+++|+||+||||||+..... +.+.+.++|+.+         
T Consensus        76 -------------~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------  132 (286)
T 3uve_A           76 -------------RRIVTAEVDVR-DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEM---------  132 (286)
T ss_dssp             -------------CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHH---------
T ss_pred             -------------CceEEEEcCCC-CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHH---------
Confidence                         56889999999 999999999999999999999999999976654 888999999988         


Q ss_pred             cchhhccccchhhhhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         237 HTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       237 ~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                                  +++|+.|+++++++++|.|.+++ .|+||++||..+..+.++...|++||+|+++|+++|+.|++++|
T Consensus       133 ------------~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g  200 (286)
T 3uve_A          133 ------------IDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHM  200 (286)
T ss_dssp             ------------HHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ------------HHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccC
Confidence                        99999999999999999998865 68999999999999999999999999999999999999999999


Q ss_pred             cEEEEEeCCCCCCCCCccccc----------CCccc------cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         316 LTITLCLPPDTDTPGFENEEK----------SKPRE------TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       316 IrVn~V~PG~v~T~~~~~~~~----------~~~~~------~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      |+||+|+||+|+|++......          .....      .....| +|++.|||||++.  +||+++..++++|-
T Consensus       201 I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v--~fL~s~~a~~itG~  275 (286)
T 3uve_A          201 IRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAV--LFFASDEARYITGV  275 (286)
T ss_dssp             EEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             eEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHH--HHHcCccccCCcCC
Confidence            999999999999998764211          00000      111224 8899999999875  56778777777763

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4.8e-41  Score=327.72  Aligned_cols=233  Identities=21%  Similarity=0.261  Sum_probs=203.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .+
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~   55 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG---------------------------PA   55 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------------------------TT
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------------------------CC
Confidence            346789999999999999999999999999999999999998888776652                           34


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     +++|
T Consensus        56 ~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N  113 (259)
T 4e6p_A           56 AYAVQMDVT-RQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKL---------------------FAIN  113 (259)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHH
T ss_pred             ceEEEeeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            788999999 999999999999999999999999999988888899999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.|+++++++++|.|.+++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       114 ~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  193 (259)
T 4e6p_A          114 VAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHW  193 (259)
T ss_dssp             THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchh
Confidence            9999999999999998865 689999999999999999999999999999999999999999999999999999999986


Q ss_pred             ccccc---------CC--ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEK---------SK--PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~---------~~--~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....         ..  ........|++|++.|||++++.  +|++++...+++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v--~~L~s~~~~~itG  247 (259)
T 4e6p_A          194 DGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMA--IFLASAESDYIVS  247 (259)
T ss_dssp             HHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHH--HHTTSGGGTTCCS
T ss_pred             hhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHH--HHHhCCccCCCCC
Confidence            54310         01  11112235889999999999875  4567777777665

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=6e-41  Score=330.86  Aligned_cols=239  Identities=26%  Similarity=0.256  Sum_probs=208.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+..                     ..+
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------------------~~~   64 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN---------------------GGA   64 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCS---------------------SCE
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC---------------------Cce
Confidence            35788999999999999999999999999999999999999999998888765421                     137


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc-ccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+ ....++.+.+.++|+.+                     +++
T Consensus        65 ~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~v  122 (281)
T 3svt_A           65 IRYEPTDIT-NEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRT---------------------VDL  122 (281)
T ss_dssp             EEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             EEEEeCCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            889999999 9999999999999999999999999998 45578889999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       123 N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  202 (281)
T 3svt_A          123 NVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLV  202 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             hhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcch
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........  .......|++|++.|||++++.+  |++++...+++|
T Consensus       203 ~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~--~l~s~~~~~itG  247 (281)
T 3svt_A          203 AAITESAELSSDYAMCTPLPRQGEVEDVANMAM--FLLSDAASFVTG  247 (281)
T ss_dssp             HHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHH--HHhCcccCCCCC
Confidence            65422211  11223458899999999999864  566666666665

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.6e-41  Score=331.61  Aligned_cols=235  Identities=24%  Similarity=0.297  Sum_probs=205.4

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .+.++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +                        
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------   72 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---G------------------------   72 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C------------------------
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C------------------------
Confidence            4457889999999999999999999999999999999999998888777654   1                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     ++
T Consensus        73 ~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~  130 (277)
T 4dqx_A           73 SKAFGVRVDVS-SAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRI---------------------MS  130 (277)
T ss_dssp             TTEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHH---------------------HH
T ss_pred             CceEEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HH
Confidence            45788999999 999999999999999999999999999988888899999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       131 vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  210 (277)
T 4dqx_A          131 VNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY  210 (277)
T ss_dssp             HHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence            99999999999999999998889999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcccccCCccc------cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSKPRE------TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~~~------~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +..........      .....+++|++.|||+|++.+  +++++...+++|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~--~L~s~~~~~itG  260 (277)
T 4dqx_A          211 FTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAML--FLASDRSRFATG  260 (277)
T ss_dssp             HHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHH--HHhCCccCCCcC
Confidence            44322111111      223457899999999999854  566666666666

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=5.7e-41  Score=328.23  Aligned_cols=233  Identities=18%  Similarity=0.250  Sum_probs=205.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++.
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   63 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG------------------------RRAL   63 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCEE
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            4689999999999999999999999999999999999999999998887654                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+. ...++.+.+.++|+++                     +++|+
T Consensus        64 ~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~N~  121 (264)
T 3ucx_A           64 SVGTDIT-DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDA---------------------IELTV  121 (264)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHH---------------------HHHHh
Confidence            9999999 99999999999999999999999999985 5578889999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|.+++ |+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       122 ~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  200 (264)
T 3ucx_A          122 FGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS  200 (264)
T ss_dssp             HHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHH
Confidence            999999999999998865 9999999999999999999999999999999999999999999999999999999998654


Q ss_pred             cccCC-----------ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSK-----------PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~-----------~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....           ........+++|++.|||||++.  +|++++..++++|
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v--~~L~s~~~~~itG  252 (264)
T 3ucx_A          201 YFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAI--LFMASDLASGITG  252 (264)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             HHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHH--HHHcCccccCCCC
Confidence            32110           01112245889999999999975  4677777777766

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.5e-40  Score=331.22  Aligned_cols=235  Identities=21%  Similarity=0.307  Sum_probs=203.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------hhHHHHHHHHHHHhCCCCcchhhhhHHHhh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD------------EKKLLQAQEEIKKACPNPKFIRFIEYEEIK  161 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .++++++.+++...+               
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------   88 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG---------------   88 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---------------
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC---------------
Confidence            46889999999999999999999999999999999987            777888887776654               


Q ss_pred             hcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC-cccCCHHHHHHhhhhhhhccccchh
Q psy3252         162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-LEEMTMQDIKVMEQPLWLRGYHTRL  240 (475)
Q Consensus       162 ~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  240 (475)
                               .++.++.+|++ |.++++++++++.+++|+||+||||||+..... +.+.+.++|+.+             
T Consensus        89 ---------~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~-------------  145 (299)
T 3t7c_A           89 ---------RRIIASQVDVR-DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM-------------  145 (299)
T ss_dssp             ---------CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHH-------------
T ss_pred             ---------CceEEEECCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHH-------------
Confidence                     56889999999 999999999999999999999999999886654 888999999988             


Q ss_pred             hccccchhhhhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         241 ALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       241 ~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                              +++|+.|+++++++++|.|.+++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||
T Consensus       146 --------~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  217 (299)
T 3t7c_A          146 --------IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVN  217 (299)
T ss_dssp             --------HHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             --------HHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence                    99999999999999999998765 689999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCcccccC--------Cccc--------cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         320 LCLPPDTDTPGFENEEKS--------KPRE--------TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       320 ~V~PG~v~T~~~~~~~~~--------~~~~--------~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +|+||+|+|++.......        .+..        .....+ +|++.|||||++.  +||+++...+++|-
T Consensus       218 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v--~fL~s~~a~~itG~  288 (299)
T 3t7c_A          218 IVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAI--LFLVSDDARYITGV  288 (299)
T ss_dssp             EEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             EEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHH--HHHhCcccccCcCC
Confidence            999999999987642110        0000        111123 7899999999975  46777777777763

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.6e-41  Score=332.49  Aligned_cols=233  Identities=29%  Similarity=0.360  Sum_probs=204.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++.+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~~~   77 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG------------------------HDVDG   77 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------------------------CCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcEEE
Confidence            468999999999999999999999999999999999999999988887643                        56889


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.|
T Consensus        78 ~~~Dv~-d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~vN~~g  135 (279)
T 3sju_A           78 SSCDVT-STDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADV---------------------LDTNLTG  135 (279)
T ss_dssp             EECCTT-CHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHH---------------------HHHHTHH
T ss_pred             EECCCC-CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhHH
Confidence            999999 999999999999999999999999999988888999999999988                     9999999


Q ss_pred             HHHHHHHHHH--HHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         256 TIHMTKALVE--GMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       256 ~~~l~~~~lp--~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      +++++++++|  .|.+++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       136 ~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (279)
T 3sju_A          136 VFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAER  215 (279)
T ss_dssp             HHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHH
T ss_pred             HHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHH
Confidence            9999999999  68887889999999999999999999999999999999999999999999999999999999997654


Q ss_pred             cccCC-----------ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSK-----------PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~-----------~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....           ........+++|++.|||||++.  +|++++...+++|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~~L~s~~a~~itG  267 (279)
T 3sju_A          216 VREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLV--GYLVTDAAASITA  267 (279)
T ss_dssp             HHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHH--HHHTSSGGGGCCS
T ss_pred             HHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHhCccccCcCC
Confidence            32110           01112235789999999999974  4677777676666

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-40  Score=327.36  Aligned_cols=232  Identities=20%  Similarity=0.188  Sum_probs=202.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        .++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~~   59 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---G------------------------RGA   59 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---C------------------------TTC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C------------------------CCe
Confidence            4678999999999999999999999999999999999999888877665   1                        346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+..  ...+.+.+.++|+.+                     +++
T Consensus        60 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~---------------------~~v  117 (271)
T 3tzq_B           60 VHHVVDLT-NEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDT---------------------FTV  117 (271)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHH---------------------HHH
Confidence            78899999 999999999999999999999999999873  456778899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       118 N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  197 (271)
T 3tzq_B          118 NARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRL  197 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred             HhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccc
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999987


Q ss_pred             ccccc-CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEK-SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~-~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..... ..........+++|++.|||+|++.+  |++++...+++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~--~L~s~~~~~itG  241 (271)
T 3tzq_B          198 EVGLPQPIVDIFATHHLAGRIGEPHEIAELVC--FLASDRAAFITG  241 (271)
T ss_dssp             C---CHHHHHHHHTTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             cccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCcccCCcCC
Confidence            63221 11111223457899999999998754  566776677666

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.3e-41  Score=327.72  Aligned_cols=233  Identities=23%  Similarity=0.250  Sum_probs=196.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +.++||++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...+                        .+
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~------------------------~~   78 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG------------------------GK   78 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT------------------------CC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------Ce
Confidence            45789999999999999999999999999999987 567777888888776654                        56


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     +++|
T Consensus        79 ~~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~---------------------~~vN  136 (267)
T 3u5t_A           79 ALTAQADVS-DPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRV---------------------IAVN  136 (267)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHH
T ss_pred             EEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHH
Confidence            888999999 999999999999999999999999999988888999999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|+++++++++|.|.+  .|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+++.
T Consensus       137 ~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  214 (267)
T 3u5t_A          137 LKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFL  214 (267)
T ss_dssp             HHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----
T ss_pred             HHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccc
Confidence            99999999999999965  4899999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...... ........|++|++.|||+|++.  +|++++...+++|
T Consensus       215 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~~L~s~~~~~itG  257 (267)
T 3u5t_A          215 EGKSDEVRDRFAKLAPLERLGTPQDIAGAV--AFLAGPDGAWVNG  257 (267)
T ss_dssp             ------CHHHHHTSSTTCSCBCHHHHHHHH--HHHHSTTTTTCCS
T ss_pred             ccCCHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCccccCccC
Confidence            532221 12222346889999999999975  4677787777776

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-40  Score=320.57  Aligned_cols=235  Identities=23%  Similarity=0.264  Sum_probs=209.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------------------------~~~   56 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG------------------------FKA   56 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------------------------CCE
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------Cce
Confidence            35789999999999999999999999999999999999999999888887654                        568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.++++++|+||||||+....++.+.+.++++.+                     +++|+
T Consensus        57 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  114 (247)
T 3lyl_A           57 RGLVLNIS-DIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSV---------------------INTNL  114 (247)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHH---------------------HHHHh
Confidence            89999999 999999999999999999999999999988888889999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|++++++.++|.|.+++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       115 ~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  194 (247)
T 3lyl_A          115 SSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK  194 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh
Confidence            99999999999999988889999999999999999999999999999999999999999999999999999999998776


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .............+.+++..|||++++.+  +++++....++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~dva~~i~--~l~s~~~~~~tG  235 (247)
T 3lyl_A          195 LTDEQKSFIATKIPSGQIGEPKDIAAAVA--FLASEEAKYITG  235 (247)
T ss_dssp             SCHHHHHHHHTTSTTCCCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             ccHHHHHHHhhcCCCCCCcCHHHHHHHHH--HHhCCCcCCccC
Confidence            54332222333457899999999999865  455555555555

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.3e-41  Score=330.26  Aligned_cols=232  Identities=26%  Similarity=0.275  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        .++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~~   77 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G------------------------CGA   77 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C------------------------SSC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C------------------------Ccc
Confidence            4688999999999999999999999999999999999999888877665   1                        457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++++                     +++|+
T Consensus        78 ~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~vN~  135 (277)
T 3gvc_A           78 AACRVDVS-DEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRV---------------------IAINL  135 (277)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHHH
T ss_pred             eEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHh
Confidence            78999999 999999999999999999999999999988888889999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       136 ~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  215 (277)
T 3gvc_A          136 RGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQT  215 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHH
Confidence            99999999999999998899999999999999999999999999999999999999999999999999999999997654


Q ss_pred             cccCCc----cccc---cccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKP----RETS---LISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~----~~~~---~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....+    ....   ...+.+|++.|||||++.  +|++++..++++|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v--~~L~s~~a~~itG  263 (277)
T 3gvc_A          216 AMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIV--VFLLSDDASMITG  263 (277)
T ss_dssp             HHTCC------CCHHHHHHHHHSSCBCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             hhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHH--HHHcCCccCCccC
Confidence            322111    1111   145779999999999875  4566776677666

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.5e-41  Score=333.17  Aligned_cols=238  Identities=21%  Similarity=0.218  Sum_probs=209.2

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      +...++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                       
T Consensus        25 ~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------------------   81 (275)
T 4imr_A           25 LETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG-----------------------   81 (275)
T ss_dssp             HHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT-----------------------
T ss_pred             ccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-----------------------
Confidence            344578999999999999999999999999999999999999999999888887654                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ |.++++++++++.+. +++|+||||||+....++.+.+.++|+.+                     +
T Consensus        82 -~~~~~~~~Dv~-~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~  137 (275)
T 4imr_A           82 -GTAQELAGDLS-EAGAGTDLIERAEAI-APVDILVINASAQINATLSALTPNDLAFQ---------------------L  137 (275)
T ss_dssp             -CCEEEEECCTT-STTHHHHHHHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHH---------------------H
T ss_pred             -CeEEEEEecCC-CHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------H
Confidence             56889999999 999999999999887 99999999999988888999999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       138 ~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  217 (275)
T 4imr_A          138 AVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD  217 (275)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred             HHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence            99999999999999999998888999999999999988888899999999999999999999999999999999999999


Q ss_pred             CCcccccCCccc----cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPRE----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~~----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +........+..    .....+++|+++|||+|++.  +|++++..++++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~fL~s~~a~~itG  266 (275)
T 4imr_A          218 RNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAA--LFLASEACSFMTG  266 (275)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHH--HHHHSGGGTTCCS
T ss_pred             ccccccccChHHHHHHHhhcCccCCCcCHHHHHHHH--HHHcCcccCCCCC
Confidence            765432211111    11123889999999999885  4577777777776

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-40  Score=327.87  Aligned_cols=237  Identities=26%  Similarity=0.296  Sum_probs=203.4

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |...++++||++|||||++|||+++|++|+++|++|++++|+ +.++++.+++.+.+                       
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~-----------------------   78 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGG-----------------------   78 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTT-----------------------
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcC-----------------------
Confidence            556688999999999999999999999999999999999976 45666777665543                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ |.++++++. +..+++|++|+||||||+....++.+.+.++|+.+                     +
T Consensus        79 -~~~~~~~~Dv~-d~~~v~~~~-~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~  134 (273)
T 3uf0_A           79 -GSAEAVVADLA-DLEGAANVA-EELAATRRVDVLVNNAGIIARAPAEEVSLGRWREV---------------------L  134 (273)
T ss_dssp             -CEEEEEECCTT-CHHHHHHHH-HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------H
T ss_pred             -CcEEEEEecCC-CHHHHHHHH-HHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHH---------------------H
Confidence             57889999999 999999994 45566799999999999988888999999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       135 ~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  214 (273)
T 3uf0_A          135 TVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTA  214 (273)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCC
Confidence            99999999999999999999888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +..........  ......|++|++.||||+++.  +|++++...+++|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v--~~L~s~~a~~itG  261 (273)
T 3uf0_A          215 NTAALRADDERAAEITARIPAGRWATPEDMVGPA--VFLASDAASYVHG  261 (273)
T ss_dssp             GGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHH--HHHHSGGGTTCCS
T ss_pred             chhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHhCchhcCCcC
Confidence            86644322111  112245889999999999885  4566776677666

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.3e-40  Score=324.28  Aligned_cols=229  Identities=23%  Similarity=0.268  Sum_probs=201.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                           .++
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~   56 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---------------------------PRV   56 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------------------------GGE
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------------------------Ccc
Confidence            46789999999999999999999999999999999999998888776652                           468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+.+|++|+||||||+....++.+.+.++|+++                     +++|+
T Consensus        57 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~  114 (255)
T 4eso_A           57 HALRSDIA-DLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQ---------------------FAVNT  114 (255)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             eEEEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhh
Confidence            89999999 999999999999999999999999999988888999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       115 ~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          115 KGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             HHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred             HHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence            9999999999999875  48999999999999999999999999999999999999999999999999999999998654


Q ss_pred             cccCCcc------ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPR------ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~------~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......      ......|++|+++|||+|++.+  |++++ .++++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~--~L~s~-~~~itG  238 (255)
T 4eso_A          193 AGITEAERAEFKTLGDNITPMKRNGTADEVARAVL--FLAFE-ATFTTG  238 (255)
T ss_dssp             TTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHH--HHHHT-CTTCCS
T ss_pred             ccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHH--HHcCc-CcCccC
Confidence            3211111      1122368899999999999864  56666 666666

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=7.5e-40  Score=319.93  Aligned_cols=240  Identities=19%  Similarity=0.207  Sum_probs=203.9

Q ss_pred             cccCCCCCCCEEEEecCC-ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCC
Q psy3252          90 MKRYLAPTNGTLSVTGGS-SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPK  168 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas-~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
                      +..++.++||++|||||+ +|||+++|++|+++|++|++++|+.++++++.+++.+...                     
T Consensus        14 ~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---------------------   72 (266)
T 3o38_A           14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL---------------------   72 (266)
T ss_dssp             CCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS---------------------
T ss_pred             cccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC---------------------
Confidence            455677899999999998 5999999999999999999999999999998888865432                     


Q ss_pred             ccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         169 FIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       169 ~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                        .++.++.+|++ |.++++++++++.+++++||+||||||+....++.+.+.++++.+                     
T Consensus        73 --~~~~~~~~Dl~-~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------  128 (266)
T 3o38_A           73 --GRVEAVVCDVT-STEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRV---------------------  128 (266)
T ss_dssp             --SCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------
T ss_pred             --CceEEEEeCCC-CHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHH---------------------
Confidence              57899999999 999999999999999999999999999988888889999999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhC-CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++|+.|+++++++++|.|.++ +.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+
T Consensus       129 ~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  208 (266)
T 3o38_A          129 LNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIAR  208 (266)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCccc
Confidence            9999999999999999999987 668999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         328 TPGFENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       328 T~~~~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |++......... .......+++|+..|||+|++.+  +++++...+++|
T Consensus       209 t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~--~l~s~~~~~~tG  256 (266)
T 3o38_A          209 HKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIA--FLASDYSSYMTG  256 (266)
T ss_dssp             C-----------------CCTTSSCCCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             chhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHH--HHcCccccCccC
Confidence            998775433221 12223457899999999999865  455666666665

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-40  Score=322.87  Aligned_cols=223  Identities=27%  Similarity=0.268  Sum_probs=181.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.                           .++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~   55 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG---------------------------AAV   55 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------------------------------C
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---------------------------Cce
Confidence            56889999999999999999999999999999999999988877666542                           457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcc----cCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE----EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+.....+.    +.+.++|+++                     +
T Consensus        56 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~---------------------~  113 (257)
T 3tpc_A           56 RFRNADVT-NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFART---------------------V  113 (257)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHH---------------------H
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHH---------------------H
Confidence            78999999 99999999999999999999999999988654443    6778899887                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhC------CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~------~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                      ++|+.|+++++++++|.|.++      +.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+|
T Consensus       114 ~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P  193 (257)
T 3tpc_A          114 AVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAP  193 (257)
T ss_dssp             HHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEe
Confidence            999999999999999999885      56899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCcccccccccc-CCCCChHHhhhccceee
Q psy3252         324 PDTDTPGFENEEKSKPRETSLISQT-GGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       324 G~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~~~~~~~  365 (475)
                      |+|+|++................++ +|++.|||++++.+.+.
T Consensus       194 G~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~  236 (257)
T 3tpc_A          194 GIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHIC  236 (257)
T ss_dssp             CCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHH
T ss_pred             CCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence            9999998876544333333334566 89999999999865543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3e-40  Score=319.46  Aligned_cols=233  Identities=25%  Similarity=0.274  Sum_probs=202.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++||++|||||++|||+++|++|+++|++|++++| +.++++++.+++...+                        .++.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------------------------~~~~   57 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG------------------------SDAI   57 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------CCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            57899999999999999999999999999999999 8888888888776543                        4578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        58 ~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~  115 (246)
T 2uvd_A           58 AVRADVA-NAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTV---------------------INTNLK  115 (246)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhH
Confidence            8999999 999999999999999999999999999987778888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       116 g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  195 (246)
T 2uvd_A          116 GVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL  195 (246)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc
Confidence            99999999999999877899999999999999999999999999999999999999999999999999999999987653


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ............|.+|++.|||+|++.+.  ++++...+++|
T Consensus       196 ~~~~~~~~~~~~p~~~~~~~~dvA~~~~~--l~s~~~~~~tG  235 (246)
T 2uvd_A          196 DENIKAEMLKLIPAAQFGEAQDIANAVTF--FASDQSKYITG  235 (246)
T ss_dssp             CTTHHHHHHHTCTTCSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCchhcCCCC
Confidence            21111111123477899999999998654  45555555555

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-40  Score=322.93  Aligned_cols=238  Identities=21%  Similarity=0.296  Sum_probs=204.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+.                      .+
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------------------~~   65 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD----------------------AE   65 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT----------------------CC
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC----------------------ce
Confidence            34678999999999999999999999999999999999999998888887664211                      46


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+... .++.+.+.++|+.+                     +++
T Consensus        66 ~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~  123 (267)
T 1iy8_A           66 VLTTVADVS-DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV---------------------VSI  123 (267)
T ss_dssp             EEEEECCTT-SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHH---------------------HHH
T ss_pred             EEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            888999999 9999999999999999999999999998766 77888999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       124 N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  203 (267)
T 1iy8_A          124 NLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV  203 (267)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred             hhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcch
Confidence            99999999999999999888899999999999999999999999999999999999999999999999999999999986


Q ss_pred             ccc--c--cCCcc----ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENE--E--KSKPR----ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~--~--~~~~~----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...  .  .....    ......|++|++.|||+|++.+.  ++++...+++|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~--l~s~~~~~~tG  254 (267)
T 1iy8_A          204 ENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAF--LLSDDASYVNA  254 (267)
T ss_dssp             HHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHH--HTSGGGTTCCS
T ss_pred             hccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHH--HcCccccCCCC
Confidence            542  1  11111    11123478899999999998654  45555556655

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-40  Score=323.18  Aligned_cols=236  Identities=23%  Similarity=0.281  Sum_probs=200.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .+
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~   71 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG------------------------LN   71 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CC
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------Cc
Confidence            457889999999999999999999999999999999999999888888876543                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhc-CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |.++++++++++.+.+ |++|+||||||+....++.+.+.++++.+                     +++
T Consensus        72 ~~~~~~D~~-~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~  129 (273)
T 1ae1_A           72 VEGSVCDLL-SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNII---------------------MGT  129 (273)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHH
T ss_pred             eEEEECCCC-CHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHH---------------------HHH
Confidence            788999999 9999999999999999 99999999999987778888999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.
T Consensus       130 N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  209 (273)
T 1ae1_A          130 NFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV  209 (273)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred             hhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchh
Confidence            99999999999999999877899999999999999999999999999999999999999999999999999999999986


Q ss_pred             cccccC---Ccc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKS---KPR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~---~~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......   ...   ......|++|++.|||+|++.+  +++++..++++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~--~l~s~~~~~~tG  258 (273)
T 1ae1_A          210 ETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA--FLCFPAASYITG  258 (273)
T ss_dssp             ---------CHHHHHHHHHHSTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCccccCcCC
Confidence            643221   100   1112357889999999999754  456666666665

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.9e-40  Score=322.19  Aligned_cols=236  Identities=25%  Similarity=0.314  Sum_probs=204.6

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCC
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPK  168 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
                      |...++++||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++.+.+                      
T Consensus        23 mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~----------------------   80 (271)
T 3v2g_A           23 MMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG----------------------   80 (271)
T ss_dssp             HHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----------------------
T ss_pred             hccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC----------------------
Confidence            334567999999999999999999999999999999998654 567778888777654                      


Q ss_pred             ccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         169 FIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       169 ~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                        .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     
T Consensus        81 --~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------  136 (271)
T 3v2g_A           81 --GRAVAIRADNR-DAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEV---------------------  136 (271)
T ss_dssp             --CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------
T ss_pred             --CcEEEEECCCC-CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHH---------------------
Confidence              56889999999 999999999999999999999999999988888999999999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc-CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG-IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++|+.|+++++++++|.|.+  .|+||++||..+..+ .++...|++||+|+++|+++|+.|++++||+||+|+||+|+
T Consensus       137 ~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~  214 (271)
T 3v2g_A          137 MAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTD  214 (271)
T ss_dssp             HHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             HHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCc
Confidence            999999999999999999965  589999999877665 78899999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         328 TPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       328 T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |++..... ..........+++|++.|||+|++.  +|++++...+++|
T Consensus       215 T~~~~~~~-~~~~~~~~~~~~~r~~~pedvA~~v--~fL~s~~~~~itG  260 (271)
T 3v2g_A          215 TDMNPADG-DHAEAQRERIATGSYGEPQDIAGLV--AWLAGPQGKFVTG  260 (271)
T ss_dssp             SSSSCSSC-SSHHHHHHTCTTSSCBCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             CCcccccc-hhHHHHHhcCCCCCCCCHHHHHHHH--HHHhCcccCCccC
Confidence            99876432 1222223345889999999999874  5677777777776

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6e-40  Score=315.84  Aligned_cols=188  Identities=27%  Similarity=0.432  Sum_probs=167.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .++.+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~~~   53 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---------------------------NAVIG   53 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------------------------GGEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------------------------CCceE
Confidence            357899999999999999999999999999999999998888777662                           34788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.|
T Consensus        54 ~~~D~~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~g  111 (235)
T 3l6e_A           54 IVADLA-HHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRV---------------------MESNLVS  111 (235)
T ss_dssp             EECCTT-SHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHH---------------------HHHHHHH
T ss_pred             EECCCC-CHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHH---------------------HHHHhHH
Confidence            999999 999999999999999999999999999987788889999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      +++++++++|.|++++ |+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+++..
T Consensus       112 ~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  188 (235)
T 3l6e_A          112 TILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN  188 (235)
T ss_dssp             HHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---
T ss_pred             HHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc
Confidence            9999999999998765 5999999999999999999999999999999999999999999999999999999997553

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=5.4e-41  Score=328.33  Aligned_cols=237  Identities=16%  Similarity=0.160  Sum_probs=196.2

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC---hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCC
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD---EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPN  166 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  166 (475)
                      +..+++++||++|||||++|||+++|++|+++|++|++++|+   .+.++++.+++...+                    
T Consensus         3 ~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--------------------   62 (262)
T 3ksu_A            3 LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG--------------------   62 (262)
T ss_dssp             -CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT--------------------
T ss_pred             CccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC--------------------
Confidence            456788999999999999999999999999999999998764   556777777776543                    


Q ss_pred             CCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         167 PKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       167 ~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                          .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                   
T Consensus        63 ----~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~-------------------  118 (262)
T 3ksu_A           63 ----AKVALYQSDLS-NEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAM-------------------  118 (262)
T ss_dssp             ----CEEEEEECCCC-SHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHH-------------------
T ss_pred             ----CcEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH-------------------
Confidence                57899999999 999999999999999999999999999998888999999999988                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                        +++|+.|+++++++++|.|.  +.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|
T Consensus       119 --~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v  194 (262)
T 3ksu_A          119 --DTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPM  194 (262)
T ss_dssp             --HHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCC
T ss_pred             --HHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCC
Confidence              99999999999999999994  35899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         327 DTPGFENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       327 ~T~~~~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +|+++....... ........+.+|+..|||+|++.+.  ++++ ..+++|-
T Consensus       195 ~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~--L~s~-~~~itG~  243 (262)
T 3ksu_A          195 DTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKF--LTTD-GWWINGQ  243 (262)
T ss_dssp             CTHHHHTCC------------CCCCSCCGGGTHHHHHH--HHTT-TTTCCSC
T ss_pred             cCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHH--HcCC-CCCccCC
Confidence            999875533221 1122234578999999999997544  5666 6677763

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.5e-40  Score=325.59  Aligned_cols=241  Identities=23%  Similarity=0.281  Sum_probs=184.7

Q ss_pred             CcccccccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcC
Q psy3252          85 EPHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKAC  164 (475)
Q Consensus        85 ~~~~~~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (475)
                      ...+.+..|.++.+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                     
T Consensus        15 ~~~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------------------   73 (272)
T 4dyv_A           15 TENLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---------------------   73 (272)
T ss_dssp             -------------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---------------------
T ss_pred             cceeehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------------------
Confidence            33445556677889999999999999999999999999999999999998888777652                     


Q ss_pred             CCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhcc
Q psy3252         165 PNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALW  243 (475)
Q Consensus       165 ~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (475)
                            .++.++.+|++ |.++++++++++.+++|++|+||||||+... .++.+.+.++|+.+                
T Consensus        74 ------~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~----------------  130 (272)
T 4dyv_A           74 ------DDALCVPTDVT-DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQV----------------  130 (272)
T ss_dssp             ------SCCEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHH----------------
T ss_pred             ------CCeEEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHH----------------
Confidence                  35678999999 9999999999999999999999999999755 68889999999988                


Q ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhCC--CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         244 RSWTVIDLNLYGTIHMTKALVEGMKQRG--RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       244 ~~~~v~~vN~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                           +++|+.|+++++++++|.|++++  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|
T Consensus       131 -----~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  205 (272)
T 4dyv_A          131 -----VDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQI  205 (272)
T ss_dssp             -----HHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             -----HHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence                 99999999999999999999876  68999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         322 LPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       322 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +||+|+|++.......... .....+.++++.|||+|++.+.+.- .+....+.+
T Consensus       206 ~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~pedvA~~v~fL~s-~~~~~~~~~  258 (272)
T 4dyv_A          206 DIGNADTPMAQKMKAGVPQ-ADLSIKVEPVMDVAHVASAVVYMAS-LPLDANVQF  258 (272)
T ss_dssp             EEEECC-------------------------CHHHHHHHHHHHHH-SCTTSCCCE
T ss_pred             EECcccChhhhhhcccchh-hhhcccccCCCCHHHHHHHHHHHhC-CCCcCccce
Confidence            9999999987765433221 1223467889999999998655332 244444443

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.6e-40  Score=323.60  Aligned_cols=233  Identities=21%  Similarity=0.230  Sum_probs=202.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+++||++|||||++|||+++|++|+++|++|+++++ +.+.++++.+++.+.+                        .+
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------------------------~~   69 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG------------------------SD   69 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------CC
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------Cc
Confidence            4688999999999999999999999999999999765 5667788888877654                        56


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     +++|
T Consensus        70 ~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~~N  127 (270)
T 3is3_A           70 AIAIKADIR-QVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRV---------------------FSLN  127 (270)
T ss_dssp             EEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHHH
T ss_pred             EEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            889999999 999999999999999999999999999998888999999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEecccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQA-ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a-~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.|+++++++++|.|.+  .|+||++||.. +..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       128 ~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  205 (270)
T 3is3_A          128 TRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMF  205 (270)
T ss_dssp             THHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTH
T ss_pred             hHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhh
Confidence            99999999999999976  58999999988 5678899999999999999999999999999999999999999999987


Q ss_pred             cccccC--------Cc----cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKS--------KP----RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~--------~~----~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......        ..    .......|++|++.|||||++.  +|++++...+++|
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v--~~L~s~~~~~itG  260 (270)
T 3is3_A          206 HEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVV--GFLVSKEGEWVNG  260 (270)
T ss_dssp             HHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHH--HHHTSGGGTTCCS
T ss_pred             hhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHcCCccCCccC
Confidence            632110        00    1112235889999999999875  4677777777776

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-40  Score=322.21  Aligned_cols=240  Identities=21%  Similarity=0.280  Sum_probs=203.1

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      +++..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+                      
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------------------   70 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG----------------------   70 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----------------------
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----------------------
Confidence            4456778899999999999999999999999999999999999988888877732211                      


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +
T Consensus        71 -~~~~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~  127 (267)
T 1vl8_A           71 -VETMAFRCDVS-NYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQV---------------------I  127 (267)
T ss_dssp             -CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------H
T ss_pred             -CeEEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------H
Confidence             45788999999 999999999999999999999999999987778889999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEecccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQA-ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a-~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.|+++++++++|.|++++.|+||++||.+ +..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       128 ~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T  207 (267)
T 1vl8_A          128 EVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRT  207 (267)
T ss_dssp             HHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCS
T ss_pred             HHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcc
Confidence            999999999999999999988889999999998 8888889999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++..........  ......+++|++.|||+|++.+.  ++++...+++|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~--l~s~~~~~itG  255 (267)
T 1vl8_A          208 KMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVF--LASEEAKYVTG  255 (267)
T ss_dssp             TTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHH--HHSGGGTTCCS
T ss_pred             ccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHH--HcCccccCCcC
Confidence            986543211110  11123477899999999998654  45555555554

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-40  Score=325.31  Aligned_cols=226  Identities=20%  Similarity=0.202  Sum_probs=191.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.                       ..
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~   84 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-----------------------NI   84 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----------------------SC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------------------Ce
Confidence            3568899999999999999999999999999999999999999998888876542                       34


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+... .++.+.+.++|+++                     +++
T Consensus        85 ~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~---------------------~~v  142 (281)
T 4dry_A           85 VRAVVCDVG-DPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGI---------------------VAA  142 (281)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             EEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            688999999 9999999999999999999999999998754 68889999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC--CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRG--RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      |+.|+++++++++|.|++++  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       143 N~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  222 (281)
T 4dry_A          143 NLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATD  222 (281)
T ss_dssp             HTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-
T ss_pred             HhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcCh
Confidence            99999999999999999875  6899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhcccee
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      +......... ......+.+|.+.|||+|++.+.+
T Consensus       223 ~~~~~~~~~~-~~~~~~~~~~~~~pedvA~~v~fL  256 (281)
T 4dry_A          223 MTARMSTGVL-QANGEVAAEPTIPIEHIAEAVVYM  256 (281)
T ss_dssp             ------CEEE-CTTSCEEECCCBCHHHHHHHHHHH
T ss_pred             hhhhhcchhh-hhhhcccccCCCCHHHHHHHHHHH
Confidence            8775533211 112234668899999999986543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-39  Score=318.18  Aligned_cols=190  Identities=25%  Similarity=0.332  Sum_probs=174.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~~~   57 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG------------------------GTALA   57 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------------------------CEEEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcEEE
Confidence            468999999999999999999999999999999999999999998887654                        56889


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.|
T Consensus        58 ~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~---------------------~~vN~~g  115 (264)
T 3tfo_A           58 QVLDVT-DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERM---------------------IDVNIKG  115 (264)
T ss_dssp             EECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTHH
T ss_pred             EEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHHhHH
Confidence            999999 999999999999999999999999999988888999999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      +++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|+ + ||+||+|+||+|+|++...
T Consensus       116 ~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~  191 (264)
T 3tfo_A          116 VLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGT  191 (264)
T ss_dssp             HHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-------
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCccccc
Confidence            99999999999998888999999999999999999999999999999999999998 5 9999999999999997654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.8e-40  Score=320.05  Aligned_cols=238  Identities=21%  Similarity=0.254  Sum_probs=205.5

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +..++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        
T Consensus         2 ~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------   57 (260)
T 2ae2_A            2 AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG------------------------   57 (260)
T ss_dssp             CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------
Confidence            34567889999999999999999999999999999999999999888888776543                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhc-CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      .++.++.+|++ |.++++++++++.+++ +++|+||||||+....++.+.+.++++.+                     +
T Consensus        58 ~~~~~~~~D~~-~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~  115 (260)
T 2ae2_A           58 FKVEASVCDLS-SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLI---------------------M  115 (260)
T ss_dssp             CEEEEEECCTT-CHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------H
T ss_pred             CcEEEEEcCCC-CHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------H
Confidence            56889999999 9999999999999999 89999999999987778888999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.|+++++++++|.|.+++.|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||.|+|+
T Consensus       116 ~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  195 (260)
T 2ae2_A          116 SINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS  195 (260)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred             HHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence            99999999999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCcc-----ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPR-----ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~-----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +..........     ......+++|++.|||+|++.+  +++++...+++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~--~l~s~~~~~~tG  245 (260)
T 2ae2_A          196 LVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVA--FLCFPAASYVTG  245 (260)
T ss_dssp             HHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             chhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHH--HHcCccccCCCC
Confidence            75432211110     1112247789999999998754  455555555555

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=9e-40  Score=317.47  Aligned_cols=195  Identities=30%  Similarity=0.431  Sum_probs=172.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+..                     .++
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---------------------~~~   61 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHV---------------------QEP   61 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTS---------------------CCC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcccc---------------------Ccc
Confidence            45789999999999999999999999999999999999999999999887764210                     357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+....++ +.+.++|+.+                     +++|+
T Consensus        62 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~---------------------~~vN~  118 (250)
T 3nyw_A           62 IVLPLDIT-DCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKI---------------------MEINV  118 (250)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC-SCHHHHHHHH---------------------HHHHT
T ss_pred             eEEeccCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCC-CCCHHHHHHH---------------------HHHHH
Confidence            78999999 9999999999999999999999999999877777 7788889888                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus       119 ~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  197 (250)
T 3nyw_A          119 IAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK  197 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh
Confidence            9999999999999998888999999999999977779999999999999999999999999999999999999999654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.5e-40  Score=326.42  Aligned_cols=228  Identities=21%  Similarity=0.303  Sum_probs=200.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-------HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCC
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-------KLLQAQEEIKKACPNPKFIRFIEYEEIKKACP  165 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-------~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  165 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+       .++++.+++...+                   
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------------   64 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-------------------   64 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-------------------
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-------------------
Confidence            46789999999999999999999999999999999999976       4667777776654                   


Q ss_pred             CCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhcccc
Q psy3252         166 NPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS  245 (475)
Q Consensus       166 ~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (475)
                           .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                  
T Consensus        65 -----~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~------------------  120 (285)
T 3sc4_A           65 -----GQALPIVGDIR-DGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLM------------------  120 (285)
T ss_dssp             -----SEEEEEECCTT-SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHH------------------
T ss_pred             -----CcEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH------------------
Confidence                 57899999999 999999999999999999999999999998888999999999988                  


Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC-CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         246 WTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI-YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       246 ~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                         +++|+.|+++++++++|.|++++.|+||++||.++..+. ++...|++||+|+++|+++|+.|++++||+||+|+||
T Consensus       121 ---~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG  197 (285)
T 3sc4_A          121 ---NGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPR  197 (285)
T ss_dssp             ---HHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECS
T ss_pred             ---HHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCC
Confidence               999999999999999999999888999999999998876 7889999999999999999999999999999999999


Q ss_pred             -CCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         325 -DTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       325 -~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                       .+.|++.......       ..+++|+++|||+|++.  ++++++.. .++|
T Consensus       198 ~~v~t~~~~~~~~~-------~~~~~r~~~pedvA~~~--~~l~s~~~-~~tG  240 (285)
T 3sc4_A          198 TTVATAAVQNLLGG-------DEAMARSRKPEVYADAA--YVVLNKPS-SYTG  240 (285)
T ss_dssp             SCBCCHHHHHHHTS-------CCCCTTCBCTHHHHHHH--HHHHTSCT-TCCS
T ss_pred             CccccHHHHhhccc-------cccccCCCCHHHHHHHH--HHHhCCcc-cccc
Confidence             7999976543221       23578999999999985  45555555 5554

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=4.3e-39  Score=323.87  Aligned_cols=254  Identities=22%  Similarity=0.295  Sum_probs=203.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+..                      .+
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~----------------------~~   60 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG----------------------PE   60 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG----------------------GG
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----------------------Ce
Confidence            35678999999999999999999999999999999999999999999888765421                      36


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++.+.+.+|++|+||||||+....++.+.+.++++.+                     +++|
T Consensus        61 ~~~~~~Dl~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N  118 (319)
T 3ioy_A           61 VMGVQLDVA-SREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWL---------------------LGVN  118 (319)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHH
T ss_pred             EEEEECCCC-CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            889999999 999999999999999999999999999988888999999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhC------CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~------~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      +.|+++++++++|.|.++      +.|+||++||.++..+.++...|++||+|+++|+++|+.|+.++||+|++|+||+|
T Consensus       119 ~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v  198 (319)
T 3ioy_A          119 LHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLV  198 (319)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCB
T ss_pred             hHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeE
Confidence            999999999999999875      57999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHH
Q psy3252         327 DTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQ  406 (475)
Q Consensus       327 ~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~  406 (475)
                      +|++................+                             ....  ....   ........++||+||+.
T Consensus       199 ~T~~~~~~~~~~~~~~~~~~~-----------------------------~~~~--~~~~---~~~~~~~~~~pe~vA~~  244 (319)
T 3ioy_A          199 KSYIYASDDIRPDALKGEVKP-----------------------------VDKT--AVER---LAGVHEFGMEPDVIGAR  244 (319)
T ss_dssp             C---------------------------------------------------------------CCGGGSSBCHHHHHHH
T ss_pred             ccCcccccccCchhhcccccc-----------------------------hhHH--HHHH---HHHhhhcCCCHHHHHHH
Confidence            999876432211110000000                             0000  0000   00000113799999999


Q ss_pred             HHHHHhcCCeeEEeCchh
Q psy3252         407 LLEDALKGNYFSTVGLES  424 (475)
Q Consensus       407 i~~ai~~g~~~~~~~~~~  424 (475)
                      ++.++++++..++.+...
T Consensus       245 ~~~al~~~~~~i~~~~~~  262 (319)
T 3ioy_A          245 VIEAMKANRLHIFSHPDH  262 (319)
T ss_dssp             HHHHHHTTCSEECCCSTT
T ss_pred             HHHHHHcCCCEEEcCHHH
Confidence            999999999888776543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=9.4e-40  Score=316.51  Aligned_cols=222  Identities=28%  Similarity=0.385  Sum_probs=194.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~~   59 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG------------------------AKVH   59 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCEE
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            4679999999999999999999999999999999999999988888886543                        4688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.
T Consensus        60 ~~~~Dv~-~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~  117 (247)
T 2jah_A           60 VLELDVA-DRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRM---------------------IDTNLL  117 (247)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHH---------------------HHHHhH
Confidence            8999999 999999999999999999999999999987788889999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|++++ |+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       118 g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  196 (247)
T 2jah_A          118 GLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI  196 (247)
T ss_dssp             HHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred             HHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcc
Confidence            99999999999998877 99999999999999999999999999999999999999999999999999999999986543


Q ss_pred             ccCCccccccccccCCC--CChHHhhhcccee
Q psy3252         335 EKSKPRETSLISQTGGL--YRPEVVKQSGLTI  364 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~--~~pe~va~~~~~~  364 (475)
                      ............+ +++  ++|||+|++.+.+
T Consensus       197 ~~~~~~~~~~~~~-~~~~~~~pedvA~~v~~l  227 (247)
T 2jah_A          197 THTATKEMYEQRI-SQIRKLQAQDIAEAVRYA  227 (247)
T ss_dssp             CCHHHHHHHHHHT-TTSCCBCHHHHHHHHHHH
T ss_pred             cchhhHHHHHhcc-cccCCCCHHHHHHHHHHH
Confidence            2110000001123 566  9999999986543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=7.4e-40  Score=322.16  Aligned_cols=227  Identities=22%  Similarity=0.254  Sum_probs=196.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-------HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-------LLQAQEEIKKACPNPKFIRFIEYEEIKKACPN  166 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  166 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++...+                    
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--------------------   61 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG--------------------   61 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT--------------------
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC--------------------
Confidence            57889999999999999999999999999999999998754       566666665543                    


Q ss_pred             CCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         167 PKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       167 ~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                          .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                   
T Consensus        62 ----~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~-------------------  117 (274)
T 3e03_A           62 ----GQGLALKCDIR-EEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLM-------------------  117 (274)
T ss_dssp             ----SEEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHH-------------------
T ss_pred             ----CeEEEEeCCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHH-------------------
Confidence                57889999999 999999999999999999999999999988888899999999988                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc--CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG--IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~--~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                        +++|+.|+++++++++|.|++++.|+||++||..+..+  .++...|++||+|+++|+++|+.|++++||+||+|+||
T Consensus       118 --~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG  195 (274)
T 3e03_A          118 --QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPR  195 (274)
T ss_dssp             --HHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECS
T ss_pred             --HhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECC
Confidence              99999999999999999999988899999999999887  67889999999999999999999999999999999999


Q ss_pred             -CCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         325 -DTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       325 -~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                       .++|++......         .+..+..+|||+|++.  ++++++...+++|-
T Consensus       196 ~~v~T~~~~~~~~---------~~~~~~~~pedvA~~v--~~l~s~~~~~itG~  238 (274)
T 3e03_A          196 TVIATDAINMLPG---------VDAAACRRPEIMADAA--HAVLTREAAGFHGQ  238 (274)
T ss_dssp             BCBCC-------C---------CCGGGSBCTHHHHHHH--HHHHTSCCTTCCSC
T ss_pred             cccccchhhhccc---------ccccccCCHHHHHHHH--HHHhCccccccCCe
Confidence             799998732211         1234578999999875  45667777777763

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.2e-39  Score=319.98  Aligned_cols=237  Identities=20%  Similarity=0.172  Sum_probs=201.8

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ..++++||++|||||++|||+++|++|+++|++|++++| +.+..+++.+++.+.+                        
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------------------------   78 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG------------------------   78 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------------------------
Confidence            457889999999999999999999999999999999999 5556666666666543                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     ++
T Consensus        79 ~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~---------------------~~  136 (271)
T 4iin_A           79 YKAAVIKFDAA-SESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHV---------------------ID  136 (271)
T ss_dssp             CCEEEEECCTT-CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HH
T ss_pred             CceEEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHH---------------------HH
Confidence            56889999999 999999999999999999999999999988888889999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|++++++.++|.|.+++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       137 ~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  216 (271)
T 4iin_A          137 NNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM  216 (271)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred             hccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence            99999999999999999998889999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ................+.+|+..|||+|++.+  +++++...+++|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~--~l~s~~~~~itG  260 (271)
T 4iin_A          217 NANLKDELKADYVKNIPLNRLGSAKEVAEAVA--FLLSDHSSYITG  260 (271)
T ss_dssp             -----------CGGGCTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHH--HHhCCCcCCCcC
Confidence            87665444344444568899999999999754  455555555555

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-40  Score=322.24  Aligned_cols=234  Identities=18%  Similarity=0.197  Sum_probs=203.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   59 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG------------------------VEAR   59 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------------------------SCEE
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            4679999999999999999999999999999999999998888888776543                        4688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+. ...++.+.+.++|+.+                     +++|+
T Consensus        60 ~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~N~  117 (262)
T 1zem_A           60 SYVCDVT-SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARV---------------------LTINV  117 (262)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHH---------------------HHHhh
Confidence            8999999 99999999999999999999999999987 6678888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|.+++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       118 ~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          118 TGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence            99999999999999988789999999999999999999999999999999999999999999999999999999998653


Q ss_pred             c------------ccCCcc-c---cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 E------------EKSKPR-E---TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~------------~~~~~~-~---~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .            ....+. .   .....|++|+++|||||++.+  |++++...+++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~--~l~s~~~~~itG  254 (262)
T 1zem_A          198 RQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA--FLLGDDSSFMTG  254 (262)
T ss_dssp             HHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH--HHHSGGGTTCCS
T ss_pred             hccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHcCchhcCcCC
Confidence            2            110111 1   112357899999999998754  566666666665

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.1e-39  Score=317.01  Aligned_cols=228  Identities=25%  Similarity=0.283  Sum_probs=201.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.                       .++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~   64 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-----------------------RQP   64 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----------------------CCC
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----------------------CCc
Confidence            457899999999999999999999999999999999999999999888876542                       356


Q ss_pred             EEEEeec--CCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         174 EYVSLDI--SKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       174 ~~~~~Dv--t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.+|+  + |.++++++++++.+++|++|+||||||+. ...++.+.+.++|+.+                     ++
T Consensus        65 ~~~~~D~~~~-~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~  122 (252)
T 3f1l_A           65 QWFILDLLTC-TSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV---------------------MQ  122 (252)
T ss_dssp             EEEECCTTTC-CHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHH---------------------HH
T ss_pred             eEEEEecccC-CHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHH---------------------Hh
Confidence            7899999  8 99999999999999999999999999986 3468889999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|+++. |+||+|+||+|+|++
T Consensus       123 ~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~  201 (252)
T 3f1l_A          123 VNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAM  201 (252)
T ss_dssp             HHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHH
T ss_pred             hhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCch
Confidence            9999999999999999999888999999999999999999999999999999999999999988 999999999999997


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ........        +..++..|||++++.  +|++++...+++|-
T Consensus       202 ~~~~~~~~--------~~~~~~~p~dva~~~--~~L~s~~~~~itG~  238 (252)
T 3f1l_A          202 RASAFPTE--------DPQKLKTPADIMPLY--LWLMGDDSRRKTGM  238 (252)
T ss_dssp             HHHHCTTC--------CGGGSBCTGGGHHHH--HHHHSGGGTTCCSC
T ss_pred             hhhhCCcc--------chhccCCHHHHHHHH--HHHcCccccCCCCC
Confidence            55332211        224678999999874  45677777777763

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=6.3e-40  Score=321.34  Aligned_cols=234  Identities=23%  Similarity=0.308  Sum_probs=202.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.++.                      ..+
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----------------------~~~   63 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD----------------------AIL   63 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTT----------------------CEE
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC----------------------ceE
Confidence            5688999999999999999999999999999999999999999999998876532                      567


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+++++++    ++++++|+||||||+....++.+.+.++|+++                     +++|+
T Consensus        64 ~~~~~D~~-~~~~~~~~~----~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~vN~  117 (267)
T 3t4x_A           64 QPVVADLG-TEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDIPDEDWFKL---------------------FEVNI  117 (267)
T ss_dssp             EEEECCTT-SHHHHHHHH----HHCCCCSEEEECCCCCCCCCGGGSCHHHHHHH---------------------HHHHT
T ss_pred             EEEecCCC-CHHHHHHHH----HhcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------HHHHh
Confidence            88999999 988877665    46899999999999988888899999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||.|+|++...
T Consensus       118 ~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (267)
T 3t4x_A          118 MSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVET  197 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHH
Confidence            99999999999999998889999999999999999999999999999999999999999999999999999999997553


Q ss_pred             cccCC--------ccc-c------ccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKSK--------PRE-T------SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~~--------~~~-~------~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .....        +.. .      ....+++|++.|||||++.  +||+++..++++|-
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v--~fL~s~~~~~itG~  254 (267)
T 3t4x_A          198 MLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLV--TFLSSPLSSAINGS  254 (267)
T ss_dssp             HHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             HHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHH--HHHcCccccCccCC
Confidence            21110        000 0      0123679999999999874  56777777777763

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=7.4e-40  Score=329.10  Aligned_cols=236  Identities=22%  Similarity=0.295  Sum_probs=202.7

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------hhHHHHHHHHHHHhCCCCcchhhhhHHH
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD------------EKKLLQAQEEIKKACPNPKFIRFIEYEE  159 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~  159 (475)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+            .++++++.+++...+             
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  106 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-------------  106 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-------------
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-------------
Confidence            4567899999999999999999999999999999999886            677777777776543             


Q ss_pred             hhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccch
Q psy3252         160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTR  239 (475)
Q Consensus       160 ~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (475)
                                 .++.++.+|++ |.++++++++++.+++|+||+||||||+....++.+.+.++|+.+            
T Consensus       107 -----------~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~------------  162 (317)
T 3oec_A          107 -----------RRIIARQADVR-DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDI------------  162 (317)
T ss_dssp             -----------CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHH------------
T ss_pred             -----------CeEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH------------
Confidence                       56889999999 999999999999999999999999999988888899999999988            


Q ss_pred             hhccccchhhhhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         240 LALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       240 ~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                               +++|+.|+++++++++|.|++++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+|
T Consensus       163 ---------~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  233 (317)
T 3oec_A          163 ---------LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRV  233 (317)
T ss_dssp             ---------HHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             ---------HHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence                     99999999999999999998875 68999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCcccc------c--CCccc--------cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         319 TLCLPPDTDTPGFENEE------K--SKPRE--------TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       319 n~V~PG~v~T~~~~~~~------~--~~~~~--------~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+|+||+|+|++.....      .  ..+..        .....+ ++++.|||||++.  +||+++..++++|
T Consensus       234 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~pedvA~av--~fL~s~~a~~itG  304 (317)
T 3oec_A          234 NSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-IPWVEPEDVSNAV--AWLASDEARYIHG  304 (317)
T ss_dssp             EEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-SSSBCHHHHHHHH--HHHTSGGGTTCCS
T ss_pred             EEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-CCCCCHHHHHHHH--HHHcCCcccCCCC
Confidence            99999999999754211      0  00000        001123 7889999999874  5677777777776

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=6.8e-40  Score=326.21  Aligned_cols=237  Identities=13%  Similarity=0.087  Sum_probs=202.9

Q ss_pred             ccccCCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCC
Q psy3252          89 QMKRYLAPTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPN  166 (475)
Q Consensus        89 ~~~~~~~l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  166 (475)
                      .|..+++++||++|||||+|  |||+++|++|+++|++|++++|+.+..+.+.+.....                     
T Consensus        21 sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---------------------   79 (296)
T 3k31_A           21 SMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---------------------   79 (296)
T ss_dssp             CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---------------------
T ss_pred             cccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---------------------
Confidence            45667889999999999997  9999999999999999999999976655554443332                     


Q ss_pred             CCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhc
Q psy3252         167 PKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLAL  242 (475)
Q Consensus       167 ~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
                          ..+.++.+|++ |.++++++++++.+++|+||+||||||+...    .++.+.+.++|+.+               
T Consensus        80 ----~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~---------------  139 (296)
T 3k31_A           80 ----GVKLTVPCDVS-DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTS---------------  139 (296)
T ss_dssp             ----TCCEEEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHH---------------
T ss_pred             ----CCeEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHH---------------
Confidence                23578999999 9999999999999999999999999999764    67888999999988               


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         243 WRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       243 ~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                            +++|+.|+++++++++|.|.+  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+
T Consensus       140 ------~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~  211 (296)
T 3k31_A          140 ------MHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAIS  211 (296)
T ss_dssp             ------HHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred             ------HHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEE
Confidence                  999999999999999999976  589999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         323 PPDTDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       323 PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ||+|+|++.........  .......+++|++.|||||++.  +|++++...+++|
T Consensus       212 PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~fL~s~~a~~itG  265 (296)
T 3k31_A          212 AGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAA--LYLLSDLGRGTTG  265 (296)
T ss_dssp             ECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             ECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHcCCccCCccC
Confidence            99999998765432111  1122245889999999999875  4566776677776

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.3e-39  Score=317.11  Aligned_cols=233  Identities=25%  Similarity=0.320  Sum_probs=192.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .+
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~   56 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG---------------------------DA   56 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------------------------TT
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC---------------------------Cc
Confidence            467899999999999999999999999999999999999998888776551                           45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |.++++++++++.++++++|+||||||+.. ..++.+.+.++++++                     +++
T Consensus        57 ~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~~  114 (261)
T 3n74_A           57 ALAVAADIS-KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRI---------------------VGV  114 (261)
T ss_dssp             EEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHH---------------------HHH
T ss_pred             eEEEEecCC-CHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            788999999 999999999999999999999999999876 567788899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC----CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRG----RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~----~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      |+.|+++++++++|.|.+++    .|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||.|+
T Consensus       115 N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  194 (261)
T 3n74_A          115 NVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGE  194 (261)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred             hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence            99999999999999998764    57899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCC----ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         328 TPGFENEEKSK----PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       328 T~~~~~~~~~~----~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |++........    ........+.+|+..|||++++.+  +++++...+++|
T Consensus       195 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~--~l~s~~~~~itG  245 (261)
T 3n74_A          195 TPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAA--FLCSPQASMITG  245 (261)
T ss_dssp             ----------------------CTTSSCCCHHHHHHHHH--HHTSGGGTTCCS
T ss_pred             ChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHH--HHcCCcccCcCC
Confidence            99877543211    112223457899999999999854  566666677666

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=9e-40  Score=324.44  Aligned_cols=235  Identities=17%  Similarity=0.121  Sum_probs=197.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      |+++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++....+                       .
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-----------------------~   60 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-----------------------N   60 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-----------------------T
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-----------------------C
Confidence            4568899999999999999999999999999999999 999999888888863322                       4


Q ss_pred             eEEEEEeecCCCHH-----------------HHHHHHHHHHHhcCCccEEEEccccccCCCcccCC--------------
Q psy3252         172 FIEYVSLDISKDYE-----------------NIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT--------------  220 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~-----------------~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~--------------  220 (475)
                      ++.++.+|++ +.+                 +++++++++.+++|++|+||||||+....++.+.+              
T Consensus        61 ~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~  139 (291)
T 1e7w_A           61 SAITVQADLS-NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM  139 (291)
T ss_dssp             CEEEEECCCS-SSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHH
T ss_pred             eeEEEEeecC-CcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence            6889999999 888                 99999999999999999999999998777777888              


Q ss_pred             HHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCC------CCeEEEeccccccccCCCChhhH
Q psy3252         221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG------RGCIVITASQAANLGIYGLAAYT  294 (475)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~------~g~IV~iSS~a~~~~~~~~~~Y~  294 (475)
                      .++++.+                     +++|+.|+++++++++|.|.+++      .|+||++||..+..+.++...|+
T Consensus       140 ~~~~~~~---------------------~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  198 (291)
T 1e7w_A          140 ETATADL---------------------FGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT  198 (291)
T ss_dssp             HHHHHHH---------------------HHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHH
T ss_pred             HHHHHHH---------------------HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhH
Confidence            7788777                     99999999999999999999877      69999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCCccccccccccC-CCCChHHhhhccceeeecCCCCCC
Q psy3252         295 SSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTG-GLYRPEVVKQSGLTITLCLPPDTD  373 (475)
Q Consensus       295 aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~pe~va~~~~~~~~~~~~~~~  373 (475)
                      +||+|+++|+++|+.|++++||+||+|+||+|+|++ . ..+..........|++ |+++|||+|++.+  +++++...+
T Consensus       199 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~--~l~s~~~~~  274 (291)
T 1e7w_A          199 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVI--FLCSSKAKY  274 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHH--HHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHH--HHhCCcccC
Confidence            999999999999999999999999999999999998 3 2110001111234777 9999999999865  455565666


Q ss_pred             CCC
Q psy3252         374 TPG  376 (475)
Q Consensus       374 ~~g  376 (475)
                      ++|
T Consensus       275 itG  277 (291)
T 1e7w_A          275 ITG  277 (291)
T ss_dssp             CCS
T ss_pred             ccC
Confidence            665

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=6.4e-40  Score=320.00  Aligned_cols=234  Identities=25%  Similarity=0.235  Sum_probs=192.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +++++||++|||||++|||+++|++|+++|++|+++ +|+.+.++++.+++.+.+                        .
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------------------------~   58 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG------------------------R   58 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT------------------------S
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------C
Confidence            457889999999999999999999999999999998 667777787777776543                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+. ...++.+.+.++|+++                     ++
T Consensus        59 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~  116 (259)
T 3edm_A           59 SALAIKADLT-NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQV---------------------LD  116 (259)
T ss_dssp             CCEEEECCTT-CHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHH---------------------HH
T ss_pred             ceEEEEcCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHH---------------------HH
Confidence            5788999999 99999999999999999999999999987 5678889999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|+++++++++|.|.+  .|+||++||.++. .+.++...|++||+|+++|+++|+.|+++. |+||+|+||+|+|+
T Consensus       117 vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~  193 (259)
T 3edm_A          117 VNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTT  193 (259)
T ss_dssp             HHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCc
Confidence            9999999999999999976  4899999999998 688999999999999999999999999987 99999999999999


Q ss_pred             CCcccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         330 GFENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       330 ~~~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +........ ........+++|++.|||++++.  +|++++...+++|-
T Consensus       194 ~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v--~~L~s~~~~~itG~  240 (259)
T 3edm_A          194 FHDTFTKPEVRERVAGATSLKREGSSEDVAGLV--AFLASDDAAYVTGA  240 (259)
T ss_dssp             ---------------------CCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             ccccccChHHHHHHHhcCCCCCCcCHHHHHHHH--HHHcCccccCccCC
Confidence            877654221 12222345889999999999985  46777777777763

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.8e-39  Score=316.59  Aligned_cols=234  Identities=23%  Similarity=0.307  Sum_probs=196.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++||++|||||++|||+++|++|+++|++|++++|+.++ ++++.+++.+..+                       .++.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----------------------~~~~   58 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-----------------------VKVL   58 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-----------------------SCEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC-----------------------CcEE
Confidence            578999999999999999999999999999999999887 8888777765311                       4578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.
T Consensus        59 ~~~~D~~-~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~  116 (260)
T 1x1t_A           59 YDGADLS-KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAI---------------------LALNLS  116 (260)
T ss_dssp             EECCCTT-SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTH
T ss_pred             EEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHHH
Confidence            8999999 999999999999999999999999999987778888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|.+++.|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus       117 g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  196 (260)
T 1x1t_A          117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh
Confidence            99999999999999877899999999999999999999999999999999999999999999999999999999987643


Q ss_pred             ccC---------Ccccc---ccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKS---------KPRET---SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~---------~~~~~---~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...         .....   ....|.+|++.|||++++.+.  ++++...+++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~--l~s~~~~~~tG  248 (260)
T 1x1t_A          197 ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVF--LASDAAAQITG  248 (260)
T ss_dssp             ------------------CHHHHCTTCCCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             hhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHH--HhChhhcCCCC
Confidence            211         01001   122477899999999998654  55555555555

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.6e-40  Score=322.27  Aligned_cols=239  Identities=21%  Similarity=0.232  Sum_probs=203.9

Q ss_pred             ccccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCC
Q psy3252          89 QMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPK  168 (475)
Q Consensus        89 ~~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
                      .|.++++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                       
T Consensus        20 ~~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------------------   76 (276)
T 2b4q_A           20 HMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY-----------------------   76 (276)
T ss_dssp             -CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS-----------------------
T ss_pred             ccccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----------------------
Confidence            445567899999999999999999999999999999999999998888777766431                       


Q ss_pred             ccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         169 FIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       169 ~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                        .++.++.+|++ |.++++++++++.+.+|++|+||||||+....++.+.+.++|+.+                     
T Consensus        77 --~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------  132 (276)
T 2b4q_A           77 --GDCQAIPADLS-SEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKV---------------------  132 (276)
T ss_dssp             --SCEEECCCCTT-SHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHH---------------------
T ss_pred             --CceEEEEeeCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------
Confidence              25778899999 999999999999999999999999999987778888999999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCC----CeEEEeccccccccCCCCh-hhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGR----GCIVITASQAANLGIYGLA-AYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~----g~IV~iSS~a~~~~~~~~~-~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                      +++|+.|+++++++++|.|++++.    |+||++||.++..+.++.. .|++||+|+++|+++++.|++++||+||+|+|
T Consensus       133 ~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~P  212 (276)
T 2b4q_A          133 MQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAP  212 (276)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence            999999999999999999987765    8999999999998888888 99999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCcccccc--ccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         324 PDTDTPGFENEEKSKPRETSL--ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       324 G~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+|+|++..............  ..|++|++.|||+|++.+.  ++.+...+++|
T Consensus       213 G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~--l~s~~~~~~tG  265 (276)
T 2b4q_A          213 GRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAIS--LAGTAGAYMTG  265 (276)
T ss_dssp             CCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             ccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHH--HhCccccCCCC
Confidence            999999875432111111111  3477899999999998655  44555555555

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-40  Score=328.02  Aligned_cols=237  Identities=22%  Similarity=0.268  Sum_probs=202.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC---EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA---HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga---~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .+++||++|||||++|||+++|++|+++|+   +|++++|+.++++++.+++....+.                      
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~----------------------   86 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN----------------------   86 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT----------------------
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC----------------------
Confidence            457899999999999999999999999998   9999999999999999988776432                      


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      .++.++.+|++ |.++++++++++.+++|+||+||||||+.. ..++.+.+.++|+++                     +
T Consensus        87 ~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~---------------------~  144 (287)
T 3rku_A           87 AKVHVAQLDIT-QAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDV---------------------F  144 (287)
T ss_dssp             CEEEEEECCTT-CGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHH---------------------H
T ss_pred             CeEEEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHH---------------------H
Confidence            57889999999 999999999999999999999999999875 567889999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       145 ~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~  224 (287)
T 3rku_A          145 DTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE  224 (287)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence            99999999999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +.......................|||||++.  +|++++....++|
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v--~~l~s~~~~~i~g  269 (287)
T 3rku_A          225 FSLVRYRGNEEQAKNVYKDTTPLMADDVADLI--VYATSRKQNTVIA  269 (287)
T ss_dssp             HHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHH--HHHHTSCTTEEEE
T ss_pred             cccccccCcHHHHHHhhcccCCCCHHHHHHHH--HHHhCCCCCeEec
Confidence            75432222211111111223345899999875  4566666655443

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=9.2e-39  Score=312.06  Aligned_cols=198  Identities=28%  Similarity=0.319  Sum_probs=177.5

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .+.|.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                       
T Consensus        21 ~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------------------   77 (262)
T 3rkr_A           21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-----------------------   77 (262)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----------------------
T ss_pred             cchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-----------------------
Confidence            345677899999999999999999999999999999999999999999988887654                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc-ccCCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                       .++.++.+|++ |.++++++++++.+.+|++|+||||||+ ...+++.+.+.++++.+                     
T Consensus        78 -~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~---------------------  134 (262)
T 3rkr_A           78 -GEAESHACDLS-HSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDAL---------------------  134 (262)
T ss_dssp             -CEEEEEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHH---------------------
T ss_pred             -CceeEEEecCC-CHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHH---------------------
Confidence             56889999999 9999999999999999999999999998 45578888999999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       135 ~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t  214 (262)
T 3rkr_A          135 IAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRT  214 (262)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcC
Confidence            99999999999999999999988899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcc
Q psy3252         329 PGFEN  333 (475)
Q Consensus       329 ~~~~~  333 (475)
                      ++...
T Consensus       215 ~~~~~  219 (262)
T 3rkr_A          215 EFGVG  219 (262)
T ss_dssp             -----
T ss_pred             Ccccc
Confidence            97543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=3.3e-39  Score=312.92  Aligned_cols=231  Identities=24%  Similarity=0.286  Sum_probs=190.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+. +++++   ++.+.+                        .++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~------------------------~~~   56 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLG------------------------RRV   56 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTT------------------------CCE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcC------------------------CcE
Confidence            46799999999999999999999999999999999998 66654   333322                        467


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.++++++|+||||||+....++.+.+.++++.+                     +++|+
T Consensus        57 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~  114 (249)
T 2ew8_A           57 LTVKCDVS-QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKT---------------------FEINV  114 (249)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEeecC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHHh
Confidence            88999999 999999999999999999999999999987778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc-
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE-  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~-  332 (475)
                      .|+++++++++|.|++++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.. 
T Consensus       115 ~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  194 (249)
T 2ew8_A          115 DSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA  194 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh
Confidence            9999999999999998878999999999999999999999999999999999999999999999999999999999866 


Q ss_pred             ccccC-CccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKS-KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~-~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..... .........+++|++.|||+|++.+.  ++++...+++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~--l~s~~~~~~tG  237 (249)
T 2ew8_A          195 SALSAMFDVLPNMLQAIPRLQVPLDLTGAAAF--LASDDASFITG  237 (249)
T ss_dssp             -----------CTTSSSCSCCCTHHHHHHHHH--HTSGGGTTCCS
T ss_pred             ccccchhhHHHHhhCccCCCCCHHHHHHHHHH--HcCcccCCCCC
Confidence            32211 01111111577899999999998654  45555555555

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2.8e-39  Score=316.92  Aligned_cols=233  Identities=24%  Similarity=0.325  Sum_probs=201.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++|++|||||++|||+++|++|+++|++|++++ ++.+.+++..+++...+                        .++.
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~   78 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG------------------------RDFK   78 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTT------------------------CCCE
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC------------------------CceE
Confidence            6789999999999999999999999999999998 66666666666655432                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        79 ~~~~Dl~-~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~  136 (269)
T 3gk3_A           79 AYAVDVA-DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAV---------------------MRTDLD  136 (269)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHH---------------------HHHHhH
Confidence            9999999 999999999999999999999999999988888889999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |++++++.++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       137 ~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  216 (269)
T 3gk3_A          137 AMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV  216 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh
Confidence            99999999999999888899999999999999999999999999999999999999999999999999999999998765


Q ss_pred             ccCCcc-ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPR-ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~-~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...... ......+.+|+..|||+|++.+  +++++...+++|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~p~dvA~~v~--~L~s~~~~~itG  257 (269)
T 3gk3_A          217 PQDVLEAKILPQIPVGRLGRPDEVAALIA--FLCSDDAGFVTG  257 (269)
T ss_dssp             ------CCSGGGCTTSSCBCHHHHHHHHH--HHTSTTCTTCCS
T ss_pred             chhHHHHHhhhcCCcCCccCHHHHHHHHH--HHhCCCcCCeeC
Confidence            433322 2333457899999999999854  566777676666

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.6e-39  Score=322.80  Aligned_cols=236  Identities=24%  Similarity=0.274  Sum_probs=199.9

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHH-HHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL-LQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      ....+++||++|||||++|||+++|++|+++|++|++++|+.+.. +.+.+.+.+.+                       
T Consensus        40 ~~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------   96 (291)
T 3ijr_A           40 KGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG-----------------------   96 (291)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-----------------------
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-----------------------
Confidence            345678999999999999999999999999999999999987654 33444443322                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                       .++.++.+|++ |.++++++++++.+++|++|+||||||+... .++.+.+.++|+.+                     
T Consensus        97 -~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~---------------------  153 (291)
T 3ijr_A           97 -VKCVLLPGDLS-DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT---------------------  153 (291)
T ss_dssp             -CCEEEEESCTT-SHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHH---------------------
T ss_pred             -CcEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHH---------------------
Confidence             56889999999 9999999999999999999999999998754 57888899999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|++  .|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       154 ~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T  231 (291)
T 3ijr_A          154 FRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWT  231 (291)
T ss_dssp             HHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             HHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcC
Confidence            999999999999999999964  489999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++......... .......+++|++.|||+|++.+  |++++...+++|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~--~L~s~~~~~itG  278 (291)
T 3ijr_A          232 PLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYV--YLASSDSSYVTG  278 (291)
T ss_dssp             THHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHH--HHHSGGGTTCCS
T ss_pred             CcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHH--HHhCCccCCCcC
Confidence            97643321111 11223457899999999998764  566776677666

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-39  Score=313.68  Aligned_cols=228  Identities=24%  Similarity=0.320  Sum_probs=195.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++                            . +.
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------------------~-~~   52 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----------------------------G-AH   52 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------------------T-CE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------------------------C-CE
Confidence            577999999999999999999999999999999999988776654322                            1 45


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     +++|+.
T Consensus        53 ~~~~D~~-~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~  110 (245)
T 1uls_A           53 PVVMDVA-DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELV---------------------LRVNLT  110 (245)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHHH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhH
Confidence            7889999 999999999999999999999999999987778888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|++++.|+||++||.+ ..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       111 g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  189 (245)
T 1uls_A          111 GSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV  189 (245)
T ss_dssp             HHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc
Confidence            9999999999999988889999999999 888899999999999999999999999999999999999999999987643


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ............+.+|++.|||+|++.+.  ++++...+++|
T Consensus       190 ~~~~~~~~~~~~p~~~~~~~~dvA~~v~~--l~s~~~~~~tG  229 (245)
T 1uls_A          190 PEKVREKAIAATPLGRAGKPLEVAYAALF--LLSDESSFITG  229 (245)
T ss_dssp             CHHHHHHHHHTCTTCSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             CHHHHHHHHhhCCCCCCcCHHHHHHHHHH--HhCchhcCCcC
Confidence            21111111122477899999999998654  45555555555

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.2e-39  Score=318.89  Aligned_cols=231  Identities=23%  Similarity=0.280  Sum_probs=195.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------hhHHHHHHHHHHHhCCCCcchhhhhHHHh
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD------------EKKLLQAQEEIKKACPNPKFIRFIEYEEI  160 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  160 (475)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+            .+.++++.+++...+              
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------   73 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--------------   73 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--------------
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--------------
Confidence            457889999999999999999999999999999999987            777777777776654              


Q ss_pred             hhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchh
Q psy3252         161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRL  240 (475)
Q Consensus       161 ~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (475)
                                .++.++.+|++ |.++++++++++.+++|++|+||||||+.....    +.++|+.+             
T Consensus        74 ----------~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~-------------  125 (278)
T 3sx2_A           74 ----------SRIVARQADVR-DRESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDV-------------  125 (278)
T ss_dssp             ----------CCEEEEECCTT-CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHH-------------
T ss_pred             ----------CeEEEEeCCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHH-------------
Confidence                      56889999999 999999999999999999999999999875432    57788877             


Q ss_pred             hccccchhhhhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccC----CCChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         241 ALWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGI----YGLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       241 ~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~----~~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                              +++|+.|+++++++++|.|.+++ .|+||++||.++..+.    ++...|++||+|+++|+++|+.|++++|
T Consensus       126 --------~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g  197 (278)
T 3sx2_A          126 --------IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQM  197 (278)
T ss_dssp             --------HHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             --------HHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccC
Confidence                    99999999999999999998865 6899999999998877    6778999999999999999999999999


Q ss_pred             cEEEEEeCCCCCCCCCcccccCC-----------ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         316 LTITLCLPPDTDTPGFENEEKSK-----------PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       316 IrVn~V~PG~v~T~~~~~~~~~~-----------~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+||+|+||+|+|++........           ........+ +++..|||||++.  +|++++...+++|
T Consensus       198 i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v--~~l~s~~~~~itG  266 (278)
T 3sx2_A          198 IRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAV--AWLVSDQARYITG  266 (278)
T ss_dssp             EEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHH--HHHTSGGGTTCCS
T ss_pred             cEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHH--HHHhCcccccccC
Confidence            99999999999999876421100           001111234 7899999999975  4567776677666

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=7.5e-40  Score=321.11  Aligned_cols=219  Identities=24%  Similarity=0.335  Sum_probs=191.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.++++++..                              .++.
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~------------------------------~~~~   62 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL------------------------------PNTL   62 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC------------------------------TTEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc------------------------------CCce
Confidence            4678999999999999999999999999999999999876543210                              3577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+.+|++|+||||||+....++.+.+.++|+++                     +++|+.
T Consensus        63 ~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~vN~~  120 (266)
T 3p19_A           63 CAQVDVT-DKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRM---------------------FDVNVL  120 (266)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHH---------------------HHHHTH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHHhH
Confidence            8999999 999999999999999999999999999988888899999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       121 g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  200 (266)
T 3p19_A          121 GLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHT  200 (266)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcc
Confidence            99999999999999888899999999999999999999999999999999999999999999999999999999987654


Q ss_pred             ccCCcc--ccccccccCCCCChHHhhhccceee
Q psy3252         335 EKSKPR--ETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       335 ~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ......  ......+++|++.|||||++.+.+.
T Consensus       201 ~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~  233 (266)
T 3p19_A          201 TSQQIKDGYDAWRVDMGGVLAADDVARAVLFAY  233 (266)
T ss_dssp             SCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHH
T ss_pred             cchhhhHHHHhhcccccCCCCHHHHHHHHHHHH
Confidence            322111  1111347899999999999865533

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.2e-39  Score=316.35  Aligned_cols=236  Identities=25%  Similarity=0.323  Sum_probs=203.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+                       .++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------~~~   59 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-----------------------VRV   59 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----------------------CCE
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC-----------------------Cce
Confidence            467899999999999999999999999999999999999988888877765411                       457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+
T Consensus        60 ~~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  117 (263)
T 3ai3_A           60 LEVAVDVA-TPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFY---------------------WELLV  117 (263)
T ss_dssp             EEEECCTT-SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHHh
Confidence            88999999 999999999999999999999999999987778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       118 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  197 (263)
T 3ai3_A          118 MAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIK  197 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhh
Confidence            99999999999999987789999999999999999999999999999999999999999999999999999999997543


Q ss_pred             cccC--------Ccc---ccccc-cccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKS--------KPR---ETSLI-SQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~--------~~~---~~~~~-~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ....        .+.   ..... .|++++..|||+|++.+  +++.+...+++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~--~l~s~~~~~~~G  250 (263)
T 3ai3_A          198 TAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFV--FLCSERATYSVG  250 (263)
T ss_dssp             HHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHH--HHTSTTCTTCCS
T ss_pred             hhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHH--HHcCccccCCCC
Confidence            2110        000   00111 57789999999999865  455555555555

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=3.3e-39  Score=320.89  Aligned_cols=235  Identities=20%  Similarity=0.220  Sum_probs=200.7

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC--hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD--EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~--~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+  .+.++++.+.+.+.+                       
T Consensus        43 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-----------------------   99 (294)
T 3r3s_A           43 GSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-----------------------   99 (294)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-----------------------
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-----------------------
Confidence            4567899999999999999999999999999999999987  345566666665543                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                       .++.++.+|++ |.++++++++++.+++|++|+||||||+.. ..++.+.+.++|+.+                     
T Consensus       100 -~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------  156 (294)
T 3r3s_A          100 -RKAVLLPGDLS-DESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQT---------------------  156 (294)
T ss_dssp             -CCEEECCCCTT-SHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHH---------------------
T ss_pred             -CcEEEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHH---------------------
Confidence             56889999999 999999999999999999999999999865 467889999999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|.+  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       157 ~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  234 (294)
T 3r3s_A          157 FAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWT  234 (294)
T ss_dssp             HHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             HHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcc
Confidence            999999999999999999965  489999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccC--CccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKS--KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~--~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++.......  .........+++|++.|||+|++.  +|++++..++++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v--~~L~s~~~~~itG  282 (294)
T 3r3s_A          235 ALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVY--VYLASQESSYVTA  282 (294)
T ss_dssp             HHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHH--HHHHSGGGTTCCS
T ss_pred             ccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCccccCCCC
Confidence            973321111  111222345889999999999875  4577777777766

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.3e-39  Score=317.20  Aligned_cols=231  Identities=28%  Similarity=0.339  Sum_probs=199.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH--HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK--LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ||++|||||++|||+++|++|+++|++|++++|+.++  ++++.+++...+                        .++.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------------------------~~~~~   57 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD------------------------QKAVF   57 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT------------------------CCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC------------------------CcEEE
Confidence            7899999999999999999999999999999999887  777777775432                        46888


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.|
T Consensus        58 ~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~g  115 (258)
T 3a28_C           58 VGLDVT-DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQI---------------------YSVNVFS  115 (258)
T ss_dssp             EECCTT-CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTHH
T ss_pred             EEccCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHhccHH
Confidence            999999 999999999999999999999999999987778889999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCC-CeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         256 TIHMTKALVEGMKQRGR-GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~-g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +++++++++|.|.+++. |+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       116 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  195 (258)
T 3a28_C          116 VFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQI  195 (258)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhh
Confidence            99999999999998776 99999999999999999999999999999999999999999999999999999999986542


Q ss_pred             c--------cC-Ccc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 E--------KS-KPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~--------~~-~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .        .. ...  ......|++|++.|||+|++.+  +++++...+++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~--~l~s~~~~~~tG  246 (258)
T 3a28_C          196 DAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVS--FLASENSNYVTG  246 (258)
T ss_dssp             HHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHH--HHhCcccCCCCC
Confidence            1        10 110  1112247889999999999865  455665566665

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=7.1e-40  Score=318.12  Aligned_cols=236  Identities=22%  Similarity=0.289  Sum_probs=203.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ....++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++.+.+                        .
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~   63 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG------------------------F   63 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT------------------------C
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------------------------C
Confidence            3456789999999999999999999999999999988 77777777777776543                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++
T Consensus        64 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~v  121 (256)
T 3ezl_A           64 DFYASEGNVG-DWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAV---------------------IDT  121 (256)
T ss_dssp             CCEEEECCTT-CHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHH
T ss_pred             eeEEEecCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHH---------------------HHH
Confidence            6788999999 999999999999999999999999999988888889999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       122 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  201 (256)
T 3ezl_A          122 NLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV  201 (256)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccc
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...............+.++++.|||+|++.+  +++++...+++|
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~--~l~s~~~~~~tG  244 (256)
T 3ezl_A          202 KAIRPDVLEKIVATIPVRRLGSPDEIGSIVA--WLASEESGFSTG  244 (256)
T ss_dssp             HTSCHHHHHHHHHHSTTSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             cccCHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCCcccCCcC
Confidence            6543322222233457899999999999754  455666666655

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-39  Score=315.85  Aligned_cols=231  Identities=29%  Similarity=0.370  Sum_probs=200.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++.++.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~~   57 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG------------------------GHAVAVK   57 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------CcEEEEE
Confidence            6899999999999999999999999999999999998888888776543                        4578899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.|++
T Consensus        58 ~D~~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~g~~  115 (256)
T 1geg_A           58 VDVS-DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKV---------------------YNINVKGVI  115 (256)
T ss_dssp             CCTT-SHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHTHHHH
T ss_pred             ecCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 999999999999999999999999999987778888999999988                     999999999


Q ss_pred             HHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         258 HMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       258 ~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      +++++++|.|.+++ .|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++......
T Consensus       116 ~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  195 (256)
T 1geg_A          116 WGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDR  195 (256)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhh
Confidence            99999999999876 68999999999999999999999999999999999999999999999999999999997654210


Q ss_pred             ---------CCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         337 ---------SKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       337 ---------~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                               ...  .......|++|++.|||+|++.+  +++++...+++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~--~l~s~~~~~~tG  244 (256)
T 1geg_A          196 QVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVS--YLASPDSDYMTG  244 (256)
T ss_dssp             HHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCccccCCCC
Confidence                     111  01112247789999999999864  445555555555

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=3.4e-39  Score=314.64  Aligned_cols=236  Identities=22%  Similarity=0.253  Sum_probs=200.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+.                      .++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------------------~~~   60 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSG----------------------AQV   60 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT----------------------CCE
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC----------------------CeE
Confidence            4578999999999999999999999999999999999999888888877643110                      257


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++| +|+||||||+....++.+.+.++|+.+                     +++|+
T Consensus        61 ~~~~~D~~-~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  117 (260)
T 2z1n_A           61 DIVAGDIR-EPGDIDRLFEKARDLGG-ADILVYSTGGPRPGRFMELGVEDWDES---------------------YRLLA  117 (260)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHTTC-CSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHTH
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHhcC-CCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHHh
Confidence            88999999 99999999999999999 999999999887778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|.+++.|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       118 ~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  197 (260)
T 2z1n_A          118 RSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRS  197 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhh
Confidence            99999999999999988889999999999999999999999999999999999999999999999999999999998762


Q ss_pred             ----------cccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 ----------EEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ----------~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                                ..... ........|++|++.|||+|++.+.  ++++...+++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~--l~s~~~~~~tG  249 (260)
T 2z1n_A          198 LAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAF--LASEKASFITG  249 (260)
T ss_dssp             ----------------------CCTTSSCCCHHHHHHHHHH--HTSGGGTTCCS
T ss_pred             hhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHH--HhCccccCCCC
Confidence                      11110 1111123477899999999998654  45555555555

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.7e-39  Score=314.55  Aligned_cols=231  Identities=23%  Similarity=0.304  Sum_probs=198.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        .++.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~~~   54 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---G------------------------DAAR   54 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---G------------------------GGEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C------------------------Ccee
Confidence            367899999999999999999999999999999999988877665544   1                        4578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        55 ~~~~D~~-~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~  112 (254)
T 1hdc_A           55 YQHLDVT-IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKV---------------------VEINLT  112 (254)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHH---------------------HHHHTH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhH
Confidence            8999999 999999999999999999999999999987778888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |++++++.++|.|++++.|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus       113 g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  192 (254)
T 1hdc_A          113 GVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET  192 (254)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccccc
Confidence            99999999999999887899999999999999999999999999999999999999999999999999999999976542


Q ss_pred             ccCCccccccccccCCCC-ChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPRETSLISQTGGLY-RPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~-~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ............+++|++ .|||+|++.+.  ++++...+++|
T Consensus       193 ~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~--l~s~~~~~~tG  233 (254)
T 1hdc_A          193 GIRQGEGNYPNTPMGRVGNEPGEIAGAVVK--LLSDTSSYVTG  233 (254)
T ss_dssp             TCCCSTTSCTTSTTSSCB-CHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             chhHHHHHHhcCCCCCCCCCHHHHHHHHHH--HhCchhcCCCC
Confidence            211111111224678899 99999998654  44454445554

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.2e-40  Score=323.74  Aligned_cols=232  Identities=22%  Similarity=0.223  Sum_probs=194.0

Q ss_pred             cccccccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCC
Q psy3252          86 PHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACP  165 (475)
Q Consensus        86 ~~~~~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  165 (475)
                      .+..+..+++++||++|||||++|||+++|++|+++|++|++++|+.+.++                             
T Consensus        16 ~~~~~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------------------------   66 (266)
T 3uxy_A           16 ENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------------------------   66 (266)
T ss_dssp             ----------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------------------------
T ss_pred             CCcchhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------------------------
Confidence            344566678899999999999999999999999999999999999865321                             


Q ss_pred             CCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhcccc
Q psy3252         166 NPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS  245 (475)
Q Consensus       166 ~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (475)
                            ....+.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                  
T Consensus        67 ------~~~~~~~Dv~-~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~------------------  121 (266)
T 3uxy_A           67 ------ADLHLPGDLR-EAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS------------------  121 (266)
T ss_dssp             ------CSEECCCCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHH------------------
T ss_pred             ------hhhccCcCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHH------------------
Confidence                  1133579999 999999999999999999999999999988888899999999988                  


Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         246 WTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       246 ~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                         +++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+
T Consensus       122 ---~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~  198 (266)
T 3uxy_A          122 ---LGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNE  198 (266)
T ss_dssp             ---HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred             ---HHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCC
Confidence               99999999999999999999988899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCc-------cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         326 TDTPGFENEEKSKP-------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       326 v~T~~~~~~~~~~~-------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+|++.........       .......+++|++.|||+|++.+  +++++...+++|
T Consensus       199 v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~--~L~s~~~~~itG  254 (266)
T 3uxy_A          199 VNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVL--FLASDAARYLCG  254 (266)
T ss_dssp             BCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             CcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCCcC
Confidence            99998654322111       11222457899999999999854  566766666666

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=4.8e-39  Score=313.34  Aligned_cols=238  Identities=23%  Similarity=0.246  Sum_probs=202.7

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .+..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        
T Consensus         7 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------   62 (260)
T 2zat_A            7 ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG------------------------   62 (260)
T ss_dssp             ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------
Confidence            34456789999999999999999999999999999999999998888888776543                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      .++.++.+|++ |.++++++++++.+.+|++|+||||||+.. ..++.+.+.++|+.+                     +
T Consensus        63 ~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~---------------------~  120 (260)
T 2zat_A           63 LSVTGTVCHVG-KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKI---------------------L  120 (260)
T ss_dssp             CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHH---------------------H
T ss_pred             CceEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHH---------------------H
Confidence            45788999999 999999999999999999999999999864 367788899999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus       121 ~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  200 (260)
T 2zat_A          121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTN  200 (260)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCc
Confidence            99999999999999999998888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +.........  .......+.+|++.|||+|++.+  +++++...+++|
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~--~l~s~~~~~~tG  247 (260)
T 2zat_A          201 FSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVS--FLCSEDASYITG  247 (260)
T ss_dssp             TTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHH--HHTSGGGTTCCS
T ss_pred             cchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHH--HHcCcccCCccC
Confidence            8653211111  11112347789999999999754  455555555555

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=3.7e-39  Score=315.17  Aligned_cols=219  Identities=16%  Similarity=0.102  Sum_probs=179.8

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+.+++.+.   +.+.                          
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--------------------------   71 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA--------------------------   71 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH--------------------------
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc--------------------------
Confidence            45789999999999999999999999999999999999998765432   2221                          


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .+.++.+|++ |.++++++++++.+++|++|+||||||+..... .+.+.++|+.+                     +++
T Consensus        72 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~---------------------~~v  128 (260)
T 3gem_A           72 GAVALYGDFS-CETGIMAFIDLLKTQTSSLRAVVHNASEWLAET-PGEEADNFTRM---------------------FSV  128 (260)
T ss_dssp             TCEEEECCTT-SHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHH---------------------HHH
T ss_pred             CCeEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCccCCCC-CCCCHHHHHHH---------------------HHH
Confidence            2567899999 999999999999999999999999999876554 56677888877                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||+|+++|+++|+.|+++ +|+||+|+||+|.|++.
T Consensus       129 N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~  207 (260)
T 3gem_A          129 HMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPK  207 (260)
T ss_dssp             HTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC---
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCC
Confidence            99999999999999999988899999999999999999999999999999999999999999 69999999999999975


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceee
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ....  .........+++|++.|||++++.+.+.
T Consensus       208 ~~~~--~~~~~~~~~p~~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          208 DDAA--YRANALAKSALGIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             --------------CCSCCCCCTHHHHHHHHHHH
T ss_pred             CCHH--HHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            4221  1112223458899999999999877664

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=5.5e-39  Score=319.30  Aligned_cols=234  Identities=12%  Similarity=0.090  Sum_probs=194.0

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          93 YLAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        93 ~~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +.+++||++|||||+  +|||+++|++|+++|++|++++|+.+..+. .+++.+..                        
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~------------------------   80 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEEL------------------------   80 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHH------------------------
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhc------------------------
Confidence            456899999999999  559999999999999999999999654443 33333322                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc----CCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL----CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                      .++.++.+|++ |.++++++++++.+++|+||+||||||+..    ..++.+.+.++|+.+                   
T Consensus        81 ~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~-------------------  140 (293)
T 3grk_A           81 GAFVAGHCDVA-DAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNT-------------------  140 (293)
T ss_dssp             TCEEEEECCTT-CHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHH-------------------
T ss_pred             CCceEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHH-------------------
Confidence            34778999999 999999999999999999999999999875    467888999999988                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                        +++|+.|+++++++++|.|.+  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|
T Consensus       141 --~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  216 (293)
T 3grk_A          141 --MLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPI  216 (293)
T ss_dssp             --HHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred             --HHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCC
Confidence              999999999999999999975  5899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         327 DTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       327 ~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +|++.........  .......+++|++.|||+|++.  +|++++...+++|-
T Consensus       217 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~~L~s~~~~~itG~  267 (293)
T 3grk_A          217 KTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVG--LYFLSDLSRSVTGE  267 (293)
T ss_dssp             CC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             cchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHcCccccCCcce
Confidence            9998765432111  1122345889999999999885  45667766777663

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.4e-39  Score=319.39  Aligned_cols=242  Identities=16%  Similarity=0.172  Sum_probs=192.9

Q ss_pred             cccccccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcC
Q psy3252          86 PHLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKAC  164 (475)
Q Consensus        86 ~~~~~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (475)
                      ++...+..++++||++|||||++|||+++|++|+++|++|++++|+. ++++++.+++.+..+                 
T Consensus        11 ~~~~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-----------------   73 (288)
T 2x9g_A           11 SSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS-----------------   73 (288)
T ss_dssp             -----------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST-----------------
T ss_pred             ccccCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC-----------------
Confidence            34455666778999999999999999999999999999999999998 888888887763322                 


Q ss_pred             CCCCccceEEEEEeecCCC----HHHHHHHHHHHHHhcCCccEEEEccccccCCCc-----cc-----CCHHHHHHhhhh
Q psy3252         165 PNPKFIRFIEYVSLDISKD----YENIRSALQPAMDRCGPVYMLVNCAGMALCGTL-----EE-----MTMQDIKVMEQP  230 (475)
Q Consensus       165 ~~~~~~~~v~~~~~Dvt~d----~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~-----~~-----~~~~~~~~~~~~  230 (475)
                            .++.++.+|++ |    .++++++++++.+.+|++|+||||||+....++     .+     .+.++++.+   
T Consensus        74 ------~~~~~~~~Dv~-~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  143 (288)
T 2x9g_A           74 ------NTAVVCQADLT-NSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAEL---  143 (288)
T ss_dssp             ------TCEEEEECCCS-CSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHH---
T ss_pred             ------CceEEEEeecC-CccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHH---
Confidence                  46888999999 9    999999999999999999999999998766666     55     677788877   


Q ss_pred             hhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCC------CCeEEEeccccccccCCCChhhHHHHHHHHHHH
Q psy3252         231 LWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG------RGCIVITASQAANLGIYGLAAYTSSKFALKGFA  304 (475)
Q Consensus       231 ~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~------~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~  304 (475)
                                        +++|+.|++++++.++|.|.+++      .|+||++||.++..+.++...|++||+|+++|+
T Consensus       144 ------------------~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  205 (288)
T 2x9g_A          144 ------------------IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLT  205 (288)
T ss_dssp             ------------------HHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ------------------HHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHH
Confidence                              99999999999999999998876      689999999999999999999999999999999


Q ss_pred             HHHHHHHccCCcEEEEEeCCCCCCCCCcccccCCccccccccccCCC-CChHHhhhccceeeecCCCCCCCCC
Q psy3252         305 EALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGL-YRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       305 ~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++|+.|++++||+||+|+||+|+|++ . .............+++|+ +.|||+|++.+.  ++++...+++|
T Consensus       206 ~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~~~~~~~~~~~p~~r~~~~pedvA~~v~~--l~s~~~~~itG  274 (288)
T 2x9g_A          206 QSAALELAPYGIRVNGVAPGVSLLPV-A-MGEEEKDKWRRKVPLGRREASAEQIADAVIF--LVSGSAQYITG  274 (288)
T ss_dssp             HHHHHHHGGGTEEEEEEEESSCSCCT-T-SCHHHHHHHHHTCTTTSSCCCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             HHHHHHhhccCeEEEEEEeccccCcc-c-cChHHHHHHHhhCCCCCCCCCHHHHHHHHHH--HhCccccCccC
Confidence            99999999999999999999999998 3 111000111112477888 999999998654  45555566655

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.5e-39  Score=318.88  Aligned_cols=237  Identities=27%  Similarity=0.361  Sum_probs=204.3

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .|.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~   71 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------------------------V   71 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------C
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------C
Confidence            3446889999999999999999999999999999999999998888888876543                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++
T Consensus        72 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~  129 (277)
T 2rhc_B           72 EADGRTCDVR-SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDV---------------------VET  129 (277)
T ss_dssp             CEEEEECCTT-CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHH---------------------HHH
T ss_pred             ceEEEECCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHH
Confidence            5788999999 999999999999999999999999999987778888999999988                     999


Q ss_pred             hHHHHHHHHHHHHHH--HHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEG--MKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       252 N~~g~~~l~~~~lp~--m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      |+.|+++++++++|.  |.+++.|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus       130 N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  209 (277)
T 2rhc_B          130 NLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP  209 (277)
T ss_dssp             HTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSH
T ss_pred             HhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCc
Confidence            999999999999999  988777999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccc---C------Cc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEK---S------KP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~---~------~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +......   .      ..  .......+++|++.|||+|++.+.  ++.+...+++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~--l~s~~~~~~tG  265 (277)
T 2rhc_B          210 MAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY--LIGPGAAAVTA  265 (277)
T ss_dssp             HHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             hhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCchhcCCCC
Confidence            7553210   0      00  011122478899999999998654  45555555555

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=8.6e-39  Score=315.80  Aligned_cols=231  Identities=19%  Similarity=0.220  Sum_probs=192.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++    +                       .++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-----------------------~~~   53 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----G-----------------------GNA   53 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----B-----------------------TTE
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----C-----------------------CcE
Confidence            3578999999999999999999999999999999999998887665442    1                       468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcc----cCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLE----EMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+... ..+.    +.+.++|+.+                     
T Consensus        54 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~---------------------  111 (281)
T 3zv4_A           54 VGVVGDVR-SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDI---------------------  111 (281)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHH---------------------
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHH---------------------
Confidence            88999999 9999999999999999999999999998643 2333    3345567766                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|.+++ |+||++||..+..+.++...|++||+|+++|+++|+.|++++ |+||+|+||+|+|
T Consensus       112 ~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T  189 (281)
T 3zv4_A          112 FHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNT  189 (281)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC
T ss_pred             HhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcC
Confidence            99999999999999999998754 999999999999999999999999999999999999999997 9999999999999


Q ss_pred             CCCcccccCC--------c--cccccccccCCCCChHHhhhccceeeecC-CCCCCCCCc
Q psy3252         329 PGFENEEKSK--------P--RETSLISQTGGLYRPEVVKQSGLTITLCL-PPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~--------~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~-~~~~~~~g~  377 (475)
                      ++........        +  .......|++|+++|||+|++.  +|+++ +...+++|-
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~fL~s~~~~~~itG~  247 (281)
T 3zv4_A          190 DLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAY--VFFATRGDSLPATGA  247 (281)
T ss_dssp             --CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHH--HHHHSTTTSTTCSSC
T ss_pred             CcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHH--HHhhcccccccccCc
Confidence            9875422111        1  1112245889999999999874  56777 666667763

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-39  Score=321.08  Aligned_cols=240  Identities=23%  Similarity=0.276  Sum_probs=200.9

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ..+++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+..                     .
T Consensus        19 ~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------------------~   77 (297)
T 1xhl_A           19 SHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP---------------------A   77 (297)
T ss_dssp             ----CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------------------G
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC---------------------C
Confidence            3456789999999999999999999999999999999999999998888887654310                     0


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC--cccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT--LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      .++.++.+|++ |.++++++++++.+++|++|+||||||+....+  +.+.+.++|+.+                     
T Consensus        78 ~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~---------------------  135 (297)
T 1xhl_A           78 EKINAVVADVT-EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKT---------------------  135 (297)
T ss_dssp             GGEEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHH---------------------
T ss_pred             ceEEEEecCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHH---------------------
Confidence            26889999999 999999999999999999999999999876666  888999999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC-CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI-YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++|+.|+++++++++|.|.+++ |+||++||.++..+. ++...|++||+|+++|+++++.|++++||+||+|+||+|+
T Consensus       136 ~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~  214 (297)
T 1xhl_A          136 FKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVA  214 (297)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             HhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence            99999999999999999999876 999999999998888 8899999999999999999999999999999999999999


Q ss_pred             CCCCcccccCC-------c--cccccccccCCCCChHHhhhccceeeecCCC-CCCCCC
Q psy3252         328 TPGFENEEKSK-------P--RETSLISQTGGLYRPEVVKQSGLTITLCLPP-DTDTPG  376 (475)
Q Consensus       328 T~~~~~~~~~~-------~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~-~~~~~g  376 (475)
                      |++........       .  .......|++|++.|||||++.+.  ++.+. ..+++|
T Consensus       215 T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~--l~s~~~~~~itG  271 (297)
T 1xhl_A          215 TGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVF--LADRNLSSYIIG  271 (297)
T ss_dssp             SSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH--HHCHHHHTTCCS
T ss_pred             CccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCCcccCCccC
Confidence            99765431000       0  011112477899999999998654  44444 444444

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.7e-39  Score=311.18  Aligned_cols=233  Identities=22%  Similarity=0.226  Sum_probs=173.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .+
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~   59 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG------------------------GT   59 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CE
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------------------------Cc
Confidence            467889999999999999999999999999999999999999999988887654                        57


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc---cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA---LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      +.++.+|++ |.++++++++++.+.++++|+||||||+.   ...++.+.+.++++.+                     +
T Consensus        60 ~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~---------------------~  117 (253)
T 3qiv_A           60 AISVAVDVS-DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKF---------------------M  117 (253)
T ss_dssp             EEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHH---------------------H
T ss_pred             EEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHH---------------------H
Confidence            889999999 99999999999999999999999999984   4456778899999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ++|+.|+++++++++|.|.+++.|+||++||.++.   ++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       118 ~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  194 (253)
T 3qiv_A          118 SVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTE  194 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------
T ss_pred             hhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCccc
Confidence            99999999999999999999888999999999876   456789999999999999999999999999999999999999


Q ss_pred             CCcccccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +......... .......+.++++.|||++++.+  +++.+...+++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~--~l~s~~~~~~tG  240 (253)
T 3qiv_A          195 ANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCL--FLLSDEASWITG  240 (253)
T ss_dssp             -------------------------CCHHHHHHH--HHHSGGGTTCCS
T ss_pred             chhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHH--HHcCccccCCCC
Confidence            8765432211 11222347789999999999865  455555555554

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-38  Score=318.45  Aligned_cols=253  Identities=17%  Similarity=0.194  Sum_probs=203.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-----hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-----EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++|+     .++++++.+.+...+                       
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~-----------------------   58 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDND-----------------------   58 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHT-----------------------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcC-----------------------
Confidence            4678999999999999999999999999999988775     556666666665543                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ |.++++++++++.+++|++|+||||||+...+++.+.+.++++.+                     +
T Consensus        59 -~~~~~~~~Dvt-d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~---------------------~  115 (324)
T 3u9l_A           59 -VDLRTLELDVQ-SQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAEL---------------------Y  115 (324)
T ss_dssp             -CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHH---------------------H
T ss_pred             -CcEEEEEeecC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------H
Confidence             56889999999 999999999999999999999999999988889999999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.|+++++++++|.|++++.|+||++||.++.. +.++.+.|++||+|+++|+++|+.|++++||+||+|+||.|.|
T Consensus       116 ~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t  195 (324)
T 3u9l_A          116 DINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTS  195 (324)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC--
T ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCcccc
Confidence            999999999999999999998889999999999885 4567889999999999999999999999999999999999998


Q ss_pred             CCCcccccCCcc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHH
Q psy3252         329 PGFENEEKSKPR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAK  405 (475)
Q Consensus       329 ~~~~~~~~~~~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~  405 (475)
                      ++........+.   ......+.++.+.|++++.....  +++                           ...+|++||+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~---------------------------~~~~p~~vA~  246 (324)
T 3u9l_A          196 GTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAA--IVP---------------------------PDADVSLVAD  246 (324)
T ss_dssp             -------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHH--TSC---------------------------TTCCTHHHHH
T ss_pred             CchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHH--hcC---------------------------CCCCHHHHHH
Confidence            754322211111   11223355778888888865322  111                           1368999999


Q ss_pred             HHHHHHhcC----CeeEEeCc
Q psy3252         406 QLLEDALKG----NYFSTVGL  422 (475)
Q Consensus       406 ~i~~ai~~g----~~~~~~~~  422 (475)
                      ++++++...    ..++.+|+
T Consensus       247 aiv~~~~~~~~~~~~~~~~gp  267 (324)
T 3u9l_A          247 AIVRVVGTASGKRPFRVHVDP  267 (324)
T ss_dssp             HHHHHHTSCTTCCCSEEEECT
T ss_pred             HHHHHhcCCCCCCCeEEEeCC
Confidence            999999865    45666764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.3e-39  Score=319.87  Aligned_cols=227  Identities=26%  Similarity=0.312  Sum_probs=194.4

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +...+++||++|||||++|||+++|++|+++|++|++++|+.+...                                  
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----------------------------------   52 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----------------------------------   52 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----------------------------------
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----------------------------------
Confidence            3456788999999999999999999999999999999999865321                                  


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ..+..+.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     ++
T Consensus        53 ~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~  110 (269)
T 3vtz_A           53 NVSDHFKIDVT-NEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRI---------------------ID  110 (269)
T ss_dssp             TSSEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHH---------------------HH
T ss_pred             CceeEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HH
Confidence            23457899999 999999999999999999999999999988888899999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|+++ ||+||+|+||+|+|++
T Consensus       111 vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~  189 (269)
T 3vtz_A          111 VNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPM  189 (269)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHH
T ss_pred             HhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcc
Confidence            999999999999999999888899999999999999999999999999999999999999998 8999999999999998


Q ss_pred             CcccccC-----C------ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKS-----K------PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~-----~------~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......     .      ........+++|++.|||||++.  +|++++...+++|
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v--~~L~s~~~~~itG  244 (269)
T 3vtz_A          190 VIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVV--AFLASDRSSFITG  244 (269)
T ss_dssp             HHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHH--HHHHSGGGTTCCS
T ss_pred             hhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCCccCCCcC
Confidence            6533210     0      01111235889999999999975  4566776677666

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.6e-39  Score=315.09  Aligned_cols=238  Identities=21%  Similarity=0.216  Sum_probs=206.6

Q ss_pred             ccCCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHH-HHHHHHHHHhCCCCcchhhhhHHHhhhcCCCC
Q psy3252          91 KRYLAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKL-LQAQEEIKKACPNPKFIRFIEYEEIKKACPNP  167 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
                      .++++++||++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.+..+                    
T Consensus        13 ~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~--------------------   72 (267)
T 3gdg_A           13 LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG--------------------   72 (267)
T ss_dssp             HHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHC--------------------
T ss_pred             ccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcC--------------------
Confidence            44578999999999999  9999999999999999999999886554 666666655432                    


Q ss_pred             CccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         168 KFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       168 ~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                         .++.++.+|++ |.++++++++++.+++|+||+||||||+....++.+.+.++++.+                    
T Consensus        73 ---~~~~~~~~Dl~-~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~--------------------  128 (267)
T 3gdg_A           73 ---IKAKAYKCQVD-SYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHV--------------------  128 (267)
T ss_dssp             ---CCEECCBCCTT-CHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHH--------------------
T ss_pred             ---CceeEEecCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH--------------------
Confidence               56889999999 999999999999999999999999999988888889999999988                    


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC--CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI--YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                       +++|+.|+++++++++|.|++++.|+||++||.++..+.  ++...|++||+|+++|+++|+.|+++. |+||+|+||+
T Consensus       129 -~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~  206 (267)
T 3gdg_A          129 -VQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGY  206 (267)
T ss_dssp             -HHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECC
T ss_pred             -HHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCc
Confidence             999999999999999999999888999999999998776  578999999999999999999999988 9999999999


Q ss_pred             CCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         326 TDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       326 v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+|++................+++|++.|||++++.  ++++++...+++|
T Consensus       207 v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~--~~l~s~~~~~itG  255 (267)
T 3gdg_A          207 IDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAY--VYFASDASTYTTG  255 (267)
T ss_dssp             EECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHH--HHHHSTTCTTCCS
T ss_pred             cccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHh--heeecCccccccC
Confidence            999987654333223333456889999999999985  4667777777776

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-38  Score=307.07  Aligned_cols=228  Identities=23%  Similarity=0.262  Sum_probs=199.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.                       ..+
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~   66 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ-----------------------PQP   66 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS-----------------------CCC
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-----------------------CCc
Confidence            457899999999999999999999999999999999999999999998877642                       234


Q ss_pred             EEEEeec--CCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         174 EYVSLDI--SKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       174 ~~~~~Dv--t~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.+|+  + +.++++++++++.+.+|++|+||||||+. ...++.+.+.++++.+                     ++
T Consensus        67 ~~~~~d~d~~-~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~  124 (247)
T 3i1j_A           67 LIIALNLENA-TAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQV---------------------MH  124 (247)
T ss_dssp             EEEECCTTTC-CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHH---------------------HH
T ss_pred             eEEEeccccC-CHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHH---------------------HH
Confidence            5666776  9 99999999999999999999999999986 4467888999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ-SGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~-~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|+++++++++|.|++++.|+||++||..+..+.++...|++||+|+++|+++|+.|+++ .||+||+|+||+|+|+
T Consensus       125 ~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~  204 (247)
T 3i1j_A          125 VNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG  204 (247)
T ss_dssp             HHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH
T ss_pred             HhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc
Confidence            999999999999999999888899999999999999999999999999999999999999987 8999999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +........        ...+...|||++++.  +|++++...+++|
T Consensus       205 ~~~~~~~~~--------~~~~~~~p~dva~~~--~~l~s~~~~~itG  241 (247)
T 3i1j_A          205 MRAQAYPDE--------NPLNNPAPEDIMPVY--LYLMGPDSTGING  241 (247)
T ss_dssp             HHHHHSTTS--------CGGGSCCGGGGTHHH--HHHHSGGGTTCCS
T ss_pred             cchhccccc--------CccCCCCHHHHHHHH--HHHhCchhccccC
Confidence            765432221        123567899999875  5667777777776

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=9.9e-39  Score=310.77  Aligned_cols=229  Identities=23%  Similarity=0.276  Sum_probs=194.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++ +++.+++                            .+ 
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~----------------------------~~-   51 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI----------------------------GG-   51 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH----------------------------TC-
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh----------------------------hC-
Confidence            45789999999999999999999999999999999999876 5554433                            12 


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+
T Consensus        52 ~~~~~D~~-~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  109 (256)
T 2d1y_A           52 AFFQVDLE-DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRV---------------------LEVNL  109 (256)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHHT
T ss_pred             CEEEeeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHh
Confidence            57899999 999999999999999999999999999987778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       110 ~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  189 (256)
T 2d1y_A          110 TAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE  189 (256)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh
Confidence            99999999999999988889999999999999999999999999999999999999999999999999999999997543


Q ss_pred             c----c-cCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 E----E-KSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~----~-~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .    . ... ........++++++.|||+|++.+.  ++.+...+++|
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~--l~s~~~~~~~G  236 (256)
T 2d1y_A          190 AIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF--LASEKASFITG  236 (256)
T ss_dssp             HHC--------CHHHHTTSTTSSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             ccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCchhcCCCC
Confidence            2    1 111 1111123477899999999998654  44554445544

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=9e-39  Score=315.60  Aligned_cols=235  Identities=17%  Similarity=0.240  Sum_probs=198.4

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.++ ++++.+++.+.+                        
T Consensus        23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------------------------   78 (283)
T 1g0o_A           23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG------------------------   78 (283)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC------------------------
Confidence            3467889999999999999999999999999999999998654 556666665543                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++.+.+|++|+||||||+....++.+.+.++++.+                     ++
T Consensus        79 ~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~  136 (283)
T 1g0o_A           79 SDAACVKANVG-VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRV---------------------FT  136 (283)
T ss_dssp             CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HH
T ss_pred             CCeEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HH
Confidence            46788999999 999999999999999999999999999987778888999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCC-ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~-~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|+++++++++|.|  ++.|+||++||..+..+.++ ...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       137 ~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  214 (283)
T 1g0o_A          137 INTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  214 (283)
T ss_dssp             HHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             HhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence            99999999999999999  35689999999999887764 8999999999999999999999999999999999999999


Q ss_pred             CCcccccC--------Ccc---cccc--ccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKS--------KPR---ETSL--ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~--------~~~---~~~~--~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +.......        .+.   ....  ..+++|++.|||+|++.+  |++++...+++|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~--~l~s~~~~~itG  272 (283)
T 1g0o_A          215 MYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC--FLASNDGGWVTG  272 (283)
T ss_dssp             HHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             hhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHH--HHhCccccCcCC
Confidence            76542110        010   0111  357899999999999864  556665666665

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.7e-39  Score=317.26  Aligned_cols=233  Identities=18%  Similarity=0.255  Sum_probs=196.2

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------hhHHHHHHHHHHHhCCCCcchhhhhHHH
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD------------EKKLLQAQEEIKKACPNPKFIRFIEYEE  159 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~  159 (475)
                      +|.+++||++|||||++|||+++|++|+++|++|++++|+            .+.++++..++...+             
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   70 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-------------   70 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-------------
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-------------
Confidence            3567899999999999999999999999999999999998            777777777776543             


Q ss_pred             hhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccch
Q psy3252         160 IKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTR  239 (475)
Q Consensus       160 ~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (475)
                                 .++.++.+|++ |.++++++++++.+++|++|+||||||+....  .+.+.++|+.+            
T Consensus        71 -----------~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~------------  124 (287)
T 3pxx_A           71 -----------RKAYTAEVDVR-DRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADA------------  124 (287)
T ss_dssp             -----------SCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHH------------
T ss_pred             -----------CceEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHH------------
Confidence                       56889999999 99999999999999999999999999987654  33788889887            


Q ss_pred             hhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHH
Q psy3252         240 LALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALY  308 (475)
Q Consensus       240 ~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa  308 (475)
                               +++|+.|+++++++++|.|.  +.|+||++||.++..+.           ++...|++||+|+++|+++|+
T Consensus       125 ---------~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la  193 (287)
T 3pxx_A          125 ---------FDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLA  193 (287)
T ss_dssp             ---------HHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHH
Confidence                     99999999999999999993  45899999999988765           667899999999999999999


Q ss_pred             HHHccCCcEEEEEeCCCCCCCCCccccc------C--Cccc--------cccccccCCCCChHHhhhccceeeecCCCCC
Q psy3252         309 MEVKQSGLTITLCLPPDTDTPGFENEEK------S--KPRE--------TSLISQTGGLYRPEVVKQSGLTITLCLPPDT  372 (475)
Q Consensus       309 ~El~~~gIrVn~V~PG~v~T~~~~~~~~------~--~~~~--------~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~  372 (475)
                      .|++++||+||+|+||+|+|++......      .  .+..        .....+ +|++.|||||++.  +||+++...
T Consensus       194 ~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v--~fL~s~~a~  270 (287)
T 3pxx_A          194 AQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMP-TPYVEASDISNAV--CFLASDESR  270 (287)
T ss_dssp             HHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHH--HHHHSGGGT
T ss_pred             HHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccC-CCCCCHHHHHhhH--heecchhhc
Confidence            9999999999999999999998764211      0  0000        011123 7899999999875  467777777


Q ss_pred             CCCCc
Q psy3252         373 DTPGF  377 (475)
Q Consensus       373 ~~~g~  377 (475)
                      +++|-
T Consensus       271 ~itG~  275 (287)
T 3pxx_A          271 YVTGL  275 (287)
T ss_dssp             TCCSC
T ss_pred             CCCCc
Confidence            77763

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.2e-39  Score=314.63  Aligned_cols=220  Identities=24%  Similarity=0.274  Sum_probs=191.0

Q ss_pred             ccccccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCC
Q psy3252          87 HLQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPN  166 (475)
Q Consensus        87 ~~~~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  166 (475)
                      ++.+.+++++++|++|||||++|||+++|++|+++|++|++++|+.+..++                             
T Consensus        17 ~~~~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----------------------------   67 (260)
T 3un1_A           17 NLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------------------------   67 (260)
T ss_dssp             ---CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS-----------------------------
T ss_pred             hhhhhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----------------------------
Confidence            344566778999999999999999999999999999999999998643210                             


Q ss_pred             CCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         167 PKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       167 ~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                          .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                   
T Consensus        68 ----~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~-------------------  123 (260)
T 3un1_A           68 ----PDIHTVAGDIS-KPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHN-------------------  123 (260)
T ss_dssp             ----TTEEEEESCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH-------------------
T ss_pred             ----CceEEEEccCC-CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHH-------------------
Confidence                35788999999 999999999999999999999999999988888899999999988                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc--cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANL--GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~--~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                        +++|+.|+++++++++|.|++++.|+||++||..+..  +.++...|++||+|+++|+++|+.|++++||+||+|+||
T Consensus       124 --~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG  201 (260)
T 3un1_A          124 --LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPG  201 (260)
T ss_dssp             --HHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEEC
T ss_pred             --HHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeec
Confidence              9999999999999999999998889999999988764  445568999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCccccccccccCCCCChHHhhhcccee
Q psy3252         325 DTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       325 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      +|+|++.....   ........|++|++.|||||++.+.+
T Consensus       202 ~v~t~~~~~~~---~~~~~~~~p~~r~~~~~dva~av~~L  238 (260)
T 3un1_A          202 VIKTPMHPAET---HSTLAGLHPVGRMGEIRDVVDAVLYL  238 (260)
T ss_dssp             CBCCTTSCGGG---HHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             CCCCCCCCHHH---HHHHhccCCCCCCcCHHHHHHHHHHh
Confidence            99999865321   11222345889999999999987665

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.9e-39  Score=315.89  Aligned_cols=220  Identities=23%  Similarity=0.328  Sum_probs=178.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++..   +++   .                        .+
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~---~------------------------~~   53 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL---G------------------------DR   53 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT---C------------------------TT
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc---C------------------------Cc
Confidence            46788999999999999999999999999999999999754332   211   1                        46


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCc----ccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL----EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      +.++.+|++ |.++++++++.+.+ +|++|+||||||+.....+    .+.+.++|+.+                     
T Consensus        54 ~~~~~~D~~-~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~---------------------  110 (257)
T 3tl3_A           54 ARFAAADVT-DEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKI---------------------  110 (257)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHH---------------------
T ss_pred             eEEEECCCC-CHHHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHH---------------------
Confidence            889999999 99999999998877 9999999999998754332    34788889887                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHh--------CCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQ--------RGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~--------~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                      +++|+.|+++++++++|.|.+        ++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+
T Consensus       111 ~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~  190 (257)
T 3tl3_A          111 VDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMT  190 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            999999999999999999988        567899999999999998889999999999999999999999999999999


Q ss_pred             EeCCCCCCCCCcccccCCcccccccccc-CCCCChHHhhhccceee
Q psy3252         321 CLPPDTDTPGFENEEKSKPRETSLISQT-GGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       321 V~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~~~~~~~  365 (475)
                      |+||+|+|+++...............+. +|++.|||+|++.+.+.
T Consensus       191 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~  236 (257)
T 3tl3_A          191 IAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHII  236 (257)
T ss_dssp             EEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHH
T ss_pred             EEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh
Confidence            9999999998876433222222223466 89999999999866544

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.9e-39  Score=310.58  Aligned_cols=225  Identities=24%  Similarity=0.246  Sum_probs=190.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ||++|||||++|||+++|++|+++|  ++|++++|+.++++++.+++.                           .++.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~---------------------------~~~~~   54 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG---------------------------DRFFY   54 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG---------------------------GGEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC---------------------------CceEE
Confidence            7899999999999999999999995  689999999988887776552                           56889


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +.+|++ |.++++++++++.+++|++|+||||||+... .++.+.+.++|+++                     +++|+.
T Consensus        55 ~~~Dv~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~---------------------~~~N~~  112 (254)
T 3kzv_A           55 VVGDIT-EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKL---------------------YDINFF  112 (254)
T ss_dssp             EESCTT-SHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHH---------------------HHHHTH
T ss_pred             EECCCC-CHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHH---------------------HHHhhH
Confidence            999999 9999999999999999999999999998644 78889999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|++++ |+||++||.++..+.++...|++||+|+++|+++|+.|+  .||+||+|+||+|+|++....
T Consensus       113 g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~  189 (254)
T 3kzv_A          113 SIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNI  189 (254)
T ss_dssp             HHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCC
T ss_pred             HHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHh
Confidence            99999999999998865 999999999999999999999999999999999999998  689999999999999988754


Q ss_pred             ccCC------cc---ccccccccCCCCChHHhhhccceeeecCCCC-CCCCC
Q psy3252         335 EKSK------PR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPD-TDTPG  376 (475)
Q Consensus       335 ~~~~------~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~-~~~~g  376 (475)
                      ....      +.   ......+++|++.|||+|++.+  |++++.. .+++|
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~--~L~s~~~~~~itG  239 (254)
T 3kzv_A          190 RENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYA--KLALHGIPDGVNG  239 (254)
T ss_dssp             CCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHH--HHHHHCCCGGGTT
T ss_pred             hcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHH--HHHhhcccCCCCc
Confidence            3221      11   1122357899999999998754  4555553 55555

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-38  Score=313.52  Aligned_cols=236  Identities=23%  Similarity=0.255  Sum_probs=198.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+..                     ..++.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------------------~~~~~   61 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS---------------------EKQVN   61 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC---------------------GGGEE
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCC---------------------CcceE
Confidence            478999999999999999999999999999999999999988888877653310                     02688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC----cccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT----LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....+    +.+.+.++++.+                     ++
T Consensus        62 ~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~---------------------~~  119 (280)
T 1xkq_A           62 SVVADVT-TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT---------------------LK  119 (280)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHH---------------------HH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHH---------------------HH
Confidence            9999999 999999999999999999999999999876666    778899999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC-CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI-YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|+++++++++|.|.+++ |+||++||.++..+. ++...|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus       120 ~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  198 (280)
T 1xkq_A          120 LNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  198 (280)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             HhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCC
Confidence            999999999999999998766 999999999998887 889999999999999999999999999999999999999999


Q ss_pred             CCcccccCC-------c--cccccccccCCCCChHHhhhccceeeecCCC-CCCCCC
Q psy3252         330 GFENEEKSK-------P--RETSLISQTGGLYRPEVVKQSGLTITLCLPP-DTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~-------~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~-~~~~~g  376 (475)
                      +........       .  .......|++|++.|||+|++.+.  ++++. ..+++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~--l~s~~~~~~~tG  253 (280)
T 1xkq_A          199 FTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF--LADRNLSFYILG  253 (280)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH--HHCHHHHTTCCS
T ss_pred             cccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHH--hcCcccccCccC
Confidence            765431000       0  001112477899999999998654  44443 344444

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-38  Score=311.45  Aligned_cols=236  Identities=26%  Similarity=0.282  Sum_probs=198.9

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      |..++++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                          
T Consensus         4 m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------------   57 (263)
T 3ak4_A            4 MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE--------------------------   57 (263)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT--------------------------
T ss_pred             cccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--------------------------
Confidence            345677899999999999999999999999999999999999887766554331                          


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       .++.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++..                     +
T Consensus        58 -~~~~~~~~D~~-d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~  114 (263)
T 3ak4_A           58 -NGGFAVEVDVT-KRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFN---------------------F  114 (263)
T ss_dssp             -TCCEEEECCTT-CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------H
T ss_pred             -cCCeEEEEeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------H
Confidence             24567899999 999999999999999999999999999987778888999999988                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++|+.|+++++++++|.|.+++ .|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|
T Consensus       115 ~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  194 (263)
T 3ak4_A          115 DVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKT  194 (263)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTT
T ss_pred             HHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccC
Confidence            9999999999999999999877 799999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccc----C-----Cc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEK----S-----KP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~----~-----~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++......    .     ..  .......|++|+..|||+|++.+.  ++.+...+++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~--l~s~~~~~~tG  251 (263)
T 3ak4_A          195 AMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVF--LASDAARFMTG  251 (263)
T ss_dssp             HHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             hhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCccccCCCC
Confidence            97543210    0     00  011122477899999999998654  44555555554

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.7e-38  Score=309.44  Aligned_cols=236  Identities=22%  Similarity=0.249  Sum_probs=202.2

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEE-EecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .+.++.+|++|||||++|||+++|++|+++|++|++ ..|+.+.+++..+++.+.+                        
T Consensus        20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~------------------------   75 (267)
T 4iiu_A           20 FQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG------------------------   75 (267)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------
T ss_pred             hccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC------------------------
Confidence            344678999999999999999999999999999966 5688888888888887654                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++.++++++|+||||||+....++.+.+.++++..                     ++
T Consensus        76 ~~~~~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~---------------------~~  133 (267)
T 4iiu_A           76 GNGRLLSFDVA-NREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAV---------------------IH  133 (267)
T ss_dssp             CCEEEEECCTT-CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HH
T ss_pred             CceEEEEecCC-CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHH---------------------HH
Confidence            56889999999 999999999999999999999999999988888889999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHH-hCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMK-QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~-~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|++++++.+++.|. +++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       134 ~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  213 (267)
T 4iiu_A          134 TNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTG  213 (267)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCST
T ss_pred             HhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCC
Confidence            999999999999999887 5667999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +...... .........+.+|++.|||++++.+  +++++...+++|
T Consensus       214 ~~~~~~~-~~~~~~~~~p~~~~~~~edva~~~~--~L~s~~~~~itG  257 (267)
T 4iiu_A          214 MIEMEES-ALKEAMSMIPMKRMGQAEEVAGLAS--YLMSDIAGYVTR  257 (267)
T ss_dssp             TCCCCHH-HHHHHHHTCTTCSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             cccccHH-HHHHHHhcCCCCCCcCHHHHHHHHH--HHhCCcccCccC
Confidence            8765421 1111222457889999999998865  455666666665

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-38  Score=310.00  Aligned_cols=234  Identities=21%  Similarity=0.252  Sum_probs=190.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHH-HHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL-LQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+.. +.+.+.+...+                        .++
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~   59 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVE------------------------ERL   59 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGG------------------------GGE
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC------------------------Cce
Confidence            45689999999999999999999999999999997765443 33333332211                        568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc--cccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG--MALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .++.+|++ |.++++++++++.++++++|+||||||  .....++.+.+.++++.+                     +++
T Consensus        60 ~~~~~Dl~-~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~---------------------~~~  117 (264)
T 3i4f_A           60 QFVQADVT-KKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEM---------------------IQG  117 (264)
T ss_dssp             EEEECCTT-SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHH---------------------HHh
Confidence            99999999 999999999999999999999999999  445577888999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccc-cc-cccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQ-AA-NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~-a~-~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      |+.|+++++++++|.|++++.|+||++||. .+ ..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       118 N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  197 (264)
T 3i4f_A          118 NLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGE  197 (264)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGG
T ss_pred             ccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCc
Confidence            999999999999999999888999999998 44 5667788999999999999999999999999999999999999999


Q ss_pred             CCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +................+++|++.|||+|++.+  +++.+....++|
T Consensus       198 ~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~--~l~s~~~~~itG  242 (264)
T 3i4f_A          198 MKEATIQEARQLKEHNTPIGRSGTGEDIARTIS--FLCEDDSDMITG  242 (264)
T ss_dssp             GGSCCHHHHHHC--------CCCCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             cchhccHHHHHHHhhcCCCCCCcCHHHHHHHHH--HHcCcccCCCCC
Confidence            877654333223333468899999999999865  455555555555

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-38  Score=319.39  Aligned_cols=235  Identities=17%  Similarity=0.121  Sum_probs=197.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      |.++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++....+                       .
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-----------------------~   97 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-----------------------N   97 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-----------------------T
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-----------------------C
Confidence            3348899999999999999999999999999999999 999999888888763322                       4


Q ss_pred             eEEEEEeecCCCHH-----------------HHHHHHHHHHHhcCCccEEEEccccccCCCcccCC--------------
Q psy3252         172 FIEYVSLDISKDYE-----------------NIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT--------------  220 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~-----------------~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~--------------  220 (475)
                      ++.++.+|++ |.+                 +++++++++.+++|++|+||||||+....++.+.+              
T Consensus        98 ~~~~~~~Dl~-d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~  176 (328)
T 2qhx_A           98 SAITVQADLS-NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM  176 (328)
T ss_dssp             CEEEEECCCS-SSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHH
T ss_pred             eEEEEEeeCC-CchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence            6888999999 888                 99999999999999999999999998777777777              


Q ss_pred             HHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCC------CCeEEEeccccccccCCCChhhH
Q psy3252         221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG------RGCIVITASQAANLGIYGLAAYT  294 (475)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~------~g~IV~iSS~a~~~~~~~~~~Y~  294 (475)
                      .++|+.+                     +++|+.|+++++++++|.|.+++      .|+||++||..+..+.++...|+
T Consensus       177 ~~~~~~~---------------------~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  235 (328)
T 2qhx_A          177 ETATADL---------------------FGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYT  235 (328)
T ss_dssp             HHHHHHH---------------------HHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHH
T ss_pred             HHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHH
Confidence            7777766                     99999999999999999999877      79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCCccccccccccC-CCCChHHhhhccceeeecCCCCCC
Q psy3252         295 SSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTG-GLYRPEVVKQSGLTITLCLPPDTD  373 (475)
Q Consensus       295 aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~pe~va~~~~~~~~~~~~~~~  373 (475)
                      +||+|+++|+++|+.|++++||+||+|+||+|+|++ .... ..........|++ |++.|||+|++.+.  ++++...+
T Consensus       236 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~-~~~~~~~~~~p~~~r~~~pedvA~~v~~--l~s~~~~~  311 (328)
T 2qhx_A          236 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPP-AVWEGHRSKVPLYQRDSSAAEVSDVVIF--LCSSKAKY  311 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCH-HHHHHHHTTCTTTTSCBCHHHHHHHHHH--HHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccH-HHHHHHHhhCCCCCCCCCHHHHHHHHHH--HhCccccC
Confidence            999999999999999999999999999999999998 3321 1001111234777 99999999998654  45555566


Q ss_pred             CCC
Q psy3252         374 TPG  376 (475)
Q Consensus       374 ~~g  376 (475)
                      ++|
T Consensus       312 itG  314 (328)
T 2qhx_A          312 ITG  314 (328)
T ss_dssp             CCS
T ss_pred             ccC
Confidence            655

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.2e-38  Score=321.10  Aligned_cols=229  Identities=21%  Similarity=0.271  Sum_probs=200.2

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-------HHHHHHHHHHhCCCCcchhhhhHHHhhh
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-------LLQAQEEIKKACPNPKFIRFIEYEEIKK  162 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (475)
                      ++.+.+++||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++.+.+                
T Consensus        37 ~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g----------------  100 (346)
T 3kvo_A           37 LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG----------------  100 (346)
T ss_dssp             CCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT----------------
T ss_pred             CccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC----------------
Confidence            456678999999999999999999999999999999999999764       556666666543                


Q ss_pred             cCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhc
Q psy3252         163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLAL  242 (475)
Q Consensus       163 ~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
                              .++.++.+|++ |.++++++++++.+++|+||+||||||+....++.+.+.++|+.+               
T Consensus       101 --------~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~---------------  156 (346)
T 3kvo_A          101 --------GKALPCIVDVR-DEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLM---------------  156 (346)
T ss_dssp             --------CEEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHH---------------
T ss_pred             --------CeEEEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------
Confidence                    57889999999 999999999999999999999999999988888899999999988               


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc--CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         243 WRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG--IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       243 ~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~--~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                            +++|+.|+++++++++|.|++++.|+||++||..+..+  .++...|++||+|+++|+++|+.|++ .||+||+
T Consensus       157 ------~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~  229 (346)
T 3kvo_A          157 ------MNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNA  229 (346)
T ss_dssp             ------HHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEE
T ss_pred             ------HHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence                  99999999999999999999988899999999999877  78899999999999999999999999 9999999


Q ss_pred             EeCCC-CCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         321 CLPPD-TDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       321 V~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+||+ +.|++.+....        ..+++|+.+|||+|++.+.  ++++ ...++|
T Consensus       230 v~PG~~i~T~~~~~~~~--------~~~~~r~~~pedvA~~v~~--L~s~-~~~itG  275 (346)
T 3kvo_A          230 LWPKTAIHTAAMDMLGG--------PGIESQCRKVDIIADAAYS--IFQK-PKSFTG  275 (346)
T ss_dssp             EECSBCBCCHHHHHHCC----------CGGGCBCTHHHHHHHHH--HHTS-CTTCCS
T ss_pred             EeCCCccccHHHHhhcc--------ccccccCCCHHHHHHHHHH--HHhc-CCCCCc
Confidence            99995 99986543221        1246789999999998655  4444 455555

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.2e-38  Score=309.80  Aligned_cols=231  Identities=26%  Similarity=0.330  Sum_probs=196.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+  ++..+++.+.+                        .++.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~------------------------~~~~~   55 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHG------------------------VKAVH   55 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTS------------------------CCEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcC------------------------CceEE
Confidence            67899999999999999999999999999999999876  44555554322                        45788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.|
T Consensus        56 ~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~~  113 (255)
T 2q2v_A           56 HPADLS-DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKI---------------------IALNLSA  113 (255)
T ss_dssp             ECCCTT-SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHTHH
T ss_pred             EeCCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhHH
Confidence            999999 999999999999999999999999999987778888999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      +++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.....
T Consensus       114 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  193 (255)
T 2q2v_A          114 VFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQI  193 (255)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhc
Confidence            99999999999998888999999999999999999999999999999999999999999999999999999999765321


Q ss_pred             c---CC---c----ccc-ccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         336 K---SK---P----RET-SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       336 ~---~~---~----~~~-~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .   ..   .    ... ....+.+|++.|||+|++.+.  ++.+...+++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~--l~s~~~~~~tG  243 (255)
T 2q2v_A          194 DDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLF--LCSEAGSQVRG  243 (255)
T ss_dssp             HHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHH--HTSGGGTTCCS
T ss_pred             ccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHH--HhCCccCCCCC
Confidence            0   00   0    001 123477899999999998654  44444455544

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=5.7e-38  Score=306.40  Aligned_cols=226  Identities=25%  Similarity=0.347  Sum_probs=196.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           ..+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~~   56 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---------------------------DAAR   56 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---------------------------GGEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---------------------------cCce
Confidence            4679999999999999999999999999999999999988776665442                           2367


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        57 ~~~~D~~-~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~  114 (260)
T 1nff_A           57 YVHLDVT-QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRI---------------------LDVNLT  114 (260)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHH---------------------HHHHTH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHhhH
Confidence            8999999 999999999999999999999999999987778888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|++++.|+||++||.++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.. .
T Consensus       115 g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~  193 (260)
T 1nff_A          115 GVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W  193 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c
Confidence            999999999999998878999999999999999999999999999999999999999999999999999999999754 1


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..  . ... ..+++++..|||+|++.+.  ++.+...+++|
T Consensus       194 ~~--~-~~~-~~~~~~~~~~~dvA~~v~~--l~s~~~~~~~G  229 (260)
T 1nff_A          194 VP--E-DIF-QTALGRAAEPVEVSNLVVY--LASDESSYSTG  229 (260)
T ss_dssp             SC--T-TCS-CCSSSSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             ch--h-hHH-hCccCCCCCHHHHHHHHHH--HhCccccCCcC
Confidence            11  1 111 3477899999999998655  44444444444

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-38  Score=309.23  Aligned_cols=230  Identities=24%  Similarity=0.305  Sum_probs=198.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        .++.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~~~   55 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G------------------------ERSM   55 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C------------------------TTEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C------------------------CceE
Confidence            467999999999999999999999999999999999998888776665   1                        4577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        56 ~~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~  113 (253)
T 1hxh_A           56 FVRHDVS-SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRL---------------------LKINTE  113 (253)
T ss_dssp             EECCCTT-CHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHhhcH
Confidence            8999999 999999999999999999999999999987778888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccC--CcEEEEEeCCCCCCCCCc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQS--GLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~--gIrVn~V~PG~v~T~~~~  332 (475)
                      |++++++.++|.|++++ |+||++||.++..+.++...|++||+++++|+++++.|++++  ||+||+|+||+|+|++..
T Consensus       114 ~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~  192 (253)
T 1hxh_A          114 SVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ  192 (253)
T ss_dssp             HHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH
T ss_pred             HHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhh
Confidence            99999999999999877 999999999999999999999999999999999999999998  999999999999999765


Q ss_pred             ccccCCc-cc-ccc---ccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKP-RE-TSL---ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~-~~-~~~---~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ....... .. ...   ..+++|++.|||+|++.+.  ++++...+++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~--l~s~~~~~~tG  239 (253)
T 1hxh_A          193 ASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF--LASDESSVMSG  239 (253)
T ss_dssp             HHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             hccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHH--HcCccccCCCC
Confidence            4211111 11 111   3477899999999998654  45555555555

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-39  Score=314.29  Aligned_cols=228  Identities=26%  Similarity=0.346  Sum_probs=191.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .++.
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~~   55 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---------------------------AEAI   55 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC---------------------------SSEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------------------------CceE
Confidence            4779999999999999999999999999999999999888776654331                           3577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++|+.+                     +++|+.
T Consensus        56 ~~~~D~~-~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---------------------~~~N~~  113 (263)
T 2a4k_A           56 AVVADVS-DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKV---------------------LRVNLT  113 (263)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHH---------------------HHHHHH
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhH
Confidence            8999999 999999999999999999999999999987778888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.| ++ .|+||++||.++. +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus       114 g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  190 (263)
T 2a4k_A          114 GSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL  190 (263)
T ss_dssp             HHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS
T ss_pred             HHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc
Confidence            9999999999999 54 7999999999998 7778889999999999999999999999999999999999999986643


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ............|++|++.|||+|++.+.  ++++...+++|
T Consensus       191 ~~~~~~~~~~~~p~~~~~~p~dvA~~v~~--l~s~~~~~~tG  230 (263)
T 2a4k_A          191 PPWAWEQEVGASPLGRAGRPEEVAQAALF--LLSEESAYITG  230 (263)
T ss_dssp             CHHHHHHHHHTSTTCSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCccccCCcC
Confidence            21110111123477899999999998654  45555555555

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.9e-38  Score=310.33  Aligned_cols=232  Identities=18%  Similarity=0.176  Sum_probs=190.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++||++|||||++|||+++|++|+++|++|++++| +.++++++.+++.+..+                       .++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----------------------~~~   64 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-----------------------GSA   64 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-----------------------TCE
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-----------------------Cce
Confidence            467899999999999999999999999999999999 99888888888866421                       457


Q ss_pred             EEEEeecCCCH----HHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCH-----------HHHHHhhhhhhhccccc
Q psy3252         174 EYVSLDISKDY----ENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM-----------QDIKVMEQPLWLRGYHT  238 (475)
Q Consensus       174 ~~~~~Dvt~d~----~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~  238 (475)
                      .++.+|++ |.    ++++++++++.+++|++|+||||||+....++.+.+.           ++++.+           
T Consensus        65 ~~~~~Dl~-~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  132 (276)
T 1mxh_A           65 VLCKGDLS-LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL-----------  132 (276)
T ss_dssp             EEEECCCS-SSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHH-----------
T ss_pred             EEEeccCC-CccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHH-----------
Confidence            88999999 98    9999999999999999999999999987777777777           888877           


Q ss_pred             hhhccccchhhhhhHHHHHHHHHHHHHHHHhCCC------CeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         239 RLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR------GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       239 ~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~------g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                                +++|+.|+++++++++|.|. ++.      |+||++||.++..+.++...|++||+|+++|+++|+.|++
T Consensus       133 ----------~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~  201 (276)
T 1mxh_A          133 ----------FGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA  201 (276)
T ss_dssp             ----------HHHHTHHHHHHHHHHHHTC--------CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----------HHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHh
Confidence                      99999999999999999998 555      8999999999999999999999999999999999999999


Q ss_pred             cCCcEEEEEeCCCCCCCCCcccccCCccccccccccCC-CCChHHhhhccceeeecCCCCCCCCC
Q psy3252         313 QSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGG-LYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       313 ~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++||+||+|+||+|+|+  ...............+++| +..|||++++.+.  ++.+...+++|
T Consensus       202 ~~gi~v~~v~PG~v~t~--~~~~~~~~~~~~~~~p~~r~~~~~~dva~~v~~--l~s~~~~~~tG  262 (276)
T 1mxh_A          202 PRHIRVNAVAPGLSLLP--PAMPQETQEEYRRKVPLGQSEASAAQIADAIAF--LVSKDAGYITG  262 (276)
T ss_dssp             GGTEEEEEEEESSBSCC--SSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             hcCeEEEEEecCcccCC--ccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHH--HhCccccCccC
Confidence            99999999999999999  2211100011111246788 9999999998654  45555555555

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-38  Score=307.92  Aligned_cols=243  Identities=26%  Similarity=0.308  Sum_probs=209.9

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+                        .
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~   80 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG------------------------A   80 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------C
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC------------------------C
Confidence            4567899999999999999999999999999999999999998888888876643                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++
T Consensus        81 ~~~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~  138 (272)
T 1yb1_A           81 KVHTFVVDCS-NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKT---------------------FEV  138 (272)
T ss_dssp             CEEEEECCTT-CHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHH---------------------HHH
T ss_pred             eEEEEEeeCC-CHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHH---------------------HHH
Confidence            6889999999 999999999999999999999999999987777778888888877                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc---cCCcEEEEEeCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK---QSGLTITLCLPPDTDT  328 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~---~~gIrVn~V~PG~v~T  328 (475)
                      |+.|++++++.++|.|.+++.|+||++||..+..+.++...|++||+++++|+++++.|++   +.||+||+|+||+|+|
T Consensus       139 N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t  218 (272)
T 1yb1_A          139 NVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT  218 (272)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccC
Confidence            9999999999999999988889999999999988888888999999999999999999997   6799999999999999


Q ss_pred             CCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHH
Q psy3252         329 PGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLL  408 (475)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~  408 (475)
                      ++....      .    .                                              .....++|+++|+.++
T Consensus       219 ~~~~~~------~----~----------------------------------------------~~~~~~~~~dva~~i~  242 (272)
T 1yb1_A          219 GFIKNP------S----T----------------------------------------------SLGPTLEPEEVVNRLM  242 (272)
T ss_dssp             CSTTCT------H----H----------------------------------------------HHCCCCCHHHHHHHHH
T ss_pred             Cccccc------c----c----------------------------------------------cccCCCCHHHHHHHHH
Confidence            963210      0    0                                              0112578999999999


Q ss_pred             HHHhcCCeeEEeCchhHHHHHHhcCCcch
Q psy3252         409 EDALKGNYFSTVGLESYLITTLCAGFSPI  437 (475)
Q Consensus       409 ~ai~~g~~~~~~~~~~~~~~~~~~~~~P~  437 (475)
                      ..+.+++..++++...+++.. +.+++|.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~-~~~~~P~  270 (272)
T 1yb1_A          243 HGILTEQKMIFIPSSIAFLTT-LERILPE  270 (272)
T ss_dssp             HHHHTTCSEEEECCCCCHHHH-HHTTC--
T ss_pred             HHHHcCCCEEECCchHHHHHH-HHHhCCC
Confidence            999999988887776665544 4578884

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.2e-38  Score=318.88  Aligned_cols=270  Identities=19%  Similarity=0.185  Sum_probs=216.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC----------hhHHHHHHHHHHHhCCCCcchhhhhHHHhhh
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD----------EKKLLQAQEEIKKACPNPKFIRFIEYEEIKK  162 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~----------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (475)
                      +..++||++|||||++|||+++|++|+++|++|++++|+          .+.++++.+++...+                
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   85 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG----------------   85 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT----------------
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC----------------
Confidence            456889999999999999999999999999999999998          778888888887654                


Q ss_pred             cCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhc
Q psy3252         163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLAL  242 (475)
Q Consensus       163 ~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
                              .++.++.+|++ |.++++++++++.+++|+||+||||||+....++.+.+.++|+.+               
T Consensus        86 --------~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------  141 (322)
T 3qlj_A           86 --------GEAVADGSNVA-DWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAV---------------  141 (322)
T ss_dssp             --------CEEEEECCCTT-SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHH---------------
T ss_pred             --------CcEEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------
Confidence                    56889999999 999999999999999999999999999988888899999999988               


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHhCC------CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCc
Q psy3252         243 WRSWTVIDLNLYGTIHMTKALVEGMKQRG------RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL  316 (475)
Q Consensus       243 ~~~~~v~~vN~~g~~~l~~~~lp~m~~~~------~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gI  316 (475)
                            +++|+.|+++++++++|.|.+.+      .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||
T Consensus       142 ------~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI  215 (322)
T 3qlj_A          142 ------IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGV  215 (322)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             ------HHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCc
Confidence                  99999999999999999998542      379999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccC------CCccccc
Q psy3252         317 TITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKS------KPRETSL  390 (475)
Q Consensus       317 rVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~  390 (475)
                      +||+|+|| +.|++..........   ......+...|||++++.  +|++++...+++|-.-.-.-      .++....
T Consensus       216 ~vn~v~PG-~~t~~~~~~~~~~~~---~~~~~~~~~~pedva~~v--~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~  289 (322)
T 3qlj_A          216 TVNAIAPS-ARTRMTETVFAEMMA---TQDQDFDAMAPENVSPLV--VWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGP  289 (322)
T ss_dssp             EEEEEEEC-TTSCCSCCSCCC-----------CCTTCGGGTHHHH--HHHTSGGGGGCCSCEEEEETTEEEEEECCEEEE
T ss_pred             EEEEecCC-CCCccchhhhhhhhh---ccccccCCCCHHHHHHHH--HHHhCccccCCCCCEEEECCCccccCCCccccc
Confidence            99999999 999987654322111   111223567999999875  46677777776663210000      0000000


Q ss_pred             ccCCCCCCChHHHHHHHHHHHhcC
Q psy3252         391 ISQTGGLYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       391 ~~~~~~~~~~e~vA~~i~~ai~~g  414 (475)
                      .-......+++++++.+.+.+.+.
T Consensus       290 ~~~~~~~~~~~el~~~~~~~~~~~  313 (322)
T 3qlj_A          290 QIDKGARWDPAELGPVVADLLGKA  313 (322)
T ss_dssp             EEECSSCCCGGGHHHHHHHHHHHS
T ss_pred             ccCccCCCCHHHHHHHHHHHhhcc
Confidence            000122457889998887776643

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-38  Score=306.15  Aligned_cols=233  Identities=21%  Similarity=0.175  Sum_probs=189.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~~~   57 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG------------------------GQCV   57 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS------------------------SEEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC------------------------CceE
Confidence            3678999999999999999999999999999999999999988888876653                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHh-cCCccEEEEccc--cc-----cCCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDR-CGPVYMLVNCAG--MA-----LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~-~g~IDvLVnnAG--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                      ++.+|++ |.++++++++++.++ +|++|+||||||  +.     ...++.+.+.++|+.+                   
T Consensus        58 ~~~~Dv~-~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~-------------------  117 (260)
T 2qq5_A           58 PVVCDSS-QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDI-------------------  117 (260)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHH-------------------
T ss_pred             EEECCCC-CHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHH-------------------
Confidence            9999999 999999999999886 899999999995  32     2356778888888887                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                        +++|+.+++++++.++|.|.+++.|+||++||.++..+. +...|++||+|+++|+++|+.|++++||+||+|+||+|
T Consensus       118 --~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v  194 (260)
T 2qq5_A          118 --NNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIV  194 (260)
T ss_dssp             --HTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCS
T ss_pred             --HhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCcc
Confidence              999999999999999999998888999999999987654 46899999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCcc-----ccccccccCCCCChHHhhhccceeeecCCCC-CCCCC
Q psy3252         327 DTPGFENEEKSKPR-----ETSLISQTGGLYRPEVVKQSGLTITLCLPPD-TDTPG  376 (475)
Q Consensus       327 ~T~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~-~~~~g  376 (475)
                      +|++..........     ......++++.++|||+|++.+  |++++.. .+++|
T Consensus       195 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~--~l~s~~~~~~itG  248 (260)
T 2qq5_A          195 QTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVV--ALATDPNILSLSG  248 (260)
T ss_dssp             CTTTC----------------------CHHHHHHHHHHHHH--HHHTCTTGGGGTT
T ss_pred             ccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHH--HHhcCcccccccc
Confidence            99987643211110     0001235667789999998865  5566654 24554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-38  Score=310.39  Aligned_cols=230  Identities=22%  Similarity=0.314  Sum_probs=195.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++                            ..
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------------------~~   55 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----------------------------PG   55 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------------------------TT
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------------------cC
Confidence            34578999999999999999999999999999999999988777655432                            23


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+... .++.+.+.++|+.+                     +++
T Consensus        56 ~~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~  113 (270)
T 1yde_A           56 AVFILCDVT-QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQL---------------------LEL  113 (270)
T ss_dssp             EEEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             CeEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHH---------------------HHH
Confidence            678999999 9999999999999999999999999998753 67888899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|.++ .|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.
T Consensus       114 N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~  192 (270)
T 1yde_A          114 NLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW  192 (270)
T ss_dssp             HTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred             HhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchh
Confidence            9999999999999999765 599999999999999999999999999999999999999999999999999999999976


Q ss_pred             cccccCCcc--c----cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKPR--E----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~~--~----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......+.  .    .....|++|++.|||+|++.+  |++++ .++++|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~--~L~s~-~~~itG  240 (270)
T 1yde_A          193 EELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAV--FLASE-ANFCTG  240 (270)
T ss_dssp             HHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHH--HHHHH-CTTCCS
T ss_pred             hhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHH--HHccc-CCCcCC
Confidence            532211111  0    012357899999999998765  44544 456665

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-38  Score=309.10  Aligned_cols=225  Identities=21%  Similarity=0.257  Sum_probs=183.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++......                     ..++.
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------------------~~~~~   61 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVS---------------------EQNVN   61 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---------------------GGGEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccC---------------------CCcee
Confidence            467999999999999999999999999999999999999888887777432110                     14688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccC----CHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEM----TMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.    +.++++.+                     ++
T Consensus        62 ~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~---------------------~~  119 (278)
T 1spx_A           62 SVVADVT-TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDAT---------------------LN  119 (278)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHH---------------------HH
T ss_pred             EEecccC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHH---------------------HH
Confidence            9999999 9999999999999999999999999998776677777    88889887                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccc-cccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAA-NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~-~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|+++++++++|.|++++ |+||++||.++ ..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|+
T Consensus       120 ~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  198 (278)
T 1spx_A          120 LNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG  198 (278)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred             HHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCc
Confidence            999999999999999998766 99999999998 8888999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCcc---------ccccccccCCCCChHHhhhccce
Q psy3252         330 GFENEEKSKPR---------ETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       330 ~~~~~~~~~~~---------~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      +........+.         ......|+++++.|||+|++.+.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~  241 (278)
T 1spx_A          199 FGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF  241 (278)
T ss_dssp             C--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             cccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHH
Confidence            86543111110         11112467899999999998654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=4.1e-38  Score=310.54  Aligned_cols=236  Identities=14%  Similarity=0.109  Sum_probs=196.0

Q ss_pred             cccCCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCC
Q psy3252          90 MKRYLAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNP  167 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
                      ...|.+++||++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..                     
T Consensus        18 ~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~---------------------   74 (280)
T 3nrc_A           18 GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF---------------------   74 (280)
T ss_dssp             ----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG---------------------
T ss_pred             CCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc---------------------
Confidence            345667899999999998  7899999999999999999999987  334445554433                     


Q ss_pred             CccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCccc-CCHHHHHHhhhhhhhccccchhhc
Q psy3252         168 KFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEE-MTMQDIKVMEQPLWLRGYHTRLAL  242 (475)
Q Consensus       168 ~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
                         .++.++.+|++ |.++++++++++.+.+++||+||||||+...    .++.+ .+.++++.+               
T Consensus        75 ---~~~~~~~~Dl~-~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~---------------  135 (280)
T 3nrc_A           75 ---NPAAVLPCDVI-SDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIA---------------  135 (280)
T ss_dssp             ---CCSEEEECCTT-CHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHH---------------
T ss_pred             ---CCceEEEeecC-CHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHH---------------
Confidence               34678999999 9999999999999999999999999998754    44555 888888887               


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         243 WRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       243 ~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                            +++|+.++++++++++|.|.++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+
T Consensus       136 ------~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~  208 (280)
T 3nrc_A          136 ------HDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVS  208 (280)
T ss_dssp             ------HHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred             ------HHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEe
Confidence                  9999999999999999999876 699999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         323 PPDTDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       323 PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ||+|+|++.........  .......+.+|...|||+|++.+.  ++.+...+++|
T Consensus       209 PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~--l~s~~~~~~tG  262 (280)
T 3nrc_A          209 AGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAF--LCSDMATGITG  262 (280)
T ss_dssp             ECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHH--TTSGGGTTCCS
T ss_pred             eccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HhCcccCCcCC
Confidence            99999998765432111  112224578999999999998654  55555555555

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2e-37  Score=297.09  Aligned_cols=222  Identities=23%  Similarity=0.313  Sum_probs=192.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+                       .++.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~~~~   57 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-----------------------VEVFYH   57 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----------------------CCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----------------------CeEEEE
Confidence            378999999999999999999999999999999999999998888864322                       568899


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.|+
T Consensus        58 ~~D~~-~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~g~  115 (235)
T 3l77_A           58 HLDVS-KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEM---------------------IEVNLLGV  115 (235)
T ss_dssp             ECCTT-CHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHH---------------------HHHHTHHH
T ss_pred             EeccC-CHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHH---------------------HHHHHHHH
Confidence            99999 999999999999999999999999999988888999999999988                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      ++++++++|.|.+ +.|+||++||..+..+.++...|++||+|+++|+++|  ++...||+||+|+||+|+|++......
T Consensus       116 ~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~  192 (235)
T 3l77_A          116 WRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPG  192 (235)
T ss_dssp             HHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSC
T ss_pred             HHHHHHHHHHHhh-cCCcEEEEecchhcccCCCcchHHHHHHHHHHHHHHH--hhcCCCeEEEEEeCCccccccccccCC
Confidence            9999999999944 4689999999999999999999999999999999999  555789999999999999998765543


Q ss_pred             CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         337 SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       337 ~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..        ...+..+|||+|++.  ++++..+....++
T Consensus       193 ~~--------~~~~~~~p~dva~~v--~~l~~~~~~~~~~  222 (235)
T 3l77_A          193 KP--------KEKGYLKPDEIAEAV--RCLLKLPKDVRVE  222 (235)
T ss_dssp             CC--------GGGTCBCHHHHHHHH--HHHHTSCTTCCCC
T ss_pred             cc--------cccCCCCHHHHHHHH--HHHHcCCCCCccc
Confidence            21        123788999999985  4455555555443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.7e-38  Score=308.80  Aligned_cols=224  Identities=21%  Similarity=0.257  Sum_probs=182.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++ |++|||||++|||+++|++|+++|++|++++|+.++++++.+++...                         .++
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-------------------------~~~   71 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-------------------------TRV   71 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-------------------------SCE
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-------------------------CcE
Confidence            4455 89999999999999999999999999999999998888877766421                         357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+... .++.+.+.++++.+                     +++|
T Consensus        72 ~~~~~Dv~-d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~---------------------~~vN  129 (272)
T 2nwq_A           72 LPLTLDVR-DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTM---------------------VDTN  129 (272)
T ss_dssp             EEEECCTT-CHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHHH
T ss_pred             EEEEcCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            88999999 9999999999999999999999999998764 78888999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCC-eEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRG-CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g-~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.|+++++++++|.|++++.| +||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       130 ~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~  209 (272)
T 2nwq_A          130 IKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFS  209 (272)
T ss_dssp             THHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcch
Confidence            999999999999999987778 9999999999999999999999999999999999999999999999999999999986


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceee
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .....................+|||+|++.+.+.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~  243 (272)
T 2nwq_A          210 LVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIM  243 (272)
T ss_dssp             ----------------CCCCBCHHHHHHHHHHHH
T ss_pred             hcccccchHHHHHhhccCCCCCHHHHHHHHHHHh
Confidence            5321111100000111123579999999865543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=6e-38  Score=309.05  Aligned_cols=228  Identities=21%  Similarity=0.287  Sum_probs=194.1

Q ss_pred             cccccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCC
Q psy3252          88 LQMKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNP  167 (475)
Q Consensus        88 ~~~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
                      ..|..+++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                        
T Consensus        20 ~~m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~------------------------   75 (281)
T 3ppi_A           20 GSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG------------------------   75 (281)
T ss_dssp             ----CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------------------------
T ss_pred             chhhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------------------------
Confidence            34556678899999999999999999999999999999999999999888877661                        


Q ss_pred             CccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEc-cccccCCCc-----ccCCHHHHHHhhhhhhhccccchhh
Q psy3252         168 KFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNC-AGMALCGTL-----EEMTMQDIKVMEQPLWLRGYHTRLA  241 (475)
Q Consensus       168 ~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnn-AG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  241 (475)
                         .++.++.+|++ |.++++++++++ ++++++|+|||| ||+.....+     .+.+.++++.+              
T Consensus        76 ---~~~~~~~~Dl~-~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~--------------  136 (281)
T 3ppi_A           76 ---NRAEFVSTNVT-SEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKT--------------  136 (281)
T ss_dssp             ---TTEEEEECCTT-CHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHH--------------
T ss_pred             ---CceEEEEcCCC-CHHHHHHHHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHH--------------
Confidence               45889999999 999999999999 889999999999 666544443     36778888877              


Q ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHh------CCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         242 LWRSWTVIDLNLYGTIHMTKALVEGMKQ------RGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       242 ~~~~~~v~~vN~~g~~~l~~~~lp~m~~------~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                             +++|+.|++++++.+++.|.+      ++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++|
T Consensus       137 -------~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g  209 (281)
T 3ppi_A          137 -------IDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAG  209 (281)
T ss_dssp             -------HHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             -------HHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcC
Confidence                   999999999999999999987      5678999999999999999999999999999999999999999999


Q ss_pred             cEEEEEeCCCCCCCCCcccccCCcccccccccc-CCCCChHHhhhccceee
Q psy3252         316 LTITLCLPPDTDTPGFENEEKSKPRETSLISQT-GGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       316 IrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~~~~~~~  365 (475)
                      |+||+|+||+|+|++................+. +++..|||+|++.+.++
T Consensus       210 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~  260 (281)
T 3ppi_A          210 IRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLL  260 (281)
T ss_dssp             EEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHH
T ss_pred             eEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Confidence            999999999999998765433222222223455 88999999999877655

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=8.1e-38  Score=303.32  Aligned_cols=218  Identities=23%  Similarity=0.290  Sum_probs=179.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .++.++.+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~~~~~~   53 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---------------------------DNLYIAQL   53 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------------------------TTEEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------------------------CceEEEEc
Confidence            589999999999999999999999999999999988877766552                           34778999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      |++ |.++++++++++.+++|++|+||||||+.. ..++.+.+.++++.+                     +++|+.|++
T Consensus        54 Dv~-~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~---------------------~~~N~~g~~  111 (248)
T 3asu_A           54 DVR-NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM---------------------IDTNNKGLV  111 (248)
T ss_dssp             CTT-CHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHH---------------------HHHHTHHHH
T ss_pred             CCC-CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHH---------------------HHHHhHHHH
Confidence            999 999999999999999999999999999873 567888999999988                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC-CCCCccccc
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD-TPGFENEEK  336 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~-T~~~~~~~~  336 (475)
                      +++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+ |++......
T Consensus       112 ~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~  191 (248)
T 3asu_A          112 YMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFK  191 (248)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---------
T ss_pred             HHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhccc
Confidence            9999999999887789999999999999999999999999999999999999999999999999999999 998643211


Q ss_pred             CCccccccccccCCCCChHHhhhccceee
Q psy3252         337 SKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       337 ~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .................|||+|++.+.+.
T Consensus       192 ~~~~~~~~~~~~~~~~~p~dvA~~v~~l~  220 (248)
T 3asu_A          192 GDDGKAEKTYQNTVALTPEDVSEAVWWVS  220 (248)
T ss_dssp             -------------CCBCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHhccCCCCHHHHHHHHHHHh
Confidence            11100000011223579999999876543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=8.9e-38  Score=305.22  Aligned_cols=234  Identities=13%  Similarity=0.130  Sum_probs=196.5

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          94 LAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        94 ~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+....+.+.+ +.+..+.                      .
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~----------------------~   59 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHE-LAGTLDR----------------------N   59 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHTSSS----------------------C
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHH-HHHhcCC----------------------C
Confidence            56889999999999  679999999999999999999999755554443 3333221                      3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc----CCCcccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL----CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                      ++.++.+|++ |.++++++++++.+++|++|+||||||+..    ..++.+.+.++++.+                    
T Consensus        60 ~~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~--------------------  118 (266)
T 3oig_A           60 DSIILPCDVT-NDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLA--------------------  118 (266)
T ss_dssp             CCEEEECCCS-SSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHH--------------------
T ss_pred             CceEEeCCCC-CHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHH--------------------
Confidence            6789999999 999999999999999999999999999876    467788899999988                    


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                       +++|+.++++++++++|.|++  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+
T Consensus       119 -~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (266)
T 3oig_A          119 -HNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIR  195 (266)
T ss_dssp             -HHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             -HHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence             999999999999999999974  48999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         328 TPGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       328 T~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |++..........  ......+.+|...|||+|++.+.  ++.+....++|
T Consensus       196 T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~--l~s~~~~~~tG  244 (266)
T 3oig_A          196 TLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAF--LFSDMSRGITG  244 (266)
T ss_dssp             SGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             ccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HcCCchhcCcC
Confidence            9987654322111  11223578899999999998654  45555555555

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=9e-38  Score=302.96  Aligned_cols=225  Identities=23%  Similarity=0.271  Sum_probs=179.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.         +.                         ..+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~-------------------------~~~   48 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ-------------------------YPF   48 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC-------------------------CSS
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc-------------------------CCc
Confidence            46789999999999999999999999999999999998641         00                         115


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+
T Consensus        49 ~~~~~D~~-d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  106 (250)
T 2fwm_X           49 ATEVMDVA-DAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQT---------------------FAVNV  106 (250)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHH---------------------HHHHT
T ss_pred             eEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHcc
Confidence            67899999 999999999999999999999999999987778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++++.|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...
T Consensus       107 ~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  186 (250)
T 2fwm_X          107 GGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT  186 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccc
Confidence            99999999999999988889999999999999999999999999999999999999999999999999999999998654


Q ss_pred             cccCCc--c-cccc-------ccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKP--R-ETSL-------ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~--~-~~~~-------~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ......  . ....       ..|++|++.|||+|++.+.  ++++...+++|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~--l~s~~~~~~tG  237 (250)
T 2fwm_X          187 LWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILF--LASDLASHITL  237 (250)
T ss_dssp             -----------------------------CHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             cccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHH--HhCccccCCCC
Confidence            321111  0 1111       3477899999999998654  45555555555

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-38  Score=304.20  Aligned_cols=231  Identities=24%  Similarity=0.257  Sum_probs=179.3

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ....++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------   59 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---------------------------   59 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------------------------
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---------------------------
Confidence            34567889999999999999999999999999999999999998888776652                           


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ +.+++.++++    +++++|+||||||+....++.+.+.++++.+                     ++
T Consensus        60 ~~~~~~~~D~~-~~~~~~~~~~----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~  113 (249)
T 3f9i_A           60 DNYTIEVCNLA-NKEECSNLIS----KTSNLDILVCNAGITSDTLAIRMKDQDFDKV---------------------ID  113 (249)
T ss_dssp             SSEEEEECCTT-SHHHHHHHHH----TCSCCSEEEECCC-------------CHHHH---------------------HH
T ss_pred             cCccEEEcCCC-CHHHHHHHHH----hcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------HH
Confidence            35778899999 9888887765    4578999999999987777777888888877                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       114 ~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  193 (249)
T 3f9i_A          114 INLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM  193 (249)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC---
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCc
Confidence            99999999999999999988889999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ................+.+++..|||++++.+.  ++.+....++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~s~~~~~~tG  237 (249)
T 3f9i_A          194 TDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAF--LASNNASYITG  237 (249)
T ss_dssp             ---CCHHHHHHHHHHCTTCSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             ccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCCccCCccC
Confidence            776543322222334578999999999988654  55555555544

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=6.3e-38  Score=303.76  Aligned_cols=231  Identities=19%  Similarity=0.213  Sum_probs=200.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++||++|||||++|||+++|++|+++|++|+++ +|+.+.++++.+++...+                        .++.
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~   60 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG------------------------GSAF   60 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT------------------------CEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC------------------------CceE
Confidence            579999999999999999999999999999885 788888888888887654                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcC------CccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCG------PVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g------~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      ++.+|++ +.++++.+++++.+.++      ++|+||||||+....++.+.+.++++.+                     
T Consensus        61 ~~~~D~~-~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------  118 (255)
T 3icc_A           61 SIGANLE-SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRM---------------------  118 (255)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHH---------------------
T ss_pred             EEecCcC-CHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHH---------------------
Confidence            9999999 99999999999988764      4999999999988788889999999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|.+  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       119 ~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t  196 (255)
T 3icc_A          119 VSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKT  196 (255)
T ss_dssp             HHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCC
T ss_pred             HhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecc
Confidence            999999999999999999943  489999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCC--ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSK--PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~--~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++........  ........+++|++.|||++++.+  +++++...+++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~--~l~s~~~~~~tG  244 (255)
T 3icc_A          197 DMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAA--FLASPDSRWVTG  244 (255)
T ss_dssp             SSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             cchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHH--HHhCcccCCccC
Confidence            9887654332  122223457899999999999754  566666666665

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-38  Score=306.23  Aligned_cols=235  Identities=14%  Similarity=0.097  Sum_probs=192.0

Q ss_pred             ccCCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCC
Q psy3252          91 KRYLAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPK  168 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
                      +....+++|++|||||+  +|||+++|++|+++|++|++++|+.... +..+++.+..                      
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~----------------------   63 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEF----------------------   63 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHT----------------------
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHc----------------------
Confidence            34567889999999998  9999999999999999999999995443 3344444433                      


Q ss_pred             ccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCccc-CCHHHHHHhhhhhhhccccchhhcc
Q psy3252         169 FIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEE-MTMQDIKVMEQPLWLRGYHTRLALW  243 (475)
Q Consensus       169 ~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  243 (475)
                        ..+.++.+|++ |.++++++++++.+++|+||+||||||+...    .++.+ .+.++++.+                
T Consensus        64 --~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~----------------  124 (271)
T 3ek2_A           64 --GSELVFPCDVA-DDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIA----------------  124 (271)
T ss_dssp             --TCCCEEECCTT-CHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHH----------------
T ss_pred             --CCcEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHH----------------
Confidence              23668999999 9999999999999999999999999998764    55555 889999988                


Q ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         244 RSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       244 ~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                           +++|+.|+++++++++|.|.+  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+|
T Consensus       125 -----~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  197 (271)
T 3ek2_A          125 -----HDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISA  197 (271)
T ss_dssp             -----HHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             -----HhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEec
Confidence                 999999999999999999975  4899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         324 PDTDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       324 G~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+|+|++.........  .......+++|++.|||+|++.+  +++++...+++|
T Consensus       198 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~--~l~s~~~~~~tG  250 (271)
T 3ek2_A          198 GPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGA--FLLSDLASGVTA  250 (271)
T ss_dssp             CCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             CcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHH--HHcCcccCCeee
Confidence            9999998765432111  11222457899999999999865  455565566665

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=2.5e-38  Score=307.97  Aligned_cols=226  Identities=27%  Similarity=0.308  Sum_probs=182.3

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.++++                                   
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------------------------   59 (253)
T 2nm0_A           15 VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------------------------------   59 (253)
T ss_dssp             -----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------------------------------
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------------------------------
Confidence            446678999999999999999999999999999999999864321                                   


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .+.++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++
T Consensus        60 ~~~~~~~Dl~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~~  117 (253)
T 2nm0_A           60 GFLAVKCDIT-DTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSV---------------------VET  117 (253)
T ss_dssp             TSEEEECCTT-SHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHH---------------------HHH
T ss_pred             cceEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHH
Confidence            2457899999 999999999999999999999999999987777788888888877                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       118 N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  197 (253)
T 2nm0_A          118 NLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMT  197 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcch
Confidence            99999999999999999877899999999999888888899999999999999999999999999999999999999987


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...............+.+|+..|||+|++.+.  ++.+...+++|
T Consensus       198 ~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~--l~s~~~~~~tG  240 (253)
T 2nm0_A          198 KVLTDEQRANIVSQVPLGRYARPEEIAATVRF--LASDDASYITG  240 (253)
T ss_dssp             ------CHHHHHTTCTTCSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             hhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCccccCCcC
Confidence            64322111111123477899999999998654  44555555555

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=6.2e-38  Score=305.34  Aligned_cols=234  Identities=19%  Similarity=0.199  Sum_probs=197.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHH---cCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAK---RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~---~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +++++|++|||||++|||+++|++|++   +|++|++++|+.++++++.+++.+..+.                      
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----------------------   59 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD----------------------   59 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTT----------------------
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCC----------------------
Confidence            457899999999999999999999999   8999999999999999888888765321                      


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHH--hcCCcc--EEEEccccccC--CCccc-CCHHHHHHhhhhhhhccccchhhcc
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMD--RCGPVY--MLVNCAGMALC--GTLEE-MTMQDIKVMEQPLWLRGYHTRLALW  243 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~--~~g~ID--vLVnnAG~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  243 (475)
                      .++.++.+|++ |.++++++++++.+  .+|++|  +||||||+...  .++.+ .+.++++.+                
T Consensus        60 ~~~~~~~~Dv~-~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~----------------  122 (259)
T 1oaa_A           60 LKVVLAAADLG-TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY----------------  122 (259)
T ss_dssp             SEEEEEECCTT-SHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHH----------------
T ss_pred             CeEEEEecCCC-CHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHH----------------
Confidence            56889999999 99999999999998  778999  99999998643  46777 688999988                


Q ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhC--CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         244 RSWTVIDLNLYGTIHMTKALVEGMKQR--GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       244 ~~~~v~~vN~~g~~~l~~~~lp~m~~~--~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                           +++|+.|+++++++++|.|+++  +.|+||++||.++..+.++...|++||+|+++|+++|+.|+++  |+||+|
T Consensus       123 -----~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v  195 (259)
T 1oaa_A          123 -----WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSY  195 (259)
T ss_dssp             -----HHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEE
T ss_pred             -----HHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEe
Confidence                 9999999999999999999887  5699999999999999999999999999999999999999974  999999


Q ss_pred             eCCCCCCCCCcccccC--Ccc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         322 LPPDTDTPGFENEEKS--KPR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       322 ~PG~v~T~~~~~~~~~--~~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +||+|+|++.......  .+.   ......|++|++.|||+|++.+.+.  .+ ..+++|
T Consensus       196 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~--~~-~~~itG  252 (259)
T 1oaa_A          196 APGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL--QK-DTFQSG  252 (259)
T ss_dssp             ECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHH--HH-CCSCTT
T ss_pred             cCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHH--hh-ccccCC
Confidence            9999999986543210  111   1112346789999999999876544  32 345554

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.6e-37  Score=303.19  Aligned_cols=232  Identities=26%  Similarity=0.286  Sum_probs=191.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+.++++.+++.+.+                        .++.+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~   80 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG------------------------GEAVA   80 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------CEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC------------------------CcEEE
Confidence            47899999999999999999999999999876 788888888888877653                        57889


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +.+|++ |.++++++++++.++++++|+||||||+... .++.+.+.++++.+                     +++|+.
T Consensus        81 ~~~Dl~-~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~N~~  138 (272)
T 4e3z_A           81 IPGDVG-NAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERM---------------------LRVNVT  138 (272)
T ss_dssp             EECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHHHTH
T ss_pred             EEcCCC-CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHH---------------------HhhhhH
Confidence            999999 9999999999999999999999999998765 77888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhC---CCCeEEEeccccccccCC-CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         255 GTIHMTKALVEGMKQR---GRGCIVITASQAANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~---~~g~IV~iSS~a~~~~~~-~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      |+++++++++|.|.+.   +.|+||++||.++..+.+ +...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       139 g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  218 (272)
T 4e3z_A          139 GSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL  218 (272)
T ss_dssp             HHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             HHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence            9999999999999863   468999999999988776 678899999999999999999999999999999999999998


Q ss_pred             CcccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........ ........+.++.+.|||+|++.+.  ++.+....++|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~--l~s~~~~~~tG  263 (272)
T 4e3z_A          219 HASGGLPDRAREMAPSVPMQRAGMPEEVADAILY--LLSPSASYVTG  263 (272)
T ss_dssp             ---------------CCTTSSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             ccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHH--HhCCccccccC
Confidence            76522211 1122223577899999999998665  44555555554

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=3.7e-37  Score=303.18  Aligned_cols=190  Identities=32%  Similarity=0.460  Sum_probs=175.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++    +                       .++.
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-----------------------~~~~   54 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----P-----------------------DRAE   54 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----T-----------------------TTEE
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c-----------------------CCce
Confidence            457899999999999999999999999999999999998877665432    1                       4578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        55 ~~~~Dv~-~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~  112 (281)
T 3m1a_A           55 AISLDVT-DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDL---------------------FELHVF  112 (281)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEeeCC-CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------HHHHHH
Confidence            9999999 999999999999999999999999999988788889999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      |++++++.++|.|++++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+++..
T Consensus       113 g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          113 GPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccc
Confidence            9999999999999988889999999999999999999999999999999999999999999999999999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=6.3e-38  Score=303.67  Aligned_cols=224  Identities=22%  Similarity=0.278  Sum_probs=182.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++                                   +
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------------------------------~   55 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------------------------------L   55 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------------------------------S
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------------------------------h
Confidence            45789999999999999999999999999999999998643211                                   1


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ..+.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+
T Consensus        56 ~~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  113 (247)
T 1uzm_A           56 FGVEVDVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKV---------------------INANL  113 (247)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHH---------------------HHHHT
T ss_pred             cCeeccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHh
Confidence            13789999 999999999999999999999999999987777888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       114 ~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  193 (247)
T 1uzm_A          114 TGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA  193 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh
Confidence            99999999999999988889999999999999999999999999999999999999999999999999999999997553


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .............+.+++..|||+|++.+.  ++++...+++|
T Consensus       194 ~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~--l~s~~~~~~~G  234 (247)
T 1uzm_A          194 LDERIQQGALQFIPAKRVGTPAEVAGVVSF--LASEDASYISG  234 (247)
T ss_dssp             SCHHHHHHHGGGCTTCSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCccccCCcC
Confidence            211111111123467899999999998654  44555555555

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=7.7e-37  Score=302.03  Aligned_cols=240  Identities=24%  Similarity=0.255  Sum_probs=203.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.                       .++.
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~~   81 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-----------------------ASAH   81 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----------------------SEEE
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-----------------------CceE
Confidence            46799999999999999999999999999999999999999888887766542                       3688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEc-cccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNC-AGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnn-AG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++++++++++.+.+|++|+|||| ||+.. ..+.+.+.++++.+                     +++|+
T Consensus        82 ~~~~Dl~-d~~~v~~~~~~~~~~~g~iD~li~naag~~~-~~~~~~~~~~~~~~---------------------~~vN~  138 (286)
T 1xu9_A           82 YIAGTME-DMTFAEQFVAQAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKS---------------------MEVNF  138 (286)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHTSCSEEEECCCCCCC-CCCCCSCHHHHHHH---------------------HHHHT
T ss_pred             EEeCCCC-CHHHHHHHHHHHHHHcCCCCEEEECCccCCC-CccccCCHHHHHHH---------------------HHHHh
Confidence            9999999 9999999999999999999999999 57653 34556688888887                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHH--ccCCcEEEEEeCCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEV--KQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El--~~~gIrVn~V~PG~v~T~~~  331 (475)
                      .|+++++++++|.|.++ .|+||++||.++..+.++...|++||+++++|+++++.|+  ...||+|++|+||+|+|++.
T Consensus       139 ~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~  217 (286)
T 1xu9_A          139 LSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA  217 (286)
T ss_dssp             HHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH
T ss_pred             hHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH
Confidence            99999999999998764 4899999999999999999999999999999999999999  67899999999999999954


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHH
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDA  411 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai  411 (475)
                      .....                                       +.               .....++||+||+.++.++
T Consensus       218 ~~~~~---------------------------------------~~---------------~~~~~~~~~~vA~~i~~~~  243 (286)
T 1xu9_A          218 MKAVS---------------------------------------GI---------------VHMQAAPKEECALEIIKGG  243 (286)
T ss_dssp             HHHSC---------------------------------------GG---------------GGGGCBCHHHHHHHHHHHH
T ss_pred             HHhcc---------------------------------------cc---------------ccCCCCCHHHHHHHHHHHH
Confidence            32100                                       00               0012578999999999999


Q ss_pred             hcCCeeEEeCchhHHHHHHhcCCcc
Q psy3252         412 LKGNYFSTVGLESYLITTLCAGFSP  436 (475)
Q Consensus       412 ~~g~~~~~~~~~~~~~~~~~~~~~P  436 (475)
                      .+++..+++++..++ ..++..++|
T Consensus       244 ~~~~~~~~~~~~~~~-~~~~~~~~P  267 (286)
T 1xu9_A          244 ALRQEEVYYDSSLWT-TLLIRNPSR  267 (286)
T ss_dssp             HTTCSEEEECSCHHH-HHHSCCHHH
T ss_pred             hcCCceEEeccHHHH-HHHHHHHCh
Confidence            998888888765554 444556667

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.4e-37  Score=305.78  Aligned_cols=231  Identities=14%  Similarity=0.132  Sum_probs=193.8

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..                        ..
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~------------------------~~   57 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL------------------------NS   57 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT------------------------TC
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc------------------------CC
Confidence            4679999999999  99999999999999999999999976 555555555432                        12


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++++.+                     
T Consensus        58 ~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~---------------------  115 (275)
T 2pd4_A           58 PYVYELDVS-KEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTA---------------------  115 (275)
T ss_dssp             CCEEECCTT-CHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHH---------------------
T ss_pred             cEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHH---------------------
Confidence            567899999 9999999999999999999999999998754    57778899999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|.+  .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       116 ~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T  193 (275)
T 2pd4_A          116 MEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRT  193 (275)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             HHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccc
Confidence            999999999999999999975  489999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++..........  ......|++|++.|||+|++.+.  ++++...+++|
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~--l~s~~~~~~tG  241 (275)
T 2pd4_A          194 LASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY--LLSSLSSGVSG  241 (275)
T ss_dssp             TTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             chhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHH--HhCccccCCCC
Confidence            986543211110  11113477899999999998654  44555555555

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=7.4e-37  Score=298.30  Aligned_cols=237  Identities=24%  Similarity=0.242  Sum_probs=178.0

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~   63 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG------------------------F   63 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------C
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------C
Confidence            3467889999999999999999999999999999999999998888887776543                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhc-CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.++.+|++ +.++++++++++.+.+ +++|+||||||+....++.+.+.++++..                     ++
T Consensus        64 ~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~  121 (266)
T 1xq1_A           64 QVTGSVCDAS-LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFH---------------------IS  121 (266)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHH---------------------HH
T ss_pred             eeEEEECCCC-CHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHH---------------------HH
Confidence            5788999999 9999999999999999 89999999999987777888899999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++++++|.|.+++.++||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+|.|++
T Consensus       122 ~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  201 (266)
T 1xq1_A          122 TNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL  201 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred             HhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccch
Confidence            99999999999999999888789999999999998888999999999999999999999999999999999999999998


Q ss_pred             CcccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........ ........++++++.|||++++.+.  ++.+....++|
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~~~~~~~~~G  246 (266)
T 1xq1_A          202 AEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAF--LCMPAASYITG  246 (266)
T ss_dssp             ----------------------CCGGGGHHHHHH--HTSGGGTTCCS
T ss_pred             hhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCccccCccC
Confidence            76432111 1111123467889999999997654  44444444444

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=3.7e-37  Score=304.31  Aligned_cols=232  Identities=20%  Similarity=0.189  Sum_probs=193.1

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++||++|||||+  +|||+++|++|+++|++|++++|+.+ +++..+++.+..                        ..
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~------------------------~~   72 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF------------------------GS   72 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT------------------------TC
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc------------------------CC
Confidence            3789999999999  99999999999999999999999975 445555555432                        12


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++++.+                     
T Consensus        73 ~~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~---------------------  130 (285)
T 2p91_A           73 DLVVKCDVS-LDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIA---------------------  130 (285)
T ss_dssp             CCEEECCTT-CHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHH---------------------
T ss_pred             eEEEEcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHH---------------------
Confidence            567899999 9999999999999999999999999998754    56778899999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|.++ .|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|
T Consensus       131 ~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  209 (285)
T 2p91_A          131 MDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKT  209 (285)
T ss_dssp             HHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             HHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccC
Confidence            9999999999999999999764 599999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++..........  ......|++|++.|||+|++.+.  ++++....++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~--l~s~~~~~~tG  257 (285)
T 2p91_A          210 LAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVF--LCSDWARAITG  257 (285)
T ss_dssp             SCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH--HTSGGGTTCCS
T ss_pred             chhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCCcccCCCC
Confidence            986542211110  11123477899999999998654  44555555555

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=7.3e-37  Score=297.70  Aligned_cols=224  Identities=24%  Similarity=0.288  Sum_probs=189.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        .+
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~   59 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---G------------------------NN   59 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---C------------------------TT
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---C------------------------Cc
Confidence            35688999999999999999999999999999999999988887766655   1                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcc------cCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLE------EMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                      +.++.+|++ |.++++++++++.++++++|+||||||+....++.      +.+.++++..                   
T Consensus        60 ~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~-------------------  119 (265)
T 2o23_A           60 CVFAPADVT-SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV-------------------  119 (265)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHH-------------------
T ss_pred             eEEEEcCCC-CHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHH-------------------
Confidence            788999999 99999999999999999999999999987655444      3678888877                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhC------CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~------~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                        +++|+.++++++++++|.|.++      +.|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+
T Consensus       120 --~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  197 (265)
T 2o23_A          120 --LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMT  197 (265)
T ss_dssp             --HHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             --HHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence              9999999999999999999887      67899999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCCCCCcccccCCcccccccccc-CCCCChHHhhhccceee
Q psy3252         321 CLPPDTDTPGFENEEKSKPRETSLISQT-GGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       321 V~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~~~~~~~  365 (475)
                      |+||+|+|++................+. +++..|||+|++.+.+.
T Consensus       198 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  243 (265)
T 2o23_A          198 IAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII  243 (265)
T ss_dssp             EEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred             EEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHh
Confidence            9999999998765322211111223455 88999999999877654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-37  Score=302.67  Aligned_cols=237  Identities=23%  Similarity=0.237  Sum_probs=199.4

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~   93 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG------------------------Y   93 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT------------------------C
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC------------------------C
Confidence            3467889999999999999999999999999999999999988888887776532                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++
T Consensus        94 ~~~~~~~Dl~-d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~  151 (285)
T 2c07_A           94 ESSGYAGDVS-KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDV---------------------LRT  151 (285)
T ss_dssp             CEEEEECCTT-CHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHH
T ss_pred             ceeEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHH---------------------HHH
Confidence            6888999999 999999999999999999999999999987778888899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|++++++.++|.|.+++.|+||++||.++..+.++...|++||+|++.|+++++.|+++.||+||+|+||.|+|++.
T Consensus       152 N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  231 (285)
T 2c07_A          152 NLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMT  231 (285)
T ss_dssp             HTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred             hhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCch
Confidence            99999999999999999877899999999999999999999999999999999999999999999999999999999986


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...............+.+++..|||+|++.+.+  +.+....++|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l--~~~~~~~~~G  274 (285)
T 2c07_A          232 DKISEQIKKNIISNIPAGRMGTPEEVANLACFL--SSDKSGYING  274 (285)
T ss_dssp             --CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH--HSGGGTTCCS
T ss_pred             hhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHH--hCCCcCCCCC
Confidence            543211111111234678899999999986554  3444444444

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2.8e-37  Score=301.39  Aligned_cols=231  Identities=17%  Similarity=0.169  Sum_probs=192.7

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..                        ..
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~------------------------~~   59 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL------------------------GG   59 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT------------------------TC
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc------------------------CC
Confidence            5779999999999  99999999999999999999999975 444455554432                        22


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      +.++.+|++ |.++++++++++.+++|++|+||||||+...    .++.+.+.++++.+                     
T Consensus        60 ~~~~~~D~~-~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~---------------------  117 (261)
T 2wyu_A           60 ALLFRADVT-QDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA---------------------  117 (261)
T ss_dssp             CEEEECCTT-CHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHH---------------------
T ss_pred             cEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHH---------------------
Confidence            578899999 9999999999999999999999999998753    56778899999988                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|.+  .|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|
T Consensus       118 ~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  195 (261)
T 2wyu_A          118 LEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRT  195 (261)
T ss_dssp             HHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCC
T ss_pred             HHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcC
Confidence            999999999999999999964  489999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++.........  .......|++|++.|||++++.+.  ++++...+++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~--l~s~~~~~~tG  243 (261)
T 2wyu_A          196 VAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLF--LLSPLASGITG  243 (261)
T ss_dssp             TGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             chhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HcChhhcCCCC
Confidence            97543211000  011123477899999999998654  45555555554

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.1e-36  Score=296.01  Aligned_cols=234  Identities=22%  Similarity=0.265  Sum_probs=199.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.+.+                        .++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~------------------------~~~   59 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG------------------------GEA   59 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------CEE
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC------------------------Cce
Confidence            467899999999999999999999999999999999 8888888877776543                        468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.++++++|+||||||+....++.+.+.++++..                     +++|+
T Consensus        60 ~~~~~D~~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  117 (261)
T 1gee_A           60 IAVKGDVT-VESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKV---------------------IDTNL  117 (261)
T ss_dssp             EEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHhhh
Confidence            89999999 999999999999999999999999999987777888899999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++++++|.|.+++ .|+||++||..+..+.++...|++||+|++.|+++++.|++++||+||+|+||+|+|++..
T Consensus       118 ~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  197 (261)
T 1gee_A          118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh
Confidence            999999999999999876 7899999999999999999999999999999999999999999999999999999999865


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ........  ......+.++...|||+|++.+.+  +.+....++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~~~~~~~G  241 (261)
T 1gee_A          198 EKFADPEQRADVESMIPMGYIGEPEEIAAVAAWL--ASSEASYVTG  241 (261)
T ss_dssp             HHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHH--HSGGGTTCCS
T ss_pred             hcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCccccCCCC
Confidence            43211110  111124678899999999986554  4444444444

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.5e-37  Score=302.21  Aligned_cols=230  Identities=16%  Similarity=0.139  Sum_probs=191.3

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++||++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..+                        ..
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~------------------------~~   61 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG------------------------SD   61 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT------------------------CC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC------------------------Cc
Confidence            789999999999  9999999999999999999999987 45555555554332                        23


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCccc-CCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEE-MTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      .++.+|++ |.++++++++++.+++|++|+||||||+...    .++.+ .+.++++.+                     
T Consensus        62 ~~~~~D~~-~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~---------------------  119 (265)
T 1qsg_A           62 IVLQCDVA-EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIA---------------------  119 (265)
T ss_dssp             CEEECCTT-CHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHH---------------------
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHH---------------------
Confidence            57899999 9999999999999999999999999998753    56667 888999888                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.|+++++++++|.|.+  .|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|
T Consensus       120 ~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  197 (265)
T 1qsg_A          120 HDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT  197 (265)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCC
T ss_pred             HHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCcc
Confidence            999999999999999999974  489999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++..........  ......|++|++.|||++++.+  +++++...+++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~--~l~s~~~~~~tG  245 (265)
T 1qsg_A          198 LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA--FLCSDLSAGISG  245 (265)
T ss_dssp             TTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH--HHTSGGGTTCCS
T ss_pred             chhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHH--HHhCchhcCccC
Confidence            986532110010  0111247789999999999865  445555555554

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-36  Score=286.84  Aligned_cols=189  Identities=28%  Similarity=0.418  Sum_probs=176.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +|++|||||++|||+++|++|+++|+       +|++++|+.++++++.+++...+                        
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~------------------------   57 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG------------------------   57 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT------------------------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC------------------------
Confidence            68999999999999999999999999       99999999988888877775432                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++.++++++|+||||||+....++.+.+.++++..                     ++
T Consensus        58 ~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~  115 (244)
T 2bd0_A           58 ALTDTITADIS-DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYT---------------------MN  115 (244)
T ss_dssp             CEEEEEECCTT-SHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HH
T ss_pred             CeeeEEEecCC-CHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHH---------------------HH
Confidence            56889999999 999999999999999999999999999987778888899999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++++++|.|.+++.|+||++||..+..+.++...|++||+++++|+++|+.|++++||+|++|+||+|+|++
T Consensus       116 ~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  195 (244)
T 2bd0_A          116 TNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM  195 (244)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred             HhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence            99999999999999999887789999999999999999999999999999999999999999999999999999999997


Q ss_pred             Cc
Q psy3252         331 FE  332 (475)
Q Consensus       331 ~~  332 (475)
                      ..
T Consensus       196 ~~  197 (244)
T 2bd0_A          196 WG  197 (244)
T ss_dssp             TC
T ss_pred             hh
Confidence            54

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=4.3e-37  Score=296.05  Aligned_cols=222  Identities=23%  Similarity=0.304  Sum_probs=188.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||++|||+++|++|+++|++|++++|+.++   +.+++                            . +.++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----------------------------~-~~~~~   49 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----------------------------G-AVPLP   49 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----------------------------T-CEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----------------------------C-cEEEe
Confidence            6899999999999999999999999999999999765   22222                            1 45689


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ + ++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++|+.|++
T Consensus        50 ~D~~-~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~~~~  106 (239)
T 2ekp_A           50 TDLE-K-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRV---------------------LYLHLDVAF  106 (239)
T ss_dssp             CCTT-T-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHHHTHHHH
T ss_pred             cCCc-h-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHhHHHH
Confidence            9999 8 9999999999999999999999999987778888999999988                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccC--CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGI--YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      +++++++|.|.+++.|+||++||..+..+.  ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....
T Consensus       107 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  186 (239)
T 2ekp_A          107 LLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR  186 (239)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred             HHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccc
Confidence            999999999998888999999999998887  889999999999999999999999999999999999999999865422


Q ss_pred             cCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         336 KSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       336 ~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .....  ......|++|+..|||+|++.+.  ++++...+++|
T Consensus       187 ~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~--l~s~~~~~~tG  227 (239)
T 2ekp_A          187 QNPELYEPITARIPMGRWARPEEIARVAAV--LCGDEAEYLTG  227 (239)
T ss_dssp             TCHHHHHHHHTTCTTSSCBCHHHHHHHHHH--HTSGGGTTCCS
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCchhcCCCC
Confidence            11110  11123477899999999998654  45555555554

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-37  Score=300.91  Aligned_cols=226  Identities=21%  Similarity=0.278  Sum_probs=187.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++. ++                            .++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----------------------------~~~   52 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----------------------------PGI   52 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----------------------------TTE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----------------------------cCc
Confidence            3578999999999999999999999999999999999987654432 11                            247


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++    ++.+.++++|+||||||+....++.+.+.++|+.+                     +++|+
T Consensus        53 ~~~~~D~~-~~~~~~----~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~  106 (246)
T 2ag5_A           53 QTRVLDVT-KKKQID----QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFS---------------------MNLNV  106 (246)
T ss_dssp             EEEECCTT-CHHHHH----HHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             eEEEeeCC-CHHHHH----HHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHH---------------------HHHHH
Confidence            78999999 988887    45566899999999999987778888999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC-CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++++++|.|++++.|+||++||.++..+.+ +...|++||+|+++|+++++.|++++||+||+|+||+|+|++..
T Consensus       107 ~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  186 (246)
T 2ag5_A          107 RSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ  186 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchh
Confidence            99999999999999988889999999999988887 88999999999999999999999999999999999999999755


Q ss_pred             cccc-C-C-cc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 NEEK-S-K-PR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 ~~~~-~-~-~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .... . . ..   ......+.+|+..|||+|++.+.  ++++...+++|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~--l~s~~~~~~tG  234 (246)
T 2ag5_A          187 ERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVY--LASDESAYVTG  234 (246)
T ss_dssp             HHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             hhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HhCccccCCCC
Confidence            3111 0 0 00   01112477899999999998654  45555555555

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.5e-36  Score=291.41  Aligned_cols=232  Identities=22%  Similarity=0.248  Sum_probs=196.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+                       .++.++.
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~~~~~   58 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-----------------------DKVLRVR   58 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-----------------------GGEEEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----------------------CcEEEEE
Confidence            68999999999999999999999999999999999888877766521111                       5688999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC---cccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT---LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +|++ |.++++++++++.++++++|+||||||+....+   +.+.+.++++.+                     +++|+.
T Consensus        59 ~D~~-~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~---------------------~~~n~~  116 (250)
T 2cfc_A           59 ADVA-DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKV---------------------MAVNVR  116 (250)
T ss_dssp             CCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHH---------------------HHHHTH
T ss_pred             ecCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHH---------------------HHHhhH
Confidence            9999 999999999999999999999999999876555   778889999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |++++++.++|.|.+++.++||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+|+|++....
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  196 (250)
T 2cfc_A          117 GIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR  196 (250)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc
Confidence            99999999999999887899999999999999999999999999999999999999999999999999999999986542


Q ss_pred             ccCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......  .....+.++++.|||++++.+.  ++.+....++|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~--l~~~~~~~~~G  238 (250)
T 2cfc_A          197 LDQPELRDQVLARIPQKEIGTAAQVADAVMF--LAGEDATYVNG  238 (250)
T ss_dssp             HTSHHHHHHHHTTCTTCSCBCHHHHHHHHHH--HHSTTCTTCCS
T ss_pred             cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCchhhcccC
Confidence            1111111  1112467889999999998654  44444445444

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=4.7e-37  Score=295.97  Aligned_cols=223  Identities=25%  Similarity=0.243  Sum_probs=172.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|++|||||++|||+++|++|+++|++|+++ +|+.+.++++.+++...+                        .++
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~------------------------~~~   57 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG------------------------INV   57 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT------------------------CCE
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC------------------------CcE
Confidence            4679999999999999999999999999999998 678777887777776543                        468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++..                     +++|+
T Consensus        58 ~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  115 (247)
T 2hq1_A           58 VVAKGDVK-NPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDV---------------------LNTNL  115 (247)
T ss_dssp             EEEESCTT-SHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHH---------------------HHHTH
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------HHHhh
Confidence            89999999 999999999999999999999999999876666777777777777                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|.+++.|+||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||.+.|++...
T Consensus       116 ~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          116 KSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence            99999999999999987789999999999998999999999999999999999999999999999999999999997543


Q ss_pred             cccCCccccccccccCCCCChHHhhhccce
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      .............+.+++..|||++++.+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  225 (247)
T 2hq1_A          196 LPDKVKEMYLNNIPLKRFGTPEEVANVVGF  225 (247)
T ss_dssp             SCHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             cchHHHHHHHhhCCCCCCCCHHHHHHHHHH
Confidence            221111111112467889999999998654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-37  Score=296.99  Aligned_cols=237  Identities=22%  Similarity=0.300  Sum_probs=196.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+..+                       .+
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------~~   65 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-----------------------VK   65 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT-----------------------CC
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC-----------------------Ce
Confidence            3568899999999999999999999999999999999987666666666644321                       46


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++|
T Consensus        66 ~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N  123 (265)
T 1h5q_A           66 TKAYQCDVS-NTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFV---------------------YDVN  123 (265)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHH---------------------HHHH
T ss_pred             eEEEEeeCC-CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHH---------------------Hhhh
Confidence            889999999 999999999999999999999999999987778888899999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCC-------ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         253 LYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYG-------LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~-------~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                      +.|+++++++++|.|.+++ .|+||++||..+..+.+.       ...|++||++++.|+++++.|++++||+||+|+||
T Consensus       124 ~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  203 (265)
T 1h5q_A          124 VFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPG  203 (265)
T ss_dssp             THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             hHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecC
Confidence            9999999999999998765 489999999988766542       78999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         325 DTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       325 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|+|++................+.+++..|||++++.+.+  +.+....++|
T Consensus       204 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~~~~~~~G  253 (265)
T 1h5q_A          204 YVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILL--LSDHATYMTG  253 (265)
T ss_dssp             SBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHH--HSGGGTTCCS
T ss_pred             ccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhh--ccCchhcCcC
Confidence            9999986653211111111234678899999999986554  3333344443

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=4.1e-37  Score=301.13  Aligned_cols=222  Identities=22%  Similarity=0.303  Sum_probs=191.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++           .                        .++.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~------------------------~~~~   49 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------E------------------------AKYD   49 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------S------------------------CSSE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------C------------------------CceE
Confidence            4679999999999999999999999999999999998653           1                        3467


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+++|++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        50 ~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~  107 (264)
T 2dtx_A           50 HIECDVT-NPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRI---------------------IDVNLF  107 (264)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHH---------------------HHHHTH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHhhH
Confidence            8899999 999999999999999999999999999987778888999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++ |+||+|+||+|+|++....
T Consensus       108 g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~  186 (264)
T 2dtx_A          108 GYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKA  186 (264)
T ss_dssp             HHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhh
Confidence            999999999999998888999999999999999999999999999999999999999999 9999999999999976542


Q ss_pred             cc-----CC----c--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EK-----SK----P--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~-----~~----~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ..     ..    .  .......+.+|++.|||+|++.+.  ++.+...+++|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~--l~s~~~~~~tG  237 (264)
T 2dtx_A          187 AELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAF--LASREASFITG  237 (264)
T ss_dssp             HHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             hhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH--HhCchhcCCCC
Confidence            10     00    0  011112477899999999998654  44555555555

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.4e-37  Score=298.88  Aligned_cols=222  Identities=14%  Similarity=0.092  Sum_probs=186.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEE-e--cChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-A--RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~--R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ||++|||||++|||+++|++|+++|++|+++ +  |+.++++++.+++  .+                            
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~----------------------------   50 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG----------------------------   50 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT----------------------------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC----------------------------
Confidence            5899999999999999999999999999999 6  9988887766554  11                            


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC---CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC---GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                         +|+. |.++++++++++.+++|++|+||||||+...   .++.+.+.++++.+                     +++
T Consensus        51 ---~~~~-~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~---------------------~~~  105 (244)
T 1zmo_A           51 ---TIAL-AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQM---------------------FEA  105 (244)
T ss_dssp             ---EEEC-CCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHH---------------------HHH
T ss_pred             ---Cccc-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHH---------------------HHH
Confidence               2344 5567888999999999999999999999877   78889999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       106 N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          106 LSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             HhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            99999999999999999888899999999999999999999999999999999999999999999999999999999987


Q ss_pred             ---cccccCCc-ccccc-ccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         332 ---ENEEKSKP-RETSL-ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       332 ---~~~~~~~~-~~~~~-~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                         ........ ..... ..+++|+++|||+|++.+  +++++...+++|
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~--~l~s~~~~~~tG  233 (244)
T 1zmo_A          186 FPTSDWENNPELRERVDRDVPLGRLGRPDEMGALIT--FLASRRAAPIVG  233 (244)
T ss_dssp             BCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHH--HHHTTTTGGGTT
T ss_pred             cccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHH--HHcCccccCccC
Confidence               43211100 00111 347889999999999864  455665555555

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=3.2e-37  Score=302.26  Aligned_cols=229  Identities=18%  Similarity=0.173  Sum_probs=191.2

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCEEEEEecChhH-HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          95 APTNGTLSVTGG--SSGIGKHVAIEAAKRGAHVTIVARDEKK-LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        95 ~l~gk~vLITGa--s~GIG~aiA~~La~~Ga~Vvl~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +++||++|||||  ++|||+++|++|+++|++|++++|+.++ ++++.+++    +                       .
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-----------------------~   56 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL----P-----------------------A   56 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS----S-----------------------S
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc----C-----------------------C
Confidence            478999999999  9999999999999999999999998765 34333221    1                       3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcC---CccEEEEcccccc-----CCCcccCCHHHHHHhhhhhhhccccchhhcc
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCG---PVYMLVNCAGMAL-----CGTLEEMTMQDIKVMEQPLWLRGYHTRLALW  243 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g---~IDvLVnnAG~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (475)
                      ++.++.+|++ |.++++++++++.+++|   ++|+||||||+..     ..++.+.+.++|+.+                
T Consensus        57 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~----------------  119 (269)
T 2h7i_A           57 KAPLLELDVQ-NEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKG----------------  119 (269)
T ss_dssp             CCCEEECCTT-CHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHH----------------
T ss_pred             CceEEEccCC-CHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHH----------------
Confidence            4668899999 99999999999999999   9999999999875     467788899999988                


Q ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         244 RSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       244 ~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                           +++|+.|+++++++++|.|.++  |+||++||..+ .+.+++..|++||+|+++|+++|+.|++++||+||+|+|
T Consensus       120 -----~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P  191 (269)
T 2h7i_A          120 -----IHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAA  191 (269)
T ss_dssp             -----HHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             -----HHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEec
Confidence                 9999999999999999999753  89999999876 677889999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccC--Ccc----------ccccccccC-CCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         324 PDTDTPGFENEEKS--KPR----------ETSLISQTG-GLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       324 G~v~T~~~~~~~~~--~~~----------~~~~~~~~~-~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      |+|+|++.......  .+.          ......|++ |+++|||||++.  +|++++..++++|-
T Consensus       192 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v--~~L~s~~~~~itG~  256 (269)
T 2h7i_A          192 GPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTV--CALLSDWLPATTGD  256 (269)
T ss_dssp             CCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHH--HHHHSSSCTTCCSE
T ss_pred             CcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHH--HHHhCchhccCcce
Confidence            99999976532110  000          011234788 699999999975  46777777777763

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3.2e-36  Score=292.33  Aligned_cols=225  Identities=25%  Similarity=0.295  Sum_probs=195.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+                        .++
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~   64 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG------------------------HDV   64 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCE
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------Cce
Confidence            56889999999999999999999999999999999999988888887776543                        468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.+|++ |.++++++++++.++++++|+||||||+.. ..++.+.+.++++..                     +++|
T Consensus        65 ~~~~~D~~-~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~~n  122 (260)
T 3awd_A           65 SSVVMDVT-NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQ---------------------VDIN  122 (260)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHH---------------------HHHH
T ss_pred             EEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHH---------------------HHhc
Confidence            89999999 999999999999999999999999999876 567788899999887                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC--hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL--AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~--~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +.|+++++++++|.|.+++.++||++||..+..+.++.  ..|++||++++.|+++++.|++++||+|++|+||+|+|++
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~  202 (260)
T 3awd_A          123 LNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTL  202 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             cHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccch
Confidence            99999999999999988778999999999998887777  8999999999999999999999999999999999999998


Q ss_pred             Cc-ccccCC-ccccccccccCCCCChHHhhhcccee
Q psy3252         331 FE-NEEKSK-PRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       331 ~~-~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      .. ...... ........+.+++..|||++++.+.+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (260)
T 3awd_A          203 TRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFL  238 (260)
T ss_dssp             THHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence            65 221100 00111124678899999999987554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=3e-36  Score=293.14  Aligned_cols=231  Identities=23%  Similarity=0.270  Sum_probs=190.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+....                 ....++.
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~   66 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEG-----------------PPRGNHA   66 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-----------------------------CCE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCcccc-----------------ccCcceE
Confidence            46799999999999999999999999999999999999888777665543221000                 0003577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCc-cEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPV-YMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~I-DvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++++++++.+.+++|++ |+||||||+....++.+.+.++++.+                     +++|+
T Consensus        67 ~~~~D~~-~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  124 (264)
T 2pd6_A           67 AFQADVS-EARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKV---------------------IAVNL  124 (264)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHH---------------------Hhhcc
Confidence            8999999 9999999999999999999 99999999987778888899999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++++++|.|.+++ .|+||++||..+..+.++...|++||+|++.|+++++.|++++||+|++|+||+|.|++..
T Consensus       125 ~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  204 (264)
T 2pd6_A          125 KGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ  204 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--
T ss_pred             HHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh
Confidence            999999999999998876 6899999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCCccccccccccCCCCChHHhhhcccee
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      ..............+.+++..|+|++++.+.+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  236 (264)
T 2pd6_A          205 KVPQKVVDKITEMIPMGHLGDPEDVADVVAFL  236 (264)
T ss_dssp             --------CTGGGCTTCSCBCHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            43221111112234678899999999987554

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.3e-36  Score=290.78  Aligned_cols=182  Identities=24%  Similarity=0.343  Sum_probs=160.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++   .                        .++.++.+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~~~~~~~   54 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---S------------------------NNVGYRAR   54 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---S------------------------SCCCEEEC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---h------------------------hccCeEee
Confidence            68999999999999999999999999999999998888776554   1                        45678999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ +.++++++++++.+.   .|+||||||+....++.+.+.++++++                     +++|+.|+++
T Consensus        55 D~~-~~~~v~~~~~~~~~~---~d~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~g~~~  109 (230)
T 3guy_A           55 DLA-SHQEVEQLFEQLDSI---PSTVVHSAGSGYFGLLQEQDPEQIQTL---------------------IENNLSSAIN  109 (230)
T ss_dssp             CTT-CHHHHHHHHHSCSSC---CSEEEECCCCCCCSCGGGSCHHHHHHH---------------------HHHHHHHHHH
T ss_pred             cCC-CHHHHHHHHHHHhhc---CCEEEEeCCcCCCCccccCCHHHHHHH---------------------HHHHHHHHHH
Confidence            999 999999998876543   499999999988888999999999988                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      ++++++|.|.+++ ++||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+++..
T Consensus       110 l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  183 (230)
T 3guy_A          110 VLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET  183 (230)
T ss_dssp             HHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------
T ss_pred             HHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh
Confidence            9999999998765 4999999999999999999999999999999999999999999999999999999997654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2e-36  Score=291.11  Aligned_cols=222  Identities=24%  Similarity=0.278  Sum_probs=193.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEE-EecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ||++|||||++|||+++|++|+++|++|++ .+|+.+.++++.+++...+                        .++.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~   56 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG------------------------GQAITF   56 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT------------------------CEEEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------CcEEEE
Confidence            589999999999999999999999999998 5899888888877776543                        468889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.++++++++++.++++++|+||||||+....++.+.+.++++.+                     +++|+.|+
T Consensus        57 ~~D~~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~  114 (244)
T 1edo_A           57 GGDVS-KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEV---------------------IDLNLTGV  114 (244)
T ss_dssp             ECCTT-SHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTHHH
T ss_pred             eCCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHH---------------------HHhhhHHH
Confidence            99999 999999999999999999999999999987777888899999888                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      ++++++++|.|.+++.|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++......
T Consensus       115 ~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  194 (244)
T 1edo_A          115 FLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE  194 (244)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH
T ss_pred             HHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh
Confidence            99999999999987789999999999999999999999999999999999999999999999999999999997654321


Q ss_pred             CCccccccccccCCCCChHHhhhccceee
Q psy3252         337 SKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       337 ~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ..........+.+++..|+|++++.+.+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (244)
T 1edo_A          195 DMEKKILGTIPLGRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             HHHHHHHTSCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Confidence            11111112346788999999999866543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=2.3e-36  Score=291.10  Aligned_cols=227  Identities=22%  Similarity=0.259  Sum_probs=196.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.+..+                       .++
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~   59 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-----------------------VKA   59 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC-----------------------CCE
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC-----------------------Cce
Confidence            457899999999999999999999999999999999999888888777754211                       457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++..                     +++|+
T Consensus        60 ~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  117 (248)
T 2pnf_A           60 HGVEMNLL-SEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEV---------------------LKVNL  117 (248)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------Hhhhh
Confidence            88999999 999999999999999999999999999987777888899999888                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|++++++.++|.|.+++.++||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       118 ~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  197 (248)
T 2pnf_A          118 TGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV  197 (248)
T ss_dssp             HHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh
Confidence            99999999999999988789999999999988989999999999999999999999999999999999999999997654


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceee
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .............+.+++..|+|++++.+.++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  229 (248)
T 2pnf_A          198 LSEEIKQKYKEQIPLGRFGSPEEVANVVLFLC  229 (248)
T ss_dssp             SCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            22111011111246688999999999876544

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.7e-36  Score=291.33  Aligned_cols=223  Identities=22%  Similarity=0.302  Sum_probs=193.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...                         .++.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------------------~~~~   57 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-------------------------DQIQ   57 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-------------------------TTEE
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-------------------------CceE
Confidence            467999999999999999999999999999999999988877766655321                         3578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++|+.
T Consensus        58 ~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~  115 (251)
T 1zk4_A           58 FFQHDSS-DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKL---------------------LAVNLD  115 (251)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHhhhH
Confidence            8999999 999999999999999999999999999987777888899999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-CeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCCCCCCC
Q psy3252         255 GTIHMTKALVEGMKQRGR-GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~-g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v~T~~~  331 (475)
                      |++++++.++|.|.+++. ++||++||..+..+.++...|++||++++.|+++++.|+.  ++||+|++|+||+|+|++.
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~  195 (251)
T 1zk4_A          116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV  195 (251)
T ss_dssp             HHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhh
Confidence            999999999999998776 8999999999999999999999999999999999999998  8999999999999999976


Q ss_pred             cccccCCc-cccccccccCCCCChHHhhhcccee
Q psy3252         332 ENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       332 ~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      ........ .......+.+++..|+|++++.+.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  229 (251)
T 1zk4_A          196 DDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYL  229 (251)
T ss_dssp             HTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence            54321100 0011234678899999999986654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.3e-35  Score=294.71  Aligned_cols=228  Identities=17%  Similarity=0.197  Sum_probs=194.6

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+                       .
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------~   76 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-----------------------N   76 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----------------------S
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----------------------C
Confidence            34568899999999999999999999999999999999999998888887765421                       4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++
T Consensus        77 ~~~~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~  134 (302)
T 1w6u_A           77 KVHAIQCDVR-DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTI---------------------TDI  134 (302)
T ss_dssp             CEEEEECCTT-CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHH---------------------HHH
T ss_pred             ceEEEEeCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHH---------------------HHH
Confidence            6889999999 999999999999999999999999999887777888899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHH-hCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC-
Q psy3252         252 NLYGTIHMTKALVEGMK-QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP-  329 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~-~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~-  329 (475)
                      |+.|++++++++++.|. +++.++||++||..+..+.++...|++||+|++.|+++++.|++++||+|++|+||+|+|+ 
T Consensus       135 N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  214 (302)
T 1w6u_A          135 VLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  214 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             HhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence            99999999999999998 4456899999999999999999999999999999999999999999999999999999998 


Q ss_pred             CCcccccCCcc--ccccccccCCCCChHHhhhcccee
Q psy3252         330 GFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       330 ~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      +..........  ......+.++++.|||++++.+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l  251 (302)
T 1w6u_A          215 AFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFL  251 (302)
T ss_dssp             ----CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence            43332221111  111234778899999999986543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3.2e-36  Score=291.31  Aligned_cols=233  Identities=23%  Similarity=0.274  Sum_probs=196.9

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~   57 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---------------------------A   57 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------------------------G
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------------------------c
Confidence            4467889999999999999999999999999999999999988877766651                           3


Q ss_pred             eE-EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         172 FI-EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       172 ~v-~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++ .++.+|++ |.++++++++++.+ ++++|+||||||+....++.+.+.++++.+                     ++
T Consensus        58 ~~~~~~~~D~~-~~~~~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~  114 (254)
T 2wsb_A           58 AVAARIVADVT-DAEAMTAAAAEAEA-VAPVSILVNSAGIARLHDALETDDATWRQV---------------------MA  114 (254)
T ss_dssp             GEEEEEECCTT-CHHHHHHHHHHHHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHH---------------------HH
T ss_pred             cceeEEEEecC-CHHHHHHHHHHHHh-hCCCcEEEECCccCCCCCcccCCHHHHHHH---------------------HH
Confidence            45 78999999 99999999999988 899999999999987777888899999888                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC--hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL--AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~--~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +|+.|++++++.++|.|.+++.|+||++||..+..+.++.  ..|++||++++.++++++.|++++||+|++|+||+|+|
T Consensus       115 ~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t  194 (254)
T 2wsb_A          115 VNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVAT  194 (254)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCS
T ss_pred             HHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCc
Confidence            9999999999999999998888999999999998888887  89999999999999999999999999999999999999


Q ss_pred             CCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++..........  ......+.++...|||++++.+.+  +.+....++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~~~~~~~G  242 (254)
T 2wsb_A          195 EMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFL--ASPAASYVTG  242 (254)
T ss_dssp             HHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHH--HSGGGTTCCS
T ss_pred             hhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH--hCcccccccC
Confidence            976532211010  011124678899999999987654  3333334443

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3.9e-36  Score=295.36  Aligned_cols=236  Identities=22%  Similarity=0.190  Sum_probs=196.4

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+...+                        .
T Consensus        28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~   83 (279)
T 3ctm_A           28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG------------------------V   83 (279)
T ss_dssp             GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC------------------------S
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------------------C
Confidence            3467899999999999999999999999999999999999887777776665443                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcc-cCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLE-EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ++.++.+|++ |.++++++++++.+.++++|+||||||+... .++. +.+.++++.+                     +
T Consensus        84 ~~~~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~---------------------~  141 (279)
T 3ctm_A           84 HSKAYKCNIS-DPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKI---------------------I  141 (279)
T ss_dssp             CEEEEECCTT-CHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHH---------------------H
T ss_pred             cceEEEeecC-CHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHH---------------------H
Confidence            6788999999 9999999999999999999999999998765 5666 7778888877                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc--CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG--IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~--~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      ++|+.|++++++.+++.|.+++.|+||++||..+..+  .++...|++||++++.|+++++.|++++| +||+|+||+|+
T Consensus       142 ~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~  220 (279)
T 3ctm_A          142 SVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYID  220 (279)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBS
T ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCc
Confidence            9999999999999999999887899999999999887  77888999999999999999999999999 99999999999


Q ss_pred             CCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         328 TPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       328 T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |++................+.+++..|||+|++.+.  ++.+...+++|
T Consensus       221 t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~--l~s~~~~~~tG  267 (279)
T 3ctm_A          221 TDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLY--LASNASTFTTG  267 (279)
T ss_dssp             STTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHH--HHSGGGTTCCS
T ss_pred             cccccccChHHHHHHHHhCCccCCcCHHHHHHHHHH--HhCccccCccC
Confidence            998743211111111123477899999999998654  44444444444

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7e-36  Score=293.98  Aligned_cols=229  Identities=23%  Similarity=0.227  Sum_probs=193.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+..                      .+
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------------------~~   84 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP----------------------GT   84 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS----------------------SE
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC----------------------ce
Confidence            34578999999999999999999999999999999999999988888887765321                      46


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++|
T Consensus        85 ~~~~~~Dl~-~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N  142 (279)
T 1xg5_A           85 LIPYRCDLS-NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDM---------------------FNVN  142 (279)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHHH
T ss_pred             EEEEEecCC-CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            888999999 999999999999999999999999999987778888899999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC--CeEEEecccccc--ccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGR--GCIVITASQAAN--LGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDT  326 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~--g~IV~iSS~a~~--~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v  326 (475)
                      +.+++++++.+++.|++++.  |+||++||..+.  .+.++...|++||++++.|+++++.|++  +.||+||+|+||+|
T Consensus       143 ~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v  222 (279)
T 1xg5_A          143 VLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV  222 (279)
T ss_dssp             THHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCB
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcc
Confidence            99999999999999998764  899999999987  5677788999999999999999999998  89999999999999


Q ss_pred             CCCCCcccccCCccccccccccCCCCChHHhhhccceee
Q psy3252         327 DTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       327 ~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      +|++................+..+...|+|+|++.+.++
T Consensus       223 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~  261 (279)
T 1xg5_A          223 ETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVL  261 (279)
T ss_dssp             CSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHH
T ss_pred             cchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHh
Confidence            999743222111111111234567899999999876543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.5e-37  Score=320.02  Aligned_cols=224  Identities=15%  Similarity=-0.004  Sum_probs=184.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCEEEEEecChhHHHH------------HHHHHHHhCCCCcchhhhhHHHhhh
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAK-RGAHVTIVARDEKKLLQ------------AQEEIKKACPNPKFIRFIEYEEIKK  162 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~-~Ga~Vvl~~R~~~~l~~------------~~~~l~~~~~~~~~~~~~~~~~~~~  162 (475)
                      -.+|++||||||+|||+++|+.|++ +|++|++++|+.+.+++            +.+++.+.+                
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G----------------  122 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG----------------  122 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT----------------
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC----------------
Confidence            3589999999999999999999999 99999999998654331            234444433                


Q ss_pred             cCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhc-CCccEEEEccccc-------------cCCCc------------
Q psy3252         163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMA-------------LCGTL------------  216 (475)
Q Consensus       163 ~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~-------------~~~~~------------  216 (475)
                              .++..+.+|++ |.++++++++.+.+++ |+||+||||||+.             ...++            
T Consensus       123 --------~~a~~i~~Dvt-d~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~  193 (422)
T 3s8m_A          123 --------LYSKSINGDAF-SDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTN  193 (422)
T ss_dssp             --------CCEEEEESCTT-SHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETT
T ss_pred             --------CcEEEEEecCC-CHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccc
Confidence                    46788999999 9999999999999999 9999999999972             22333            


Q ss_pred             ---------ccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH-HHHHHHHHHHHhCCCCeEEEecccccccc
Q psy3252         217 ---------EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI-HMTKALVEGMKQRGRGCIVITASQAANLG  286 (475)
Q Consensus       217 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~-~l~~~~lp~m~~~~~g~IV~iSS~a~~~~  286 (475)
                               .+.+.++|+.+                     +++|..+.+ .+++++++.+...+.|+|||+||+++..+
T Consensus       194 ~~~~~~~~~~~~t~e~~~~~---------------------v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~  252 (422)
T 3s8m_A          194 KDTIIQASIEPASAQEIEDT---------------------ITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEIT  252 (422)
T ss_dssp             TTEEEEEEECCCCHHHHHHH---------------------HHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG
T ss_pred             cccccccccCCCCHHHHHHH---------------------HHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc
Confidence                     35788888877                     999999997 88888876543334589999999999988


Q ss_pred             CCCC--hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCCccccccccccCCCCChHHhhhcccee
Q psy3252         287 IYGL--AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       287 ~~~~--~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      .|++  ++|++||+|+.+|+++||.||+++|||||+|+||.|.|++................+++|.++||+++++...+
T Consensus       253 ~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L  332 (422)
T 3s8m_A          253 WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRL  332 (422)
T ss_dssp             HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHH
Confidence            8766  99999999999999999999999999999999999999987655332222223345899999999999987665


Q ss_pred             e
Q psy3252         365 T  365 (475)
Q Consensus       365 ~  365 (475)
                      +
T Consensus       333 ~  333 (422)
T 3s8m_A          333 F  333 (422)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1e-35  Score=295.42  Aligned_cols=191  Identities=24%  Similarity=0.268  Sum_probs=167.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.++                       .++.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------~~~~   65 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-----------------------ENVV   65 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-----------------------CSEE
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-----------------------CceE
Confidence            46799999999999999999999999999999999999999999888876543                       4688


Q ss_pred             EEEeecCCCH-HHHHHHHHHHHHhcCCccEEEEccccccC------------------------------CCcccCCHHH
Q psy3252         175 YVSLDISKDY-ENIRSALQPAMDRCGPVYMLVNCAGMALC------------------------------GTLEEMTMQD  223 (475)
Q Consensus       175 ~~~~Dvt~d~-~~v~~~~~~i~~~~g~IDvLVnnAG~~~~------------------------------~~~~~~~~~~  223 (475)
                      ++.+|++ |. ++++++++.+.+.+++||+||||||+...                              ..+.+.+.++
T Consensus        66 ~~~~Dl~-~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (311)
T 3o26_A           66 FHQLDVT-DPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYEL  144 (311)
T ss_dssp             EEECCTT-SCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHH
T ss_pred             EEEccCC-CcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhh
Confidence            9999999 86 99999999999999999999999998742                              1334556666


Q ss_pred             HHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC----------------
Q psy3252         224 IKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI----------------  287 (475)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------------  287 (475)
                      ++.+                     +++|+.|+++++++++|.|++++.|+||++||.++..+.                
T Consensus       145 ~~~~---------------------~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~  203 (311)
T 3o26_A          145 AEEC---------------------LKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDAL  203 (311)
T ss_dssp             HHHH---------------------HHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGC
T ss_pred             hhhh---------------------eeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhcccccc
Confidence            6666                     999999999999999999998888999999999887653                


Q ss_pred             ---------------------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         288 ---------------------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       288 ---------------------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                                                 ++...|++||+|+++|+++|+.|+.+  |+||+|+||+|+|+|..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~  273 (311)
T 3o26_A          204 TEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNY  273 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGT
T ss_pred             chhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcC
Confidence                                       45678999999999999999999865  99999999999999644

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=4e-36  Score=315.98  Aligned_cols=233  Identities=22%  Similarity=0.212  Sum_probs=194.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..++||++|||||++|||+++|++|+++|++|++++|+... +++.+.+.+.                          .+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--------------------------~~  261 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--------------------------GG  261 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--------------------------TC
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--------------------------CC
Confidence            34689999999999999999999999999999999997432 2222222221                          24


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCC-ccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGP-VYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~-IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.||++ |.++++++++++.+++++ ||+||||||+.....+.+.+.++|+.+                     +++|
T Consensus       262 ~~~~~Dvt-d~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~---------------------~~~n  319 (454)
T 3u0b_A          262 TALTLDVT-ADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAV---------------------IAVN  319 (454)
T ss_dssp             EEEECCTT-STTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHH
T ss_pred             eEEEEecC-CHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHH---------------------HHHH
Confidence            57899999 999999999999999986 999999999998888999999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|++++++++++.|.+++.|+||++||.++..+.+++..|++||+++++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus       320 v~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  399 (454)
T 3u0b_A          320 LLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTE  399 (454)
T ss_dssp             THHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----
T ss_pred             HHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhh
Confidence            99999999999999988888999999999999999999999999999999999999999999999999999999999887


Q ss_pred             ccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ..............+++|.++|||++++.  +|++++..++++|-
T Consensus       400 ~~~~~~~~~~~~~~~l~r~g~pedvA~~v--~fL~s~~a~~itG~  442 (454)
T 3u0b_A          400 AIPLATREVGRRLNSLFQGGQPVDVAELI--AYFASPASNAVTGN  442 (454)
T ss_dssp             ------CHHHHHSBTTSSCBCHHHHHHHH--HHHHCGGGTTCCSC
T ss_pred             hcchhhHHHHHhhccccCCCCHHHHHHHH--HHHhCCccCCCCCc
Confidence            65443333334456788999999999875  45677777777763

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.1e-37  Score=299.17  Aligned_cols=219  Identities=20%  Similarity=0.258  Sum_probs=185.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAK-RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~-~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++|++|||||++|||+++|++|++ .|++|++++|+.+..                                  ...+.
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----------------------------------~~~~~   47 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----------------------------------AENLK   47 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----------------------------------CTTEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----------------------------------cccce
Confidence            3578999999999999999999999 788999999875310                                  03468


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++.+.  ++++|+||||||+....++.+.+.++|+.+                     +++|+.
T Consensus        48 ~~~~Dv~-~~~~v~~~~~~~~--~~~id~lv~nAg~~~~~~~~~~~~~~~~~~---------------------~~vN~~  103 (244)
T 4e4y_A           48 FIKADLT-KQQDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDIDIESIKKV---------------------LDLNVW  103 (244)
T ss_dssp             EEECCTT-CHHHHHHHHHHTT--TCCEEEEEECCCCCCCBCTTTSCHHHHHHH---------------------HHHHTH
T ss_pred             EEecCcC-CHHHHHHHHHHHH--hCCCCEEEECCccCCCCCcccCCHHHHHHH---------------------HHHccH
Confidence            8999999 9999999995553  789999999999988888999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|.|.++  |+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       104 g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  181 (244)
T 4e4y_A          104 SSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNL  181 (244)
T ss_dssp             HHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHH
Confidence            9999999999999765  89999999999999999999999999999999999999999999999999999999986543


Q ss_pred             ccC-----------CccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         335 EKS-----------KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       335 ~~~-----------~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ...           .........+++|++.|||+|++.+  +++++...+++|
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~--~l~s~~~~~itG  232 (244)
T 4e4y_A          182 IQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVI--FLLSDKSKFMTG  232 (244)
T ss_dssp             HHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCS
T ss_pred             HHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHH--HHhcCccccccC
Confidence            221           1111122357899999999999855  455665666655

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=9.5e-38  Score=315.23  Aligned_cols=243  Identities=15%  Similarity=0.098  Sum_probs=190.6

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          97 TNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        97 ~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++|++|||||++  |||+++|++|+++|++|++++|+...  .+...-.+.....         . ............+.
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~--~l~~r~~~~~~~~---------~-~~~~~~~~~~~~~~   68 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY--NIFMKNYKNGKFD---------N-DMIIDKDKKMNILD   68 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHH--HHHHHHHHTTTTT---------G-GGBCSSSCBCCEEE
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccc--cccccchHHHHHH---------H-HHHHhhcccccccc
Confidence            378999999986  99999999999999999988876521  0111100100000         0 00000011124578


Q ss_pred             EEEeecCCCH--H------------------HHHHHHHHHHHhcCCccEEEEccccc--cCCCcccCCHHHHHHhhhhhh
Q psy3252         175 YVSLDISKDY--E------------------NIRSALQPAMDRCGPVYMLVNCAGMA--LCGTLEEMTMQDIKVMEQPLW  232 (475)
Q Consensus       175 ~~~~Dvt~d~--~------------------~v~~~~~~i~~~~g~IDvLVnnAG~~--~~~~~~~~~~~~~~~~~~~~~  232 (475)
                      ++.+|++ +.  +                  +++++++++.+++|+||+||||||+.  ...++.+.+.++|+.+     
T Consensus        69 ~~~~Dv~-~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~-----  142 (329)
T 3lt0_A           69 MLPFDAS-FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDA-----  142 (329)
T ss_dssp             EEECCTT-CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHH-----
T ss_pred             ccccccc-ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHH-----
Confidence            8999999 76  7                  99999999999999999999999985  3578889999999988     


Q ss_pred             hccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCCh-hhHHHHHHHHHHHHHHHHHH
Q psy3252         233 LRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLA-AYTSSKFALKGFAEALYMEV  311 (475)
Q Consensus       233 ~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~-~Y~aSKaAl~~l~~sLa~El  311 (475)
                                      +++|+.|+++++++++|.|+++  |+||++||.++..+.++.. .|++||+|+.+|+++|+.|+
T Consensus       143 ----------------~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el  204 (329)
T 3lt0_A          143 ----------------LSKSSYSLISLCKYFVNIMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHL  204 (329)
T ss_dssp             ----------------HHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------------HHHHhHHHHHHHHHHHHHHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence                            9999999999999999999875  8999999999999999996 99999999999999999999


Q ss_pred             cc-CCcEEEEEeCCCCCCCCCcccccCCc---------------------------------------------cccccc
Q psy3252         312 KQ-SGLTITLCLPPDTDTPGFENEEKSKP---------------------------------------------RETSLI  345 (475)
Q Consensus       312 ~~-~gIrVn~V~PG~v~T~~~~~~~~~~~---------------------------------------------~~~~~~  345 (475)
                      ++ +||+||+|+||+|+|+|........+                                             ......
T Consensus       205 ~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (329)
T 3lt0_A          205 GRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKY  284 (329)
T ss_dssp             HHHHCCEEEEEEECCCCCHHHHTCC------------------------------------------CHHHHHHHHHHHH
T ss_pred             CCccCeEEEEEecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhc
Confidence            98 89999999999999998765422110                                             011123


Q ss_pred             cccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         346 SQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       346 ~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .|++|+++|||||++.  +||+++...+++|-
T Consensus       285 ~p~~r~~~peevA~~v--~fL~s~~a~~itG~  314 (329)
T 3lt0_A          285 APLRQKLLSTDIGSVA--SFLLSRESRAITGQ  314 (329)
T ss_dssp             SSSCSCCCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             CcccCcCCHHHHHHHH--HHHhCchhccccCc
Confidence            5889999999999875  46777777777763

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=8.1e-36  Score=288.41  Aligned_cols=225  Identities=21%  Similarity=0.288  Sum_probs=195.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+                        .+
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------------~~   61 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG------------------------GQ   61 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CC
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC------------------------Cc
Confidence            456889999999999999999999999999999999999998888888776543                        45


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.++++++|+||||||+....++ +.+.++++..                     +++|
T Consensus        62 ~~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~---------------------~~~N  118 (255)
T 1fmc_A           62 AFACRCDIT-SEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRA---------------------YELN  118 (255)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHH---------------------HHHH
T ss_pred             eEEEEcCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCC-CCCHHHHHHH---------------------HHHh
Confidence            788999999 9999999999999999999999999998766555 6788888887                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|+++++++++|.|.+++.++||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||.+.|++..
T Consensus       119 ~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~  198 (255)
T 1fmc_A          119 VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK  198 (255)
T ss_dssp             THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhh
Confidence            99999999999999998778999999999999998999999999999999999999999999999999999999999754


Q ss_pred             ccccCC-ccccccccccCCCCChHHhhhcccee
Q psy3252         333 NEEKSK-PRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       333 ~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      ...... ........+.++++.|+|++++.+.+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  231 (255)
T 1fmc_A          199 SVITPEIEQKMLQHTPIRRLGQPQDIANAALFL  231 (255)
T ss_dssp             TTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHH
T ss_pred             hccChHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            321110 01111124778899999999986554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.4e-36  Score=328.10  Aligned_cols=221  Identities=27%  Similarity=0.307  Sum_probs=189.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh---------hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE---------KKLLQAQEEIKKACPNPKFIRFIEYEEIKKAC  164 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~---------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (475)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++.+.+                  
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g------------------   65 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG------------------   65 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT------------------
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC------------------
Confidence            457899999999999999999999999999999998765         66777777776543                  


Q ss_pred             CCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccc
Q psy3252         165 PNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWR  244 (475)
Q Consensus       165 ~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (475)
                            .++   .+|++ |.++++++++++.++||+||+||||||+....++.+++.++|+.+                 
T Consensus        66 ------~~~---~~d~~-d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~-----------------  118 (604)
T 2et6_A           66 ------GVA---VADYN-NVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLV-----------------  118 (604)
T ss_dssp             ------CEE---EEECC-CTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHH-----------------
T ss_pred             ------CeE---EEEcC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH-----------------
Confidence                  222   36888 778899999999999999999999999987788999999999988                 


Q ss_pred             cchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         245 SWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       245 ~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                          |+||+.|+|+++|+++|+|++++.|+|||+||.++..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||
T Consensus       119 ----~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          119 ----IDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             ----HHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ----HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence                9999999999999999999988889999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         325 DTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       325 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                       +.|+|......   .      ...+...||+|+.+.  +||+++. .+++|
T Consensus       195 -~~T~m~~~~~~---~------~~~~~~~pe~vA~~v--~~L~s~~-~~itG  233 (604)
T 2et6_A          195 -ARSRMTESIMP---P------PMLEKLGPEKVAPLV--LYLSSAE-NELTG  233 (604)
T ss_dssp             -CCCHHHHTTSC---H------HHHTTCSHHHHHHHH--HHHTSSS-CCCCS
T ss_pred             -CcCccccccCC---h------hhhccCCHHHHHHHH--HHHhCCc-ccCCC
Confidence             68887543211   0      011346999999875  4677776 66665

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1e-36  Score=311.22  Aligned_cols=225  Identities=12%  Similarity=-0.015  Sum_probs=187.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH-cCCEEEEEecChhHHH------------HHHHHHHHhCCCCcchhhhhHHHhh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAK-RGAHVTIVARDEKKLL------------QAQEEIKKACPNPKFIRFIEYEEIK  161 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~-~Ga~Vvl~~R~~~~l~------------~~~~~l~~~~~~~~~~~~~~~~~~~  161 (475)
                      .-.+|++||||||+|||+++|+.|++ +|++|++++|+.+..+            .+.+++.+.+               
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G---------------  108 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG---------------  108 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT---------------
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC---------------
Confidence            45689999999999999999999999 9999999998765432            2233444433               


Q ss_pred             hcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-------------cCCCc------------
Q psy3252         162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-------------LCGTL------------  216 (475)
Q Consensus       162 ~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-------------~~~~~------------  216 (475)
                               .++..+.+|++ |.++++++++++.++||+||+||||||+.             ...++            
T Consensus       109 ---------~~a~~i~~Dvt-d~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~  178 (405)
T 3zu3_A          109 ---------LYAKSINGDAF-SDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTD  178 (405)
T ss_dssp             ---------CCEEEEESCTT-SHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETT
T ss_pred             ---------CceEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEEcCccccccCcccccccccccccccccccccccccc
Confidence                     46788999999 99999999999999999999999999985             22344            


Q ss_pred             ---------ccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH-HHHHHHHHH-HHhCCCCeEEEeccccccc
Q psy3252         217 ---------EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI-HMTKALVEG-MKQRGRGCIVITASQAANL  285 (475)
Q Consensus       217 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~-~l~~~~lp~-m~~~~~g~IV~iSS~a~~~  285 (475)
                               .+.+.++|+++                     ++||..+.+ ++++++++. |++ +.|+||++||+.+..
T Consensus       179 ~~~~~~~~i~~~t~ee~~~~---------------------v~Vn~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~  236 (405)
T 3zu3_A          179 KEVIKESVLQPATQSEIDST---------------------VAVMGGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKI  236 (405)
T ss_dssp             TTEEEEEEECCCCHHHHHHH---------------------HHHHSSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGG
T ss_pred             ccccccccCCCCCHHHHHHH---------------------HHhhchhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhC
Confidence                     67889999988                     999999998 788887754 544 459999999999999


Q ss_pred             cCCCC--hhhHHHHHHHHHHHHHHHHHHccC-CcEEEEEeCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccc
Q psy3252         286 GIYGL--AAYTSSKFALKGFAEALYMEVKQS-GLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGL  362 (475)
Q Consensus       286 ~~~~~--~~Y~aSKaAl~~l~~sLa~El~~~-gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~  362 (475)
                      +.+.+  ++|++||+|+++|+++||.||+++ |||||+|+||.|.|++................+++|.+.||+++++..
T Consensus       237 ~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~  316 (405)
T 3zu3_A          237 THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVY  316 (405)
T ss_dssp             GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHH
Confidence            99987  999999999999999999999999 999999999999999866554322223334458999999999999877


Q ss_pred             eeee
Q psy3252         363 TITL  366 (475)
Q Consensus       363 ~~~~  366 (475)
                      .++-
T Consensus       317 ~L~s  320 (405)
T 3zu3_A          317 SLYK  320 (405)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7664

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=7e-36  Score=324.39  Aligned_cols=257  Identities=20%  Similarity=0.232  Sum_probs=200.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||+++|++|+++|++|++.+++  .++++.+++.+.+                        .++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g------------------------~~~  371 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAG------------------------GEA  371 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTT------------------------CEE
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcC------------------------CeE
Confidence            47899999999999999999999999999999999874  2455666665543                        456


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ..+.+|++   ++++++++++.++||+||+||||||+....++.+++.++|+++                     |+||+
T Consensus       372 ~~~~~Dv~---~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~---------------------~~vNl  427 (604)
T 2et6_A          372 WPDQHDVA---KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSV---------------------QQVHL  427 (604)
T ss_dssp             EEECCCHH---HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEcChH---HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHHHh
Confidence            67778883   3457788999999999999999999987788999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++|+++|+|++++.|+|||+||.++..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||. .|+|...
T Consensus       428 ~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~  506 (604)
T 2et6_A          428 IGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS  506 (604)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc
Confidence            999999999999999888899999999999999999999999999999999999999999999999999995 9998654


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCC------CcccccccCCCCCCChHHHHHHH
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSK------PRETSLISQTGGLYRPEVVAKQL  407 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~e~vA~~i  407 (475)
                      ....         .....+.||||+.+.  +||+++... ++|-.-.-.-.      .............++||++++..
T Consensus       507 ~~~~---------~~~~~~~pe~vA~~v--~~L~s~~~~-itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  574 (604)
T 2et6_A          507 IMRE---------QDKNLYHADQVAPLL--VYLGTDDVP-VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHL  574 (604)
T ss_dssp             ---------------CCSSCGGGTHHHH--HHTTSTTCC-CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHH
T ss_pred             cCch---------hhccCCCHHHHHHHH--HHHhCCccC-CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHH
Confidence            2111         112457999999875  467777776 76632110000      00000001112357999999876


Q ss_pred             HHHHhc
Q psy3252         408 LEDALK  413 (475)
Q Consensus       408 ~~ai~~  413 (475)
                      -.-...
T Consensus       575 ~~i~~~  580 (604)
T 2et6_A          575 NEITDF  580 (604)
T ss_dssp             HHHTCC
T ss_pred             HHHhcc
Confidence            653333

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=4.5e-35  Score=280.30  Aligned_cols=187  Identities=29%  Similarity=0.403  Sum_probs=165.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ..+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++                            .++.+
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------------------~~~~~   54 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----------------------------EGALP   54 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----------------------------TTCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------------------hhceE
Confidence            35789999999999999999999999999999999988777655433                            13567


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++..                     +++|+.|
T Consensus        55 ~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~~~  112 (234)
T 2ehd_A           55 LPGDVR-EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLV---------------------LDTNLTG  112 (234)
T ss_dssp             EECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHH---------------------HHHHTHH
T ss_pred             EEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHH---------------------HHHHhHH
Confidence            899999 999999999999999999999999999987778888899999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      ++++++.++|.|.+++.|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  189 (234)
T 2ehd_A          113 AFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG  189 (234)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC--------
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc
Confidence            99999999999998888999999999999999999999999999999999999999999999999999999999643

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=6.7e-36  Score=289.23  Aligned_cols=225  Identities=18%  Similarity=0.192  Sum_probs=193.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|++|||||++|||++++++|+++|++|++++|+ .++++++.+++...+                        .++
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------------------------~~~   59 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG------------------------GDA   59 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT------------------------CEE
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC------------------------Cce
Confidence            3678999999999999999999999999999999999 888888877776543                        568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc-ccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM-ALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.+|++ |.++++++++++.++++++|+||||||+ ....++.+.+.++++.+                     +++|
T Consensus        60 ~~~~~D~~-~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~~n  117 (258)
T 3afn_B           60 AFFAADLA-TSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAV---------------------MDAN  117 (258)
T ss_dssp             EEEECCTT-SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHHH
T ss_pred             EEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHH---------------------HHhc
Confidence            89999999 9999999999999999999999999998 55667788889999887                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCC--C---CeEEEeccccccc-cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRG--R---GCIVITASQAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~--~---g~IV~iSS~a~~~-~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      +.|+++++++++|.|.+++  .   ++||++||..+.. +.++...|++||++++.|+++++.|++++||+||+|+||+|
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v  197 (258)
T 3afn_B          118 IRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTV  197 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             cHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCc
Confidence            9999999999999997654  3   8999999999988 88899999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCccccccccccCCCCChHHhhhccceee
Q psy3252         327 DTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       327 ~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .|++................+.+++..|||++++.+.++
T Consensus       198 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  236 (258)
T 3afn_B          198 DTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFA  236 (258)
T ss_dssp             SSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHH
T ss_pred             ccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHh
Confidence            999765431110011112246788999999999866543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=3.8e-35  Score=287.54  Aligned_cols=235  Identities=21%  Similarity=0.284  Sum_probs=196.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...                         .+
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------------------~~   65 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-------------------------DV   65 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-------------------------TT
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-------------------------Cc
Confidence            35678999999999999999999999999999999999988777666554210                         35


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC--CCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      +.++.+|++ |.++++++++++.++++++|+||||||+...  .++.+.+.++++.+                     ++
T Consensus        66 ~~~~~~D~~-~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~---------------------~~  123 (278)
T 2bgk_A           66 ISFVHCDVT-KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRV---------------------MD  123 (278)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHH---------------------HH
T ss_pred             eEEEECCCC-CHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHH---------------------HH
Confidence            788999999 9999999999999999999999999998643  56778888999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC-CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY-GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|+++++++++|.|.+++.|+||++||..+..+.+ +...|++||+++++|+++++.|++++||+|++|+||+|.|+
T Consensus       124 ~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (278)
T 2bgk_A          124 INVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASP  203 (278)
T ss_dssp             HHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCC
T ss_pred             HhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecch
Confidence            99999999999999999988889999999999998888 78899999999999999999999999999999999999999


Q ss_pred             CCcccccCCcccc-----ccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         330 GFENEEKSKPRET-----SLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       330 ~~~~~~~~~~~~~-----~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +........+...     ....+.+++..|||+|++.+.+  +.+....++|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~~~~~~~G  253 (278)
T 2bgk_A          204 LLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL--AGDESKYVSG  253 (278)
T ss_dssp             CCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHH--HSGGGTTCCS
T ss_pred             hhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHH--cCcccccCCC
Confidence            8765432111110     0112457899999999986554  3333334443

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-35  Score=291.47  Aligned_cols=240  Identities=20%  Similarity=0.239  Sum_probs=198.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ...+++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++......                   ....+
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-------------------~~~~~   73 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP-------------------TKQAR   73 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT-------------------TCCCC
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc-------------------cCCcc
Confidence            34678999999999999999999999999999999999999998888888763210                   00156


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++++.+.+|++|+||||||+....++.+.+.++++.+                     +++|
T Consensus        74 ~~~~~~D~~-~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N  131 (303)
T 1yxm_A           74 VIPIQCNIR-NEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV---------------------LETN  131 (303)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHH
T ss_pred             EEEEecCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHH---------------------HHHH
Confidence            889999999 999999999999999999999999999877677888899999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|+++++++++|.+.+++.|+||++||.+ ..+.++...|++||+++.+|+++++.|++++||+||+|+||+|+|++..
T Consensus       132 ~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  210 (303)
T 1yxm_A          132 LTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAV  210 (303)
T ss_dssp             THHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGG
T ss_pred             hHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhh
Confidence            999999999999976655569999999998 7788889999999999999999999999999999999999999999532


Q ss_pred             -cccc-CCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         333 -NEEK-SKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       333 -~~~~-~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                       .... ...  .......+.++++.|||+|++.+.+  +.+...+++|
T Consensus       211 ~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l--~~~~~~~~~G  256 (303)
T 1yxm_A          211 ENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFL--LSPAASFITG  256 (303)
T ss_dssp             TTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHH--HSGGGTTCCS
T ss_pred             hhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHH--hCcccccCCC
Confidence             2111 011  1111224678999999999987654  4444444444

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.2e-36  Score=293.87  Aligned_cols=223  Identities=16%  Similarity=0.127  Sum_probs=184.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+ +...+.                        ++..+  
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~------------------------~~~~~--   54 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYP------------------------QLKPM--   54 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCT------------------------TSEEC--
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCC------------------------cEEEE--
Confidence            689999999999999999999999999999999888877665 655432                        22222  


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      |.    ++++++++++.+++|++|+||||||+. ...++.+.+.++++.+                     +++|+.|++
T Consensus        55 d~----~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~N~~g~~  109 (254)
T 1zmt_A           55 SE----QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGA---------------------VEALQIRPF  109 (254)
T ss_dssp             CC----CSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHH---------------------HHHHTHHHH
T ss_pred             CH----HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHH---------------------HHHHhHHHH
Confidence            43    457888999999999999999999998 6678889999999988                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC---------CC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT---------DT  328 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v---------~T  328 (475)
                      +++++++|.|++++.|+||++||..+..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|         +|
T Consensus       110 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T  189 (254)
T 1zmt_A          110 ALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPT  189 (254)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBH
T ss_pred             HHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCC
Confidence            999999999998888999999999999999999999999999999999999999999999999999999         66


Q ss_pred             CCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         329 PGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++...... .........+++|++.|||+|++.+  +++++...+++|
T Consensus       190 ~~~~~~~~-~~~~~~~~~p~~~~~~p~dvA~~v~--~l~s~~~~~~tG  234 (254)
T 1zmt_A          190 EPWKTNPE-HVAHVKKVTALQRLGTQKELGELVA--FLASGSCDYLTG  234 (254)
T ss_dssp             HHHTTCHH-HHHHHHHHSSSSSCBCHHHHHHHHH--HHHTTSCGGGTT
T ss_pred             cccccChH-HHHHHhccCCCCCCcCHHHHHHHHH--HHhCcccCCccC
Confidence            65432110 0001112347789999999999865  455655555555

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1e-35  Score=286.01  Aligned_cols=222  Identities=25%  Similarity=0.284  Sum_probs=191.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE-
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY-  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-  175 (475)
                      +|++|||||++|||+++|++|+++|++|+++ +|+.++++++.+++...+                        .++.. 
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~------------------------~~~~~~   56 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG------------------------SPLVAV   56 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------CSCEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------------------------CceEEE
Confidence            4799999999999999999999999999998 899988888877776543                        23455 


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++++.+.++++|+||||||+....++.+.+.++++.+                     +++|+.|
T Consensus        57 ~~~D~~-~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~g  114 (245)
T 2ph3_A           57 LGANLL-EAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAV---------------------LEANLSA  114 (245)
T ss_dssp             EECCTT-SHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHTHH
T ss_pred             EeccCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHH---------------------HhhccHH
Confidence            899999 999999999999999999999999999987777888899999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      ++++++.++|.|.+++.++||++||..+..+.++...|++||+++++++++++.|+.++||+|++|+||+++|++.....
T Consensus       115 ~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  194 (245)
T 2ph3_A          115 VFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP  194 (245)
T ss_dssp             HHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC
Confidence            99999999999998878999999999999899999999999999999999999999999999999999999999765422


Q ss_pred             cCCccccccccccCCCCChHHhhhccceee
Q psy3252         336 KSKPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ...........+.+++..|+|++++.+.++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  224 (245)
T 2ph3_A          195 QEVKEAYLKQIPAGRFGRPEEVAEAVAFLV  224 (245)
T ss_dssp             HHHHHHHHHTCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            111011111236678999999999876543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=3.5e-35  Score=296.34  Aligned_cols=195  Identities=28%  Similarity=0.367  Sum_probs=164.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++|++|||||++|||+++|++|+++|++|++++|+...++++.+.+......                  .....++.++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~   62 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL------------------ACPPGSLETL   62 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT------------------TCCTTSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc------------------cCCCCceEEE
Confidence            3789999999999999999999999999998887755544443333221100                  0001468899


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.++++++++++  .++++|+||||||+....++.+.+.++++.+                     +++|+.|+
T Consensus        63 ~~Dv~-d~~~v~~~~~~~--~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~---------------------~~vN~~g~  118 (327)
T 1jtv_A           63 QLDVR-DSKSVAAARERV--TEGRVDVLVCNAGLGLLGPLEALGEDAVASV---------------------LDVNVVGT  118 (327)
T ss_dssp             ECCTT-CHHHHHHHHHTC--TTSCCSEEEECCCCCCCSCGGGSCHHHHHHH---------------------HHHHTHHH
T ss_pred             EecCC-CHHHHHHHHHHH--hcCCCCEEEECCCcCCCCchhhCCHHHHHHH---------------------HHHHhHHH
Confidence            99999 999999999988  3589999999999987778888999999988                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      ++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       119 ~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~  195 (327)
T 1jtv_A          119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK  195 (327)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             HHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhh
Confidence            99999999999987889999999999999999999999999999999999999999999999999999999998654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.8e-36  Score=289.02  Aligned_cols=186  Identities=23%  Similarity=0.335  Sum_probs=138.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+++||++|||||++|||+++|++|++ |++|++++|+.+.++++.+    .                         ..+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~-------------------------~~~   50 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----I-------------------------EGV   50 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----S-------------------------TTE
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----h-------------------------cCC
Confidence            357899999999999999999999988 9999999999887765542    1                         347


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.++ ...+.+..++++++|+||||||+....++.+.+.++++.+                     +++|+
T Consensus        51 ~~~~~D~~-~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  107 (245)
T 3e9n_A           51 EPIESDIV-KEVL-EEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAH---------------------LDLNV  107 (245)
T ss_dssp             EEEECCHH-HHHH-TSSSCGGGTTCSCCSEEEECC----------CHHHHHHHH---------------------HHHHT
T ss_pred             cceecccc-hHHH-HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHH---------------------HHHHh
Confidence            78999999 7665 4455556677899999999999988788888889999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++++++|.|++++ |+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...
T Consensus       108 ~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  186 (245)
T 3e9n_A          108 IVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG  186 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred             HHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh
Confidence            999999999999998765 9999999999999999999999999999999999999999999999999999999997654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=6.5e-35  Score=280.71  Aligned_cols=218  Identities=26%  Similarity=0.299  Sum_probs=184.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++||++|||||++|||++++++|+++|++|++++|+.++++++.+++.                            .+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------------------~~   54 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------------------------GI   54 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----------------------------TC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----------------------------CC
Confidence            56789999999999999999999999999999999999887776554321                            13


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++    .++++|+||||||+....++.+.+.++++..                     +++|+
T Consensus        55 ~~~~~D~~-~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  108 (244)
T 3d3w_A           55 EPVCVDLG-DWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRS---------------------FEVNL  108 (244)
T ss_dssp             EEEECCTT-CHHHHHHHHT----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             CEEEEeCC-CHHHHHHHHH----HcCCCCEEEECCccCCCcchhhCCHHHHHHH---------------------HHHHh
Confidence            45699999 9998888776    5789999999999887777888899999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .+++++++++++.|.+++ .|+||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+|.|++..
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~  188 (244)
T 3d3w_A          109 RAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchh
Confidence            999999999999998876 7999999999999998999999999999999999999999999999999999999999765


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceee
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ........  ......+.+++..|+|++++.+.++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (244)
T 3d3w_A          189 ATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             hhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHc
Confidence            32211111  1112346788999999999866543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.7e-35  Score=296.31  Aligned_cols=214  Identities=24%  Similarity=0.335  Sum_probs=185.6

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE---------ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhh
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV---------ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK  162 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~---------~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~  162 (475)
                      ..++++||++|||||++|||+++|++|+++|++|+++         +|+.++++++.+++...+.               
T Consensus         3 ~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---------------   67 (319)
T 1gz6_A            3 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---------------   67 (319)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---------------
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---------------
Confidence            3467889999999999999999999999999999996         4577888888888866431               


Q ss_pred             cCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhc
Q psy3252         163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLAL  242 (475)
Q Consensus       163 ~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (475)
                               .   ..+|++ +.++++++++++.+.++++|+||||||+....++.+.+.++++.+               
T Consensus        68 ---------~---~~~D~~-~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~---------------  119 (319)
T 1gz6_A           68 ---------K---AVANYD-SVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDII---------------  119 (319)
T ss_dssp             ---------E---EEEECC-CGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------
T ss_pred             ---------e---EEEeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------
Confidence                     2   358999 999999999999999999999999999987777888999999988               


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         243 WRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       243 ~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                            +++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+
T Consensus       120 ------~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~  193 (319)
T 1gz6_A          120 ------QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIA  193 (319)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEE
T ss_pred             ------HHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEe
Confidence                  99999999999999999999888899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCccccccccccCCCCChHHhhhcccee
Q psy3252         323 PPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTI  364 (475)
Q Consensus       323 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~  364 (475)
                      ||.+ |++......   .      ...+...||+++++.+.+
T Consensus       194 PG~~-t~~~~~~~~---~------~~~~~~~p~dvA~~~~~l  225 (319)
T 1gz6_A          194 PNAG-SRMTETVMP---E------DLVEALKPEYVAPLVLWL  225 (319)
T ss_dssp             EECC-STTTGGGSC---H------HHHHHSCGGGTHHHHHHH
T ss_pred             CCCc-cccccccCC---h------hhhccCCHHHHHHHHHHH
Confidence            9998 887543211   0      011246899999876553

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-35  Score=285.52  Aligned_cols=223  Identities=26%  Similarity=0.318  Sum_probs=179.6

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +....++||++|||||++|||+++|++|+++|++|++++|+.+.+++    +                            
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~----------------------------   59 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S----------------------------   59 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T----------------------------
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh----h----------------------------
Confidence            34567889999999999999999999999999999999999733221    1                            


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ..+.++ +|+.   ++++++++++    .++|+||||||+....++.+.+.++++.+                     ++
T Consensus        60 ~~~~~~-~D~~---~~~~~~~~~~----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~---------------------~~  110 (249)
T 1o5i_A           60 GHRYVV-CDLR---KDLDLLFEKV----KEVDILVLNAGGPKAGFFDELTNEDFKEA---------------------ID  110 (249)
T ss_dssp             CSEEEE-CCTT---TCHHHHHHHS----CCCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HH
T ss_pred             CCeEEE-eeHH---HHHHHHHHHh----cCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HH
Confidence            124566 9994   3456665544    38999999999887778888999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|++++++.++|.|++++.|+||++||.++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++
T Consensus       111 ~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  190 (249)
T 1o5i_A          111 SLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER  190 (249)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             HHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence            99999999999999999988889999999999999999999999999999999999999999999999999999999998


Q ss_pred             CcccccCCcc-ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSKPR-ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~~-~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      .......... ......++++++.|||+|++.+.  ++.+....++|
T Consensus       191 ~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~--l~s~~~~~~tG  235 (249)
T 1o5i_A          191 VKELLSEEKKKQVESQIPMRRMAKPEEIASVVAF--LCSEKASYLTG  235 (249)
T ss_dssp             HHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHH--HHSGGGTTCCS
T ss_pred             ccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHH--HcCccccCCCC
Confidence            6532211101 11123477899999999998654  44554455554

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-35  Score=284.53  Aligned_cols=225  Identities=23%  Similarity=0.305  Sum_probs=193.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .+++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++...+                        .
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~------------------------~   71 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG------------------------A   71 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------C
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC------------------------C
Confidence            35678999999999999999999999999999999999 8888888777776543                        4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.++++++++++.++++++|+||||||+....++.+.+.++++.+                     +++
T Consensus        72 ~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~  129 (274)
T 1ja9_A           72 QGVAIQADIS-KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKV---------------------FNL  129 (274)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             cEEEEEecCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHH---------------------HHH
Confidence            6788999999 999999999999999999999999999987777888899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      |+.|++++++++++.|.+ + |+||++||..+. .+.++...|++||++++.|+++++.|++++||+|++|+||.|.|++
T Consensus       130 n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  207 (274)
T 1ja9_A          130 NTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  207 (274)
T ss_dssp             HTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             HHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            999999999999999973 3 899999999998 7888899999999999999999999999999999999999999997


Q ss_pred             Cccccc--------CCc--cc---cccccccCCCCChHHhhhccceee
Q psy3252         331 FENEEK--------SKP--RE---TSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       331 ~~~~~~--------~~~--~~---~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ......        ...  ..   .....+.+++..|+|++++.+.++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  255 (274)
T 1ja9_A          208 FDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC  255 (274)
T ss_dssp             HHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             hhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            652110        000  10   111246788999999999865543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-35  Score=284.02  Aligned_cols=179  Identities=18%  Similarity=0.159  Sum_probs=161.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      |++|++|||||++|||+++|++|+++|++|++++|+.++++                                  ....+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------------------------------~~~~~   46 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------------------------------DSNIL   46 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------------------------------SEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------------------------------cccEE
Confidence            35789999999999999999999999999999999865321                                  23467


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhc--CCccEEEEccccccCCCc-ccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         176 VSLDISKDYENIRSALQPAMDRC--GPVYMLVNCAGMALCGTL-EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~--g~IDvLVnnAG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.+|++ |.++++++++++.+.+  +++|+||||||+....++ .+.+.++++.+                     +++|
T Consensus        47 ~~~D~~-~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~~N  104 (236)
T 1ooe_A           47 VDGNKN-WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLM---------------------IKQS  104 (236)
T ss_dssp             CCTTSC-HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHH---------------------HHHH
T ss_pred             EeCCCC-CHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            889999 9999999999999999  799999999998876666 67778888877                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v~T~~  330 (475)
                      +.|+++++++++|.|.+  .|+||++||.++..+.++...|++||+|+++|+++|+.|++  ++||+||+|+||+|+|++
T Consensus       105 ~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  182 (236)
T 1ooe_A          105 VWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  182 (236)
T ss_dssp             HHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             hHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence            99999999999999975  48999999999999999999999999999999999999998  999999999999999996


Q ss_pred             Cc
Q psy3252         331 FE  332 (475)
Q Consensus       331 ~~  332 (475)
                      ..
T Consensus       183 ~~  184 (236)
T 1ooe_A          183 NR  184 (236)
T ss_dssp             HH
T ss_pred             hh
Confidence            43

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=4.9e-35  Score=284.00  Aligned_cols=182  Identities=24%  Similarity=0.215  Sum_probs=159.4

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ++..+..+|++|||||++|||+++|++|+++|++|++++|+.++++                                  
T Consensus        15 ~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------------------------------   60 (251)
T 3orf_A           15 VPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA----------------------------------   60 (251)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS----------------------------------
T ss_pred             cccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------------------------------
Confidence            3445566899999999999999999999999999999999875321                                  


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC-cccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                        ...+.+|++ |.++++++++++.++++++|+||||||+..... +.+.+.++++.+                     +
T Consensus        61 --~~~~~~d~~-d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~---------------------~  116 (251)
T 3orf_A           61 --DHSFTIKDS-GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGM---------------------I  116 (251)
T ss_dssp             --SEEEECSCS-SHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHH---------------------H
T ss_pred             --ccceEEEeC-CHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHH---------------------H
Confidence              124789999 999999999999999999999999999876654 667778888887                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTD  327 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v~  327 (475)
                      ++|+.|+++++++++|.|++  .|+||++||..+..+.++...|++||+|+++|+++++.|++  ++||+||+|+||+|+
T Consensus       117 ~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~  194 (251)
T 3orf_A          117 DMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLD  194 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBC
T ss_pred             HHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCc
Confidence            99999999999999999976  48999999999999999999999999999999999999987  899999999999999


Q ss_pred             CCCCc
Q psy3252         328 TPGFE  332 (475)
Q Consensus       328 T~~~~  332 (475)
                      |++..
T Consensus       195 t~~~~  199 (251)
T 3orf_A          195 TPTNR  199 (251)
T ss_dssp             CHHHH
T ss_pred             Ccchh
Confidence            99644

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.3e-35  Score=297.96  Aligned_cols=236  Identities=16%  Similarity=0.133  Sum_probs=154.2

Q ss_pred             CCCCCCEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCh-----------hHHHH-----------HHHHHHHhCCCC
Q psy3252          94 LAPTNGTLSVTGG--SSGIGKHVAIEAAKRGAHVTIVARDE-----------KKLLQ-----------AQEEIKKACPNP  149 (475)
Q Consensus        94 ~~l~gk~vLITGa--s~GIG~aiA~~La~~Ga~Vvl~~R~~-----------~~l~~-----------~~~~l~~~~~~~  149 (475)
                      ++++||++|||||  ++|||+++|++|+++|++|++++|+.           +++++           +.+++.+.+.. 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   83 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD-   83 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc-
Confidence            4578999999999  89999999999999999999998753           22221           11112111000 


Q ss_pred             cchhhhhHHHhhhcCCCCCccceEEEEE------------eecCCC--------HHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         150 KFIRFIEYEEIKKACPNPKFIRFIEYVS------------LDISKD--------YENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~------------~Dvt~d--------~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                                          .....++.            +|++ |        .++++++++++.+++|+||+||||||
T Consensus        84 --------------------~~~~~~~~~d~~~~~~~~~~~Dv~-~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg  142 (319)
T 2ptg_A           84 --------------------LVFDKIYPLDAVFDTPQDVPPEVS-SNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLA  142 (319)
T ss_dssp             ---------------------CCSEEEECCTTCCSGGGSCHHHH-CC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEE
T ss_pred             --------------------ccccccccccccccccccccchhc-ccccccccCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence                                00012333            3444 3        45799999999999999999999999


Q ss_pred             ccc--CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC
Q psy3252         210 MAL--CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI  287 (475)
Q Consensus       210 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~  287 (475)
                      +..  ..++.+.+.++|+.+                     +++|+.|+++++++++|.|.+.  |+||++||.++..+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~---------------------~~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~  199 (319)
T 2ptg_A          143 NGPEVTKPLLQTSRKGYLAA---------------------VSSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVI  199 (319)
T ss_dssp             CCSSSSSCGGGCCHHHHHHH---------------------HHHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC-----
T ss_pred             cCCCCCCccccCCHHHHHHH---------------------HhHhhHHHHHHHHHHHHHHhcC--ceEEEEecccccccc
Confidence            863  567888999999988                     9999999999999999999763  899999999999888


Q ss_pred             CCC-hhhHHHHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCCCCCCCcccccCCc-----c---ccccccccCCCCChHHh
Q psy3252         288 YGL-AAYTSSKFALKGFAEALYMEVKQ-SGLTITLCLPPDTDTPGFENEEKSKP-----R---ETSLISQTGGLYRPEVV  357 (475)
Q Consensus       288 ~~~-~~Y~aSKaAl~~l~~sLa~El~~-~gIrVn~V~PG~v~T~~~~~~~~~~~-----~---~~~~~~~~~~~~~pe~v  357 (475)
                      ++. ..|++||+|+++|+++|+.|+++ +||+||+|+||+|+|+|.........     .   ......|++|+++|||+
T Consensus       200 ~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peev  279 (319)
T 2ptg_A          200 PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDV  279 (319)
T ss_dssp             -------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------------CCCHHHH
T ss_pred             CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHH
Confidence            887 69999999999999999999996 89999999999999998764321100     0   00123478899999999


Q ss_pred             hhccceeeecCCCCCCCCC
Q psy3252         358 KQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       358 a~~~~~~~~~~~~~~~~~g  376 (475)
                      |++.+  |++++...+++|
T Consensus       280 A~~v~--~L~s~~~~~itG  296 (319)
T 2ptg_A          280 GRAAL--FLLSPLARAVTG  296 (319)
T ss_dssp             HHHHH--HHTSGGGTTCCS
T ss_pred             HHHHH--HHhCcccCCccC
Confidence            99865  566666667666

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=3.5e-35  Score=283.03  Aligned_cols=179  Identities=18%  Similarity=0.162  Sum_probs=161.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .++|++|||||++|||+++|++|+++|++|++++|+.++++                                  ....+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------------------------~~~~~   50 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------------------------------SASVI   50 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------------------------------SEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------------------------------CCcEE
Confidence            46899999999999999999999999999999999865321                                  23467


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhc--CCccEEEEccccccCCCc-ccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         176 VSLDISKDYENIRSALQPAMDRC--GPVYMLVNCAGMALCGTL-EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~--g~IDvLVnnAG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.+|++ |.++++++++++.+++  +++|+||||||+....++ .+.+.++++.+                     +++|
T Consensus        51 ~~~D~~-~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~~N  108 (241)
T 1dhr_A           51 VKMTDS-FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLM---------------------WKQS  108 (241)
T ss_dssp             CCCCSC-HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHH---------------------HHHH
T ss_pred             EEcCCC-CHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHH---------------------HHHh
Confidence            899999 9999999999999999  799999999998876666 67788888887                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v~T~~  330 (475)
                      +.++++++++++|.|.+  .|+||++||.++..+.++...|++||+|+++|+++|+.|++  ++||+||+|+||+|+|++
T Consensus       109 ~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~  186 (241)
T 1dhr_A          109 IWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  186 (241)
T ss_dssp             HHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             hHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc
Confidence            99999999999999975  38999999999999999999999999999999999999999  999999999999999996


Q ss_pred             Cc
Q psy3252         331 FE  332 (475)
Q Consensus       331 ~~  332 (475)
                      ..
T Consensus       187 ~~  188 (241)
T 1dhr_A          187 NR  188 (241)
T ss_dssp             HH
T ss_pred             cc
Confidence            43

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4e-34  Score=274.87  Aligned_cols=187  Identities=22%  Similarity=0.296  Sum_probs=164.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |++|++|||||++|||+++|++|+++|  ++|++++|+.++++++.+ +  .+                        .++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~------------------------~~~   53 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KD------------------------SRV   53 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CC------------------------TTE
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cC------------------------Cce
Confidence            357899999999999999999999999  999999999887654422 1  01                        468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcC--CccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCG--PVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g--~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.+|++ |.++++++++++.+++|  ++|+||||||+.. ..++.+.+.++++..                     ++
T Consensus        54 ~~~~~D~~-~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~---------------------~~  111 (250)
T 1yo6_A           54 HVLPLTVT-CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQ---------------------LD  111 (250)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHH---------------------HH
T ss_pred             EEEEeecC-CHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHH---------------------HH
Confidence            89999999 99999999999999998  9999999999987 677788889999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhC------C-----CCeEEEeccccccccC-------CCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         251 LNLYGTIHMTKALVEGMKQR------G-----RGCIVITASQAANLGI-------YGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~------~-----~g~IV~iSS~a~~~~~-------~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                      +|+.|+++++++++|.|.++      +     .++||++||..+..+.       ++...|++||+++++|+++++.|++
T Consensus       112 ~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  191 (250)
T 1yo6_A          112 VNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK  191 (250)
T ss_dssp             HHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG
T ss_pred             HhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999876      5     7999999999988776       5778999999999999999999999


Q ss_pred             cCCcEEEEEeCCCCCCCCC
Q psy3252         313 QSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       313 ~~gIrVn~V~PG~v~T~~~  331 (475)
                      ++||+|++|+||+|+|++.
T Consensus       192 ~~gi~v~~v~Pg~v~t~~~  210 (250)
T 1yo6_A          192 DDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             GGTCEEEEEECCCC-----
T ss_pred             cCCeEEEEEcCCceecCCC
Confidence            9999999999999999964

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=4.4e-35  Score=279.04  Aligned_cols=199  Identities=19%  Similarity=0.247  Sum_probs=170.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+                                       
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------------------------   41 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------------------------   41 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------------------------
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------------------------
Confidence            35678999999999999999999999999999999998641                                       


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                           +|++ |.++++++++++    +++|+||||||+. ...++.+.+.++++.+                     +++
T Consensus        42 -----~D~~-~~~~v~~~~~~~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~---------------------~~~   90 (223)
T 3uce_A           42 -----LDIS-DEKSVYHYFETI----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYA---------------------FDT   90 (223)
T ss_dssp             -----CCTT-CHHHHHHHHHHH----CSEEEEEECCCCCCCCSCTTTSCHHHHHHH---------------------HHH
T ss_pred             -----cCCC-CHHHHHHHHHHh----CCCCEEEECCCCCCCCCCcccCCHHHHHhh---------------------hee
Confidence                 6999 999999888754    8999999999987 5578889999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++++++|.|++  .|+||++||..+..+.++...|++||+|+++|+++|+.|+++  |+||+|+||+|+|++.
T Consensus        91 N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~  166 (223)
T 3uce_A           91 KFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAY  166 (223)
T ss_dssp             HHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGG
T ss_pred             eeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhh
Confidence            999999999999999976  389999999999999999999999999999999999999988  9999999999999987


Q ss_pred             cccccCCcc----ccccccccCCCCChHHhhhccceee
Q psy3252         332 ENEEKSKPR----ETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       332 ~~~~~~~~~----~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      .........    ......+.+|+..|||+|++.+.+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~  204 (223)
T 3uce_A          167 KGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAI  204 (223)
T ss_dssp             TTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH
T ss_pred             hhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHc
Confidence            654332211    1122357899999999998865544

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-34  Score=283.82  Aligned_cols=218  Identities=21%  Similarity=0.315  Sum_probs=179.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+...                      ..++.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------------------~~~~~~   62 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE----------------------PQKTLF   62 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC----------------------GGGEEE
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC----------------------CCceEE
Confidence            5789999999999999999999999999999999999888777766643211                      146888


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++++++.+.+++|++|+||||||+..        .++++..                     +++|+.|
T Consensus        63 ~~~D~~-~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~--------~~~~~~~---------------------~~~n~~~  112 (267)
T 2gdz_A           63 IQCDVA-DQQQLRDTFRKVVDHFGRLDILVNNAGVNN--------EKNWEKT---------------------LQINLVS  112 (267)
T ss_dssp             EECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCC--------SSSHHHH---------------------HHHHTHH
T ss_pred             EecCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCC--------hhhHHHH---------------------HhHHHHH
Confidence            999999 999999999999999999999999999752        2445655                     9999999


Q ss_pred             HHHHHHHHHHHHHhCC---CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHH--HHHHccCCcEEEEEeCCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRG---RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEAL--YMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sL--a~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++.+++.++|.|.+++   .|+||++||.++..+.++...|++||+|+++|++++  +.|++++||+||+|+||+|+|++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~  192 (267)
T 2gdz_A          113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  192 (267)
T ss_dssp             HHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             HHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence            9999999999998753   589999999999999999999999999999999995  68999999999999999999997


Q ss_pred             CcccccCCcc------cccc--ccccCCCCChHHhhhccceee
Q psy3252         331 FENEEKSKPR------ETSL--ISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       331 ~~~~~~~~~~------~~~~--~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ..........      ....  ..+..+...|||+|++.+.+.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~  235 (267)
T 2gdz_A          193 LESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  235 (267)
T ss_dssp             HHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             hhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHh
Confidence            5532211000      0001  112345789999999876543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-34  Score=276.66  Aligned_cols=194  Identities=18%  Similarity=0.201  Sum_probs=168.5

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcC---CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCC
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRG---AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNP  167 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~G---a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
                      +...++++|++|||||++|||+++|++|+++|   ++|++++|+.++++.+ +++...+                     
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~---------------------   71 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNH---------------------   71 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHC---------------------
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccC---------------------
Confidence            44566789999999999999999999999999   9999999998766543 3343332                     


Q ss_pred             CccceEEEEEeecCCCHHHHHHHHHHHHHhcC--CccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccc
Q psy3252         168 KFIRFIEYVSLDISKDYENIRSALQPAMDRCG--PVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWR  244 (475)
Q Consensus       168 ~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g--~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (475)
                         .++.++.+|++ |.++++++++++.+.++  ++|+||||||+.. ..++.+.+.++++.+                 
T Consensus        72 ---~~~~~~~~Dl~-~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~-----------------  130 (267)
T 1sny_A           72 ---SNIHILEIDLR-NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDT-----------------  130 (267)
T ss_dssp             ---TTEEEEECCTT-CGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHH-----------------
T ss_pred             ---CceEEEEecCC-ChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHH-----------------
Confidence               46889999999 99999999999999998  8999999999987 677888899999988                 


Q ss_pred             cchhhhhhHHHHHHHHHHHHHHHHhC------C-----CCeEEEeccccccccCC---CChhhHHHHHHHHHHHHHHHHH
Q psy3252         245 SWTVIDLNLYGTIHMTKALVEGMKQR------G-----RGCIVITASQAANLGIY---GLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       245 ~~~v~~vN~~g~~~l~~~~lp~m~~~------~-----~g~IV~iSS~a~~~~~~---~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                          +++|+.|+++++++++|.|.++      +     .|+||++||..+..+.+   +...|++||+++++|+++++.|
T Consensus       131 ----~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  206 (267)
T 1sny_A          131 ----LQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVD  206 (267)
T ss_dssp             ----HHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----HhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence                9999999999999999999876      3     58999999999887653   7789999999999999999999


Q ss_pred             HccCCcEEEEEeCCCCCCCCC
Q psy3252         311 VKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~T~~~  331 (475)
                      ++++||+|++|+||+|+|++.
T Consensus       207 ~~~~gi~v~~v~Pg~v~t~~~  227 (267)
T 1sny_A          207 LYPQRIMCVSLHPGWVKTDMG  227 (267)
T ss_dssp             HGGGTCEEEEECCCSBCSTTT
T ss_pred             hhcCCcEEEEeCCcceecCCC
Confidence            999999999999999999964

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=5.8e-35  Score=289.44  Aligned_cols=217  Identities=23%  Similarity=0.246  Sum_probs=170.1

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .++++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   .                        
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------   61 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---A------------------------   61 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---S------------------------
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c------------------------
Confidence            4567889999999999999999999999999999999999998887765543   1                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.++++++++++    +++|+||||||+...  ..+.+.++++.+                     ++
T Consensus        62 ~~~~~~~~Dl~-d~~~v~~~~~~~----~~iD~lv~nAg~~~~--~~~~~~~~~~~~---------------------~~  113 (291)
T 3rd5_A           62 GQVEVRELDLQ-DLSSVRRFADGV----SGADVLINNAGIMAV--PYALTVDGFESQ---------------------IG  113 (291)
T ss_dssp             SEEEEEECCTT-CHHHHHHHHHTC----CCEEEEEECCCCCSC--CCCBCTTSCBHH---------------------HH
T ss_pred             CCeeEEEcCCC-CHHHHHHHHHhc----CCCCEEEECCcCCCC--cccCCHHHHHHH---------------------HH
Confidence            57899999999 999999888765    799999999998643  344566666655                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc-------------CCCChhhHHHHHHHHHHHHHHHHHHccCC--
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG-------------IYGLAAYTSSKFALKGFAEALYMEVKQSG--  315 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~g--  315 (475)
                      +|+.|+++++++++|.|.+    +||++||.++..+             .++...|++||+|+++|+++|+.|++++|  
T Consensus       114 vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~  189 (291)
T 3rd5_A          114 TNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSP  189 (291)
T ss_dssp             HHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            9999999999999999975    6999999988765             34457899999999999999999999988  


Q ss_pred             cEEEEEeCCCCCCCCCcccccCCccccccccccCCCCC-hHHhhhccceeeec
Q psy3252         316 LTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYR-PEVVKQSGLTITLC  367 (475)
Q Consensus       316 IrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-pe~va~~~~~~~~~  367 (475)
                      |+||+|+||+|+|++......... ......+.++.+. |||+|++.+.+...
T Consensus       190 i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~A~~~~~l~~~  241 (291)
T 3rd5_A          190 LRALAAHPGYSHTNLQGASGRKLG-DALMSAATRVVATDADFGARQTLYAASQ  241 (291)
T ss_dssp             CEEEEECCSGGGSCC---------------------CHHHHHHHHHHHHHHHS
T ss_pred             EEEEEeeCCCCccccccccchHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHcC
Confidence            999999999999998876532221 1112245667776 99999887665443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=9.1e-35  Score=316.50  Aligned_cols=225  Identities=24%  Similarity=0.316  Sum_probs=176.2

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEec---------ChhHHHHHHHHHHHhCCCCcchhhhhHHHh
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR---------DEKKLLQAQEEIKKACPNPKFIRFIEYEEI  160 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R---------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  160 (475)
                      ....++++||++|||||++|||+++|++|+++|++|++++|         +.+.++++.+++.+.+.             
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-------------   77 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-------------   77 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-------------
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-------------
Confidence            34557899999999999999999999999999999999988         77778888888876542             


Q ss_pred             hhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchh
Q psy3252         161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRL  240 (475)
Q Consensus       161 ~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (475)
                                 .   ..+|++ |.++++++++++.+++|+||+||||||+....++.+.+.++|+.+             
T Consensus        78 -----------~---~~~D~~-d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~-------------  129 (613)
T 3oml_A           78 -----------E---AVADYN-SVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLV-------------  129 (613)
T ss_dssp             -----------C---EEECCC-CGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHH-------------
T ss_pred             -----------e---EEEEeC-CHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHH-------------
Confidence                       1   348999 999999999999999999999999999998888899999999988             


Q ss_pred             hccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         241 ALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       241 ~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                              +++|+.|+++++++++|.|++++.|+||++||.++..+.++...|++||+|+.+|+++|+.|++++||+||+
T Consensus       130 --------~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~  201 (613)
T 3oml_A          130 --------NDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNV  201 (613)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence                    999999999999999999999988999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         321 CLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       321 V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+||.+ |+|.......         ...+...||++|++.+  +|+++. .+++|
T Consensus       202 v~Pg~~-t~~~~~~~~~---------~~~~~~~pedvA~~v~--~L~s~~-~~~tG  244 (613)
T 3oml_A          202 IVPTAA-SRMTEGILPD---------ILFNELKPKLIAPVVA--YLCHES-CEDNG  244 (613)
T ss_dssp             EEEC-------CCCCCH---------HHHTTCCGGGTHHHHH--HTTSTT-CCCCS
T ss_pred             EECCCC-Chhhhhccch---------hhhhcCCHHHHHHHHH--HhcCCC-cCCCc
Confidence            999975 6665433211         1234569999998754  566666 55555

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.3e-35  Score=291.88  Aligned_cols=246  Identities=14%  Similarity=0.128  Sum_probs=181.8

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          94 LAPTNGTLSVTGGS--SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        94 ~~l~gk~vLITGas--~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+...- ...+........          .. ..........
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~----------~~-~~~~~~~~~~   71 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALN-IFETSLRRGKFD----------QS-RVLPDGSLME   71 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHH-HHHHHHHTTTTT----------GG-GBCTTSSBCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccch-hhhhhhhhhHhh----------hh-hhhccccccc
Confidence            56789999999999  9999999999999999999999864211 100001000000          00 0000000001


Q ss_pred             eEEEEEee--------cCC---C--------HHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhhhh
Q psy3252         172 FIEYVSLD--------ISK---D--------YENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVMEQP  230 (475)
Q Consensus       172 ~v~~~~~D--------vt~---d--------~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~~~  230 (475)
                      ....+.+|        ++.   |        .++++++++++.+++|++|+||||||+..  ..++.+.+.++|+.+   
T Consensus        72 ~~~~~~~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~---  148 (297)
T 1d7o_A           72 IKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAA---  148 (297)
T ss_dssp             EEEEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHH---
T ss_pred             cccccccceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHH---
Confidence            12333443        321   2        56799999999999999999999999754  467788999999988   


Q ss_pred             hhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC-hhhHHHHHHHHHHHHHHHH
Q psy3252         231 LWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL-AAYTSSKFALKGFAEALYM  309 (475)
Q Consensus       231 ~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~-~~Y~aSKaAl~~l~~sLa~  309 (475)
                                        +++|+.|+++++++++|.|.+  .|+||++||.++..+.++. ..|++||+|+++|+++|+.
T Consensus       149 ------------------~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~  208 (297)
T 1d7o_A          149 ------------------ISASSYSFVSLLSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAF  208 (297)
T ss_dssp             ------------------HHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHH
T ss_pred             ------------------HHHhhhHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence                              999999999999999999975  3899999999999998888 6999999999999999999


Q ss_pred             HHcc-CCcEEEEEeCCCCCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         310 EVKQ-SGLTITLCLPPDTDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       310 El~~-~gIrVn~V~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      |+++ +||+||+|+||+|+|++.........  .......+++|++.|||+|++.+  +++++...+++|
T Consensus       209 e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~--~l~s~~~~~itG  276 (297)
T 1d7o_A          209 EAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAA--FLVSPLASAITG  276 (297)
T ss_dssp             HHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHH--HHTSGGGTTCCS
T ss_pred             HhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHH--HHhCccccCCCC
Confidence            9985 89999999999999998764311000  01111347789999999999864  455665566555

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-34  Score=275.58  Aligned_cols=218  Identities=25%  Similarity=0.279  Sum_probs=183.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++                            ..+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------------------~~~   54 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----------------------------PGI   54 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----------------------------TTC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------------------cCC
Confidence            4578999999999999999999999999999999999988776554432                            123


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.++++++++    .++++|+||||||+....++.+.+.++++..                     +++|+
T Consensus        55 ~~~~~D~~-~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~---------------------~~~N~  108 (244)
T 1cyd_A           55 EPVCVDLG-DWDATEKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRS---------------------FSVNL  108 (244)
T ss_dssp             EEEECCTT-CHHHHHHHHT----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             CcEEecCC-CHHHHHHHHH----HcCCCCEEEECCcccCCCCcccCCHHHHHHH---------------------Hhhhh
Confidence            45699999 9998888776    5789999999999887777888899999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|++++++++++.|.+++ .|+||++||..+..+.++...|++||++++.|+++++.|++++||+|++|+||+|.|++..
T Consensus       109 ~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          109 RSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence            999999999999998876 6999999999999999999999999999999999999999999999999999999999754


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceee
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ........  ......+.+++..|+|++++.+.+.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          189 KVSADPEFARKLKERHPLRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHh
Confidence            22111101  1111246788999999999876543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.5e-34  Score=280.44  Aligned_cols=217  Identities=24%  Similarity=0.263  Sum_probs=175.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      |+++||++|||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..+.                      .+
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~----------------------~~   56 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPK----------------------VN   56 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTT----------------------SE
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCC----------------------ce
Confidence            3578999999999999999999999999996 9999998642  223344333211                      46


Q ss_pred             EEEEEeecCCCH-HHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDY-ENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~-~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |. ++++++++++.+.++++|+||||||+.        +.++++.+                     +++
T Consensus        57 ~~~~~~D~~-~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~--------~~~~~~~~---------------------~~~  106 (254)
T 1sby_A           57 ITFHTYDVT-VPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERT---------------------IAI  106 (254)
T ss_dssp             EEEEECCTT-SCHHHHHHHHHHHHHHHSCCCEEEECCCCC--------CTTCHHHH---------------------HHH
T ss_pred             EEEEEEecC-CChHHHHHHHHHHHHhcCCCCEEEECCccC--------CHHHHhhh---------------------hee
Confidence            889999999 87 999999999999999999999999974        33456666                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC---CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRG---RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      |+.|+++++++++|.|.+++   .|+||++||.++..+.++...|++||+|+++|+++|+.|+.++||+||+|+||+|+|
T Consensus       107 N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t  186 (254)
T 1sby_A          107 NFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRT  186 (254)
T ss_dssp             HTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEES
T ss_pred             eehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccC
Confidence            99999999999999997764   589999999999999999999999999999999999999998999999999999999


Q ss_pred             CCCcccccC---CccccccccccCCCCChHHhhhccceee
Q psy3252         329 PGFENEEKS---KPRETSLISQTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       329 ~~~~~~~~~---~~~~~~~~~~~~~~~~pe~va~~~~~~~  365 (475)
                      ++.......   .+.... ......+..|||+|++.+.+.
T Consensus       187 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dvA~~i~~~~  225 (254)
T 1sby_A          187 PLVHTFNSWLDVEPRVAE-LLLSHPTQTSEQCGQNFVKAI  225 (254)
T ss_dssp             HHHHSCCCGGGSCTTHHH-HHTTSCCEEHHHHHHHHHHHH
T ss_pred             ccccccchhhhhhHHHHH-HHhcCCCCCHHHHHHHHHHHH
Confidence            976542211   111111 111123458999999876544

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.3e-34  Score=290.27  Aligned_cols=240  Identities=20%  Similarity=0.162  Sum_probs=182.9

Q ss_pred             CCCCCCEEEEecC--CChHHHHHHHHHHHcCCEEEEEecChhH------HHH-HHHHHHHhCCCCcchhhhhHHHhhhcC
Q psy3252          94 LAPTNGTLSVTGG--SSGIGKHVAIEAAKRGAHVTIVARDEKK------LLQ-AQEEIKKACPNPKFIRFIEYEEIKKAC  164 (475)
Q Consensus        94 ~~l~gk~vLITGa--s~GIG~aiA~~La~~Ga~Vvl~~R~~~~------l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~  164 (475)
                      ++++||++|||||  ++|||+++|++|+++|++|++++|+...      .+. ..+++.+.. .                
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~----------------   67 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP-D----------------   67 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCT-T----------------
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhh-c----------------
Confidence            4578999999999  8999999999999999999999986421      000 001111100 0                


Q ss_pred             CCCCccceEEE------------EEeecCC-------CHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHH
Q psy3252         165 PNPKFIRFIEY------------VSLDISK-------DYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQD  223 (475)
Q Consensus       165 ~~~~~~~~v~~------------~~~Dvt~-------d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~  223 (475)
                        ......+.+            +.+|+++       |.++++++++++.+++|+||+||||||+..  ..++.+.+.++
T Consensus        68 --~~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~  145 (315)
T 2o2s_A           68 --GSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKG  145 (315)
T ss_dssp             --SCBCCCSCEEECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHH
T ss_pred             --cccccccccccccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHH
Confidence              000000122            2345551       256899999999999999999999999863  46788899999


Q ss_pred             HHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC-hhhHHHHHHHHH
Q psy3252         224 IKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL-AAYTSSKFALKG  302 (475)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~-~~Y~aSKaAl~~  302 (475)
                      |+.+                     +++|+.|+++++++++|.|.++  |+||++||.++..+.++. ..|++||+|+++
T Consensus       146 ~~~~---------------------~~~N~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~  202 (315)
T 2o2s_A          146 YLAA---------------------SSNSAYSFVSLLQHFGPIMNEG--GSAVTLSYLAAERVVPGYGGGMSSAKAALES  202 (315)
T ss_dssp             HHHH---------------------HHHHTHHHHHHHHHHSTTEEEE--EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHH
T ss_pred             HHHH---------------------HhhhhHHHHHHHHHHHHHHhcC--CEEEEEecccccccCCCccHHHHHHHHHHHH
Confidence            9988                     9999999999999999999763  899999999999988887 599999999999


Q ss_pred             HHHHHHHHHcc-CCcEEEEEeCCCCCCCCCcccccCCcc---c-----cccccccCCCCChHHhhhccceeeecCCCCCC
Q psy3252         303 FAEALYMEVKQ-SGLTITLCLPPDTDTPGFENEEKSKPR---E-----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTD  373 (475)
Q Consensus       303 l~~sLa~El~~-~gIrVn~V~PG~v~T~~~~~~~~~~~~---~-----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~  373 (475)
                      |+++|+.|+++ +||+||+|+||+|+|++..........   .     .....|++|+++|||+|++.+  |++++...+
T Consensus       203 l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~--~L~s~~~~~  280 (315)
T 2o2s_A          203 DTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAAL--FLLSPLARA  280 (315)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHH--HHTSGGGTT
T ss_pred             HHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHH--HHhCchhcc
Confidence            99999999985 999999999999999976533211100   0     012348899999999999865  566666667


Q ss_pred             CCCc
Q psy3252         374 TPGF  377 (475)
Q Consensus       374 ~~g~  377 (475)
                      ++|-
T Consensus       281 itG~  284 (315)
T 2o2s_A          281 VSGV  284 (315)
T ss_dssp             CCSC
T ss_pred             CcCC
Confidence            6663

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=3.8e-33  Score=271.73  Aligned_cols=216  Identities=21%  Similarity=0.255  Sum_probs=180.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAK-RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~-~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++|++|||||++|||+++|++|++ +|++|++++|+.++++++.+++...+                        .++.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~------------------------~~~~   57 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG------------------------LSPR   57 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT------------------------CCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC------------------------CeeE
Confidence            4589999999999999999999999 99999999999998888888876543                        4577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCC-HHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT-MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++++++++++.++++++|+||||||+..... .+.+ .++++.+                     +++|+
T Consensus        58 ~~~~Dl~-~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~-~~~~~~~~~~~~---------------------~~~N~  114 (276)
T 1wma_A           58 FHQLDID-DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA-DPTPFHIQAEVT---------------------MKTNF  114 (276)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTT-CCSCHHHHHHHH---------------------HHHHT
T ss_pred             EEECCCC-CHHHHHHHHHHHHHhcCCCCEEEECCcccccCC-CccccHHHHHhh---------------------hheee
Confidence            8999999 999999999999999999999999999875433 2333 4777776                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccccc------------------------------------------CCCCh
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLG------------------------------------------IYGLA  291 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------------------------------------~~~~~  291 (475)
                      .|+++++++++|.|.+  .|+||++||..+..+                                          .| ..
T Consensus       115 ~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~  191 (276)
T 1wma_A          115 FGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP-SS  191 (276)
T ss_dssp             HHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SC
T ss_pred             eeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCc-cc
Confidence            9999999999999875  379999999877643                                          12 37


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcc----CCcEEEEEeCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeec
Q psy3252         292 AYTSSKFALKGFAEALYMEVKQ----SGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLC  367 (475)
Q Consensus       292 ~Y~aSKaAl~~l~~sLa~El~~----~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~  367 (475)
                      .|++||++++.|+++++.|+++    .||+||+|+||+|.|++...               .+...|+|+|++.+.+...
T Consensus       192 ~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~l~~~  256 (276)
T 1wma_A          192 AYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---------------KATKSPEEGAETPVYLALL  256 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---------------TCSBCHHHHTHHHHHHHSC
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---------------cccCChhHhhhhHhhhhcC
Confidence            9999999999999999999988    79999999999999997653               2568999999987665532


Q ss_pred             CCCCCCCCC
Q psy3252         368 LPPDTDTPG  376 (475)
Q Consensus       368 ~~~~~~~~g  376 (475)
                      ......++|
T Consensus       257 ~~~~~~~~G  265 (276)
T 1wma_A          257 PPDAEGPHG  265 (276)
T ss_dssp             CTTCCCCCS
T ss_pred             cccccccCc
Confidence            222235555

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=3.4e-34  Score=296.84  Aligned_cols=226  Identities=12%  Similarity=-0.012  Sum_probs=185.0

Q ss_pred             CCCCEEEEecCCChHHHH--HHHHHHHcCCEEEEEecChhH------------HHHHHHHHHHhCCCCcchhhhhHHHhh
Q psy3252          96 PTNGTLSVTGGSSGIGKH--VAIEAAKRGAHVTIVARDEKK------------LLQAQEEIKKACPNPKFIRFIEYEEIK  161 (475)
Q Consensus        96 l~gk~vLITGas~GIG~a--iA~~La~~Ga~Vvl~~R~~~~------------l~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (475)
                      ..||++|||||++|||++  +|++|+++|++|++++|+...            .+.+.+.+.+.+               
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------------  122 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG---------------  122 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT---------------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC---------------
Confidence            679999999999999999  999999999999999997543            233333333332               


Q ss_pred             hcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-------------cCCCc------------
Q psy3252         162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-------------LCGTL------------  216 (475)
Q Consensus       162 ~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-------------~~~~~------------  216 (475)
                               .++.++.+|++ |.++++++++++.+++|+||+||||||..             ...++            
T Consensus       123 ---------~~~~~~~~Dvt-d~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~  192 (418)
T 4eue_A          123 ---------LVAKNFIEDAF-SNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVE  192 (418)
T ss_dssp             ---------CCEEEEESCTT-CHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETT
T ss_pred             ---------CcEEEEEeeCC-CHHHHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccc
Confidence                     56888999999 99999999999999999999999999984             22233            


Q ss_pred             ---------ccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH-HHHHHHHHHHHhCCCCeEEEecccccccc
Q psy3252         217 ---------EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI-HMTKALVEGMKQRGRGCIVITASQAANLG  286 (475)
Q Consensus       217 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~-~l~~~~lp~m~~~~~g~IV~iSS~a~~~~  286 (475)
                               .+.+.++|+..                     +++|..+.+ .+++++++.+...+.|+||++||+++..+
T Consensus       193 ~~~~~~~~~~~~t~e~~~~~---------------------~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~  251 (418)
T 4eue_A          193 RDEITLKKVSSASIEEIEET---------------------RKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT  251 (418)
T ss_dssp             TTEEEEEEECBCCHHHHHHH---------------------HHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG
T ss_pred             ccccccccccCCCHHHHHHH---------------------HHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC
Confidence                     35678888877                     999999988 78888777554445689999999999999


Q ss_pred             CCCC--hhhHHHHHHHHHHHHHHHHHHcc-CCcEEEEEeCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccce
Q psy3252         287 IYGL--AAYTSSKFALKGFAEALYMEVKQ-SGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLT  363 (475)
Q Consensus       287 ~~~~--~~Y~aSKaAl~~l~~sLa~El~~-~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~  363 (475)
                      .|.+  ++|++||+|+++|+++||.||++ +|||||+|+||.|.|++................++++.+.||+++++...
T Consensus       252 ~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~  331 (418)
T 4eue_A          252 YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIER  331 (418)
T ss_dssp             TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred             CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHH
Confidence            9988  99999999999999999999999 99999999999999998765532222222334578899999999998777


Q ss_pred             eeec
Q psy3252         364 ITLC  367 (475)
Q Consensus       364 ~~~~  367 (475)
                      ++-.
T Consensus       332 L~sd  335 (418)
T 4eue_A          332 MFSE  335 (418)
T ss_dssp             HHHH
T ss_pred             Hhhc
Confidence            6543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-33  Score=269.47  Aligned_cols=210  Identities=26%  Similarity=0.327  Sum_probs=177.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||++|||+++|++|+++|++|++++|+.+ .                                   .++.++.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------------------------------~~~~~~~   45 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------------------------------EDLIYVE   45 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------------------------------SSSEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------------------------------cceEEEe
Confidence            689999999999999999999999999999999864 1                                   2346789


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCH----HHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM----QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +|++ |.++++++++++ ++++++|+||||||+....++.+.+.    ++++.+                     +++|+
T Consensus        46 ~D~~-~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~---------------------~~~n~  102 (242)
T 1uay_A           46 GDVT-REEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRV---------------------LEVNL  102 (242)
T ss_dssp             CCTT-CHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHH---------------------HHHHT
T ss_pred             CCCC-CHHHHHHHHHHH-HhhCCceEEEEcccccCcccccccccccchHHHHHH---------------------HHHHh
Confidence            9999 999999999999 88999999999999876666655443    378877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC---C---CeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRG---R---GCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~---~---g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      .+++++++++++.|.+++   .   |+||++||..+..+.++...|++||++++.|+++++.|++++||+|++|+||+|+
T Consensus       103 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  182 (242)
T 1uay_A          103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFD  182 (242)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCS
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCc
Confidence            999999999999998764   3   4999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCcccccccccc-CCCCChHHhhhccceeee
Q psy3252         328 TPGFENEEKSKPRETSLISQT-GGLYRPEVVKQSGLTITL  366 (475)
Q Consensus       328 T~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~~~~~~~~  366 (475)
                      |++................+. +++..|||++++.+.++.
T Consensus       183 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  222 (242)
T 1uay_A          183 TPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE  222 (242)
T ss_dssp             SHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH
T ss_pred             chhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhc
Confidence            997654321111111122355 789999999998766543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.98  E-value=6.2e-33  Score=268.91  Aligned_cols=207  Identities=17%  Similarity=0.234  Sum_probs=155.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||++|||+++|++|+++|++|++++|+.++++                                  .   .+.+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------------------------------~---~~~~   44 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----------------------------------A---DLST   44 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------------------------------C---CTTS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----------------------------------c---cccc
Confidence            68999999999999999999999999999999865321                                  0   1468


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.++++++++++   ++++|+||||||+....       +.++.+                     +++|+.|+++
T Consensus        45 Dl~-~~~~v~~~~~~~---~~~id~lv~~Ag~~~~~-------~~~~~~---------------------~~~N~~g~~~   92 (257)
T 1fjh_A           45 AEG-RKQAIADVLAKC---SKGMDGLVLCAGLGPQT-------KVLGNV---------------------VSVNYFGATE   92 (257)
T ss_dssp             HHH-HHHHHHHHHTTC---TTCCSEEEECCCCCTTC-------SSHHHH---------------------HHHHTHHHHH
T ss_pred             CCC-CHHHHHHHHHHh---CCCCCEEEECCCCCCCc-------ccHHHH---------------------HHHhhHHHHH
Confidence            999 888888877632   38999999999976411       125555                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEecccccc----------------------------ccCCCChhhHHHHHHHHHHHHHHHHH
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAAN----------------------------LGIYGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~----------------------------~~~~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                      ++++++|.|.+++.|+||++||.++.                            .+.++...|++||+|++.|+++++.|
T Consensus        93 l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  172 (257)
T 1fjh_A           93 LMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAA  172 (257)
T ss_dssp             HHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            99999999998888999999999987                            34446789999999999999999999


Q ss_pred             HccCCcEEEEEeCCCCCCCCCccc-ccCC-cccccc-ccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         311 VKQSGLTITLCLPPDTDTPGFENE-EKSK-PRETSL-ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~T~~~~~~-~~~~-~~~~~~-~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++++||+||+|+||+|+|++.... .... ...... ..++++...|||+|++.+.+  +.+....++|
T Consensus       173 ~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l--~~~~~~~~tG  239 (257)
T 1fjh_A          173 WGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFL--MSPAASYVHG  239 (257)
T ss_dssp             HHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHH--TSGGGTTCCS
T ss_pred             HhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHH--hCchhcCCcC
Confidence            999999999999999999987654 1111 111111 34678999999999986553  3443444444

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=7.1e-31  Score=280.69  Aligned_cols=224  Identities=17%  Similarity=0.177  Sum_probs=185.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCE-EEEE-ecC-------------hhHHHHHHHHHHHhCCCCcchhhhhHHHhh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIV-ARD-------------EKKLLQAQEEIKKACPNPKFIRFIEYEEIK  161 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~-~R~-------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (475)
                      ++|++|||||++|||+++|++|+++|++ |+++ +|+             .+.++++.+++.+.+               
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---------------  314 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG---------------  314 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHT---------------
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC---------------
Confidence            5889999999999999999999999996 7777 898             355667777776654               


Q ss_pred             hcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhh
Q psy3252         162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLA  241 (475)
Q Consensus       162 ~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (475)
                               .++.++.||++ |.++++++++++. ++++||+||||||+...+.+.+.+.++++.+              
T Consensus       315 ---------~~v~~~~~Dvt-d~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v--------------  369 (525)
T 3qp9_A          315 ---------ATATVVTCDLT-DAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARV--------------  369 (525)
T ss_dssp             ---------CEEEEEECCTT-SHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHH--------------
T ss_pred             ---------CEEEEEECCCC-CHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHH--------------
Confidence                     67899999999 9999999999998 7999999999999998888999999999988              


Q ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         242 LWRSWTVIDLNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       242 ~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                             +++|+.|++++++.+.+.|.+++ .++||++||+++..+.++++.|+++|+++++|    +.++.++||+|++
T Consensus       370 -------~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaaaKa~l~~l----A~~~~~~gi~v~s  438 (525)
T 3qp9_A          370 -------VTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYAAGTAFLDAL----AGQHRADGPTVTS  438 (525)
T ss_dssp             -------HHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTCHHHHHHHHHHHHH----HTSCCSSCCEEEE
T ss_pred             -------HHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCCHHHHHHHHHHHHH----HHHHHhCCCCEEE
Confidence                   99999999999999999998776 69999999999999999999999999999887    4567888999999


Q ss_pred             EeCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCCh
Q psy3252         321 CLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRP  400 (475)
Q Consensus       321 V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  400 (475)
                      |+||.++|+|.......                 +....                                 .....++|
T Consensus       439 I~pG~~~tgm~~~~~~~-----------------~~~~~---------------------------------~g~~~l~p  468 (525)
T 3qp9_A          439 VAWSPWEGSRVTEGATG-----------------ERLRR---------------------------------LGLRPLAP  468 (525)
T ss_dssp             EEECCBTTSGGGSSHHH-----------------HHHHH---------------------------------TTBCCBCH
T ss_pred             EECCccccccccchhhH-----------------HHHHh---------------------------------cCCCCCCH
Confidence            99999999975321100                 00000                                 01125799


Q ss_pred             HHHHHHHHHHHhcCCeeEEeC
Q psy3252         401 EVVAKQLLEDALKGNYFSTVG  421 (475)
Q Consensus       401 e~vA~~i~~ai~~g~~~~~~~  421 (475)
                      +++++.+...+..+...+++.
T Consensus       469 ee~a~~l~~~l~~~~~~v~v~  489 (525)
T 3qp9_A          469 ATALTALDTALGHGDTAVTIA  489 (525)
T ss_dssp             HHHHHHHHHHHHHTCSEEEEC
T ss_pred             HHHHHHHHHHHhCCCCeEEEE
Confidence            999999999999887666654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=9.4e-31  Score=244.92  Aligned_cols=171  Identities=21%  Similarity=0.286  Sum_probs=150.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||++|||++++++|+++  +|++++|+.++++++.+++.                           .  .++.+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~---------------------------~--~~~~~   49 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG---------------------------A--RALPA   49 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT---------------------------C--EECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc---------------------------C--cEEEe
Confidence            57999999999999999999999  99999999888776655431                           1  57889


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+++++++++    ++++|+||||||.....++.+.+.++++..                     +++|+.|+++
T Consensus        50 D~~-~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~~~  103 (207)
T 2yut_A           50 DLA-DELEAKALLEE----AGPLDLLVHAVGKAGRASVREAGRDLVEEM---------------------LAAHLLTAAF  103 (207)
T ss_dssp             CTT-SHHHHHHHHHH----HCSEEEEEECCCCCCCBCSCC---CHHHHH---------------------HHHHHHHHHH
T ss_pred             eCC-CHHHHHHHHHh----cCCCCEEEECCCcCCCCChhhCCHHHHHHH---------------------HHHHhHHHHH
Confidence            999 99999998876    689999999999987777888888888887                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +++++    .+++.++||++||..+..+.++...|++||++++.|+++++.|++++||++++|+||++.|++
T Consensus       104 l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~  171 (207)
T 2yut_A          104 VLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGL  171 (207)
T ss_dssp             HHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred             HHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence            99988    334558999999999999999999999999999999999999999999999999999999995

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=2.2e-30  Score=303.03  Aligned_cols=230  Identities=17%  Similarity=0.162  Sum_probs=186.4

Q ss_pred             ccCCCCCCCEEEEecCCCh-HHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCC
Q psy3252          91 KRYLAPTNGTLSVTGGSSG-IGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPK  168 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~G-IG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
                      +..++++||++|||||++| ||+++|++|+++|++|+++ +|+.++++++.+++.+.....                   
T Consensus       668 ~~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~-------------------  728 (1887)
T 2uv8_A          668 FNGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAK-------------------  728 (1887)
T ss_dssp             HTCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCT-------------------
T ss_pred             cccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcC-------------------
Confidence            3456789999999999998 9999999999999999998 688888888777775432110                   


Q ss_pred             ccceEEEEEeecCCCHHHHHHHHHHHHHh-----cC-CccEEEEccccccCC-CcccCC--HHHHHHhhhhhhhccccch
Q psy3252         169 FIRFIEYVSLDISKDYENIRSALQPAMDR-----CG-PVYMLVNCAGMALCG-TLEEMT--MQDIKVMEQPLWLRGYHTR  239 (475)
Q Consensus       169 ~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~-----~g-~IDvLVnnAG~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~  239 (475)
                       +.++.++.||++ |.++++++++++.++     +| +||+||||||+...+ ++.+.+  .++|+.+            
T Consensus       729 -g~~v~~v~~DVs-d~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v------------  794 (1887)
T 2uv8_A          729 -GSTLIVVPFNQG-SKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRI------------  794 (1887)
T ss_dssp             -TCEEEEEECCTT-CHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHH------------
T ss_pred             -CCeEEEEEecCC-CHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHH------------
Confidence             157889999999 999999999999998     66 999999999998777 888888  8899988            


Q ss_pred             hhccccchhhhhhHHHHHHHHHHH--HHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHH-HHHHHHHHccCCc
Q psy3252         240 LALWRSWTVIDLNLYGTIHMTKAL--VEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGF-AEALYMEVKQSGL  316 (475)
Q Consensus       240 ~~~~~~~~v~~vN~~g~~~l~~~~--lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l-~~sLa~El~~~gI  316 (475)
                               |++|+.|++.+++.+  +|.|.+++.|+||++||.++..+  +...|++||+|+++| ++.++.|++++ |
T Consensus       795 ---------~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-I  862 (1887)
T 2uv8_A          795 ---------MLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-L  862 (1887)
T ss_dssp             ---------HTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-E
T ss_pred             ---------HHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-e
Confidence                     999999999999988  78888777789999999999877  678999999999999 99999999988 9


Q ss_pred             EEEEEeCCCCC-CCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCC
Q psy3252         317 TITLCLPPDTD-TPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPP  370 (475)
Q Consensus       317 rVn~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~  370 (475)
                      +||+|+||+|+ |+|+..... .. ......++ |.+.|||+|++.+  |++++.
T Consensus       863 rVNaV~PG~V~tT~m~~~~~~-~~-~~~~~~pl-r~~sPEEVA~avl--fLaSd~  912 (1887)
T 2uv8_A          863 TVCGAIIGWTRGTGLMSANNI-IA-EGIEKMGV-RTFSQKEMAFNLL--GLLTPE  912 (1887)
T ss_dssp             EEEEEEECCEECC-----CCT-TH-HHHHTTSC-CCEEHHHHHHHHH--GGGSHH
T ss_pred             EEEEEEecccccccccccchh-HH-HHHHhcCC-CCCCHHHHHHHHH--HHhCCC
Confidence            99999999999 887654111 00 00011122 7789999999865  444443

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=7.9e-31  Score=297.71  Aligned_cols=228  Identities=16%  Similarity=0.163  Sum_probs=186.6

Q ss_pred             CCCCCCCEEEEecCCCh-HHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          93 YLAPTNGTLSVTGGSSG-IGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        93 ~~~l~gk~vLITGas~G-IG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .++++||++|||||++| ||+++|++|+++|++|+++ +|+.++++++.+++.+....                    .+
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a--------------------~G  530 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA--------------------KG  530 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCC--------------------TT
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhc--------------------CC
Confidence            46789999999999998 9999999999999999998 68777776666665433211                    11


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHh-----cC-CccEEEEccccccCC-CcccCC--HHHHHHhhhhhhhccccchhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDR-----CG-PVYMLVNCAGMALCG-TLEEMT--MQDIKVMEQPLWLRGYHTRLA  241 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~-----~g-~IDvLVnnAG~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~  241 (475)
                      .++.++.+|++ |.++++++++++.+.     +| +||+||||||+.... ++.+.+  .++|+++              
T Consensus       531 a~V~vV~~DVT-D~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv--------------  595 (1688)
T 2pff_A          531 STLIVVPFNQG-SKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRI--------------  595 (1688)
T ss_dssp             CEEEEEECCSS-STTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHH--------------
T ss_pred             CeEEEEEeCCC-CHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHH--------------
Confidence            57889999999 999999999999998     77 999999999998776 788888  8899988              


Q ss_pred             ccccchhhhhhHHHHHHHHHHH--HHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHH-HHHHHHHHccCCcEE
Q psy3252         242 LWRSWTVIDLNLYGTIHMTKAL--VEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGF-AEALYMEVKQSGLTI  318 (475)
Q Consensus       242 ~~~~~~v~~vN~~g~~~l~~~~--lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l-~~sLa~El~~~gIrV  318 (475)
                             |++|+.|++.+++.+  +|.|.+++.|+||++||.++..+  +...|++||+|+++| ++.++.|++++ |+|
T Consensus       596 -------~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRV  665 (1688)
T 2pff_A          596 -------MLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTV  665 (1688)
T ss_dssp             -------TTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EEC
T ss_pred             -------HHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEE
Confidence                   999999999999998  88898877789999999999877  678999999999999 88899999888 999


Q ss_pred             EEEeCCCCC-CCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCC
Q psy3252         319 TLCLPPDTD-TPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPP  370 (475)
Q Consensus       319 n~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~  370 (475)
                      |+|+||+|+ |+|.........  .....++ |.+.|||+|++.+  +++++.
T Consensus       666 NaVaPG~V~TT~M~~~~e~~~~--~l~~ipl-R~~sPEEVA~aIl--FLaSd~  713 (1688)
T 2pff_A          666 CGAIIGWTRGTGLMSANNIIAE--GIEKMGV-RTFSQKEMAFNLL--GLLTPE  713 (1688)
T ss_dssp             CCCCCCCCCCCSSSCTTTTCST--TTSSSSC-CCCCCCTTHHHHH--HHTSTT
T ss_pred             EEEEECcCcCCcccCCchHHHH--HHHhCCC-CCCCHHHHHHHHH--HHhCCC
Confidence            999999999 787654111110  0011122 6779999999865  455554

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.96  E-value=1.7e-29  Score=235.90  Aligned_cols=162  Identities=22%  Similarity=0.310  Sum_probs=147.8

Q ss_pred             CC-EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NG-TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk-~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      || ++|||||+||||++++++|+ +|++|++++|+.+                                         ++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------------------------------~~   39 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------------------------------DV   39 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------------------------------SE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------------------------------ce
Confidence            44 79999999999999999999 9999999999753                                         26


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.++++++++.+    +++|+||||||.....++.+.+.++++..                     +++|+.++
T Consensus        40 ~~D~~-~~~~~~~~~~~~----~~~d~vi~~ag~~~~~~~~~~~~~~~~~~---------------------~~~n~~~~   93 (202)
T 3d7l_A           40 TVDIT-NIDSIKKMYEQV----GKVDAIVSATGSATFSPLTELTPEKNAVT---------------------ISSKLGGQ   93 (202)
T ss_dssp             ECCTT-CHHHHHHHHHHH----CCEEEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHTTTHHH
T ss_pred             eeecC-CHHHHHHHHHHh----CCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HhhccHHH
Confidence            79999 999999888764    78999999999887777888899999887                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +++++++.+.|.+.  ++||++||..+..+.++...|++||++++.++++++.|+ ++||+|++|+||++.|++
T Consensus        94 ~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~  164 (202)
T 3d7l_A           94 INLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESW  164 (202)
T ss_dssp             HHHHHTTGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGH
T ss_pred             HHHHHHHHHHhccC--CEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCch
Confidence            99999999998653  899999999999999999999999999999999999999 889999999999999985

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.96  E-value=2.3e-29  Score=294.01  Aligned_cols=227  Identities=18%  Similarity=0.197  Sum_probs=185.1

Q ss_pred             CCCCCCCEEEEecCCCh-HHHHHHHHHHHcCCEEEEEe-cChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          93 YLAPTNGTLSVTGGSSG-IGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        93 ~~~l~gk~vLITGas~G-IG~aiA~~La~~Ga~Vvl~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .++++||++|||||++| ||+++|++|+++|++|++++ |+.++++++.+++.+.....                    +
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~--------------------G  706 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGAR--------------------G  706 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCT--------------------T
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhcc--------------------C
Confidence            46789999999999999 99999999999999999985 77777777766664432110                    1


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHh---cC-CccEEEEccccccCC-CcccCC--HHHHHHhhhhhhhccccchhhcc
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDR---CG-PVYMLVNCAGMALCG-TLEEMT--MQDIKVMEQPLWLRGYHTRLALW  243 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~---~g-~IDvLVnnAG~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  243 (475)
                      .++.++.||++ |.++++++++++.++   +| +||+||||||+...+ ++.+.+  .++|+.+                
T Consensus       707 ~~v~~v~~DVs-d~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~v----------------  769 (1878)
T 2uv9_A          707 SQLVVVPFNQG-SKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRI----------------  769 (1878)
T ss_dssp             CEEEEEECCTT-CHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHH----------------
T ss_pred             CeEEEEEcCCC-CHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHH----------------
Confidence            57889999999 999999999999998   99 999999999998776 888888  7899988                


Q ss_pred             ccchhhhhhHHHHHHHHHH--HHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHH-HHccCCcEEEE
Q psy3252         244 RSWTVIDLNLYGTIHMTKA--LVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYM-EVKQSGLTITL  320 (475)
Q Consensus       244 ~~~~v~~vN~~g~~~l~~~--~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~-El~~~gIrVn~  320 (475)
                           |++|+.|++++++.  +++.|.+++.|+||++||.++..+  +...|++||+|+++|++.++. |++++ |+||+
T Consensus       770 -----l~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNa  841 (1878)
T 2uv9_A          770 -----MLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICG  841 (1878)
T ss_dssp             -----HTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEE
T ss_pred             -----HHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEE
Confidence                 99999999999987  788888776789999999999877  578999999999999987665 47777 99999


Q ss_pred             EeCCCCC-CCCCcccccCCccccccccccC-CCCChHHhhhccceeeecCCC
Q psy3252         321 CLPPDTD-TPGFENEEKSKPRETSLISQTG-GLYRPEVVKQSGLTITLCLPP  370 (475)
Q Consensus       321 V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~-~~~~pe~va~~~~~~~~~~~~  370 (475)
                      |+||+|+ |+|......    ........+ |.+.|||++++.+  +++++.
T Consensus       842 VaPG~V~gT~m~~~~~~----~~~~~~~~plr~~sPeEVA~avl--fLaSd~  887 (1878)
T 2uv9_A          842 AVIGWTRGTGLMSANNL----VAEGVEKLGVRTFSQQEMAFNLL--GLMAPA  887 (1878)
T ss_dssp             EEECCBCCTTSCSHHHH----THHHHHTTTCCCBCHHHHHHHHH--HHHSHH
T ss_pred             EEecceecCcccccchh----hHHHHHhcCCCCCCHHHHHHHHH--HHhCCc
Confidence            9999999 998754211    011111222 6779999999854  455543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=2.9e-28  Score=258.14  Aligned_cols=180  Identities=23%  Similarity=0.330  Sum_probs=157.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh---hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE---KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +|++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.+++.+.+                        .++
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g------------------------~~v  294 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG------------------------VRV  294 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT------------------------CEE
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC------------------------CeE
Confidence            58999999999999999999999999 899999974   34566777776654                        678


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc-cCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      .++.||++ |.++++++++++.+. ++||+||||||+. ...++.+.+.++++.+                     +++|
T Consensus       295 ~~~~~Dvt-d~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~v---------------------l~~n  351 (496)
T 3mje_A          295 TIAACDAA-DREALAALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDAL---------------------MRAK  351 (496)
T ss_dssp             EEEECCTT-CHHHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHH---------------------HHTT
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHH---------------------HHHH
Confidence            99999999 999999999998776 7999999999998 6788899999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|++++.+.+.+.    ..++||++||+++..+.+++..|++||+++++|++.    +..+||++++|+||.+.|+++.
T Consensus       352 v~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala~~----~~~~Gi~v~sV~pG~w~~~gm~  423 (496)
T 3mje_A          352 LTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEH----RRSLGLTASSVAWGTWGEVGMA  423 (496)
T ss_dssp             HHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHHHH----HHHTTCCCEEEEECEESSSCC-
T ss_pred             HHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHHHH----HHhcCCeEEEEECCcccCCccc
Confidence            99999999876543    458899999999999999999999999999888764    5567999999999999887544

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=2.4e-28  Score=272.70  Aligned_cols=179  Identities=21%  Similarity=0.320  Sum_probs=163.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHH-HcCC-EEEEEecC---hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAA-KRGA-HVTIVARD---EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La-~~Ga-~Vvl~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .+|++|||||++|||+++|++|+ ++|+ +|++++|+   .++++++.+++.+.+                        .
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G------------------------~  584 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG------------------------A  584 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTT------------------------C
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcC------------------------C
Confidence            58999999999999999999999 7999 69999999   455677777777654                        6


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.||++ |.++++++++++.+.+ +||+||||||+.....+.+++.++|+++                     +++
T Consensus       585 ~v~~~~~Dvs-d~~~v~~~~~~~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~---------------------~~~  641 (795)
T 3slk_A          585 EVSLQACDVA-DRETLAKVLASIPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQV---------------------LRP  641 (795)
T ss_dssp             EEEEEECCTT-CHHHHHHHHHTSCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHH---------------------HCC
T ss_pred             cEEEEEeecC-CHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHH---------------------HHH
Confidence            7999999999 9999999999998876 9999999999998889999999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|++++++++.|.|      +||++||+++..+.++++.|++||+    |+++|+.+++++||++|+|+||++.|+++
T Consensus       642 nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~  711 (795)
T 3slk_A          642 KVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGM  711 (795)
T ss_dssp             CCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCH
T ss_pred             HHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchh
Confidence            9999999999998777      6999999999999999999999995    77778888889999999999999999865


Q ss_pred             c
Q psy3252         332 E  332 (475)
Q Consensus       332 ~  332 (475)
                      .
T Consensus       712 ~  712 (795)
T 3slk_A          712 A  712 (795)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=4.3e-28  Score=233.40  Aligned_cols=198  Identities=21%  Similarity=0.281  Sum_probs=159.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||+||||++++++|+++|++|++++|+.++++                                  .   .+.+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------------------------~---~~~~   44 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----------------------------------A---DLST   44 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------------------------------C---CTTS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----------------------------------c---cccC
Confidence            58999999999999999999999999999999864321                                  0   1468


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ +.++++++++++   .+++|+||||||....       .++++..                     +++|+.|+++
T Consensus        45 D~~-~~~~~~~~~~~~---~~~~d~vi~~Ag~~~~-------~~~~~~~---------------------~~~N~~~~~~   92 (255)
T 2dkn_A           45 PGG-RETAVAAVLDRC---GGVLDGLVCCAGVGVT-------AANSGLV---------------------VAVNYFGVSA   92 (255)
T ss_dssp             HHH-HHHHHHHHHHHH---TTCCSEEEECCCCCTT-------SSCHHHH---------------------HHHHTHHHHH
T ss_pred             Ccc-cHHHHHHHHHHc---CCCccEEEECCCCCCc-------chhHHHH---------------------HHHHhHHHHH
Confidence            999 888888888754   3789999999997641       1124544                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccC--------------------------CCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGI--------------------------YGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--------------------------~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                      +++++++.|.+++.++||++||..+..+.                          ++...|++||++++.+++.++.+++
T Consensus        93 l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~  172 (255)
T 2dkn_A           93 LLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA  172 (255)
T ss_dssp             HHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh
Confidence            99999999998877999999999887654                          4567899999999999999999999


Q ss_pred             cCCcEEEEEeCCCCCCCCCcccccCCc--ccccccc-ccCCCCChHHhhhccceee
Q psy3252         313 QSGLTITLCLPPDTDTPGFENEEKSKP--RETSLIS-QTGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       313 ~~gIrVn~V~PG~v~T~~~~~~~~~~~--~~~~~~~-~~~~~~~pe~va~~~~~~~  365 (475)
                      ++||+|++|+||.|.|++.........  ....... +.++...|+|++++.+.++
T Consensus       173 ~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  228 (255)
T 2dkn_A          173 GRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLL  228 (255)
T ss_dssp             HTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHH
T ss_pred             hcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence            999999999999999997654311111  1111111 6678999999999876544

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=1.5e-26  Score=245.08  Aligned_cols=179  Identities=25%  Similarity=0.318  Sum_probs=155.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChh---HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEK---KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++|||||+||||+++|++|+++|+ +|++++|+..   .++++.+++.+.+                        .+
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g------------------------~~  280 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG------------------------AR  280 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT------------------------CE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC------------------------CE
Confidence            578999999999999999999999999 5999999875   4566666666543                        57


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.||++ |.+++.++++.+ +.+++||+||||||+.....+.+.+.++++.+                     +++|
T Consensus       281 v~~~~~Dv~-d~~~v~~~~~~i-~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~---------------------~~~n  337 (486)
T 2fr1_A          281 TTVAACDVT-DRESVRELLGGI-GDDVPLSAVFHAAATLDDGTVDTLTGERIERA---------------------SRAK  337 (486)
T ss_dssp             EEEEECCTT-CHHHHHHHHHTS-CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHH---------------------THHH
T ss_pred             EEEEEeCCC-CHHHHHHHHHHH-HhcCCCcEEEECCccCCCCccccCCHHHHHHH---------------------HHHH
Confidence            889999999 999999999998 66799999999999988888889999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +.|++++.+.+.+    .+.++||++||.++..+.+++..|+++|+++++|++.    +..+||++++|+||.+.|++
T Consensus       338 v~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~----~~~~gi~v~~i~pG~~~~~g  407 (486)
T 2fr1_A          338 VLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQ----RRSDGLPATAVAWGTWAGSG  407 (486)
T ss_dssp             HHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHH----HHHTTCCCEEEEECCBC---
T ss_pred             HHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHH----HHhcCCeEEEEECCeeCCCc
Confidence            9999999987643    3568999999999999999999999999999888654    45679999999999999873

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=4.5e-26  Score=242.72  Aligned_cols=216  Identities=18%  Similarity=0.238  Sum_probs=176.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChh---HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEK---KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+|++|||||+||||+++|++|+++|+ +|++++|+..   .++++.+++.+.+                        .+
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g------------------------~~  313 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG------------------------CE  313 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT------------------------CE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC------------------------CE
Confidence            478999999999999999999999999 6999999864   4566666665433                        57


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.||++ |.+++.++++.     +++|+||||||+.....+.+.+.++++.+                     +++|
T Consensus       314 v~~~~~Dvt-d~~~v~~~~~~-----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~---------------------~~~n  366 (511)
T 2z5l_A          314 VVHAACDVA-ERDALAALVTA-----YPPNAVFHTAGILDDAVIDTLSPESFETV---------------------RGAK  366 (511)
T ss_dssp             EEEEECCSS-CHHHHHHHHHH-----SCCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHH
T ss_pred             EEEEEeCCC-CHHHHHHHHhc-----CCCcEEEECCcccCCcccccCCHHHHHHH---------------------HHHH
Confidence            899999999 99999988876     78999999999988888888999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC-CCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT-DTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v-~T~~~  331 (475)
                      +.|++++.+.+.+.   .+.++||++||.++..+.+++..|+++|++++.|++.+    ...||++++|+||.+ .|+|.
T Consensus       367 v~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~  439 (511)
T 2z5l_A          367 VCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAERR----RAAGLPATSVAWGLWGGGGMA  439 (511)
T ss_dssp             HHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCC
T ss_pred             HHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHHH----HHcCCcEEEEECCcccCCccc
Confidence            99999998876432   14578999999999999999999999999999988754    467999999999999 77764


Q ss_pred             cccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHH
Q psy3252         332 ENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDA  411 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai  411 (475)
                      .....                  +....                                 .....++++++++.++.++
T Consensus       440 ~~~~~------------------~~~~~---------------------------------~g~~~l~~e~~a~~l~~al  468 (511)
T 2z5l_A          440 AGAGE------------------ESLSR---------------------------------RGLRAMDPDAAVDALLGAM  468 (511)
T ss_dssp             CCHHH------------------HHHHH---------------------------------HTBCCBCHHHHHHHHHHHH
T ss_pred             ccccH------------------HHHHh---------------------------------cCCCCCCHHHHHHHHHHHH
Confidence            43110                  00000                                 0112689999999999999


Q ss_pred             hcCCeeEEeC
Q psy3252         412 LKGNYFSTVG  421 (475)
Q Consensus       412 ~~g~~~~~~~  421 (475)
                      .+++..+++.
T Consensus       469 ~~~~~~v~v~  478 (511)
T 2z5l_A          469 GRNDVCVTVV  478 (511)
T ss_dssp             HHTCSEEEEC
T ss_pred             hCCCCEEEEE
Confidence            9988777654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.93  E-value=8.7e-26  Score=275.96  Aligned_cols=229  Identities=15%  Similarity=0.117  Sum_probs=166.8

Q ss_pred             cCCCCCCCEEEEecCCCh-HHHHHHHHHHHcCCEEEEEecChhH-----HHHHHHHHHHhCCCCcchhhhhHHHhhhcCC
Q psy3252          92 RYLAPTNGTLSVTGGSSG-IGKHVAIEAAKRGAHVTIVARDEKK-----LLQAQEEIKKACPNPKFIRFIEYEEIKKACP  165 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~G-IG~aiA~~La~~Ga~Vvl~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  165 (475)
                      ....++||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+                   
T Consensus      2130 ~~~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G------------------- 2190 (3089)
T 3zen_D         2130 XXXXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFD------------------- 2190 (3089)
T ss_dssp             HTCCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTT-------------------
T ss_pred             ccccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcC-------------------
Confidence            334589999999999999 9999999999999999999998766     444544443221                   


Q ss_pred             CCCccceEEEEEeecCCCHHHHHHHHHHHHH----hcCCccEEEEcccc----ccC-CCcccCCHHHHHHhhhhhhhccc
Q psy3252         166 NPKFIRFIEYVSLDISKDYENIRSALQPAMD----RCGPVYMLVNCAGM----ALC-GTLEEMTMQDIKVMEQPLWLRGY  236 (475)
Q Consensus       166 ~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~----~~g~IDvLVnnAG~----~~~-~~~~~~~~~~~~~~~~~~~~~~~  236 (475)
                           .++..+.+|++ |.++++++++++.+    +||+||+||||||+    ... ....+.+.++|+..         
T Consensus      2191 -----~~~~~v~~Dvt-d~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~--------- 2255 (3089)
T 3zen_D         2191 -----ATLWVVPANMA-SYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSR--------- 2255 (3089)
T ss_dssp             -----CEEEEEECCTT-CHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSH---------
T ss_pred             -----CeEEEEEecCC-CHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHH---------
Confidence                 56888999999 99999999999998    89999999999998    211 12223233332211         


Q ss_pred             cchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCC----eEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHH--
Q psy3252         237 HTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG----CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYME--  310 (475)
Q Consensus       237 ~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g----~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~E--  310 (475)
                              +...+++|+.+++.+++.+.+.|.+++.+    .|+++||..+.  .++..+|++||+|+.+|+++|+.|  
T Consensus      2256 --------~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~ 2325 (3089)
T 3zen_D         2256 --------AEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKS 2325 (3089)
T ss_dssp             --------HHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCST
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCccccc--CCCchHHHHHHHHHHHHHHHHHhccc
Confidence                    00128999999999999999999887542    23344444333  235568999999999999999999  


Q ss_pred             HccCCcEEEEEeCCCCC-CCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCC
Q psy3252         311 VKQSGLTITLCLPPDTD-TPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPP  370 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~  370 (475)
                      +++ +|+||+|+||+|+ |+++......   .........|.++|||||.+.  +||+++.
T Consensus      2326 ~a~-~IrVn~v~PG~v~tT~l~~~~~~~---~~~~~~~~~r~~~PeEIA~av--lfLaS~~ 2380 (3089)
T 3zen_D         2326 WAE-RVSLAHALIGWTKGTGLMGQNDAI---VSAVEEAGVTTYTTDEMAAML--LDLCTVE 2380 (3089)
T ss_dssp             TTT-TEEEEEEECCCEECSTTTTTTTTT---HHHHGGGSCBCEEHHHHHHHH--HHTTSHH
T ss_pred             cCC-CeEEEEEeecccCCCcccccchhH---HHHHHhcCCCCCCHHHHHHHH--HHHhChh
Confidence            665 6999999999999 6665432111   111111123556999999875  4566654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=7.6e-25  Score=213.84  Aligned_cols=157  Identities=16%  Similarity=0.152  Sum_probs=132.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++|+||||||+||||++++++|+++|++|++++|+..+.+                                 ..++.++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------------------------------~~~~~~~   48 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------------------------------GPNEECV   48 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------------------------------CTTEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------------------------------CCCCEEE
Confidence            4689999999999999999999999999999999864321                                 0468899


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++       ++|+||||||+..        .++++.+                     +++|+.|+
T Consensus        49 ~~Dl~-d~~~~~~~~~-------~~D~vi~~Ag~~~--------~~~~~~~---------------------~~~N~~g~   91 (267)
T 3rft_A           49 QCDLA-DANAVNAMVA-------GCDGIVHLGGISV--------EKPFEQI---------------------LQGNIIGL   91 (267)
T ss_dssp             ECCTT-CHHHHHHHHT-------TCSEEEECCSCCS--------CCCHHHH---------------------HHHHTHHH
T ss_pred             EcCCC-CHHHHHHHHc-------CCCEEEECCCCcC--------cCCHHHH---------------------HHHHHHHH
Confidence            99999 9999888876       7999999999842        2234555                     99999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEecccccc------------ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAAN------------LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~------------~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                      +++++++.    +.+.++||++||..++            .+.+....|++||++++.+++.++.++   |+++++|.||
T Consensus        92 ~~l~~a~~----~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~  164 (267)
T 3rft_A           92 YNLYEAAR----AHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIG  164 (267)
T ss_dssp             HHHHHHHH----HTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEEC
T ss_pred             HHHHHHHH----HcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEee
Confidence            99999984    3456899999998877            334556899999999999999999885   7999999999


Q ss_pred             CCCCCC
Q psy3252         325 DTDTPG  330 (475)
Q Consensus       325 ~v~T~~  330 (475)
                      .|.+++
T Consensus       165 ~v~~~~  170 (267)
T 3rft_A          165 SCTPEP  170 (267)
T ss_dssp             BCSSSC
T ss_pred             cccCCC
Confidence            999873

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.91  E-value=3.6e-24  Score=204.66  Aligned_cols=161  Identities=16%  Similarity=0.170  Sum_probs=125.2

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .++..+++||++|||||+||||++++++|+++|++|++++|+.++++++..                             
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-----------------------------   63 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-----------------------------   63 (236)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----------------------------
T ss_pred             cccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-----------------------------
Confidence            345677889999999999999999999999999999999999887765432                             


Q ss_pred             cceE-EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         170 IRFI-EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       170 ~~~v-~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                       ..+ .++.+|++          +.+.+.++++|+||||||....        ++++..                     
T Consensus        64 -~~~~~~~~~Dl~----------~~~~~~~~~~D~vi~~ag~~~~--------~~~~~~---------------------  103 (236)
T 3e8x_A           64 -RGASDIVVANLE----------EDFSHAFASIDAVVFAAGSGPH--------TGADKT---------------------  103 (236)
T ss_dssp             -TTCSEEEECCTT----------SCCGGGGTTCSEEEECCCCCTT--------SCHHHH---------------------
T ss_pred             -CCCceEEEcccH----------HHHHHHHcCCCEEEECCCCCCC--------CCcccc---------------------
Confidence             235 78899997          2233445689999999997532        234444                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC---CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI---YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      +++|+.+++++++++..    .+.++||++||..+..+.   +....|+++|++++.+.+       ..||++++|+||.
T Consensus       104 ~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~  172 (236)
T 3e8x_A          104 ILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGP  172 (236)
T ss_dssp             HHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECS
T ss_pred             chhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCc
Confidence            99999999999998743    356899999998776654   457899999999998865       5799999999999


Q ss_pred             CCCCC
Q psy3252         326 TDTPG  330 (475)
Q Consensus       326 v~T~~  330 (475)
                      +.|++
T Consensus       173 v~~~~  177 (236)
T 3e8x_A          173 LSNEE  177 (236)
T ss_dssp             EECSC
T ss_pred             ccCCC
Confidence            99984

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.88  E-value=1.1e-22  Score=206.18  Aligned_cols=169  Identities=17%  Similarity=0.209  Sum_probs=139.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKR-GA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~-Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++|+||||||+|+||.+++++|+++ |+ +|++++|++.+.+.+.+++..                          .++
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~--------------------------~~v   72 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND--------------------------PRM   72 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC--------------------------TTE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC--------------------------CCE
Confidence            67899999999999999999999999 98 999999998887766655421                          357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++       ++|+||||||..... ..+   .+....                     +++|+
T Consensus        73 ~~~~~Dl~-d~~~l~~~~~-------~~D~Vih~Aa~~~~~-~~~---~~~~~~---------------------~~~Nv  119 (344)
T 2gn4_A           73 RFFIGDVR-DLERLNYALE-------GVDICIHAAALKHVP-IAE---YNPLEC---------------------IKTNI  119 (344)
T ss_dssp             EEEECCTT-CHHHHHHHTT-------TCSEEEECCCCCCHH-HHH---HSHHHH---------------------HHHHH
T ss_pred             EEEECCCC-CHHHHHHHHh-------cCCEEEECCCCCCCC-chh---cCHHHH---------------------HHHHH
Confidence            88999999 9888877654       799999999975321 111   112223                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      .|+.++++++.+.    +.++||++||..+..+   ...|++||++++.++++++.++++.|+++++|.||.|.++.
T Consensus       120 ~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          120 MGASNVINACLKN----AISQVIALSTDKAANP---INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR  189 (344)
T ss_dssp             HHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred             HHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence            9999999998764    4578999999876543   57899999999999999999888899999999999999984

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.87  E-value=2.4e-23  Score=199.17  Aligned_cols=191  Identities=15%  Similarity=0.113  Sum_probs=140.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+++|++|||||+||||++++++|+++|+  +|++++|+.+++++..                              ...
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------------------------------~~~   64 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------------------------------YKN   64 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------------------------------GGG
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------------------------------cCC
Confidence            35689999999999999999999999999  9999999865432110                              034


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.+++.++++       ++|+||||||....       .++++..                     +++|
T Consensus        65 ~~~~~~D~~-d~~~~~~~~~-------~~d~vi~~ag~~~~-------~~~~~~~---------------------~~~n  108 (242)
T 2bka_A           65 VNQEVVDFE-KLDDYASAFQ-------GHDVGFCCLGTTRG-------KAGAEGF---------------------VRVD  108 (242)
T ss_dssp             CEEEECCGG-GGGGGGGGGS-------SCSEEEECCCCCHH-------HHHHHHH---------------------HHHH
T ss_pred             ceEEecCcC-CHHHHHHHhc-------CCCEEEECCCcccc-------cCCcccc---------------------eeee
Confidence            678899999 8887776653       79999999996532       1233444                     8999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCc-EEEEEeCCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL-TITLCLPPDTDTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gI-rVn~V~PG~v~T~~~  331 (475)
                      +.++.++++++    .+.+.++||++||..++.  +....|+++|++++.+++.+       ++ ++++|+||.+.|++.
T Consensus       109 ~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~--~~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~  175 (242)
T 2bka_A          109 RDYVLKSAELA----KAGGCKHFNLLSSKGADK--SSNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQ  175 (242)
T ss_dssp             THHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTG
T ss_pred             HHHHHHHHHHH----HHCCCCEEEEEccCcCCC--CCcchHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCC
Confidence            99999888865    445568999999988764  34568999999999998754       56 899999999999964


Q ss_pred             cccccCCcccccc--ccc----cCCCCChHHhhhccceee
Q psy3252         332 ENEEKSKPRETSL--ISQ----TGGLYRPEVVKQSGLTIT  365 (475)
Q Consensus       332 ~~~~~~~~~~~~~--~~~----~~~~~~pe~va~~~~~~~  365 (475)
                      ....... .....  ..+    .++...++|+|++.+.++
T Consensus       176 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  214 (242)
T 2bka_A          176 ESRPGEW-LVRKFFGSLPDSWASGHSVPVVTVVRAMLNNV  214 (242)
T ss_dssp             GGSHHHH-HHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHH
T ss_pred             CCcHHHH-HHHHhhcccCccccCCcccCHHHHHHHHHHHH
Confidence            3211000 00000  011    457889999999876544

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=6.4e-22  Score=242.57  Aligned_cols=180  Identities=21%  Similarity=0.198  Sum_probs=142.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHH---HHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKL---LQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+..+.   .+..+++.+.+                        .+
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g------------------------~~ 1938 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQG------------------------VQ 1938 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTT------------------------CE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCC------------------------CE
Confidence            6899999999999999999999999996 88899986543   34444554432                        57


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.||++ |.++++++++++. ++|+||+||||||+....++.+++.++|+++                     +++|
T Consensus      1939 v~~~~~Dvs-d~~~v~~~~~~~~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~---------------------~~~n 1995 (2512)
T 2vz8_A         1939 VLVSTSNAS-SLDGARSLITEAT-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDV---------------------SKPK 1995 (2512)
T ss_dssp             EEEECCCSS-SHHHHHHHHHHHH-HHSCEEEEEECCCC----------------C---------------------TTTT
T ss_pred             EEEEecCCC-CHHHHHHHHHHHH-hcCCCcEEEECCCcCCCCchhhCCHHHHHHH---------------------HHHH
Confidence            889999999 9999999999987 4899999999999987788889999999987                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +.|++++.+++.+.|.+.  |+||++||+++..+.+++..|++||+++++|++.++.+    |+...++..|.+..-
T Consensus      1996 v~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A         1996 YSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFANSAMERICEKRRHD----GLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp             HHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCBCTT
T ss_pred             HHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCcCCc
Confidence            999999999999988654  89999999999999999999999999999999987765    778888888776543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.86  E-value=4.2e-21  Score=192.45  Aligned_cols=244  Identities=11%  Similarity=0.029  Sum_probs=164.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      |++|++|||||+|+||.+++++|+++|++|++++|+.+..+.  +.+......                      .++.+
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~----------------------~~~~~   56 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIE----------------------NDVKI   56 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCT----------------------TTEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcccc----------------------CceeE
Confidence            357899999999999999999999999999999998754321  122221110                      35788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++.++++.+     ++|+||||||....    +.+.++++..                     +++|+.|
T Consensus        57 ~~~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~---------------------~~~Nv~g  105 (345)
T 2z1m_A           57 IHMDLL-EFSNIIRTIEKV-----QPDEVYNLAAQSFV----GVSFEQPILT---------------------AEVDAIG  105 (345)
T ss_dssp             CCCCTT-CHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHTTSHHHH---------------------HHHHTHH
T ss_pred             EECCCC-CHHHHHHHHHhc-----CCCEEEECCCCcch----hhhhhCHHHH---------------------HHHHHHH
Confidence            899999 999999888766     79999999997531    1112234444                     8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEecccccc-----------ccCCCChhhHHHHHHHHHHHHHHHHHHc---cCCcEEEEE
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAAN-----------LGIYGLAAYTSSKFALKGFAEALYMEVK---QSGLTITLC  321 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-----------~~~~~~~~Y~aSKaAl~~l~~sLa~El~---~~gIrVn~V  321 (475)
                      ++++++++.+.   ...++||++||.+.+           .+..+...|+.||++++.+++.++.+++   ..++.++.+
T Consensus       106 ~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~  182 (345)
T 2z1m_A          106 VLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHE  182 (345)
T ss_dssp             HHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEE
T ss_pred             HHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeec
Confidence            99999998752   113799999998643           2334567899999999999999999876   445677888


Q ss_pred             eCCCCCCCCCcccc-------cCCcccccc-ccccC-CCCChHHhhhccceeeecCCCCCCCCCccccccCCCccccccc
Q psy3252         322 LPPDTDTPGFENEE-------KSKPRETSL-ISQTG-GLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLIS  392 (475)
Q Consensus       322 ~PG~v~T~~~~~~~-------~~~~~~~~~-~~~~~-~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  392 (475)
                      .||.+.|++.....       ......... ..+.. .+..++|++++.+.++...  ..   +.           ..+.
T Consensus       183 gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~---~~-----------~~i~  246 (345)
T 2z1m_A          183 SPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP--EP---DD-----------YVIA  246 (345)
T ss_dssp             CTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSS--SC---CC-----------EEEC
T ss_pred             CCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCC--CC---ce-----------EEEe
Confidence            89988776422110       000000000 01122 3678899998876554321  10   11           1111


Q ss_pred             CCCCCCChHHHHHHHHHHHhcC
Q psy3252         393 QTGGLYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       393 ~~~~~~~~e~vA~~i~~ai~~g  414 (475)
                       ....++..++++.+.+.+...
T Consensus       247 -~~~~~s~~e~~~~i~~~~g~~  267 (345)
T 2z1m_A          247 -TGETHTVREFVEKAAKIAGFD  267 (345)
T ss_dssp             -CSCCEEHHHHHHHHHHHTTCC
T ss_pred             -CCCCccHHHHHHHHHHHhCCC
Confidence             123567889999888777543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.86  E-value=8.7e-21  Score=179.29  Aligned_cols=144  Identities=10%  Similarity=0.064  Sum_probs=119.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHH-HcCCEEEEEecChh-HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAA-KRGAHVTIVARDEK-KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La-~~Ga~Vvl~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .|+++||||+||||++++++|+ ++|++|++++|+.+ +++++.    ...                        ..+.+
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~------------------------~~~~~   56 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDH------------------------ERVTV   56 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTS------------------------TTEEE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCC------------------------CceEE
Confidence            4789999999999999999999 89999999999987 655433    111                        45788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++.++++       .+|+||||||..               -                     ++     
T Consensus        57 ~~~D~~-d~~~~~~~~~-------~~d~vv~~ag~~---------------n---------------------~~-----   87 (221)
T 3r6d_A           57 IEGSFQ-NPGXLEQAVT-------NAEVVFVGAMES---------------G---------------------SD-----   87 (221)
T ss_dssp             EECCTT-CHHHHHHHHT-------TCSEEEESCCCC---------------H---------------------HH-----
T ss_pred             EECCCC-CHHHHHHHHc-------CCCEEEEcCCCC---------------C---------------------hh-----
Confidence            999999 9998888775       689999999852               0                     22     


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCCh----------hhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLA----------AYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~----------~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                          ++.+++.|++.+.++||++||..++.+.++..          .|+++|.+++.+.+.       .||++++|+||+
T Consensus        88 ----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~  156 (221)
T 3r6d_A           88 ----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTW  156 (221)
T ss_dssp             ----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECE
T ss_pred             ----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechh
Confidence                67888888888888999999998877655444          899999999887653       799999999999


Q ss_pred             CCCC
Q psy3252         326 TDTP  329 (475)
Q Consensus       326 v~T~  329 (475)
                      +.++
T Consensus       157 v~~~  160 (221)
T 3r6d_A          157 LYND  160 (221)
T ss_dssp             EECC
T ss_pred             hcCC
Confidence            9887

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.86  E-value=3.1e-21  Score=193.67  Aligned_cols=174  Identities=18%  Similarity=0.201  Sum_probs=136.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+++||||||+|+||.+++++|+++|++|++++|+.+...+..+++....+                       ..+.++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~~~~   60 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG-----------------------KTPAFH   60 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHS-----------------------CCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcC-----------------------CCceEE
Confidence            467999999999999999999999999999999987766666555544321                       357789


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++.     +++|+||||||........    +.....                     +++|+.++
T Consensus        61 ~~Dl~-d~~~~~~~~~~-----~~~d~vih~A~~~~~~~~~----~~~~~~---------------------~~~n~~~~  109 (341)
T 3enk_A           61 ETDVS-DERALARIFDA-----HPITAAIHFAALKAVGESV----AKPIEY---------------------YRNNLDSL  109 (341)
T ss_dssp             CCCTT-CHHHHHHHHHH-----SCCCEEEECCCCCCHHHHH----HCHHHH---------------------HHHHHHHH
T ss_pred             EeecC-CHHHHHHHHhc-----cCCcEEEECccccccCccc----cChHHH---------------------HHHHHHHH
Confidence            99999 99999988875     4899999999976432111    111222                     88999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      +++++++    .+.+.++||++||.+.+-.           ......|+.||++.+.+++.++.++.  |++++++.||.
T Consensus       110 ~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~  183 (341)
T 3enk_A          110 LSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFN  183 (341)
T ss_dssp             HHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECE
T ss_pred             HHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeecc
Confidence            9887764    5556689999999766521           22346899999999999999998853  59999999999


Q ss_pred             CCCCC
Q psy3252         326 TDTPG  330 (475)
Q Consensus       326 v~T~~  330 (475)
                      |.+|.
T Consensus       184 v~G~~  188 (341)
T 3enk_A          184 PVGAH  188 (341)
T ss_dssp             EECCC
T ss_pred             ccCCc
Confidence            99884

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.85  E-value=4.5e-21  Score=191.99  Aligned_cols=175  Identities=21%  Similarity=0.182  Sum_probs=139.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+++++||||||+|+||.+++++|+++|++|++++|+.++.+.+.+.+....+                       .++.
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----------------------~~~~   64 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-----------------------GRFE   64 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-----------------------TTEE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC-----------------------CceE
Confidence            35689999999999999999999999999999999998877766655543321                       3467


Q ss_pred             EE-EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YV-SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~-~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++ .+|++ |.+++.++++       ++|+||||||.....       ++++..                     +++|+
T Consensus        65 ~~~~~D~~-d~~~~~~~~~-------~~d~vih~A~~~~~~-------~~~~~~---------------------~~~n~  108 (342)
T 1y1p_A           65 TAVVEDML-KQGAYDEVIK-------GAAGVAHIASVVSFS-------NKYDEV---------------------VTPAI  108 (342)
T ss_dssp             EEECSCTT-STTTTTTTTT-------TCSEEEECCCCCSCC-------SCHHHH---------------------HHHHH
T ss_pred             EEEecCCc-ChHHHHHHHc-------CCCEEEEeCCCCCCC-------CCHHHH---------------------HHHHH
Confidence            77 79999 8777766553       799999999976421       123334                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccc-cCC------------------------------CChhhHHHHHHHHH
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANL-GIY------------------------------GLAAYTSSKFALKG  302 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~~~------------------------------~~~~Y~aSKaAl~~  302 (475)
                      .|+.++++++.+   ..+.++||++||.+++. +.+                              +...|+.||++.+.
T Consensus       109 ~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~  185 (342)
T 1y1p_A          109 GGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAEL  185 (342)
T ss_dssp             HHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHH
Confidence            999999998864   23457999999987652 211                              23579999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         303 FAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       303 l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +++.++.+++. |+++++|+||.|.+|+..
T Consensus       186 ~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~  214 (342)
T 1y1p_A          186 AAWKFMDENKP-HFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             HHHHHHHHHCC-SSEEEEEEESEEECCCSC
T ss_pred             HHHHHHHhcCC-CceEEEEcCCceECCCCC
Confidence            99999999876 899999999999999654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.85  E-value=2.7e-21  Score=185.10  Aligned_cols=167  Identities=16%  Similarity=0.019  Sum_probs=123.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc--CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++|+++||||+|+||.+++++|+++  |++|++++|+.++++++       .                        .++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~------------------------~~~   50 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------G------------------------GEA   50 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------T------------------------CCT
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------C------------------------CCe
Confidence            45789999999999999999999999  89999999997665432       1                        234


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCc------ccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL------EEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                      .++.+|++ |.+++.++++       .+|+||||||.......      .+.+...++                  ...+
T Consensus        51 ~~~~~D~~-d~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~  104 (253)
T 1xq6_A           51 DVFIGDIT-DADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFE------------------DGQY  104 (253)
T ss_dssp             TEEECCTT-SHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECC------------------TTCS
T ss_pred             eEEEecCC-CHHHHHHHHc-------CCCEEEEeccccccccccccccccccchhhcc------------------cccc
Confidence            57899999 9888887764       58999999997642111      000100000                  0012


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCCh-----hhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLA-----AYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~-----~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      .+++|+.++.++++++..    .+.++||++||..+..+.+...     .|+.+|++++.+++.       .||++++|+
T Consensus       105 ~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vr  173 (253)
T 1xq6_A          105 PEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIR  173 (253)
T ss_dssp             HHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEE
T ss_pred             ceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHHHHh-------CCCceEEEe
Confidence            389999999998887754    3457999999988765443333     366799999887652       789999999


Q ss_pred             CCCCCCCC
Q psy3252         323 PPDTDTPG  330 (475)
Q Consensus       323 PG~v~T~~  330 (475)
                      ||.+.++.
T Consensus       174 pg~v~~~~  181 (253)
T 1xq6_A          174 AGGLLDKE  181 (253)
T ss_dssp             ECEEECSC
T ss_pred             cceeecCC
Confidence            99999985

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.85  E-value=2.1e-20  Score=189.32  Aligned_cols=194  Identities=14%  Similarity=0.041  Sum_probs=151.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHH-HcCCEEEEEecChhH------------HHHHHHHHHHhCCCCcchhhhhHHHh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAA-KRGAHVTIVARDEKK------------LLQAQEEIKKACPNPKFIRFIEYEEI  160 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La-~~Ga~Vvl~~R~~~~------------l~~~~~~l~~~~~~~~~~~~~~~~~~  160 (475)
                      ....+|+|||||||+|||++++.+|+ ..|++|+++.+..+.            ...+.+++.+.+              
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G--------------  111 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG--------------  111 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT--------------
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC--------------
Confidence            34568999999999999999999999 689999998876432            334556666665              


Q ss_pred             hhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC-------------c-----------
Q psy3252         161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-------------L-----------  216 (475)
Q Consensus       161 ~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~-------------~-----------  216 (475)
                                .+...+.||++ +.++++++++++.+++|+||+||||+|......             +           
T Consensus       112 ----------~~a~~i~~Dv~-d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt  180 (401)
T 4ggo_A          112 ----------LYSVTIDGDAF-SDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDP  180 (401)
T ss_dssp             ----------CCEEEEESCTT-SHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECT
T ss_pred             ----------CCceeEeCCCC-CHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccc
Confidence                      56889999999 999999999999999999999999999763211             0           


Q ss_pred             ----------ccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-
Q psy3252         217 ----------EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANL-  285 (475)
Q Consensus       217 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-  285 (475)
                                ...+.++++..                  -++|.....+.+...+...+.|.+  ++++|.+|++.+.. 
T Consensus       181 ~~~~i~~~~l~pat~eeie~T------------------~~vMg~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t  240 (401)
T 4ggo_A          181 FTGELKEISAEPANDEEAAAT------------------VKVMGGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEAT  240 (401)
T ss_dssp             TTCCEEEEEECCCCHHHHHHH------------------HHHHSSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGG
T ss_pred             cccccccccccCCcHHHHHHH------------------HHHHhhhHHHHHHHHHHhhhcccC--CceEEEEeccCccee
Confidence                      01122333322                  234677777777777777777754  48999999988865 


Q ss_pred             -cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         286 -GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       286 -~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                       |.++...++++|++|+..++.|+.||++  +++|++++|.+.|......
T Consensus       241 ~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT~AssaI  288 (401)
T 4ggo_A          241 QALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVTRASAVI  288 (401)
T ss_dssp             HHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCCTTGGGS
T ss_pred             ecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccccchhhcC
Confidence             4445668999999999999999999985  8999999999999955543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.85  E-value=6.3e-21  Score=180.03  Aligned_cols=148  Identities=16%  Similarity=0.219  Sum_probs=123.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||+|+||++++++|+++|++|++++|+.++++..                                ..+.++.+|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------------------------------~~~~~~~~D   49 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------------------------------NNVKAVHFD   49 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------------------------------TTEEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------------------------------CCceEEEec
Confidence            689999999999999999999999999999997643211                                347889999


Q ss_pred             cCCC-HHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         180 ISKD-YENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       180 vt~d-~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      ++ | .+++.++++       .+|+||||||.....            .                     +++|+.++.+
T Consensus        50 ~~-d~~~~~~~~~~-------~~d~vi~~ag~~~~~------------~---------------------~~~n~~~~~~   88 (219)
T 3dqp_A           50 VD-WTPEEMAKQLH-------GMDAIINVSGSGGKS------------L---------------------LKVDLYGAVK   88 (219)
T ss_dssp             TT-SCHHHHHTTTT-------TCSEEEECCCCTTSS------------C---------------------CCCCCHHHHH
T ss_pred             cc-CCHHHHHHHHc-------CCCEEEECCcCCCCC------------c---------------------EeEeHHHHHH
Confidence            99 8 887777654       699999999976411            2                     8999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCC-------ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYG-------LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~-------~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +++++    ++.+.++||++||..+..+.+.       ...|+.+|++++.+.+      ...|+++++|+||.+.++.
T Consensus        89 l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~  157 (219)
T 3dqp_A           89 LMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEE  157 (219)
T ss_dssp             HHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSC
T ss_pred             HHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCC
Confidence            88887    3445679999999988776666       7899999999998876      4689999999999999873

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.85  E-value=7.7e-21  Score=192.33  Aligned_cols=177  Identities=15%  Similarity=0.098  Sum_probs=138.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++++||||||+|+||.+++++|+++|++|++++|+.+..+.+.+.+.. .                        .++.+
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~------------------------~~~~~   61 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV-A------------------------DGMQS   61 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT-T------------------------TTSEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc-C------------------------CceEE
Confidence            4578999999999999999999999999999999987654433332210 0                        35678


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++.++++.+     ++|+||||||...    .+.+.++++..                     +++|+.|
T Consensus        62 ~~~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~----~~~~~~~~~~~---------------------~~~n~~~  110 (357)
T 1rkx_A           62 EIGDIR-DQNKLLESIREF-----QPEIVFHMAAQPL----VRLSYSEPVET---------------------YSTNVMG  110 (357)
T ss_dssp             EECCTT-CHHHHHHHHHHH-----CCSEEEECCSCCC----HHHHHHCHHHH---------------------HHHHTHH
T ss_pred             EEcccc-CHHHHHHHHHhc-----CCCEEEECCCCcc----cccchhCHHHH---------------------HHHHHHH
Confidence            999999 999998888765     7999999999631    11223334444                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccc------------cCCCChhhHHHHHHHHHHHHHHHHHHc------cCCcE
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANL------------GIYGLAAYTSSKFALKGFAEALYMEVK------QSGLT  317 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~------------~~~~~~~Y~aSKaAl~~l~~sLa~El~------~~gIr  317 (475)
                      +.++++++.+.   .+.++||++||...+-            +......|+.||++++.+++.++.++.      +.|++
T Consensus       111 ~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~  187 (357)
T 1rkx_A          111 TVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTA  187 (357)
T ss_dssp             HHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCE
T ss_pred             HHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCce
Confidence            99999998763   2357999999986432            223457899999999999999999985      45899


Q ss_pred             EEEEeCCCCCCCCC
Q psy3252         318 ITLCLPPDTDTPGF  331 (475)
Q Consensus       318 Vn~V~PG~v~T~~~  331 (475)
                      +++|+||.|.+|..
T Consensus       188 ~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          188 VATVRAGNVIGGGD  201 (357)
T ss_dssp             EEEEECCCEECTTC
T ss_pred             EEEEeeceeeCCCC
Confidence            99999999999853

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.84  E-value=3.1e-20  Score=186.48  Aligned_cols=172  Identities=15%  Similarity=0.118  Sum_probs=134.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ++||||||+|+||.+++++|+++|++|++++|+. ...+...+.+...                         .++.++.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-------------------------~~~~~~~   56 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-------------------------GNFEFVH   56 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-------------------------CCCEEEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-------------------------CceEEEE
Confidence            5799999999999999999999999999999853 2222223333321                         3467889


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++..     ++|+||||||....    +.+.++++..                     +++|+.|+.
T Consensus        57 ~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~---------------------~~~nv~~~~  105 (347)
T 1orr_A           57 GDIR-NKNDVTRLITKY-----MPDSCFHLAGQVAM----TTSIDNPCMD---------------------FEINVGGTL  105 (347)
T ss_dssp             CCTT-CHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHHHCHHHH---------------------HHHHHHHHH
T ss_pred             cCCC-CHHHHHHHHhcc-----CCCEEEECCcccCh----hhhhhCHHHH---------------------HHHHHHHHH
Confidence            9999 999998888752     69999999996421    1122334444                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccc---------------------------cCCCChhhHHHHHHHHHHHHHHHHH
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANL---------------------------GIYGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~---------------------------~~~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                      ++++++.+.+.   .++||++||.+.+.                           +......|+.||++.+.+++.++.+
T Consensus       106 ~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~  182 (347)
T 1orr_A          106 NLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI  182 (347)
T ss_dssp             HHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            99999987653   26899999976542                           1234678999999999999999988


Q ss_pred             HccCCcEEEEEeCCCCCCCCCc
Q psy3252         311 VKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +   |+++++|+||.|.+++..
T Consensus       183 ~---gi~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          183 F---GLNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             H---CCEEEEEEECCEECTTCC
T ss_pred             h---CCcEEEEccCceeCcCCC
Confidence            5   899999999999999653

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.84  E-value=3.8e-21  Score=192.92  Aligned_cols=167  Identities=14%  Similarity=0.081  Sum_probs=123.8

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ....++++++||||||+|+||.+++++|+++|++|++++|+.....++.+.+                            
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----------------------------   64 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----------------------------   64 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----------------------------
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----------------------------
Confidence            3446678899999999999999999999999999999999754321110000                            


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.+++.++++++     ++|+||||||.....     +.++++                       ++
T Consensus        65 ~~v~~~~~Dl~-d~~~~~~~~~~~-----~~D~vih~A~~~~~~-----~~~~~~-----------------------~~  110 (330)
T 2pzm_A           65 AGLSVIEGSVT-DAGLLERAFDSF-----KPTHVVHSAAAYKDP-----DDWAED-----------------------AA  110 (330)
T ss_dssp             TTEEEEECCTT-CHHHHHHHHHHH-----CCSEEEECCCCCSCT-----TCHHHH-----------------------HH
T ss_pred             CCceEEEeeCC-CHHHHHHHHhhc-----CCCEEEECCccCCCc-----cccChh-----------------------HH
Confidence            34778999999 999998888765     799999999976431     222222                       67


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC-----C------CChhhHHHHHHHHHHHHHHHHHHccCCcE-E
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI-----Y------GLAAYTSSKFALKGFAEALYMEVKQSGLT-I  318 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----~------~~~~Y~aSKaAl~~l~~sLa~El~~~gIr-V  318 (475)
                      +|+.+++++++++..    .+.++||++||.+.+...     +      ....|++||++++.+++.+  ++....|| +
T Consensus       111 ~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~  184 (330)
T 2pzm_A          111 TNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLA  184 (330)
T ss_dssp             HHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeee
Confidence            999999999999873    345799999998775433     2      5679999999999999887  33333444 4


Q ss_pred             EEEeCCC
Q psy3252         319 TLCLPPD  325 (475)
Q Consensus       319 n~V~PG~  325 (475)
                      +.+.||.
T Consensus       185 ~v~gp~~  191 (330)
T 2pzm_A          185 NVTGPRL  191 (330)
T ss_dssp             EEECTTC
T ss_pred             eeECcCC
Confidence            4444553

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.84  E-value=2.4e-20  Score=188.51  Aligned_cols=176  Identities=14%  Similarity=0.090  Sum_probs=135.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh----HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK----KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~----~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      +++++++||||||+|+||.+++++|+++|++|++++|+..    .++.+.+++....                       
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------------------   79 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ-----------------------   79 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH-----------------------
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccccc-----------------------
Confidence            4466789999999999999999999999999999999753    3333322221100                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ..++.++.+|++ |.+++.++++       ++|+||||||.....    .+.++++..                     +
T Consensus        80 ~~~~~~~~~Dl~-d~~~~~~~~~-------~~d~vih~A~~~~~~----~~~~~~~~~---------------------~  126 (352)
T 1sb8_A           80 WSNFKFIQGDIR-NLDDCNNACA-------GVDYVLHQAALGSVP----RSINDPITS---------------------N  126 (352)
T ss_dssp             HTTEEEEECCTT-SHHHHHHHHT-------TCSEEEECCSCCCHH----HHHHCHHHH---------------------H
T ss_pred             CCceEEEECCCC-CHHHHHHHhc-------CCCEEEECCcccCch----hhhhCHHHH---------------------H
Confidence            035788999999 9888877765       799999999975321    122334444                     8


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC-----------CChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                      ++|+.++.++++++.+    .+.++||++||...+.+.+           ....|+.||++.+.+++.++.++   |+++
T Consensus       127 ~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~  199 (352)
T 1sb8_A          127 ATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFST  199 (352)
T ss_dssp             HHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCC
T ss_pred             HHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCE
Confidence            9999999999998864    3557999999987764432           35689999999999999998885   7999


Q ss_pred             EEEeCCCCCCCCCc
Q psy3252         319 TLCLPPDTDTPGFE  332 (475)
Q Consensus       319 n~V~PG~v~T~~~~  332 (475)
                      ++|+||.|.+|...
T Consensus       200 ~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          200 IGLRYFNVFGRRQD  213 (352)
T ss_dssp             EEEEECCEECTTCC
T ss_pred             EEEEECceeCcCCC
Confidence            99999999998643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=1.4e-20  Score=178.18  Aligned_cols=155  Identities=14%  Similarity=0.145  Sum_probs=124.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +++|||||+|+||.+++++|+++|++|++++|+.++++..                               ...+.++.+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------------------~~~~~~~~~   53 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------------------------------NEHLKVKKA   53 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------------------------------CTTEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------------------------------cCceEEEEe
Confidence            6899999999999999999999999999999997653211                               045789999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+++.++++       .+|+||||||.....       .   ..                     +++|+.++.+
T Consensus        54 Dl~-d~~~~~~~~~-------~~d~vi~~a~~~~~~-------~---~~---------------------~~~n~~~~~~   94 (227)
T 3dhn_A           54 DVS-SLDEVCEVCK-------GADAVISAFNPGWNN-------P---DI---------------------YDETIKVYLT   94 (227)
T ss_dssp             CTT-CHHHHHHHHT-------TCSEEEECCCC----------------C---------------------CSHHHHHHHH
T ss_pred             cCC-CHHHHHHHhc-------CCCEEEEeCcCCCCC-------h---hH---------------------HHHHHHHHHH
Confidence            999 9988887765       689999999864210       1   13                     8999999998


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCC----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIY----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++++..    .+.++||++||..+..+.+          ....|+.+|++.+.+.+.++.   ..|+++++++||.+.+
T Consensus        95 l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g  167 (227)
T 3dhn_A           95 IIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMR  167 (227)
T ss_dssp             HHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEE
T ss_pred             HHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccC
Confidence            8887643    4556899999987665443          257899999999988887765   4699999999999998


Q ss_pred             CC
Q psy3252         329 PG  330 (475)
Q Consensus       329 ~~  330 (475)
                      +.
T Consensus       168 ~~  169 (227)
T 3dhn_A          168 PG  169 (227)
T ss_dssp             SC
T ss_pred             CC
Confidence            84

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.84  E-value=7.2e-20  Score=172.70  Aligned_cols=149  Identities=15%  Similarity=0.120  Sum_probs=114.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|+||++++++|+++|++|++++|+.++++++..                              ..+.++.+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~------------------------------~~~~~~~~D   51 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG------------------------------ATVATLVKE   51 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC------------------------------TTSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC------------------------------CCceEEecc
Confidence            58999999999999999999999999999999876653311                              346789999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.++         +.++.+|+||||||.....       +    .                     .++|+.++.++
T Consensus        52 ~~-d~~~---------~~~~~~d~vi~~ag~~~~~-------~----~---------------------~~~n~~~~~~l   89 (224)
T 3h2s_A           52 PL-VLTE---------ADLDSVDAVVDALSVPWGS-------G----R---------------------GYLHLDFATHL   89 (224)
T ss_dssp             GG-GCCH---------HHHTTCSEEEECCCCCTTS-------S----C---------------------THHHHHHHHHH
T ss_pred             cc-cccH---------hhcccCCEEEECCccCCCc-------c----h---------------------hhHHHHHHHHH
Confidence            99 7665         2235799999999976210       0    1                     55677776554


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCC--------------ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYG--------------LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~--------------~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                          ++.+++.+ ++||++||.++..+.+.              ...|+.+|++.+.+    .......|++++.|+||.
T Consensus        90 ----~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~  160 (224)
T 3h2s_A           90 ----VSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY----QFLQMNANVNWIGISPSE  160 (224)
T ss_dssp             ----HHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH----HHHTTCTTSCEEEEEECS
T ss_pred             ----HHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH----HHHHhcCCCcEEEEcCcc
Confidence                55566666 99999999877665544              67899999988854    222346899999999999


Q ss_pred             CCCC
Q psy3252         326 TDTP  329 (475)
Q Consensus       326 v~T~  329 (475)
                      +.++
T Consensus       161 v~g~  164 (224)
T 3h2s_A          161 AFPS  164 (224)
T ss_dssp             BCCC
T ss_pred             ccCC
Confidence            9988

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.83  E-value=4.5e-20  Score=183.62  Aligned_cols=166  Identities=19%  Similarity=0.164  Sum_probs=131.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .+.+++|||||+|+||.+++++|+++|++|++++|+... +.    +                             .+.+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----------------------------~~~~   55 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----------------------------NVEM   55 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----------------------------TEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----------------------------eeeE
Confidence            456799999999999999999999999999999998642 10    0                             3678


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++.++++.     +++|+||||||.....    .+.++++..                     +++|+.|
T Consensus        56 ~~~Dl~-d~~~~~~~~~~-----~~~d~vih~A~~~~~~----~~~~~~~~~---------------------~~~Nv~g  104 (321)
T 2pk3_A           56 ISLDIM-DSQRVKKVISD-----IKPDYIFHLAAKSSVK----DSWLNKKGT---------------------FSTNVFG  104 (321)
T ss_dssp             EECCTT-CHHHHHHHHHH-----HCCSEEEECCSCCCHH----HHTTCHHHH---------------------HHHHHHH
T ss_pred             EECCCC-CHHHHHHHHHh-----cCCCEEEEcCcccchh----hhhhcHHHH---------------------HHHHHHH
Confidence            899999 99999888775     3799999999975321    111233434                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccC-------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGI-------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      +.++++++ +.+  .+.++||++||.+.+.+.             +....|+.||++++.+++.++.+   +|++++++.
T Consensus       105 ~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilr  178 (321)
T 2pk3_A          105 TLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKA---YGMDIIHTR  178 (321)
T ss_dssp             HHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEE
T ss_pred             HHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH---cCCCEEEEE
Confidence            99999998 554  245899999998765332             35678999999999999999987   489999999


Q ss_pred             CCCCCCCCCc
Q psy3252         323 PPDTDTPGFE  332 (475)
Q Consensus       323 PG~v~T~~~~  332 (475)
                      ||.|.+|+..
T Consensus       179 p~~v~g~~~~  188 (321)
T 2pk3_A          179 TFNHIGPGQS  188 (321)
T ss_dssp             ECEEECTTCC
T ss_pred             eCcccCcCCC
Confidence            9999999654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.83  E-value=2.4e-19  Score=184.02  Aligned_cols=179  Identities=17%  Similarity=0.064  Sum_probs=133.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH----------------HHHHHHHhCCCCcchhhhhHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ----------------AQEEIKKACPNPKFIRFIEYE  158 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~----------------~~~~l~~~~~~~~~~~~~~~~  158 (475)
                      ..++.+||||||+|.||.+++++|+++|++|++++|+......                ...++.....           
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----------   76 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG-----------   76 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC-----------
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC-----------
Confidence            3457799999999999999999999999999999987543211                1111111100           


Q ss_pred             HhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccc
Q psy3252         159 EIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHT  238 (475)
Q Consensus       159 ~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (475)
                                  .++.++.+|++ |.+++.++++..     ++|+||||||....... ..+++++...           
T Consensus        77 ------------~~v~~~~~Dl~-d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-~~~~~~~~~~-----------  126 (404)
T 1i24_A           77 ------------KSIELYVGDIC-DFEFLAESFKSF-----EPDSVVHFGEQRSAPYS-MIDRSRAVYT-----------  126 (404)
T ss_dssp             ------------CCCEEEESCTT-SHHHHHHHHHHH-----CCSEEEECCSCCCHHHH-TSCHHHHHHH-----------
T ss_pred             ------------CceEEEECCCC-CHHHHHHHHhcc-----CCCEEEECCCCCCccch-hhCccchhhh-----------
Confidence                        35778999999 999998888765     69999999997532211 1244444445           


Q ss_pred             hhhccccchhhhhhHHHHHHHHHHHHHHHHhCCC-CeEEEeccccccc------------------------cCCCChhh
Q psy3252         239 RLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGR-GCIVITASQAANL------------------------GIYGLAAY  293 (475)
Q Consensus       239 ~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~-g~IV~iSS~a~~~------------------------~~~~~~~Y  293 (475)
                                +++|+.|+.++++++.+.    +. .+||++||.+.+.                        +......|
T Consensus       127 ----------~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y  192 (404)
T 1i24_A          127 ----------QHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY  192 (404)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHH
T ss_pred             ----------HHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChh
Confidence                      899999999999998653    33 4899999976542                        22345689


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         294 TSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       294 ~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.||++++.+++.++.++   |+++++|+||.|.+|..
T Consensus       193 ~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          193 HLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             HHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence            999999999999998876   89999999999999864

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.82  E-value=1.1e-20  Score=183.66  Aligned_cols=153  Identities=16%  Similarity=0.141  Sum_probs=122.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||+|+||.+++++|+++|++|++++|+..+..          .                       ..+.++.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~-----------------------~~~~~~~   48 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------E-----------------------AHEEIVA   48 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------C-----------------------TTEEECC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------C-----------------------CCccEEE
Confidence            368999999999999999999999999999999864210          0                       2357889


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++       .+|+||||||...        .++++..                     +++|+.++.
T Consensus        49 ~Dl~-d~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~---------------------~~~n~~~~~   91 (267)
T 3ay3_A           49 CDLA-DAQAVHDLVK-------DCDGIIHLGGVSV--------ERPWNDI---------------------LQANIIGAY   91 (267)
T ss_dssp             CCTT-CHHHHHHHHT-------TCSEEEECCSCCS--------CCCHHHH---------------------HHHTHHHHH
T ss_pred             ccCC-CHHHHHHHHc-------CCCEEEECCcCCC--------CCCHHHH---------------------HHHHHHHHH
Confidence            9999 9888877765       5999999999751        1223444                     899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCC------------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIY------------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      ++++++.+    .+.++||++||...+...+            ....|+.||++++.+++.++.   .+||++++|+||.
T Consensus        92 ~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~  164 (267)
T 3ay3_A           92 NLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH---KFDIETLNIRIGS  164 (267)
T ss_dssp             HHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECB
T ss_pred             HHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH---HcCCCEEEEecee
Confidence            99998754    3557999999987654322            347899999999999988864   4789999999999


Q ss_pred             CC
Q psy3252         326 TD  327 (475)
Q Consensus       326 v~  327 (475)
                      +.
T Consensus       165 v~  166 (267)
T 3ay3_A          165 CF  166 (267)
T ss_dssp             CS
T ss_pred             ec
Confidence            85

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.82  E-value=2e-19  Score=184.39  Aligned_cols=180  Identities=16%  Similarity=0.157  Sum_probs=132.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHH-HcCCEEEEEecChhH---------HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCC
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAA-KRGAHVTIVARDEKK---------LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNP  167 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La-~~Ga~Vvl~~R~~~~---------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
                      +++||||||+|+||.+++++|+ ++|++|++++|+...         .+.+.+.+.+.....               + .
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~   65 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK---------------P-P   65 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSC---------------C-T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccc---------------c-c
Confidence            3489999999999999999999 999999999997544         333333333321100               0 0


Q ss_pred             CccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         168 KFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       168 ~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                      ....++.++.+|++ |.+++.+++++    ++++|+||||||......    +.++++..                    
T Consensus        66 ~~~~~~~~~~~Dl~-d~~~~~~~~~~----~~~~d~vih~A~~~~~~~----~~~~~~~~--------------------  116 (397)
T 1gy8_A           66 WADRYAALEVGDVR-NEDFLNGVFTR----HGPIDAVVHMCAFLAVGE----SVRDPLKY--------------------  116 (397)
T ss_dssp             TTTCCCEEEESCTT-CHHHHHHHHHH----SCCCCEEEECCCCCCHHH----HHHCHHHH--------------------
T ss_pred             cCCceEEEEECCCC-CHHHHHHHHHh----cCCCCEEEECCCccCcCc----chhhHHHH--------------------
Confidence            00012778999999 98888777653    567999999999753211    22334444                    


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC------------------CChhhHHHHHHHHHHHHHHHH
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY------------------GLAAYTSSKFALKGFAEALYM  309 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~------------------~~~~Y~aSKaAl~~l~~sLa~  309 (475)
                       +++|+.+++++++++.    +.+.++||++||.+.+-...                  ....|++||++++.+++.++.
T Consensus       117 -~~~Nv~g~~~ll~a~~----~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~  191 (397)
T 1gy8_A          117 -YDNNVVGILRLLQAML----LHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAE  191 (397)
T ss_dssp             -HHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHH
T ss_pred             -HHHHhHHHHHHHHHHH----HhCCCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHH
Confidence             9999999999999864    34567999999965542211                  157899999999999999998


Q ss_pred             HHccCCcEEEEEeCCCCCCCC
Q psy3252         310 EVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       310 El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++   |+++++|+||.|.+|.
T Consensus       192 ~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          192 AY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             HH---CCEEEEEEECEEECCC
T ss_pred             HH---CCcEEEEeccceeCCC
Confidence            86   8999999999999884

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.82  E-value=9.9e-20  Score=182.57  Aligned_cols=159  Identities=17%  Similarity=0.110  Sum_probs=122.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +||||||+|+||.+++++|+++|++|++++|+.++.+.+    ..                          ..++++.+|
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--------------------------~~~~~~~~D   64 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--------------------------LEPECRVAE   64 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--------------------------GCCEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--------------------------CCeEEEEec
Confidence            799999999999999999999999999999986543221    00                          246788999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++       ++|+||||||...      ...++.+..                     +++|+.++.++
T Consensus        65 l~-d~~~~~~~~~-------~~d~vih~a~~~~------~~~~~~~~~---------------------~~~n~~~~~~l  109 (342)
T 2x4g_A           65 ML-DHAGLERALR-------GLDGVIFSAGYYP------SRPRRWQEE---------------------VASALGQTNPF  109 (342)
T ss_dssp             TT-CHHHHHHHTT-------TCSEEEEC------------------CH---------------------HHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHc-------CCCEEEECCccCc------CCCCCHHHH---------------------HHHHHHHHHHH
Confidence            99 9888777664       6999999999642      122334434                     89999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCC----------------ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYG----------------LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~----------------~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                      ++++.+.    +.++||++||...+.+.++                ...|+.||++.+.+++.++.   . |+++++|.|
T Consensus       110 ~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp  181 (342)
T 2x4g_A          110 YAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIP  181 (342)
T ss_dssp             HHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEE
T ss_pred             HHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeC
Confidence            9998764    4478999999887654443                67899999999999999876   3 899999999


Q ss_pred             CCCCCCCC
Q psy3252         324 PDTDTPGF  331 (475)
Q Consensus       324 G~v~T~~~  331 (475)
                      |.|.++..
T Consensus       182 ~~v~g~~~  189 (342)
T 2x4g_A          182 GMVLGELD  189 (342)
T ss_dssp             CEEECSCC
T ss_pred             CceECCCC
Confidence            99999854

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.82  E-value=1e-19  Score=182.12  Aligned_cols=169  Identities=15%  Similarity=0.142  Sum_probs=129.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CEEEEEecChh--HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEK--KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++||||||+|+||.+++++|+++|  ++|++++|+..  ..+.+ +++..                         ..++
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~-------------------------~~~~   56 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED-------------------------DPRY   56 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT-------------------------CTTE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc-------------------------CCce
Confidence            4579999999999999999999997  89999998642  11111 00000                         1457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.+++       +++|+||||||....    +.+.++++..                     +++|+
T Consensus        57 ~~~~~Dl~-d~~~~~~~~-------~~~d~vih~A~~~~~----~~~~~~~~~~---------------------~~~Nv  103 (336)
T 2hun_A           57 TFVKGDVA-DYELVKELV-------RKVDGVVHLAAESHV----DRSISSPEIF---------------------LHSNV  103 (336)
T ss_dssp             EEEECCTT-CHHHHHHHH-------HTCSEEEECCCCCCH----HHHHHCTHHH---------------------HHHHH
T ss_pred             EEEEcCCC-CHHHHHHHh-------hCCCEEEECCCCcCh----hhhhhCHHHH---------------------HHHHH
Confidence            88999999 988888776       279999999997531    1122233333                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccc-----------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANL-----------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      .|+.++++++.+.   ...++||++||.+.+.           +......|+.||++++.+++.++.++   |+++++|+
T Consensus       104 ~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilr  177 (336)
T 2hun_A          104 IGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITR  177 (336)
T ss_dssp             HHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEE
T ss_pred             HHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEe
Confidence            9999999999876   2237999999976432           23456789999999999999998874   89999999


Q ss_pred             CCCCCCCCC
Q psy3252         323 PPDTDTPGF  331 (475)
Q Consensus       323 PG~v~T~~~  331 (475)
                      ||.|.+|+.
T Consensus       178 p~~v~g~~~  186 (336)
T 2hun_A          178 CTNNYGPYQ  186 (336)
T ss_dssp             ECEEESTTC
T ss_pred             eeeeeCcCC
Confidence            999999963

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.82  E-value=1.4e-19  Score=182.37  Aligned_cols=179  Identities=15%  Similarity=0.062  Sum_probs=136.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.+++++||||||+|+||.+++++|+++|++|++++|+..........+.......                   ...++
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-------------------~~~~~   81 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTE-------------------QWSRF   81 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHH-------------------HHTTE
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccc-------------------cCCce
Confidence            45678999999999999999999999999999999997654444444444322100                   00357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++       ++|+|||+||.....    .+.++....                     +++|+
T Consensus        82 ~~~~~Dl~-d~~~~~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~---------------------~~~nv  128 (351)
T 3ruf_A           82 CFIEGDIR-DLTTCEQVMK-------GVDHVLHQAALGSVP----RSIVDPITT---------------------NATNI  128 (351)
T ss_dssp             EEEECCTT-CHHHHHHHTT-------TCSEEEECCCCCCHH----HHHHCHHHH---------------------HHHHT
T ss_pred             EEEEccCC-CHHHHHHHhc-------CCCEEEECCccCCcc----hhhhCHHHH---------------------HHHHH
Confidence            89999999 9888877765       799999999964321    112223333                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC-----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      .++.++++++..    .+.++||++||...+...+           ....|+.||.+.+.+++.++.+.   |++++++.
T Consensus       129 ~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilR  201 (351)
T 3ruf_A          129 TGFLNILHAAKN----AQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLR  201 (351)
T ss_dssp             HHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEE
T ss_pred             HHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEe
Confidence            999999988754    3456899999987654322           24689999999999999998874   89999999


Q ss_pred             CCCCCCCCC
Q psy3252         323 PPDTDTPGF  331 (475)
Q Consensus       323 PG~v~T~~~  331 (475)
                      ||.|.+|..
T Consensus       202 p~~v~G~~~  210 (351)
T 3ruf_A          202 YFNVFGRRQ  210 (351)
T ss_dssp             ECSEESTTC
T ss_pred             eCceeCcCC
Confidence            999999854

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.81  E-value=9.7e-20  Score=184.19  Aligned_cols=172  Identities=16%  Similarity=0.140  Sum_probs=132.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCEEEEEecChh--HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEK--KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +||||||+|+||.+++++|+++ |++|++++|+..  ..+.+ .++..                         ..++.++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~-------------------------~~~~~~~   55 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE-------------------------SNRYNFE   55 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT-------------------------CTTEEEE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc-------------------------CCCeEEE
Confidence            5899999999999999999998 799999998642  11111 00000                         1457889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.+++++.     ++|+||||||....    +.+.++++..                     +++|+.|+
T Consensus        56 ~~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~---------------------~~~Nv~g~  104 (361)
T 1kew_A           56 HADIC-DSAEITRIFEQY-----QPDAVMHLAAESHV----DRSITGPAAF---------------------IETNIVGT  104 (361)
T ss_dssp             ECCTT-CHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHCTHHH---------------------HHHHTHHH
T ss_pred             ECCCC-CHHHHHHHHhhc-----CCCEEEECCCCcCh----hhhhhCHHHH---------------------HHHHHHHH
Confidence            99999 999988888752     79999999997531    1122233333                     99999999


Q ss_pred             HHHHHHHHHHHHhCC-----CCeEEEeccccccc---------------------cCCCChhhHHHHHHHHHHHHHHHHH
Q psy3252         257 IHMTKALVEGMKQRG-----RGCIVITASQAANL---------------------GIYGLAAYTSSKFALKGFAEALYME  310 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~-----~g~IV~iSS~a~~~---------------------~~~~~~~Y~aSKaAl~~l~~sLa~E  310 (475)
                      +++++++.+.|..-+     .++||++||.+.+-                     +......|+.||++++.+++.++.+
T Consensus       105 ~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  184 (361)
T 1kew_A          105 YALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT  184 (361)
T ss_dssp             HHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            999999999875422     25999999975432                     1234678999999999999999988


Q ss_pred             HccCCcEEEEEeCCCCCCCCC
Q psy3252         311 VKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       311 l~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +   |+++++|+||.|.||+.
T Consensus       185 ~---gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          185 Y---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             H---CCCEEEEEECEEESTTC
T ss_pred             h---CCcEEEEeeceeECCCC
Confidence            5   79999999999999964

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.81  E-value=2.5e-19  Score=166.16  Aligned_cols=148  Identities=18%  Similarity=0.192  Sum_probs=116.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++++||||+|+||++++++|+++|++|++++|+.++++...                              ..++.++.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------------------------------~~~~~~~~   52 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG------------------------------PRPAHVVV   52 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS------------------------------CCCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc------------------------------CCceEEEE
Confidence            478999999999999999999999999999999976432100                              04577899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++       .+|++|||||....   .+        .                     .++|+.++.
T Consensus        53 ~D~~-~~~~~~~~~~-------~~d~vi~~a~~~~~---~~--------~---------------------~~~n~~~~~   92 (206)
T 1hdo_A           53 GDVL-QAADVDKTVA-------GQDAVIVLLGTRND---LS--------P---------------------TTVMSEGAR   92 (206)
T ss_dssp             SCTT-SHHHHHHHHT-------TCSEEEECCCCTTC---CS--------C---------------------CCHHHHHHH
T ss_pred             ecCC-CHHHHHHHHc-------CCCEEEECccCCCC---CC--------c---------------------cchHHHHHH
Confidence            9999 9888877764       58999999996532   00        1                     457888888


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCC----CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIY----GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++++++..    .+.++||++||...+...+    ....|+.+|++++.+.+       ..|+++++|+||.+
T Consensus        93 ~~~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~-------~~~i~~~~lrp~~~  154 (206)
T 1hdo_A           93 NIVAAMKA----HGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR-------ESGLKYVAVMPPHI  154 (206)
T ss_dssp             HHHHHHHH----HTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHH-------HTCSEEEEECCSEE
T ss_pred             HHHHHHHH----hCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHH-------hCCCCEEEEeCCcc
Confidence            88877653    3457899999987655443    46789999999998874       36899999999998

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.81  E-value=3.8e-20  Score=183.43  Aligned_cols=233  Identities=13%  Similarity=0.058  Sum_probs=156.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++||||||+|+||.+++++|+++|++|++++|+.+...+..                              ...+.++.+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------------------------~~~~~~~~~   50 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------------------------------NPSAELHVR   50 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------------------------------CTTSEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------------------------------CCCceEEEC
Confidence            37999999999999999999999999999999765322110                              034678899


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+ +.++++       . |+||||||....    +.+.++++..                     +++|+.++.+
T Consensus        51 Dl~-d~~-~~~~~~-------~-d~vih~A~~~~~----~~~~~~~~~~---------------------~~~n~~~~~~   95 (312)
T 3ko8_A           51 DLK-DYS-WGAGIK-------G-DVVFHFAANPEV----RLSTTEPIVH---------------------FNENVVATFN   95 (312)
T ss_dssp             CTT-STT-TTTTCC-------C-SEEEECCSSCSS----SGGGSCHHHH---------------------HHHHHHHHHH
T ss_pred             ccc-cHH-HHhhcC-------C-CEEEECCCCCCc----hhhhhCHHHH---------------------HHHHHHHHHH
Confidence            999 765 554432       3 999999996432    2233334444                     8999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++++..    .+.++||++||...+-.           ......|+.||++.+.+++.++.++   |+++++|+||.|.
T Consensus        96 l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~  168 (312)
T 3ko8_A           96 VLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVV  168 (312)
T ss_dssp             HHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEE
T ss_pred             HHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeecccc
Confidence            9998743    34578999999876532           2346789999999999999999886   8999999999999


Q ss_pred             CCCCcccccCCcc-----ccccc------cccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCC
Q psy3252         328 TPGFENEEKSKPR-----ETSLI------SQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGG  396 (475)
Q Consensus       328 T~~~~~~~~~~~~-----~~~~~------~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  396 (475)
                      +|...........     .....      ........++|++++.+.++..........           ....+. ...
T Consensus       169 g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~-----------~~~ni~-~~~  236 (312)
T 3ko8_A          169 GPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF-----------LALNVG-NVD  236 (312)
T ss_dssp             CTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSE-----------EEEEES-CSS
T ss_pred             CcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCC-----------cEEEEc-CCC
Confidence            9964421000000     00000      011234558899888766554310001100           111121 123


Q ss_pred             CCChHHHHHHHHHHHhcCC
Q psy3252         397 LYRPEVVAKQLLEDALKGN  415 (475)
Q Consensus       397 ~~~~e~vA~~i~~ai~~g~  415 (475)
                      .++..++++.+.+.+....
T Consensus       237 ~~s~~e~~~~i~~~~g~~~  255 (312)
T 3ko8_A          237 AVRVLDIAQIVAEVLGLRP  255 (312)
T ss_dssp             CEEHHHHHHHHHHHHTCCC
T ss_pred             ceeHHHHHHHHHHHhCCCC
Confidence            5788999999888876543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.81  E-value=1.8e-19  Score=180.78  Aligned_cols=175  Identities=18%  Similarity=0.141  Sum_probs=127.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .++|+||||||+|+||.+++++|+++|++|+++.|+.+..+++.. +... ..                    ...++.+
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~-~~--------------------~~~~~~~   60 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDL-PK--------------------AETHLTL   60 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTS-TT--------------------HHHHEEE
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhc-cc--------------------CCCeEEE
Confidence            467899999999999999999999999999999998764433221 1110 00                    0035788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++.++++       .+|+|||+||...   ....+  ..+..                     +++|+.|
T Consensus        61 ~~~Dl~-d~~~~~~~~~-------~~d~Vih~A~~~~---~~~~~--~~~~~---------------------~~~nv~g  106 (337)
T 2c29_D           61 WKADLA-DEGSFDEAIK-------GCTGVFHVATPMD---FESKD--PENEV---------------------IKPTIEG  106 (337)
T ss_dssp             EECCTT-STTTTHHHHT-------TCSEEEECCCCCC---SSCSS--HHHHT---------------------HHHHHHH
T ss_pred             EEcCCC-CHHHHHHHHc-------CCCEEEEeccccC---CCCCC--hHHHH---------------------HHHHHHH
Confidence            999999 8887777664       5899999998541   11112  22233                     8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCC----------------------CChhhHHHHHHHHHHHHHHHHHHcc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIY----------------------GLAAYTSSKFALKGFAEALYMEVKQ  313 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----------------------~~~~Y~aSKaAl~~l~~sLa~El~~  313 (475)
                      +.++++++.+..   +.++||++||.++..+.+                      ....|++||++.+.+++.++.+   
T Consensus       107 t~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---  180 (337)
T 2c29_D          107 MLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---  180 (337)
T ss_dssp             HHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---
Confidence            999999987642   247899999987654321                      2346999999999888776654   


Q ss_pred             CCcEEEEEeCCCCCCCCCc
Q psy3252         314 SGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       314 ~gIrVn~V~PG~v~T~~~~  332 (475)
                      +||++++|+||.|.+|+..
T Consensus       181 ~gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          181 NNIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             HTCCEEEEEECEEESCCSC
T ss_pred             cCCcEEEEeCCceECCCCC
Confidence            5899999999999999643

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.81  E-value=2.7e-20  Score=188.98  Aligned_cols=178  Identities=15%  Similarity=0.097  Sum_probs=126.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHH--cCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAK--RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~--~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +++++++||||||+|+||.+++++|++  .|++|++++|+........... +....  .              ......
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~--------------~~~~~~   68 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRP-SSLGH--F--------------KNLIGF   68 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------C-CCCCC--G--------------GGGTTC
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccch-hhhhh--h--------------hhcccc
Confidence            567899999999999999999999999  9999999999764211100000 00000  0              000013


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .+.++.+|++ |.+++.++      ...++|+||||||....      +.++++..                     +++
T Consensus        69 ~~~~~~~Dl~-d~~~~~~~------~~~~~D~vih~A~~~~~------~~~~~~~~---------------------~~~  114 (362)
T 3sxp_A           69 KGEVIAADIN-NPLDLRRL------EKLHFDYLFHQAAVSDT------TMLNQELV---------------------MKT  114 (362)
T ss_dssp             CSEEEECCTT-CHHHHHHH------TTSCCSEEEECCCCCGG------GCCCHHHH---------------------HHH
T ss_pred             CceEEECCCC-CHHHHHHh------hccCCCEEEECCccCCc------cccCHHHH---------------------HHH
Confidence            4678999999 98887776      24589999999996432      22334444                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      |+.|+.++++++..    . +++||++||...+-..          .....|+.||++.+.+++.++.+     ++++.|
T Consensus       115 Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~l  184 (362)
T 3sxp_A          115 NYQAFLNLLEIARS----K-KAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGL  184 (362)
T ss_dssp             HTHHHHHHHHHHHH----T-TCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEE
T ss_pred             HHHHHHHHHHHHHH----c-CCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEE
Confidence            99999999998832    2 3569999996544221          12356999999999999887665     788889


Q ss_pred             eCCCCCCCCCc
Q psy3252         322 LPPDTDTPGFE  332 (475)
Q Consensus       322 ~PG~v~T~~~~  332 (475)
                      .|+.|.+|...
T Consensus       185 R~~~v~Gp~~~  195 (362)
T 3sxp_A          185 RYFNVYGPREF  195 (362)
T ss_dssp             EECSEESTTCG
T ss_pred             EeCceeCcCCC
Confidence            99999888644

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.81  E-value=2.8e-19  Score=179.91  Aligned_cols=173  Identities=19%  Similarity=0.253  Sum_probs=130.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH------HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK------LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +|+||||||+|+||.+++++|+++|++|++++|+...      ..+..+++.+..+                       .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~-----------------------~   58 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG-----------------------R   58 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT-----------------------C
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccC-----------------------C
Confidence            5799999999999999999999999999999885432      2222233322111                       3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.+++.++++..     ++|+||||||......    +.++.+..                     +++
T Consensus        59 ~~~~~~~D~~-~~~~~~~~~~~~-----~~d~vih~A~~~~~~~----~~~~~~~~---------------------~~~  107 (348)
T 1ek6_A           59 SVEFEEMDIL-DQGALQRLFKKY-----SFMAVIHFAGLKAVGE----SVQKPLDY---------------------YRV  107 (348)
T ss_dssp             CCEEEECCTT-CHHHHHHHHHHC-----CEEEEEECCSCCCHHH----HHHCHHHH---------------------HHH
T ss_pred             ceEEEECCCC-CHHHHHHHHHhc-----CCCEEEECCCCcCccc----hhhchHHH---------------------HHH
Confidence            5678999999 988888877652     7999999999753211    12233334                     899


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                      |+.++.++++++.    +.+.++||++||...+..            .|....|+.||++++.+++.++.+  ..+++++
T Consensus       108 n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~  181 (348)
T 1ek6_A          108 NLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAV  181 (348)
T ss_dssp             HHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEE
T ss_pred             HHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceE
Confidence            9999999988753    445679999999766521            123678999999999999999887  4469999


Q ss_pred             EEeCCCCCCCC
Q psy3252         320 LCLPPDTDTPG  330 (475)
Q Consensus       320 ~V~PG~v~T~~  330 (475)
                      .+.|+.+.+|.
T Consensus       182 ~lR~~~v~G~~  192 (348)
T 1ek6_A          182 LLRYFNPTGAH  192 (348)
T ss_dssp             EEEECEEECCC
T ss_pred             EEeeccccCCC
Confidence            99999998873

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.80  E-value=3e-19  Score=177.38  Aligned_cols=228  Identities=14%  Similarity=0.070  Sum_probs=153.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+||||||+|+||.+++++|+++|..|++..++....+.+                               ...+.++.+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-------------------------------~~~~~~~~~   50 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-------------------------------NEAARLVKA   50 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-------------------------------CTTEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-------------------------------CCCcEEEEC
Confidence            4799999999999999999999995555544443221110                               045788999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ + +++.++++       .+|++||+||....    +.+.++++..                     +++|+.|+.+
T Consensus        51 Dl~-~-~~~~~~~~-------~~d~vih~a~~~~~----~~~~~~~~~~---------------------~~~nv~~~~~   96 (313)
T 3ehe_A           51 DLA-A-DDIKDYLK-------GAEEVWHIAANPDV----RIGAENPDEI---------------------YRNNVLATYR   96 (313)
T ss_dssp             CTT-T-SCCHHHHT-------TCSEEEECCCCCCC----C-CCCCHHHH---------------------HHHHHHHHHH
T ss_pred             cCC-h-HHHHHHhc-------CCCEEEECCCCCCh----hhhhhCHHHH---------------------HHHHHHHHHH
Confidence            999 8 77777664       79999999996422    2233444545                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccc-----------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANL-----------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++++.    +.+.++||++||...+-           +..+...|+.||++.+.+++.++.++   |++++++.||.|.
T Consensus        97 l~~~~~----~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~  169 (313)
T 3ehe_A           97 LLEAMR----KAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVI  169 (313)
T ss_dssp             HHHHHH----HHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEE
T ss_pred             HHHHHH----HcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeecccc
Confidence            998854    34567999999987652           33446789999999999999999884   8999999999999


Q ss_pred             CCCCcccc---------cCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCC
Q psy3252         328 TPGFENEE---------KSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGG  396 (475)
Q Consensus       328 T~~~~~~~---------~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  396 (475)
                      +|......         ......  .........+...+|++++.+.++.  +.  ...+           ...+. .+.
T Consensus       170 G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~--~~--~~~~-----------~~ni~-~~~  233 (313)
T 3ehe_A          170 GRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR--GD--ERVN-----------IFNIG-SED  233 (313)
T ss_dssp             STTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT--CC--SSEE-----------EEECC-CSC
T ss_pred             CcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc--cC--CCCc-----------eEEEC-CCC
Confidence            98543210         000000  0000112345677899988766543  11  1011           11121 123


Q ss_pred             CCChHHHHHHHHHHHhcC
Q psy3252         397 LYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       397 ~~~~e~vA~~i~~ai~~g  414 (475)
                      .++..++++.+.+.+...
T Consensus       234 ~~s~~e~~~~i~~~~g~~  251 (313)
T 3ehe_A          234 QIKVKRIAEIVCEELGLS  251 (313)
T ss_dssp             CEEHHHHHHHHHHHTTCC
T ss_pred             CeeHHHHHHHHHHHhCCC
Confidence            578899999888877653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.80  E-value=8.5e-20  Score=174.61  Aligned_cols=179  Identities=15%  Similarity=0.085  Sum_probs=122.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +..|++|||||+||||++++++|+++| ++|++++|+.++++++.                              ...+.
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~------------------------------~~~~~   70 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY------------------------------PTNSQ   70 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC------------------------------CTTEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc------------------------------cCCcE
Confidence            345799999999999999999999999 89999999976543210                              03578


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+++.++++       .+|+||||||..        .                            +.    
T Consensus        71 ~~~~Dl~-d~~~~~~~~~-------~~D~vv~~a~~~--------~----------------------------~~----  102 (236)
T 3qvo_A           71 IIMGDVL-NHAALKQAMQ-------GQDIVYANLTGE--------D----------------------------LD----  102 (236)
T ss_dssp             EEECCTT-CHHHHHHHHT-------TCSEEEEECCST--------T----------------------------HH----
T ss_pred             EEEecCC-CHHHHHHHhc-------CCCEEEEcCCCC--------c----------------------------hh----
Confidence            8999999 9998888775       689999999841        0                            11    


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChh---------hHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAA---------YTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~---------Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                         ..++.+++.|++.+.++||++||..++.+.++...         |...|...       ..++.+.||++++|+||.
T Consensus       103 ---~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~  172 (236)
T 3qvo_A          103 ---IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRA-------ADAIEASGLEYTILRPAW  172 (236)
T ss_dssp             ---HHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHH-------HHHHHTSCSEEEEEEECE
T ss_pred             ---HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHH-------HHHHHHCCCCEEEEeCCc
Confidence               23457788888888899999999887665543211         11122111       223457899999999999


Q ss_pred             CCCCCCcccccCCccccccccccCCCCChHHhhhccceeee
Q psy3252         326 TDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITL  366 (475)
Q Consensus       326 v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~  366 (475)
                      +.|+.......    ........+++..|+|||++.+.++.
T Consensus       173 i~~~~~~~~~~----~~~~~~~~~~~i~~~DvA~~i~~ll~  209 (236)
T 3qvo_A          173 LTDEDIIDYEL----TSRNEPFKGTIVSRKSVAALITDIID  209 (236)
T ss_dssp             EECCSCCCCEE----ECTTSCCSCSEEEHHHHHHHHHHHHH
T ss_pred             ccCCCCcceEE----eccCCCCCCcEECHHHHHHHHHHHHc
Confidence            99875432211    11111123677899999998766543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=9.3e-19  Score=178.32  Aligned_cols=174  Identities=11%  Similarity=0.050  Sum_probs=130.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-----HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-----LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     ++.+.+.+...                       ....+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-----------------------~~~~~   81 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-----------------------IEGNM   81 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC--------------------------------CE
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-----------------------cCCCc
Confidence            789999999999999999999999999999997542     11111100000                       01457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++.+     ++|+||||||.....    .+.++++..                     +++|+
T Consensus        82 ~~~~~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~~~----~~~~~~~~~---------------------~~~N~  130 (375)
T 1t2a_A           82 KLHYGDLT-DSTCLVKIINEV-----KPTEIYNLGAQSHVK----ISFDLAEYT---------------------ADVDG  130 (375)
T ss_dssp             EEEECCTT-CHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHHHSHHHH---------------------HHHHT
T ss_pred             eEEEccCC-CHHHHHHHHHhc-----CCCEEEECCCccccc----ccccCHHHH---------------------HHHHH
Confidence            88999999 999998888765     699999999975321    122334444                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      .|+.++++++.+.+.+ +.++||++||.+.+..           ......|+.||++++.+++.++.++   |+.+..+.
T Consensus       131 ~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r  206 (375)
T 1t2a_A          131 VGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGI  206 (375)
T ss_dssp             HHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEE
T ss_pred             HHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEe
Confidence            9999999999776542 2378999999876532           1245689999999999999998874   78888899


Q ss_pred             CCCCCCCC
Q psy3252         323 PPDTDTPG  330 (475)
Q Consensus       323 PG~v~T~~  330 (475)
                      |+.+.+|.
T Consensus       207 ~~~~~gp~  214 (375)
T 1t2a_A          207 LFNHESPR  214 (375)
T ss_dssp             ECCEECTT
T ss_pred             cccccCCC
Confidence            98887774

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.80  E-value=4.9e-19  Score=178.19  Aligned_cols=161  Identities=15%  Similarity=0.114  Sum_probs=123.3

Q ss_pred             cccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          90 MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        90 ~~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .+++.+.++|+||||||+|+||.+++++|+++|++|++++|+.+.                                   
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------------------------   55 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------------------------   55 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------------------------
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------------------------
Confidence            345567788999999999999999999999999999999998643                                   


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                       ..+.++.+|++ |.+++.++++       ++|+|||+||....      +.++++..                     +
T Consensus        56 -~~~~~~~~Dl~-d~~~~~~~~~-------~~d~vih~A~~~~~------~~~~~~~~---------------------~   99 (347)
T 4id9_A           56 -TGGEEVVGSLE-DGQALSDAIM-------GVSAVLHLGAFMSW------APADRDRM---------------------F   99 (347)
T ss_dssp             -SCCSEEESCTT-CHHHHHHHHT-------TCSEEEECCCCCCS------SGGGHHHH---------------------H
T ss_pred             -CCccEEecCcC-CHHHHHHHHh-------CCCEEEECCcccCc------chhhHHHH---------------------H
Confidence             12457899999 9888877765       79999999997532      22233444                     9


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc-------------CCCChhhHHHHHHHHHHHHHHHHHHccCCc
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG-------------IYGLAAYTSSKFALKGFAEALYMEVKQSGL  316 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gI  316 (475)
                      ++|+.++.++++++..    .+.++||++||...+-.             ......|+.||.+.+.+++.++.+   .|+
T Consensus       100 ~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~  172 (347)
T 4id9_A          100 AVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAM  172 (347)
T ss_dssp             HHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSS
T ss_pred             HHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCC
Confidence            9999999999988753    45579999999655422             234578999999999999998887   589


Q ss_pred             EEEEEeCCCCCC
Q psy3252         317 TITLCLPPDTDT  328 (475)
Q Consensus       317 rVn~V~PG~v~T  328 (475)
                      +++++.|+.|.+
T Consensus       173 ~~~ilRp~~v~~  184 (347)
T 4id9_A          173 ETVILRFSHTQD  184 (347)
T ss_dssp             EEEEEEECEEEC
T ss_pred             ceEEEccceEee
Confidence            999999999983

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.79  E-value=1.6e-18  Score=177.02  Aligned_cols=174  Identities=13%  Similarity=0.068  Sum_probs=129.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-----HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc-e
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-----LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR-F  172 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  172 (475)
                      |+||||||+|+||.+++++|+++|++|++++|+.+.     ++.+...+...                        .. .
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~------------------------~~~~   84 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV------------------------NKAL   84 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------------------------------CC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc------------------------cccc
Confidence            789999999999999999999999999999998643     21111111000                        02 5


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.+++.++++.+     ++|+||||||.....    .+.++++..                     +++|
T Consensus        85 ~~~~~~Dl~-d~~~~~~~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~---------------------~~~n  133 (381)
T 1n7h_A           85 MKLHYADLT-DASSLRRWIDVI-----KPDEVYNLAAQSHVA----VSFEIPDYT---------------------ADVV  133 (381)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHHHSHHHH---------------------HHHH
T ss_pred             eEEEECCCC-CHHHHHHHHHhc-----CCCEEEECCcccCcc----ccccCHHHH---------------------HHHH
Confidence            788999999 999998888765     799999999975321    122334444                     8999


Q ss_pred             HHHHHHHHHHHHHHHHhC-CCCeEEEeccccccc----------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         253 LYGTIHMTKALVEGMKQR-GRGCIVITASQAANL----------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~----------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      +.|+.++++++.+.+.++ +.++||++||...+.          +......|+.||++.+.+++.++.++   |+.+..+
T Consensus       134 v~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~  210 (381)
T 1n7h_A          134 ATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNG  210 (381)
T ss_dssp             THHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEE
T ss_pred             HHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEE
Confidence            999999999999987653 346999999987543          23346789999999999999998875   5666666


Q ss_pred             eCCCCCCCC
Q psy3252         322 LPPDTDTPG  330 (475)
Q Consensus       322 ~PG~v~T~~  330 (475)
                      .|+.+..|.
T Consensus       211 r~~~~~gp~  219 (381)
T 1n7h_A          211 ILFNHESPR  219 (381)
T ss_dssp             EECCEECTT
T ss_pred             EeCceeCCC
Confidence            666666553

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.79  E-value=7.8e-19  Score=164.86  Aligned_cols=148  Identities=18%  Similarity=0.212  Sum_probs=109.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +||||||+|+||++++++|+++|++|++++|+.++++.+.                               ..+.++.+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------------------------------~~~~~~~~D   50 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------------------------------KDINILQKD   50 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------------------------------SSSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------------------------------CCCeEEecc
Confidence            5899999999999999999999999999999987655331                               235688999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.++         +.+..+|+||||||....             .                     ..+|+.++..+
T Consensus        51 ~~-d~~~---------~~~~~~d~vi~~ag~~~~-------------~---------------------~~~~~~~~~~l   86 (221)
T 3ew7_A           51 IF-DLTL---------SDLSDQNVVVDAYGISPD-------------E---------------------AEKHVTSLDHL   86 (221)
T ss_dssp             GG-GCCH---------HHHTTCSEEEECCCSSTT-------------T---------------------TTSHHHHHHHH
T ss_pred             cc-Chhh---------hhhcCCCEEEECCcCCcc-------------c---------------------cchHHHHHHHH
Confidence            99 7665         223579999999997321             1                     45666665555


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCCC------------ChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIYG------------LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~------------~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +    +.+++.+.++||++||..+..+.++            ...|+.+|++.+.+. .+..  ...|++++.|+||.+.
T Consensus        87 ~----~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~  159 (221)
T 3ew7_A           87 I----SVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMF  159 (221)
T ss_dssp             H----HHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCC
T ss_pred             H----HHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCccee
Confidence            4    4556666789999999887655432            356999999988762 2221  1679999999999999


Q ss_pred             CC
Q psy3252         328 TP  329 (475)
Q Consensus       328 T~  329 (475)
                      ++
T Consensus       160 g~  161 (221)
T 3ew7_A          160 EP  161 (221)
T ss_dssp             CC
T ss_pred             cC
Confidence            88

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.79  E-value=1.2e-18  Score=176.89  Aligned_cols=178  Identities=13%  Similarity=0.096  Sum_probs=127.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH-HHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL-QAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|++|||||+|+||.+++++|+++|++|++++|+.+... +..+.+.....                    ....++.++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~   60 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH--------------------TCNPKFHLH   60 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------------------------CCEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccc--------------------cCCCceEEE
Confidence            468999999999999999999999999999999865421 11111111000                    001457889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++.+     ++|+||||||.....    .+.++++..                     +++|+.++
T Consensus        61 ~~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~~~----~~~~~~~~~---------------------~~~n~~~~  109 (372)
T 1db3_A           61 YGDLS-DTSNLTRILREV-----QPDEVYNLGAMSHVA----VSFESPEYT---------------------ADVDAMGT  109 (372)
T ss_dssp             CCCSS-CHHHHHHHHHHH-----CCSEEEECCCCCTTT----TTTSCHHHH---------------------HHHHTHHH
T ss_pred             ECCCC-CHHHHHHHHHhc-----CCCEEEECCcccCcc----ccccCHHHH---------------------HHHHHHHH
Confidence            99999 999999888765     699999999975432    222334444                     89999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      .++++++.+.+.+ +.++||++||.+.+...           .....|+.||++++.+++.++.++   |+.+..+.|..
T Consensus       110 ~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~  185 (372)
T 1db3_A          110 LRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFN  185 (372)
T ss_dssp             HHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECC
T ss_pred             HHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECC
Confidence            9999999776543 23799999997654321           235789999999999999999874   67777777777


Q ss_pred             CCCCC
Q psy3252         326 TDTPG  330 (475)
Q Consensus       326 v~T~~  330 (475)
                      +.+|.
T Consensus       186 ~~gp~  190 (372)
T 1db3_A          186 HESPR  190 (372)
T ss_dssp             EECTT
T ss_pred             ccCCC
Confidence            76664

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.79  E-value=9.2e-19  Score=179.11  Aligned_cols=170  Identities=16%  Similarity=0.084  Sum_probs=130.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +..++++||||||+|+||.+++++|+++|++|++++|+........                              ...+
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------------------------~~~v   74 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED------------------------------MFCD   74 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG------------------------------GTCS
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc------------------------------cCCc
Confidence            3445689999999999999999999999999999999864321100                              0346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++       ++|+||||||........   .++++..                     +++|+
T Consensus        75 ~~~~~Dl~-d~~~~~~~~~-------~~d~Vih~A~~~~~~~~~---~~~~~~~---------------------~~~Nv  122 (379)
T 2c5a_A           75 EFHLVDLR-VMENCLKVTE-------GVDHVFNLAADMGGMGFI---QSNHSVI---------------------MYNNT  122 (379)
T ss_dssp             EEEECCTT-SHHHHHHHHT-------TCSEEEECCCCCCCHHHH---TTCHHHH---------------------HHHHH
T ss_pred             eEEECCCC-CHHHHHHHhC-------CCCEEEECceecCccccc---ccCHHHH---------------------HHHHH
Confidence            78899999 9888887764       799999999975321110   1223333                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccc------------------cCCCChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANL------------------GIYGLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~------------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                      .++.++++++..    .+.++||++||...+.                  +......|+.||++.+.+++.++.+.   |
T Consensus       123 ~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g  195 (379)
T 2c5a_A          123 MISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---G  195 (379)
T ss_dssp             HHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---C
T ss_pred             HHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---C
Confidence            999999998853    3457899999976543                  22345689999999999999998774   8


Q ss_pred             cEEEEEeCCCCCCCCCc
Q psy3252         316 LTITLCLPPDTDTPGFE  332 (475)
Q Consensus       316 IrVn~V~PG~v~T~~~~  332 (475)
                      +++++|+||.|.+|...
T Consensus       196 i~~~ilrp~~v~G~~~~  212 (379)
T 2c5a_A          196 IECRIGRFHNIYGPFGT  212 (379)
T ss_dssp             CEEEEEEECCEECTTSC
T ss_pred             CCEEEEEeCceeCcCCC
Confidence            99999999999998643

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.79  E-value=2.9e-19  Score=177.65  Aligned_cols=172  Identities=16%  Similarity=0.163  Sum_probs=119.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ||+||||||+|+||.+++++|+++|++|+++.| +.+..+.. ..+... .                    ....++.++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~-~--------------------~~~~~~~~~   58 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNL-P--------------------GASEKLHFF   58 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTS-T--------------------THHHHEEEC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhh-h--------------------ccCCceEEE
Confidence            579999999999999999999999999999998 65321111 011110 0                    000357788


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHH-HHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQD-IKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      .+|++ |.+++.++++       .+|+|||||+..   .   ...++ .+.+                     +++|+.|
T Consensus        59 ~~Dl~-d~~~~~~~~~-------~~d~vih~A~~~---~---~~~~~~~~~~---------------------~~~nv~g  103 (322)
T 2p4h_X           59 NADLS-NPDSFAAAIE-------GCVGIFHTASPI---D---FAVSEPEEIV---------------------TKRTVDG  103 (322)
T ss_dssp             CCCTT-CGGGGHHHHT-------TCSEEEECCCCC--------------CHH---------------------HHHHHHH
T ss_pred             ecCCC-CHHHHHHHHc-------CCCEEEEcCCcc---c---CCCCChHHHH---------------------HHHHHHH
Confidence            99999 8888877765       589999999632   1   11111 1223                     8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCC----------------------ChhhHHHHHHHHHHHHHHHHHHcc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYG----------------------LAAYTSSKFALKGFAEALYMEVKQ  313 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~----------------------~~~Y~aSKaAl~~l~~sLa~El~~  313 (475)
                      ++++++++.+.   .+.++||++||.++..+.+.                      ...|+.||++.+.+++.++.+   
T Consensus       104 t~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---  177 (322)
T 2p4h_X          104 ALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---  177 (322)
T ss_dssp             HHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---
Confidence            99999988653   13579999999876543211                      116999999776665554432   


Q ss_pred             CCcEEEEEeCCCCCCCCCc
Q psy3252         314 SGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       314 ~gIrVn~V~PG~v~T~~~~  332 (475)
                      +||++++|+||.|.||+..
T Consensus       178 ~gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          178 NGIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             TTCCEEEEEECEEESCCCS
T ss_pred             cCCcEEEEcCCceECCCCC
Confidence            6899999999999999654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.79  E-value=1e-19  Score=184.15  Aligned_cols=169  Identities=16%  Similarity=0.125  Sum_probs=124.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++++||||||+|+||.+++++|+++| ++|++++|+.....     +...                         ..
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~~~-------------------------~~   91 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNL-------------------------VD   91 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----GGGT-------------------------TT
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----hhcc-------------------------cC
Confidence            34678899999999999999999999999 89999999764321     0000                         01


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +. +.+|++ +.+.++.+++.  ..++++|+||||||....      +.++++..                     +++|
T Consensus        92 ~~-~~~d~~-~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~------~~~~~~~~---------------------~~~n  140 (357)
T 2x6t_A           92 LN-IADYMD-KEDFLIQIMAG--EEFGDVEAIFHEGACSST------TEWDGKYM---------------------MDNN  140 (357)
T ss_dssp             SC-CSEEEE-HHHHHHHHHTT--CCCSSCCEEEECCSCCCT------TCCCHHHH---------------------HHHT
T ss_pred             ce-EeeecC-cHHHHHHHHhh--cccCCCCEEEECCcccCC------ccCCHHHH---------------------HHHH
Confidence            11 578999 88877777653  135689999999997543      11223334                     8999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC-----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      +.++.++++++.+.    +. +||++||...+...+           ....|+.||++.+.+++.++.+   .|+++++|
T Consensus       141 ~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~il  212 (357)
T 2x6t_A          141 YQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGF  212 (357)
T ss_dssp             HHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEE
T ss_pred             HHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEE
Confidence            99999999998763    34 899999987654332           2568999999999999988765   58999999


Q ss_pred             eCCCCCCCCC
Q psy3252         322 LPPDTDTPGF  331 (475)
Q Consensus       322 ~PG~v~T~~~  331 (475)
                      .||.|.+|..
T Consensus       213 Rp~~v~Gp~~  222 (357)
T 2x6t_A          213 RYFNVYGPRE  222 (357)
T ss_dssp             EECEEESSSC
T ss_pred             ecCeEECCCC
Confidence            9999999853

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.78  E-value=6.1e-19  Score=177.11  Aligned_cols=173  Identities=14%  Similarity=0.124  Sum_probs=129.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC-------CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRG-------AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPN  166 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~G-------a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  166 (475)
                      +.+++++||||||+|+||.+++++|+++|       ++|++++|+.+....       .                     
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~---------------------   61 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G---------------------   61 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T---------------------
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c---------------------
Confidence            45778899999999999999999999999       899999997542211       0                     


Q ss_pred             CCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccc
Q psy3252         167 PKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW  246 (475)
Q Consensus       167 ~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (475)
                        ...++.++.+|++ |.+++.++++      +++|+||||||....     .+.++++..                   
T Consensus        62 --~~~~~~~~~~Dl~-d~~~~~~~~~------~~~d~vih~A~~~~~-----~~~~~~~~~-------------------  108 (342)
T 2hrz_A           62 --FSGAVDARAADLS-APGEAEKLVE------ARPDVIFHLAAIVSG-----EAELDFDKG-------------------  108 (342)
T ss_dssp             --CCSEEEEEECCTT-STTHHHHHHH------TCCSEEEECCCCCHH-----HHHHCHHHH-------------------
T ss_pred             --cCCceeEEEcCCC-CHHHHHHHHh------cCCCEEEECCccCcc-----cccccHHHH-------------------
Confidence              0156888999999 8888887764      479999999997531     123344444                   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhC-CCCeEEEeccccccccC-C----------CChhhHHHHHHHHHHHHHHHHHH--c
Q psy3252         247 TVIDLNLYGTIHMTKALVEGMKQR-GRGCIVITASQAANLGI-Y----------GLAAYTSSKFALKGFAEALYMEV--K  312 (475)
Q Consensus       247 ~v~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~-~----------~~~~Y~aSKaAl~~l~~sLa~El--~  312 (475)
                        +++|+.|+.++++++.+...++ +.++||++||.+.+.+. +          +...|++||++++.+++.++.+.  .
T Consensus       109 --~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~  186 (342)
T 2hrz_A          109 --YRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFD  186 (342)
T ss_dssp             --HHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCE
T ss_pred             --HHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCC
Confidence              9999999999999987754332 14789999998765432 1          46789999999999998887652  2


Q ss_pred             cCCcEEEEEe--CCCCCCC
Q psy3252         313 QSGLTITLCL--PPDTDTP  329 (475)
Q Consensus       313 ~~gIrVn~V~--PG~v~T~  329 (475)
                      ...+|++.|.  ||.+.++
T Consensus       187 ~~~ir~~~v~g~pg~~~~~  205 (342)
T 2hrz_A          187 GIGIRLPTICIRPGKPNAA  205 (342)
T ss_dssp             EEEEEECEETTCCSSCCCS
T ss_pred             ceeEEeeeEEecCCCCcch
Confidence            2335666666  7665543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.78  E-value=3.1e-19  Score=177.10  Aligned_cols=164  Identities=21%  Similarity=0.279  Sum_probs=125.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+   .+    .                       ..+.++.+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~----~-----------------------~~~~~~~~D   51 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV----P-----------------------KGVPFFRVD   51 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS----C-----------------------TTCCEECCC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc----c-----------------------cCeEEEECC
Confidence            68999999999999999999999999999985321100   00    0                       234578899


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.+++++.     ++|++|||||....    ..+.++++..                     +++|+.|++++
T Consensus        52 l~-~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~---------------------~~~N~~g~~~l  100 (311)
T 2p5y_A           52 LR-DKEGVERAFREF-----RPTHVSHQAAQASV----KVSVEDPVLD---------------------FEVNLLGGLNL  100 (311)
T ss_dssp             TT-CHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHCHHHH---------------------HHHHTHHHHHH
T ss_pred             CC-CHHHHHHHHHhc-----CCCEEEECccccCc----hhhhhCHHHH---------------------HHHHHHHHHHH
Confidence            99 999888887642     79999999996431    1122333434                     99999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC-------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI-------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~-------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++++.    +.+.++||++||.++.++.             .....|++||++++.+++.++.++   |+++++|.||.|
T Consensus       101 ~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v  173 (311)
T 2p5y_A          101 LEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNV  173 (311)
T ss_dssp             HHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEE
T ss_pred             HHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccc
Confidence            99875    3345799999998332221             235689999999999999998874   899999999999


Q ss_pred             CCCCC
Q psy3252         327 DTPGF  331 (475)
Q Consensus       327 ~T~~~  331 (475)
                      .+|+.
T Consensus       174 ~Gp~~  178 (311)
T 2p5y_A          174 YGPRQ  178 (311)
T ss_dssp             ECTTC
T ss_pred             cCcCC
Confidence            99864

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.78  E-value=1.4e-18  Score=174.88  Aligned_cols=178  Identities=16%  Similarity=0.114  Sum_probs=127.2

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .++.+++++||||||+|+||.+++++|+++|  ++|++.+|......  ...+....                      .
T Consensus        18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~----------------------~   73 (346)
T 4egb_A           18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQ----------------------D   73 (346)
T ss_dssp             ------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTT----------------------T
T ss_pred             cccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhc----------------------c
Confidence            3566788999999999999999999999999  67888877542100  00111100                      0


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ..++.++.+|++ |.+++.++++..     ++|+||||||......    ..++.+..                     +
T Consensus        74 ~~~~~~~~~Dl~-d~~~~~~~~~~~-----~~d~Vih~A~~~~~~~----~~~~~~~~---------------------~  122 (346)
T 4egb_A           74 HPNYYFVKGEIQ-NGELLEHVIKER-----DVQVIVNFAAESHVDR----SIENPIPF---------------------Y  122 (346)
T ss_dssp             CTTEEEEECCTT-CHHHHHHHHHHH-----TCCEEEECCCCC-------------CHH---------------------H
T ss_pred             CCCeEEEEcCCC-CHHHHHHHHhhc-----CCCEEEECCcccchhh----hhhCHHHH---------------------H
Confidence            146889999999 999999888763     6999999999764321    22233333                     8


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCC------------CChhhHHHHHHHHHHHHHHHHHHccCCcE
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIY------------GLAAYTSSKFALKGFAEALYMEVKQSGLT  317 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIr  317 (475)
                      ++|+.|+.++++++..    .+.++||++||...+...+            ....|+.||.+.+.+++.++.+.   |++
T Consensus       123 ~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~  195 (346)
T 4egb_A          123 DTNVIGTVTLLELVKK----YPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLP  195 (346)
T ss_dssp             HHHTHHHHHHHHHHHH----STTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCC
T ss_pred             HHHHHHHHHHHHHHHh----cCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCC
Confidence            9999999999988754    3557899999976554321            24689999999999999998874   899


Q ss_pred             EEEEeCCCCCCCCC
Q psy3252         318 ITLCLPPDTDTPGF  331 (475)
Q Consensus       318 Vn~V~PG~v~T~~~  331 (475)
                      ++++.||.|.+|..
T Consensus       196 ~~ilRp~~v~G~~~  209 (346)
T 4egb_A          196 VIVTRCSNNYGPYQ  209 (346)
T ss_dssp             EEEEEECEEESTTC
T ss_pred             EEEEeecceeCcCC
Confidence            99999999999853

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.77  E-value=1.8e-18  Score=173.96  Aligned_cols=233  Identities=18%  Similarity=0.105  Sum_probs=156.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++||||||+|+||.+++++|+++  |++|++++|+......  +.+....                       ..++.++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~~~~~~-----------------------~~~~~~~   59 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK--ANLEAIL-----------------------GDRVELV   59 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG--GGTGGGC-----------------------SSSEEEE
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh--hHHhhhc-----------------------cCCeEEE
Confidence            68999999999999999999999  8999999996421000  0000000                       0457889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++       .+|+||||||....    +.+.++++..                     +++|+.|+
T Consensus        60 ~~Dl~-d~~~~~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~---------------------~~~Nv~g~  106 (348)
T 1oc2_A           60 VGDIA-DAELVDKLAA-------KADAIVHYAAESHN----DNSLNDPSPF---------------------IHTNFIGT  106 (348)
T ss_dssp             ECCTT-CHHHHHHHHT-------TCSEEEECCSCCCH----HHHHHCCHHH---------------------HHHHTHHH
T ss_pred             ECCCC-CHHHHHHHhh-------cCCEEEECCcccCc----cchhhCHHHH---------------------HHHHHHHH
Confidence            99999 9888877765       46999999997531    1112222333                     89999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccc-----------------------cCCCChhhHHHHHHHHHHHHHHHHHHcc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANL-----------------------GIYGLAAYTSSKFALKGFAEALYMEVKQ  313 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~  313 (475)
                      .++++++.+.    + ++||++||.+.+.                       +......|+.||++.+.+++.++.++  
T Consensus       107 ~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--  179 (348)
T 1oc2_A          107 YTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF--  179 (348)
T ss_dssp             HHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHh----C-CeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--
Confidence            9999998765    2 4899999976432                       22345789999999999999998875  


Q ss_pred             CCcEEEEEeCCCCCCCCCcccc--cC--------Cccc-cccccccCCCCChHHhhhccceeeecCCCCCCCCCcccccc
Q psy3252         314 SGLTITLCLPPDTDTPGFENEE--KS--------KPRE-TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEK  382 (475)
Q Consensus       314 ~gIrVn~V~PG~v~T~~~~~~~--~~--------~~~~-~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~  382 (475)
                       |+++++|+||.|.+|+.....  ..        .+.. ............++|++++.+.++...     .+|      
T Consensus       180 -gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-----~~g------  247 (348)
T 1oc2_A          180 -GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG-----RMG------  247 (348)
T ss_dssp             -CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC-----CTT------
T ss_pred             -CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC-----CCC------
Confidence             899999999999999753210  00        0000 000012234667899998876654321     011      


Q ss_pred             CCCcccccccCCCCCCChHHHHHHHHHHHhc
Q psy3252         383 SKPRETSLISQTGGLYRPEVVAKQLLEDALK  413 (475)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~  413 (475)
                          ....+. ....++..++++.+.+.+..
T Consensus       248 ----~~~~i~-~~~~~s~~e~~~~i~~~~g~  273 (348)
T 1oc2_A          248 ----ETYLIG-ADGEKNNKEVLELILEKMGQ  273 (348)
T ss_dssp             ----CEEEEC-CSCEEEHHHHHHHHHHHTTC
T ss_pred             ----CeEEeC-CCCCCCHHHHHHHHHHHhCC
Confidence                011121 12246788888888877654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.77  E-value=5.1e-19  Score=180.77  Aligned_cols=169  Identities=14%  Similarity=0.080  Sum_probs=127.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++++||||||+|+||.+++++|+++| ++|++++|+.....+   .+. .                        ...+
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~------------------------~~~v   80 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-D------------------------HPAV   80 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-C------------------------CTTE
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-C------------------------CCce
Confidence            4678899999999999999999999999 999999998643210   000 0                        0457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++       ++|+||||||.....    .+.++.+..                     +++|+
T Consensus        81 ~~~~~Dl~-d~~~l~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~---------------------~~~nv  127 (377)
T 2q1s_A           81 RFSETSIT-DDALLASLQD-------EYDYVFHLATYHGNQ----SSIHDPLAD---------------------HENNT  127 (377)
T ss_dssp             EEECSCTT-CHHHHHHCCS-------CCSEEEECCCCSCHH----HHHHCHHHH---------------------HHHHT
T ss_pred             EEEECCCC-CHHHHHHHhh-------CCCEEEECCCccCch----hhhhCHHHH---------------------HHHHH
Confidence            88999999 8887766543       799999999965321    112233333                     89999


Q ss_pred             HHHHHHHHHHHHHHHhC-CCCeEEEeccccccc----------------cC-CCChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         254 YGTIHMTKALVEGMKQR-GRGCIVITASQAANL----------------GI-YGLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~----------------~~-~~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                      .++.++++++.    +. +.++||++||...+-                +. .....|+.||++.+.+++.++.+.   |
T Consensus       128 ~~~~~ll~a~~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g  200 (377)
T 2q1s_A          128 LTTLKLYERLK----HFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---Q  200 (377)
T ss_dssp             HHHHHHHHHHT----TCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---C
T ss_pred             HHHHHHHHHHH----HhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---C
Confidence            99999998873    33 456899999976431                11 345689999999999999998874   8


Q ss_pred             cEEEEEeCCCCCCCCC
Q psy3252         316 LTITLCLPPDTDTPGF  331 (475)
Q Consensus       316 IrVn~V~PG~v~T~~~  331 (475)
                      +++++|.||.|.++..
T Consensus       201 i~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          201 LPTVRARFQNVYGPGE  216 (377)
T ss_dssp             CCEEEEEECCEECTTC
T ss_pred             CCEEEEeeccEECCCC
Confidence            9999999999999864

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.77  E-value=2e-18  Score=173.15  Aligned_cols=170  Identities=19%  Similarity=0.216  Sum_probs=124.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|+||.+++++|+++|++|++++|......+..+.+.....                       .++.++.+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~D   58 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-----------------------KHPTFVEGD   58 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT-----------------------SCCEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC-----------------------CcceEEEcc
Confidence            689999999999999999999999999998743211111222222110                       346778999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++..     ++|+||||||......    ..++....                     +++|+.|++++
T Consensus        59 l~-~~~~~~~~~~~~-----~~D~vih~A~~~~~~~----~~~~~~~~---------------------~~~n~~~~~~l  107 (338)
T 1udb_A           59 IR-NEALMTEILHDH-----AIDTVIHFAGLKAVGE----SVQKPLEY---------------------YDNNVNGTLRL  107 (338)
T ss_dssp             TT-CHHHHHHHHHHT-----TCSEEEECCSCCCHHH----HHHCHHHH---------------------HHHHHHHHHHH
T ss_pred             CC-CHHHHHHHhhcc-----CCCEEEECCccCcccc----chhcHHHH---------------------HHHHHHHHHHH
Confidence            99 988888877642     6999999999753211    11222333                     89999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEecccccccc-----------C-CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLG-----------I-YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~-~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      ++++.    +.+.++||++||.+.+..           . +....|++||++++.+++.++.+.  .|+++..+.|+.+.
T Consensus       108 ~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~  181 (338)
T 1udb_A          108 ISAMR----AANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPV  181 (338)
T ss_dssp             HHHHH----HHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEE
T ss_pred             HHHHH----hcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceec
Confidence            88653    335579999999765421           1 236789999999999999999873  37999999988776


Q ss_pred             CC
Q psy3252         328 TP  329 (475)
Q Consensus       328 T~  329 (475)
                      ++
T Consensus       182 G~  183 (338)
T 1udb_A          182 GA  183 (338)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.77  E-value=1.9e-18  Score=171.51  Aligned_cols=151  Identities=15%  Similarity=0.159  Sum_probs=94.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|+||||||+|+||.+++++|+++|++|++++|+.+.            +                       .   ++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~-----------------------~---~~~   43 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P-----------------------K---FEQ   43 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------------------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C-----------------------C---eEE
Confidence            6799999999999999999999999999999987532            0                       1   467


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++..     ++|+||||||.....    .+.++++..                     +++|+.++.
T Consensus        44 ~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~~~----~~~~~~~~~---------------------~~~n~~~~~   92 (315)
T 2ydy_A           44 VNLL-DSNAVHHIIHDF-----QPHVIVHCAAERRPD----VVENQPDAA---------------------SQLNVDASG   92 (315)
T ss_dssp             ---------CHHHHHHH-----CCSEEEECC--------------------------------------------CHHHH
T ss_pred             ecCC-CHHHHHHHHHhh-----CCCEEEECCcccChh----hhhcCHHHH---------------------HHHHHHHHH
Confidence            8999 888888887754     699999999975321    223444444                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEecccccccc----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLG----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      ++++++.+.    + ++||++||...+.+          ..+...|+.||++++.+++.++.       ++..|.|+.|.
T Consensus        93 ~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~-------~~~~lR~~~v~  160 (315)
T 2ydy_A           93 NLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNL-------GAAVLRIPILY  160 (315)
T ss_dssp             HHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCT-------TCEEEEECSEE
T ss_pred             HHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCC-------CeEEEeeeeee
Confidence            999998763    2 58999999887544          34467899999999999988743       33455565555


Q ss_pred             CC
Q psy3252         328 TP  329 (475)
Q Consensus       328 T~  329 (475)
                      ++
T Consensus       161 G~  162 (315)
T 2ydy_A          161 GE  162 (315)
T ss_dssp             CS
T ss_pred             CC
Confidence            44

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.77  E-value=1.5e-18  Score=180.22  Aligned_cols=178  Identities=12%  Similarity=0.107  Sum_probs=129.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh---HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK---KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ....+++||||||+|+||.+++++|++.|++|++++|+.+   .++.+.+.+....+..    ...           ...
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~----~~~-----------~~~  129 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEE----TVE-----------MML  129 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHH----HHH-----------HHH
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhcccc----ccc-----------ccc
Confidence            3456789999999999999999999999999999999977   4444444444321100    000           001


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |.+++.        .++++|+||||||....       .++++..                     ++
T Consensus       130 ~~v~~v~~Dl~-d~~~l~--------~~~~~d~Vih~A~~~~~-------~~~~~~~---------------------~~  172 (427)
T 4f6c_A          130 SNIEVIVGDFE-CMDDVV--------LPENMDTIIHAGARTDH-------FGDDDEF---------------------EK  172 (427)
T ss_dssp             TTEEEEEECC----CCCC--------CSSCCSEEEECCCCC--------------CH---------------------HH
T ss_pred             CceEEEeCCCC-CcccCC--------CcCCCCEEEECCcccCC-------CCCHHHH---------------------HH
Confidence            46889999999 877666        46799999999997531       1234444                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccc--c----------------ccCCCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAA--N----------------LGIYGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~--~----------------~~~~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                      +|+.|+.++++++.+     +.++||++||..+  .                .+......|+.||++.+.+++.++.   
T Consensus       173 ~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---  244 (427)
T 4f6c_A          173 VNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN---  244 (427)
T ss_dssp             HHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH---
Confidence            999999999999876     3478999999876  0                0122567999999999999988653   


Q ss_pred             cCCcEEEEEeCCCCCCCCCc
Q psy3252         313 QSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       313 ~~gIrVn~V~PG~v~T~~~~  332 (475)
                       .|+++++|.||.|.++...
T Consensus       245 -~g~~~~ivRpg~v~G~~~~  263 (427)
T 4f6c_A          245 -NGLDGRIVRVGNLTSPYNG  263 (427)
T ss_dssp             -TTCCEEEEEECCEESCSSS
T ss_pred             -cCCCEEEEeCCeeecCCCC
Confidence             6899999999999998543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.77  E-value=2e-19  Score=168.35  Aligned_cols=151  Identities=13%  Similarity=0.117  Sum_probs=119.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+++++||||+|+||.+++++|+++|+  +|++++|+.++          ..                        .++.
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~------------------------~~~~   49 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EH------------------------PRLD   49 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CC------------------------TTEE
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cC------------------------CCce
Confidence            467999999999999999999999998  99999998653          01                        3467


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+++.+++         +|+||||||....      +.++++..                     +++|+.
T Consensus        50 ~~~~D~~-~~~~~~~~~---------~d~vi~~a~~~~~------~~~~~~~~---------------------~~~n~~   92 (215)
T 2a35_A           50 NPVGPLA-ELLPQLDGS---------IDTAFCCLGTTIK------EAGSEEAF---------------------RAVDFD   92 (215)
T ss_dssp             CCBSCHH-HHGGGCCSC---------CSEEEECCCCCHH------HHSSHHHH---------------------HHHHTH
T ss_pred             EEecccc-CHHHHHHhh---------hcEEEECeeeccc------cCCCHHHH---------------------HHhhHH
Confidence            7889998 776655443         8999999996532      12233334                     899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcE-EEEEeCCCCCCCCC
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLT-ITLCLPPDTDTPGF  331 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIr-Vn~V~PG~v~T~~~  331 (475)
                      ++.++++++.+    .+.++||++||..+...  ....|+.+|++++.+++.       .|++ ++.|+||.+.++..
T Consensus        93 ~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~  157 (215)
T 2a35_A           93 LPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPRE  157 (215)
T ss_dssp             HHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTS
T ss_pred             HHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCC
Confidence            99999988754    35578999999877532  356899999999988764       4898 99999999999843

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.77  E-value=4e-19  Score=175.86  Aligned_cols=162  Identities=14%  Similarity=0.068  Sum_probs=126.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc--CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++++|||||+|+||.+++++|+++  |++|++++|+....+     +.                           ..+.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~---------------------------~~~~~   49 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV---------------------------NSGPF   49 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH---------------------------HSSCE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc---------------------------CCCce
Confidence            468999999999999999999999  899999999865421     11                           12457


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++.+++++.     ++|+||||||.....     ..++.+..                     +++|+.+
T Consensus        50 ~~~D~~-d~~~~~~~~~~~-----~~d~vih~a~~~~~~-----~~~~~~~~---------------------~~~n~~~   97 (312)
T 2yy7_A           50 EVVNAL-DFNQIEHLVEVH-----KITDIYLMAALLSAT-----AEKNPAFA---------------------WDLNMNS   97 (312)
T ss_dssp             EECCTT-CHHHHHHHHHHT-----TCCEEEECCCCCHHH-----HHHCHHHH---------------------HHHHHHH
T ss_pred             EEecCC-CHHHHHHHHhhc-----CCCEEEECCccCCCc-----hhhChHHH---------------------HHHHHHH
Confidence            899999 988888887653     699999999965321     11233333                     8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccC------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGI------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                      +.++++++.+    .+.++||++||...+.+.            .....|+.||++.+.+++.++.+.   |++++++.|
T Consensus        98 ~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp  170 (312)
T 2yy7_A           98 LFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRY  170 (312)
T ss_dssp             HHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEE
T ss_pred             HHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeC
Confidence            9999988753    345799999998765331            225689999999999999988774   899999999


Q ss_pred             CCCCCCC
Q psy3252         324 PDTDTPG  330 (475)
Q Consensus       324 G~v~T~~  330 (475)
                      |.+.++.
T Consensus       171 ~~v~g~~  177 (312)
T 2yy7_A          171 PGLISWS  177 (312)
T ss_dssp             CEEECSS
T ss_pred             CeEecCC
Confidence            9999874

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.76  E-value=1.2e-18  Score=177.13  Aligned_cols=170  Identities=16%  Similarity=0.144  Sum_probs=127.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +..+++++||||||+|+||.+++++|+++ |++|++++|+.+++..+..                             ..
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----------------------------~~   69 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----------------------------HE   69 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----------------------------ST
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----------------------------CC
Confidence            44567889999999999999999999999 9999999998754432211                             04


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|+++|.+++.++++       ++|+|||+||......    ..++....                     +++
T Consensus        70 ~v~~~~~Dl~~d~~~~~~~~~-------~~d~Vih~A~~~~~~~----~~~~~~~~---------------------~~~  117 (372)
T 3slg_A           70 RMHFFEGDITINKEWVEYHVK-------KCDVILPLVAIATPAT----YVKQPLRV---------------------FEL  117 (372)
T ss_dssp             TEEEEECCTTTCHHHHHHHHH-------HCSEEEECBCCCCHHH----HHHCHHHH---------------------HHH
T ss_pred             CeEEEeCccCCCHHHHHHHhc-------cCCEEEEcCccccHHH----HhhCHHHH---------------------HHH
Confidence            588999999856677777665       5899999999754221    11222223                     899


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC------------------CCChhhHHHHHHHHHHHHHHHHHHcc
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI------------------YGLAAYTSSKFALKGFAEALYMEVKQ  313 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------------~~~~~Y~aSKaAl~~l~~sLa~El~~  313 (475)
                      |+.++.++++++...    + .+||++||...+-..                  .....|+.||.+.+.+++.++.+   
T Consensus       118 nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~---  189 (372)
T 3slg_A          118 DFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME---  189 (372)
T ss_dssp             HTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC---
Confidence            999999998887543    4 689999996544221                  22347999999999999888765   


Q ss_pred             CCcEEEEEeCCCCCCCCCc
Q psy3252         314 SGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       314 ~gIrVn~V~PG~v~T~~~~  332 (475)
                       |++++++.|+.|.+|...
T Consensus       190 -g~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          190 -GLNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             -TCEEEEEEECSEECSSCC
T ss_pred             -CCCEEEEccccccCCCcc
Confidence             899999999999998543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.76  E-value=3.1e-18  Score=170.97  Aligned_cols=164  Identities=15%  Similarity=0.220  Sum_probs=127.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +++|||||+|+||.+++++|+++|++|++++|+.....   +.+    .                       .++.++.+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~----~-----------------------~~~~~~~~   51 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI----T-----------------------EGAKFYNG   51 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS----C-----------------------TTSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc----C-----------------------CCcEEEEC
Confidence            58999999999999999999999999999998754221   000    0                       24678899


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+++.+++++     +++|+||||||.....    .+.++.+..                     +++|+.++.+
T Consensus        52 D~~-~~~~~~~~~~~-----~~~d~vih~a~~~~~~----~~~~~~~~~---------------------~~~n~~~~~~  100 (330)
T 2c20_A           52 DLR-DKAFLRDVFTQ-----ENIEAVMHFAADSLVG----VSMEKPLQY---------------------YNNNVYGALC  100 (330)
T ss_dssp             CTT-CHHHHHHHHHH-----SCEEEEEECCCCCCHH----HHHHSHHHH---------------------HHHHHHHHHH
T ss_pred             CCC-CHHHHHHHHhh-----cCCCEEEECCcccCcc----ccccCHHHH---------------------HHHHhHHHHH
Confidence            999 98888887764     3799999999975321    122334444                     8999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++++.    +.+.++||++||...+...           .....|+.||++.+.+++.++.+   .|++++++.||.|.
T Consensus       101 l~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~  173 (330)
T 2c20_A          101 LLEVMD----EFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQA---SNLRYKIFRYFNVA  173 (330)
T ss_dssp             HHHHHH----HTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHT---SSCEEEEEECSEEE
T ss_pred             HHHHHH----HcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEecCccc
Confidence            998864    3455799999997664321           23578999999999999998876   48999999999999


Q ss_pred             CCC
Q psy3252         328 TPG  330 (475)
Q Consensus       328 T~~  330 (475)
                      ++.
T Consensus       174 G~~  176 (330)
T 2c20_A          174 GAT  176 (330)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            884

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.76  E-value=6.2e-18  Score=169.14  Aligned_cols=173  Identities=14%  Similarity=0.059  Sum_probs=129.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+++||||||+|+||.+++++|+++|++|++++|+.+....  ..+.....                      ...+.++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~----------------------~~~~~~~   68 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGI----------------------EGDIQYE   68 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTTC----------------------GGGEEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhccc----------------------cCceEEE
Confidence            36799999999999999999999999999999998653210  01111100                      0457889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++.+     ++|+||||||......    +.++.+..                     +++|+.++
T Consensus        69 ~~Dl~-d~~~~~~~~~~~-----~~d~Vih~A~~~~~~~----~~~~~~~~---------------------~~~n~~~~  117 (335)
T 1rpn_A           69 DGDMA-DACSVQRAVIKA-----QPQEVYNLAAQSFVGA----SWNQPVTT---------------------GVVDGLGV  117 (335)
T ss_dssp             ECCTT-CHHHHHHHHHHH-----CCSEEEECCSCCCHHH----HTTSHHHH---------------------HHHHTHHH
T ss_pred             ECCCC-CHHHHHHHHHHc-----CCCEEEECccccchhh----hhhChHHH---------------------HHHHHHHH
Confidence            99999 999998888765     7999999999643210    11123333                     89999999


Q ss_pred             HHHHHHHHHHHHhCC-CCeEEEeccccccccCC-----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         257 IHMTKALVEGMKQRG-RGCIVITASQAANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~-----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                      .++++++.+.    + .++||++||...+.+..           ....|+.||++.+.+++.++.++   |+++..+.|+
T Consensus       118 ~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~  190 (335)
T 1rpn_A          118 THLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILF  190 (335)
T ss_dssp             HHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEEC
T ss_pred             HHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeC
Confidence            9999988653    3 37899999976653322           24589999999999999998774   7888999999


Q ss_pred             CCCCCCC
Q psy3252         325 DTDTPGF  331 (475)
Q Consensus       325 ~v~T~~~  331 (475)
                      .+.+|..
T Consensus       191 ~v~Gp~~  197 (335)
T 1rpn_A          191 NHESPLR  197 (335)
T ss_dssp             CEECTTS
T ss_pred             cccCCCC
Confidence            9988753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.76  E-value=2.9e-18  Score=172.11  Aligned_cols=229  Identities=13%  Similarity=0.008  Sum_probs=150.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ...+++++||||||+|+||.+++++|+++|++|++++|+.....+.   +..                        . .+
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~------------------------~-~~   67 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD------------------------H-PN   67 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC------------------------C-TT
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh------------------------c-CC
Confidence            3456788999999999999999999999999999999975321100   000                        0 24


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.+++.++++.     +++|+||||||.....     +.++.+                       +++|
T Consensus        68 ~~~~~~Dl~-d~~~~~~~~~~-----~~~D~vih~A~~~~~~-----~~~~~~-----------------------~~~N  113 (333)
T 2q1w_A           68 LTFVEGSIA-DHALVNQLIGD-----LQPDAVVHTAASYKDP-----DDWYND-----------------------TLTN  113 (333)
T ss_dssp             EEEEECCTT-CHHHHHHHHHH-----HCCSEEEECCCCCSCT-----TCHHHH-----------------------HHHH
T ss_pred             ceEEEEeCC-CHHHHHHHHhc-----cCCcEEEECceecCCC-----ccCChH-----------------------HHHH
Confidence            778999999 99988888765     2799999999976432     222222                       6799


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccc----c---------CCCChhhHHHHHHHHHHHHH-HHHHHccCCcEE
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANL----G---------IYGLAAYTSSKFALKGFAEA-LYMEVKQSGLTI  318 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~----~---------~~~~~~Y~aSKaAl~~l~~s-La~El~~~gIrV  318 (475)
                      +.++.++++++.+    .+.++||++||.+.+.    .         .|....|+.||++++.+++. ++        ++
T Consensus       114 ~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~  181 (333)
T 2q1w_A          114 CVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL--------DF  181 (333)
T ss_dssp             THHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CE
T ss_pred             HHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------Ce
Confidence            9999999999865    3457999999977653    2         22227899999999999887 64        56


Q ss_pred             EEEeCCCCCCCCCcc-ccc-------CCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCccccc
Q psy3252         319 TLCLPPDTDTPGFEN-EEK-------SKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSL  390 (475)
Q Consensus       319 n~V~PG~v~T~~~~~-~~~-------~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  390 (475)
                      +.|.|+.+.+|.... ...       ....... ..+......++|++++.+.++....     .+           ...
T Consensus       182 ~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-----g~-----------~~~  244 (333)
T 2q1w_A          182 VTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAVDGVG-----HG-----------AYH  244 (333)
T ss_dssp             EEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHHTTCC-----CE-----------EEE
T ss_pred             EEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHHhcCC-----CC-----------EEE
Confidence            778888887775110 000       0000000 1233456778888888665443211     11           111


Q ss_pred             ccCCCCCCChHHHHHHHHHHHhc
Q psy3252         391 ISQTGGLYRPEVVAKQLLEDALK  413 (475)
Q Consensus       391 ~~~~~~~~~~e~vA~~i~~ai~~  413 (475)
                      +. ....++..++++.+.+.+..
T Consensus       245 v~-~~~~~s~~e~~~~i~~~~g~  266 (333)
T 2q1w_A          245 FS-SGTDVAIKELYDAVVEAMAL  266 (333)
T ss_dssp             CS-CSCCEEHHHHHHHHHHHTTC
T ss_pred             eC-CCCCccHHHHHHHHHHHhCC
Confidence            11 12246788888888776644

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.75  E-value=8.5e-18  Score=168.43  Aligned_cols=166  Identities=20%  Similarity=0.194  Sum_probs=125.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---C---CEEEEEecChhH--HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR---G---AHVTIVARDEKK--LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~---G---a~Vvl~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ++|||||+|+||.+++++|+++   |   ++|++++|+...  .+.+ ..+..                         ..
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~-------------------------~~   55 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDA-------------------------DP   55 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTT-------------------------CT
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhccc-------------------------CC
Confidence            6899999999999999999997   8   999999986421  1100 00000                         04


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.+++.+++       +++|+||||||....    +.+.++++..                     +++
T Consensus        56 ~~~~~~~Dl~-d~~~~~~~~-------~~~d~Vih~A~~~~~----~~~~~~~~~~---------------------~~~  102 (337)
T 1r6d_A           56 RLRFVHGDIR-DAGLLAREL-------RGVDAIVHFAAESHV----DRSIAGASVF---------------------TET  102 (337)
T ss_dssp             TEEEEECCTT-CHHHHHHHT-------TTCCEEEECCSCCCH----HHHHHCCHHH---------------------HHH
T ss_pred             CeEEEEcCCC-CHHHHHHHh-------cCCCEEEECCCccCc----hhhhhCHHHH---------------------HHH
Confidence            5788999999 988777765       489999999996531    1111222333                     899


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-----------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANL-----------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                      |+.++.++++++.+.    +.++||++||.+.+.           +......|+.||++.+.+++.++.++   |+++++
T Consensus       103 Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~i  175 (337)
T 1r6d_A          103 NVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRI  175 (337)
T ss_dssp             HTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEE
T ss_pred             HHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEE
Confidence            999999999998764    346899999976542           22346789999999999999998874   799999


Q ss_pred             EeCCCCCCCCC
Q psy3252         321 CLPPDTDTPGF  331 (475)
Q Consensus       321 V~PG~v~T~~~  331 (475)
                      ++||.|.+|..
T Consensus       176 lrp~~v~G~~~  186 (337)
T 1r6d_A          176 TRCCNNYGPYQ  186 (337)
T ss_dssp             EEECEEECTTC
T ss_pred             EEeeeeECCCC
Confidence            99999999853

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.75  E-value=5.8e-19  Score=177.01  Aligned_cols=170  Identities=16%  Similarity=0.152  Sum_probs=122.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH--HHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ--EEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +|+||||||+|+||.+++++|+++|++|+++.|+.+..++..  ..+. ..                        .++.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~------------------------~~~~~   63 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-EL------------------------GDLKI   63 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GG------------------------SCEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CC------------------------CcEEE
Confidence            689999999999999999999999999999999865332111  1121 00                        35778


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++.++++       .+|+|||+||...   ..  ..+..+..                     +++|+.|
T Consensus        64 ~~~Dl~-d~~~~~~~~~-------~~D~Vih~A~~~~---~~--~~~~~~~~---------------------~~~nv~g  109 (338)
T 2rh8_A           64 FRADLT-DELSFEAPIA-------GCDFVFHVATPVH---FA--SEDPENDM---------------------IKPAIQG  109 (338)
T ss_dssp             EECCTT-TSSSSHHHHT-------TCSEEEEESSCCC---C--------------------------------CHHHHHH
T ss_pred             EecCCC-ChHHHHHHHc-------CCCEEEEeCCccC---CC--CCCcHHHH---------------------HHHHHHH
Confidence            999999 8777776654       5899999998541   11  11111223                     8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccC---------------------C---CChhhHHHHHHHHHHHHHHHHHH
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGI---------------------Y---GLAAYTSSKFALKGFAEALYMEV  311 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------------------~---~~~~Y~aSKaAl~~l~~sLa~El  311 (475)
                      ++++++++.+..   +.++||++||.++..+.                     +   ....|++||++.+.+++.++.+ 
T Consensus       110 t~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-  185 (338)
T 2rh8_A          110 VVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE-  185 (338)
T ss_dssp             HHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH-
Confidence            999999986542   24789999998743210                     0   0115999999988887776654 


Q ss_pred             ccCCcEEEEEeCCCCCCCCCc
Q psy3252         312 KQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       312 ~~~gIrVn~V~PG~v~T~~~~  332 (475)
                        +|+++++|.||.|.+|+..
T Consensus       186 --~gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          186 --NNIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             --HTCCEEEEEECEEESCCSS
T ss_pred             --cCCcEEEEeCCceECCCCC
Confidence              5899999999999999654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.73  E-value=1.9e-17  Score=165.95  Aligned_cols=164  Identities=16%  Similarity=0.097  Sum_probs=123.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ++||||||+|+||.+++++|+++ |++|++++|+.++.+.+.    . .                        .++.++.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~-~------------------------~~~~~~~   51 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N-H------------------------PHFHFVE   51 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----T-C------------------------TTEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----c-C------------------------CCeEEEe
Confidence            37999999999999999999998 899999999876543211    0 0                        3578899


Q ss_pred             eecCCC-HHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         178 LDISKD-YENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       178 ~Dvt~d-~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      +|++ | .+.+.++++       .+|+||||||.......    .++.+..                     +++|+.++
T Consensus        52 ~D~~-~~~~~~~~~~~-------~~d~vih~A~~~~~~~~----~~~~~~~---------------------~~~n~~~~   98 (345)
T 2bll_A           52 GDIS-IHSEWIEYHVK-------KCDVVLPLVAIATPIEY----TRNPLRV---------------------FELDFEEN   98 (345)
T ss_dssp             CCTT-TCSHHHHHHHH-------HCSEEEECBCCCCHHHH----HHSHHHH---------------------HHHHTHHH
T ss_pred             cccc-CcHHHHHhhcc-------CCCEEEEcccccCccch----hcCHHHH---------------------HHHHHHHH
Confidence            9999 6 455666554       58999999997532111    1223333                     89999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCC------------------CChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIY------------------GLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~------------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                      .++++++..    .+ ++||++||...+...+                  ....|+.||++.+.+++.++.+.   |+++
T Consensus        99 ~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~  170 (345)
T 2bll_A           99 LRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQF  170 (345)
T ss_dssp             HHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCE
T ss_pred             HHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCE
Confidence            999888754    34 7899999976543211                  12279999999999999998774   8999


Q ss_pred             EEEeCCCCCCCCCc
Q psy3252         319 TLCLPPDTDTPGFE  332 (475)
Q Consensus       319 n~V~PG~v~T~~~~  332 (475)
                      ++|.||.|.+|...
T Consensus       171 ~ilrp~~v~G~~~~  184 (345)
T 2bll_A          171 TLFRPFNWMGPRLD  184 (345)
T ss_dssp             EEEEECSEECSSCC
T ss_pred             EEEcCCcccCCCcc
Confidence            99999999998643

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.73  E-value=1.9e-17  Score=182.71  Aligned_cols=178  Identities=16%  Similarity=0.220  Sum_probs=130.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ..+++|+||||||+|+||.+++++|+++|++|++++|+.....+..+++.....                       ..+
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------------------~~v   63 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-----------------------HHI   63 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT-----------------------SCC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccC-----------------------Cce
Confidence            446789999999999999999999999999999999875432222222222110                       346


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++.++++..     ++|+||||||........    +.....                     +++|+
T Consensus        64 ~~v~~Dl~-d~~~l~~~~~~~-----~~D~Vih~A~~~~~~~~~----~~~~~~---------------------~~~Nv  112 (699)
T 1z45_A           64 PFYEVDLC-DRKGLEKVFKEY-----KIDSVIHFAGLKAVGEST----QIPLRY---------------------YHNNI  112 (699)
T ss_dssp             CEEECCTT-CHHHHHHHHHHS-----CCCEEEECCSCCCHHHHH----HSHHHH---------------------HHHHH
T ss_pred             EEEEcCCC-CHHHHHHHHHhC-----CCCEEEECCcccCcCccc----cCHHHH---------------------HHHHH
Confidence            68899999 988888877643     799999999975322111    111223                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccccc---------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLG---------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~---------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                      .++.++++++.    +.+.++||++||.+.+-.               ......|+.||++++.+++.++.+. ..|+++
T Consensus       113 ~gt~~ll~a~~----~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~  187 (699)
T 1z45_A          113 LGTVVLLELMQ----QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKF  187 (699)
T ss_dssp             HHHHHHHHHHH----HHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEE
T ss_pred             HHHHHHHHHHH----HcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcE
Confidence            99999987654    335579999999765421               1134689999999999999998875 468999


Q ss_pred             EEEeCCCCCCCC
Q psy3252         319 TLCLPPDTDTPG  330 (475)
Q Consensus       319 n~V~PG~v~T~~  330 (475)
                      +++.|+.|.++.
T Consensus       188 ~ilR~~~vyG~~  199 (699)
T 1z45_A          188 AILRYFNPIGAH  199 (699)
T ss_dssp             EEEEECEEECCC
T ss_pred             EEEEeccccCCC
Confidence            999999988763

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.72  E-value=2.9e-17  Score=162.91  Aligned_cols=157  Identities=19%  Similarity=0.096  Sum_probs=121.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++||||||+|+||.+++++|+++|++|++++|+....+ +                                ..+.++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~--------------------------------~~~~~~~   48 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I--------------------------------NDYEYRV   48 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------------------------------CCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C--------------------------------CceEEEE
Confidence            468999999999999999999999999999999843221 1                                1356789


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++  .+++.++++       ++|+|||+||.....        +.+..                     +++|+.++.
T Consensus        49 ~Dl~--~~~~~~~~~-------~~d~Vih~a~~~~~~--------~~~~~---------------------~~~n~~~~~   90 (311)
T 3m2p_A           49 SDYT--LEDLINQLN-------DVDAVVHLAATRGSQ--------GKISE---------------------FHDNEILTQ   90 (311)
T ss_dssp             CCCC--HHHHHHHTT-------TCSEEEECCCCCCSS--------SCGGG---------------------THHHHHHHH
T ss_pred             cccc--HHHHHHhhc-------CCCEEEEccccCCCC--------ChHHH---------------------HHHHHHHHH
Confidence            9997  566666554       799999999976433        11222                     899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++++++.    +.+.++||++||...+..           ......|+.||.+.+.+++.++.+   .|++++.+.||.|
T Consensus        91 ~ll~a~~----~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v  163 (311)
T 3m2p_A           91 NLYDACY----ENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHL  163 (311)
T ss_dssp             HHHHHHH----HTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEE
T ss_pred             HHHHHHH----HcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCce
Confidence            9988874    345568999999665422           113468999999999999988875   6899999999999


Q ss_pred             CCCCCc
Q psy3252         327 DTPGFE  332 (475)
Q Consensus       327 ~T~~~~  332 (475)
                      .+|...
T Consensus       164 ~G~~~~  169 (311)
T 3m2p_A          164 YGFNEK  169 (311)
T ss_dssp             ECSCC-
T ss_pred             eCcCCC
Confidence            998544

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.72  E-value=7.7e-18  Score=166.24  Aligned_cols=163  Identities=17%  Similarity=0.136  Sum_probs=120.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++|||||+|+||.+++++|+++| ++|++++|+.....  ...+..                          .  . +.+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~--------------------------~--~-~~~   49 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD--------------------------L--N-IAD   49 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT--------------------------S--C-CSE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc--------------------------c--e-ecc
Confidence            37999999999999999999999 89999999764321  011110                          1  1 568


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ +.+.++.+++...  ++++|+||||||....      +.++.+..                     +++|+.++.+
T Consensus        50 d~~-~~~~~~~~~~~~~--~~~~d~vi~~a~~~~~------~~~~~~~~---------------------~~~n~~~~~~   99 (310)
T 1eq2_A           50 YMD-KEDFLIQIMAGEE--FGDVEAIFHEGACSST------TEWDGKYM---------------------MDNNYQYSKE   99 (310)
T ss_dssp             EEE-HHHHHHHHHTTCC--CSSCCEEEECCSCCCT------TCCCHHHH---------------------HHHTHHHHHH
T ss_pred             ccc-cHHHHHHHHhccc--cCCCcEEEECcccccC------cccCHHHH---------------------HHHHHHHHHH
Confidence            998 8777776654110  2369999999997543      11223333                     8999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCC-----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +++++.+.    +. +||++||...+....           ....|+.||.+.+.+++.++.+   .|+++++|.||.|.
T Consensus       100 l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~  171 (310)
T 1eq2_A          100 LLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVY  171 (310)
T ss_dssp             HHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEE
T ss_pred             HHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEE
Confidence            99988653    34 899999986543222           2568999999999999988765   58999999999999


Q ss_pred             CCCC
Q psy3252         328 TPGF  331 (475)
Q Consensus       328 T~~~  331 (475)
                      +|..
T Consensus       172 G~~~  175 (310)
T 1eq2_A          172 GPRE  175 (310)
T ss_dssp             SSSC
T ss_pred             CcCC
Confidence            9853

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.71  E-value=2.2e-17  Score=166.08  Aligned_cols=234  Identities=15%  Similarity=0.054  Sum_probs=149.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ...+++++||||||+|+||.+++++|+++|++|++++|+.....+....+.   .                      ..+
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~----------------------~~~   76 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI---G----------------------HEN   76 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT---T----------------------CTT
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc---c----------------------CCc
Confidence            344678899999999999999999999999999999986432111000000   0                      035


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ +..            +..+|+||||||........    ++.+..                     +++|
T Consensus        77 ~~~~~~D~~-~~~------------~~~~d~vih~A~~~~~~~~~----~~~~~~---------------------~~~n  118 (343)
T 2b69_A           77 FELINHDVV-EPL------------YIEVDQIYHLASPASPPNYM----YNPIKT---------------------LKTN  118 (343)
T ss_dssp             EEEEECCTT-SCC------------CCCCSEEEECCSCCSHHHHT----TCHHHH---------------------HHHH
T ss_pred             eEEEeCccC-Chh------------hcCCCEEEECccccCchhhh----hCHHHH---------------------HHHH
Confidence            788999998 631            45799999999975321111    112233                     8999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccc----------------cCCCChhhHHHHHHHHHHHHHHHHHHccCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANL----------------GIYGLAAYTSSKFALKGFAEALYMEVKQSGL  316 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~----------------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gI  316 (475)
                      +.++.++++++...    + .+||++||...+-                +......|+.||++.+.+++.++.+.   |+
T Consensus       119 ~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~  190 (343)
T 2b69_A          119 TIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GV  190 (343)
T ss_dssp             HHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CC
T ss_pred             HHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CC
Confidence            99999999988643    3 4899999976542                22235679999999999999988764   89


Q ss_pred             EEEEEeCCCCCCCCCcccccCC--cc------cccc--c---cccCCCCChHHhhhccceeeecCCCCCCCCCccccccC
Q psy3252         317 TITLCLPPDTDTPGFENEEKSK--PR------ETSL--I---SQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKS  383 (475)
Q Consensus       317 rVn~V~PG~v~T~~~~~~~~~~--~~------~~~~--~---~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~  383 (475)
                      +++++.||.|.+|.........  ..      ....  .   .........+|++++.+.++.. +.    .+.      
T Consensus       191 ~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~-~~----~~~------  259 (343)
T 2b69_A          191 EVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS-NV----SSP------  259 (343)
T ss_dssp             CEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS-SC----CSC------
T ss_pred             cEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhc-CC----CCe------
Confidence            9999999999998643210000  00      0000  0   0112245778888876654321 11    111      


Q ss_pred             CCcccccccCCCCCCChHHHHHHHHHHHhcC
Q psy3252         384 KPRETSLISQTGGLYRPEVVAKQLLEDALKG  414 (475)
Q Consensus       384 ~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g  414 (475)
                           ..+. ....++..++++.+.+.+...
T Consensus       260 -----~~i~-~~~~~s~~e~~~~i~~~~g~~  284 (343)
T 2b69_A          260 -----VNLG-NPEEHTILEFAQLIKNLVGSG  284 (343)
T ss_dssp             -----EEES-CCCEEEHHHHHHHHHHHHTCC
T ss_pred             -----EEec-CCCCCcHHHHHHHHHHHhCCC
Confidence                 1111 122467888988888877644

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.71  E-value=2e-17  Score=160.42  Aligned_cols=144  Identities=16%  Similarity=0.105  Sum_probs=110.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++||||+|+||.+++++|+ +|++|++++|+.+. +          .                       .    +.+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~-----------------------~----~~~D   42 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------G-----------------------G----YKLD   42 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------T-----------------------C----EECC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------C-----------------------C----ceec
Confidence            58999999999999999999 58999999998531 0          0                       2    6899


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++.+     ++|+||||||.....    .+.++++..                     +++|+.++.++
T Consensus        43 l~-~~~~~~~~~~~~-----~~d~vi~~a~~~~~~----~~~~~~~~~---------------------~~~n~~~~~~l   91 (273)
T 2ggs_A           43 LT-DFPRLEDFIIKK-----RPDVIINAAAMTDVD----KCEIEKEKA---------------------YKINAEAVRHI   91 (273)
T ss_dssp             TT-SHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHHHCHHHH---------------------HHHHTHHHHHH
T ss_pred             cC-CHHHHHHHHHhc-----CCCEEEECCcccChh----hhhhCHHHH---------------------HHHhHHHHHHH
Confidence            99 999999888765     799999999975321    122344444                     99999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCC----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIY----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      ++++.+    .+ ++||++||..++.+.+          ....|+.||++++.+++.    +     .+..|.|+.|.
T Consensus        92 ~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~----~-----~~~~iR~~~v~  155 (273)
T 2ggs_A           92 VRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ----D-----DSLIIRTSGIF  155 (273)
T ss_dssp             HHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC----T-----TCEEEEECCCB
T ss_pred             HHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC----C-----CeEEEeccccc
Confidence            999854    23 5999999988765433          257899999999999877    2     23455555555

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.70  E-value=3.4e-17  Score=160.67  Aligned_cols=144  Identities=16%  Similarity=0.210  Sum_probs=114.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .++||||||+|+||.+++++|+++|++|++++|+.                                             
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------------------------------------   46 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------------------------------   46 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------------------------------
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------------------------------------
Confidence            45899999999999999999999999999999851                                             


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++..     ++|+||||||....    +.+.++++..                     +++|+.++.
T Consensus        47 ~Dl~-d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~---------------------~~~nv~~~~   95 (292)
T 1vl0_A           47 LDIT-NVLAVNKFFNEK-----KPNVVINCAAHTAV----DKCEEQYDLA---------------------YKINAIGPK   95 (292)
T ss_dssp             CCTT-CHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHHHCHHHH---------------------HHHHTHHHH
T ss_pred             CCCC-CHHHHHHHHHhc-----CCCEEEECCccCCH----HHHhcCHHHH---------------------HHHHHHHHH
Confidence            5888 988888887754     79999999996432    1122334444                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCC-----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++++++.+.    + .+||++||.+.+.+..           ....|+.||++++.+++.++.       +++.|.|+.|
T Consensus        96 ~l~~a~~~~----~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v  163 (292)
T 1vl0_A           96 NLAAAAYSV----G-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWL  163 (292)
T ss_dssp             HHHHHHHHH----T-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSE
T ss_pred             HHHHHHHHc----C-CeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeee
Confidence            999998653    3 3899999986654322           356899999999999887643       4788889998


Q ss_pred             CCC
Q psy3252         327 DTP  329 (475)
Q Consensus       327 ~T~  329 (475)
                      .++
T Consensus       164 ~G~  166 (292)
T 1vl0_A          164 YGD  166 (292)
T ss_dssp             ESS
T ss_pred             eCC
Confidence            876

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.70  E-value=2.4e-16  Score=155.23  Aligned_cols=160  Identities=17%  Similarity=0.110  Sum_probs=118.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++++||||||+|+||.+++++|+++|+      +...                .                   ...+.
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~----------------~-------------------~~~~~   41 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE----------------D-------------------WVFVS   41 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC----------------E-------------------EEECC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc----------------c-------------------ccccC
Confidence            46688999999999999999999999998      1000                0                   02234


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+++.++++..     ++|+|||+||.......   +.++....                     +++|+.
T Consensus        42 ~~~~D~~-d~~~~~~~~~~~-----~~d~Vih~A~~~~~~~~---~~~~~~~~---------------------~~~nv~   91 (319)
T 4b8w_A           42 SKDADLT-DTAQTRALFEKV-----QPTHVIHLAAMVGGLFR---NIKYNLDF---------------------WRKNVH   91 (319)
T ss_dssp             TTTCCTT-SHHHHHHHHHHS-----CCSEEEECCCCCCCHHH---HTTCHHHH---------------------HHHHHH
T ss_pred             ceecccC-CHHHHHHHHhhc-----CCCEEEECceecccccc---cccCHHHH---------------------HHHHHH
Confidence            4578999 999888887753     69999999997431111   11122223                     899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEecccccccc----------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLG----------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~----------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                      |+.++++++..    .+.++||++||...+-.                .|....|+.||.+.+.+++.++.+.   |+++
T Consensus        92 gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~  164 (319)
T 4b8w_A           92 MNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTF  164 (319)
T ss_dssp             HHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEE
T ss_pred             HHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCE
Confidence            99999888743    34568999999865421                1222369999999999999988774   8999


Q ss_pred             EEEeCCCCCCCCCc
Q psy3252         319 TLCLPPDTDTPGFE  332 (475)
Q Consensus       319 n~V~PG~v~T~~~~  332 (475)
                      +.+.||.|.+|...
T Consensus       165 ~ilRp~~v~Gp~~~  178 (319)
T 4b8w_A          165 TAVIPTNVFGPHDN  178 (319)
T ss_dssp             EEEEECEEECTTCC
T ss_pred             EEEeeccccCCCCC
Confidence            99999999998643

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.69  E-value=1.7e-16  Score=157.71  Aligned_cols=155  Identities=12%  Similarity=0.075  Sum_probs=120.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +++++|||||+|+||.+++++|+++|++|++++|+.                                            
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------------------------------   37 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------------------------------   37 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------------------------------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------------------------------
Confidence            357899999999999999999999999999988752                                            


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++..     ++|+|||+||.....   +...++.+..                     +++|+.++
T Consensus        38 ~~D~~-d~~~~~~~~~~~-----~~d~vih~a~~~~~~---~~~~~~~~~~---------------------~~~n~~~~   87 (321)
T 1e6u_A           38 ELNLL-DSRAVHDFFASE-----RIDQVYLAAAKVGGI---VANNTYPADF---------------------IYQNMMIE   87 (321)
T ss_dssp             TCCTT-CHHHHHHHHHHH-----CCSEEEECCCCCCCH---HHHHHCHHHH---------------------HHHHHHHH
T ss_pred             cCCcc-CHHHHHHHHHhc-----CCCEEEEcCeecCCc---chhhhCHHHH---------------------HHHHHHHH
Confidence            15898 888888887754     799999999965311   0111222333                     89999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEecccccccc----------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLG----------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~----------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                      .++++++..    .+.+++|++||...+..                .|....|+.||.+.+.+++.++.+.   |+++++
T Consensus        88 ~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i  160 (321)
T 1e6u_A           88 SNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRS  160 (321)
T ss_dssp             HHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEE
T ss_pred             HHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEE
Confidence            999988754    34468999999866421                1112589999999999999988764   899999


Q ss_pred             EeCCCCCCCCCc
Q psy3252         321 CLPPDTDTPGFE  332 (475)
Q Consensus       321 V~PG~v~T~~~~  332 (475)
                      |.||.|.+|...
T Consensus       161 lrp~~v~G~~~~  172 (321)
T 1e6u_A          161 VMPTNLYGPHDN  172 (321)
T ss_dssp             EEECEEESTTCC
T ss_pred             EEeCCcCCcCCC
Confidence            999999998543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.68  E-value=5.1e-16  Score=163.98  Aligned_cols=184  Identities=16%  Similarity=0.134  Sum_probs=127.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHc---CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKR---GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~---Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ...++|+||||||+|+||.+++++|+++   |++|++++|+.+... ..+++.+...............        ...
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~--------~~~  139 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKE--------LAA  139 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHH--------HHT
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhh--------hcc
Confidence            3467899999999999999999999999   999999999876543 2333333221100000000000        001


Q ss_pred             ceEEEEEeecCCCH------HHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccc
Q psy3252         171 RFIEYVSLDISKDY------ENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWR  244 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~------~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (475)
                      .++.++.+|++ +.      +.+..+++       ++|+||||||.....        .++.                  
T Consensus       140 ~~v~~v~~Dl~-~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~~--------~~~~------------------  185 (478)
T 4dqv_A          140 DRLEVVAGDKS-EPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNAF--------PYHE------------------  185 (478)
T ss_dssp             TTEEEEECCTT-SGGGGCCHHHHHHHHH-------HCCEEEECCSSCSBS--------SCCE------------------
T ss_pred             CceEEEEeECC-CcccCCCHHHHHHHHc-------CCCEEEECccccCCc--------CHHH------------------
Confidence            46889999998 43      34454443       589999999976431        1112                  


Q ss_pred             cchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCC----------------------ChhhHHHHHHHHH
Q psy3252         245 SWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYG----------------------LAAYTSSKFALKG  302 (475)
Q Consensus       245 ~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~----------------------~~~Y~aSKaAl~~  302 (475)
                         .+++|+.|+.++++++.    +.+.++||++||...+.....                      ...|+.||.+.+.
T Consensus       186 ---~~~~Nv~gt~~ll~aa~----~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~  258 (478)
T 4dqv_A          186 ---LFGPNVAGTAELIRIAL----TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEV  258 (478)
T ss_dssp             ---EHHHHHHHHHHHHHHHT----SSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHH----hCCCCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHH
Confidence               28999999999998874    334468999999765332111                      1339999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         303 FAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       303 l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +++.++.+.   |+++++|.||.|.++.
T Consensus       259 ~~~~~~~~~---gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          259 LLREANDLC---ALPVAVFRCGMILADT  283 (478)
T ss_dssp             HHHHHHHHH---CCCEEEEEECEEECCS
T ss_pred             HHHHHHHHh---CCCeEEEECceeeCCC
Confidence            999988764   8999999999999873

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.68  E-value=1.3e-16  Score=158.34  Aligned_cols=156  Identities=19%  Similarity=0.201  Sum_probs=121.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +||||||+|+||.+++++|+++  |++|++++|+....+                                   .+.++.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------------------------------~~~~~~   45 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------------------------------GIKFIT   45 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------------------------------TCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------------------------------CceEEE
Confidence            3899999999999999999999  899999998753211                                   134688


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++.     .++|+||||||.....     ..++.+..                     +++|+.++.
T Consensus        46 ~D~~-d~~~~~~~~~~-----~~~d~vih~a~~~~~~-----~~~~~~~~---------------------~~~n~~~~~   93 (317)
T 3ajr_A           46 LDVS-NRDEIDRAVEK-----YSIDAIFHLAGILSAK-----GEKDPALA---------------------YKVNMNGTY   93 (317)
T ss_dssp             CCTT-CHHHHHHHHHH-----TTCCEEEECCCCCHHH-----HHHCHHHH---------------------HHHHHHHHH
T ss_pred             ecCC-CHHHHHHHHhh-----cCCcEEEECCcccCCc-----cccChHHH---------------------hhhhhHHHH
Confidence            9999 99888888764     2799999999975310     11223333                     899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCC------------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIY------------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      ++++++.+    .+.++||++||...+.+..            ....|+.||++.+.+++.++.+   +|++++++.|+.
T Consensus        94 ~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~  166 (317)
T 3ajr_A           94 NILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEK---FGLDVRSLRYPG  166 (317)
T ss_dssp             HHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECE
T ss_pred             HHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHh---cCCeEEEEecCc
Confidence            99998754    3557999999987654321            3578999999999999988766   489999998777


Q ss_pred             CCCC
Q psy3252         326 TDTP  329 (475)
Q Consensus       326 v~T~  329 (475)
                      +..+
T Consensus       167 ~~g~  170 (317)
T 3ajr_A          167 IISY  170 (317)
T ss_dssp             EECS
T ss_pred             Eecc
Confidence            7665

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.67  E-value=2.9e-16  Score=153.54  Aligned_cols=216  Identities=15%  Similarity=0.069  Sum_probs=143.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      |++|||||+|+||.+++++|+++  |++|++++|+.++.+.+.    .                          ..+.++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--------------------------~~~~~~   50 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--------------------------QGVEVR   50 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--------------------------TTCEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--------------------------cCCeEE
Confidence            46899999999999999999999  999999999876554322    1                          235678


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++       .+|++|||||...       .                            -++|+.++
T Consensus        51 ~~D~~-d~~~l~~~~~-------~~d~vi~~a~~~~-------~----------------------------~~~n~~~~   87 (287)
T 2jl1_A           51 HGDYN-QPESLQKAFA-------GVSKLLFISGPHY-------D----------------------------NTLLIVQH   87 (287)
T ss_dssp             ECCTT-CHHHHHHHTT-------TCSEEEECCCCCS-------C----------------------------HHHHHHHH
T ss_pred             EeccC-CHHHHHHHHh-------cCCEEEEcCCCCc-------C----------------------------chHHHHHH
Confidence            99999 9888777654       6899999999521       1                            12577888


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK  336 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~  336 (475)
                      .++++++.    +.+.++||++||..+. .  ....|+.+|.+.+.+++.       .|++++.+.||.+.++.......
T Consensus        88 ~~l~~a~~----~~~~~~~v~~Ss~~~~-~--~~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~  153 (287)
T 2jl1_A           88 ANVVKAAR----DAGVKHIAYTGYAFAE-E--SIIPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLR  153 (287)
T ss_dssp             HHHHHHHH----HTTCSEEEEEEETTGG-G--CCSTHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGH
T ss_pred             HHHHHHHH----HcCCCEEEEECCCCCC-C--CCCchHHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHH
Confidence            88877764    4455799999998764 2  234899999999988752       68999999999987764221110


Q ss_pred             C----CccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHh
Q psy3252         337 S----KPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       337 ~----~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~  412 (475)
                      .    ................++|++++.+.++.. + . . .|          ....+. ....++..++++.+.+.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~-~-~-~-~g----------~~~~i~-~~~~~s~~e~~~~i~~~~g  218 (287)
T 2jl1_A          154 ASTESGAIVTNAGSGIVNSVTRNELALAAATVLTE-E-G-H-EN----------KTYNLV-SNQPWTFDELAQILSEVSG  218 (287)
T ss_dssp             HHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTS-S-S-C-TT----------EEEEEC-CSSCBCHHHHHHHHHHHHS
T ss_pred             HHhhCCceeccCCCCccCccCHHHHHHHHHHHhcC-C-C-C-CC----------cEEEec-CCCcCCHHHHHHHHHHHHC
Confidence            0    000000001123456778888776554422 1 0 0 11          011121 1225677888888877765


Q ss_pred             cCCe
Q psy3252         413 KGNY  416 (475)
Q Consensus       413 ~g~~  416 (475)
                      +.-.
T Consensus       219 ~~~~  222 (287)
T 2jl1_A          219 KKVV  222 (287)
T ss_dssp             SCCE
T ss_pred             Ccce
Confidence            5433

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.67  E-value=2.4e-16  Score=154.29  Aligned_cols=143  Identities=16%  Similarity=0.191  Sum_probs=113.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|+||.+++++|+++|++|++++|.                                             .+|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------------------------------~~D   41 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------------------------------LLD   41 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------------------------------TSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------------------------------ccC
Confidence            89999999999999999999999999999982                                             158


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++..     ++|+||||||.......    .++.+..                     +++|+.++.++
T Consensus        42 ~~-d~~~~~~~~~~~-----~~d~vi~~a~~~~~~~~----~~~~~~~---------------------~~~n~~~~~~l   90 (287)
T 3sc6_A           42 IT-NISQVQQVVQEI-----RPHIIIHCAAYTKVDQA----EKERDLA---------------------YVINAIGARNV   90 (287)
T ss_dssp             TT-CHHHHHHHHHHH-----CCSEEEECCCCCCHHHH----TTCHHHH---------------------HHHHTHHHHHH
T ss_pred             CC-CHHHHHHHHHhc-----CCCEEEECCcccChHHH----hcCHHHH---------------------HHHHHHHHHHH
Confidence            88 999988888765     79999999997642111    1223333                     89999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++++.+.    + .+||++||...+.+.           .....|+.+|.+.+.+++.++.       +++.+.||.|.+
T Consensus        91 ~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G  158 (287)
T 3sc6_A           91 AVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYG  158 (287)
T ss_dssp             HHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEEC
T ss_pred             HHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecC
Confidence            9988543    2 479999998665332           2356899999999999887643       468899999998


Q ss_pred             CC
Q psy3252         329 PG  330 (475)
Q Consensus       329 ~~  330 (475)
                      |.
T Consensus       159 ~~  160 (287)
T 3sc6_A          159 KY  160 (287)
T ss_dssp             SS
T ss_pred             CC
Confidence            74

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.67  E-value=3.3e-16  Score=152.83  Aligned_cols=142  Identities=18%  Similarity=0.145  Sum_probs=105.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++||||+|+||.+++++|+++  |++|++++|+.++.+.+.    .                          ..+.++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--------------------------~~~~~~~   50 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--------------------------QGITVRQ   50 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--------------------------TTCEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--------------------------CCCeEEE
Confidence            3799999999999999999999  999999999876554322    1                          2356789


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+++.++++       .+|++|||||...                                     +.|+.++.
T Consensus        51 ~D~~-d~~~~~~~~~-------~~d~vi~~a~~~~-------------------------------------~~~~~~~~   85 (286)
T 2zcu_A           51 ADYG-DEAALTSALQ-------GVEKLLLISSSEV-------------------------------------GQRAPQHR   85 (286)
T ss_dssp             CCTT-CHHHHHHHTT-------TCSEEEECC---------------------------------------------CHHH
T ss_pred             cCCC-CHHHHHHHHh-------CCCEEEEeCCCCc-------------------------------------hHHHHHHH
Confidence            9999 9888777654       6899999998521                                     12344555


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++++++    .+.+.++||++||..+. .  ....|+.+|.+++.+++.       .|++++.|.||.+.+++
T Consensus        86 ~l~~a~----~~~~~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A           86 NVINAA----KAAGVKFIAYTSLLHAD-T--SPLGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENY  144 (286)
T ss_dssp             HHHHHH----HHHTCCEEEEEEETTTT-T--CCSTTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHH
T ss_pred             HHHHHH----HHcCCCEEEEECCCCCC-C--CcchhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhh
Confidence            555554    44456799999998765 2  235899999999988753       58999999999887653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.66  E-value=3.6e-17  Score=160.35  Aligned_cols=150  Identities=13%  Similarity=0.081  Sum_probs=114.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++++||||| +|+||.+++++|+++|++|++++|+.+.+.                                  ..+.++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------------------------~~~~~~   46 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP----------------------------------AGVQTL   46 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC----------------------------------TTCCEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc----------------------------------cCCceE
Confidence            457899999 599999999999999999999999865310                                  346688


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++      +++|+|||+||...         .+.+..                     +++|+.++
T Consensus        47 ~~Dl~-d~~~~~~~~~------~~~d~vih~a~~~~---------~~~~~~---------------------~~~n~~~~   89 (286)
T 3gpi_A           47 IADVT-RPDTLASIVH------LRPEILVYCVAASE---------YSDEHY---------------------RLSYVEGL   89 (286)
T ss_dssp             ECCTT-CGGGCTTGGG------GCCSEEEECHHHHH---------HC--------------------------CCSHHHH
T ss_pred             EccCC-ChHHHHHhhc------CCCCEEEEeCCCCC---------CCHHHH---------------------HHHHHHHH
Confidence            99999 8887776654      36999999998631         112222                     88999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      .++++++.    +.+.++||++||...+...           .....|+.||.+.+.+ +..        ++++.+.||.
T Consensus        90 ~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~  156 (286)
T 3gpi_A           90 RNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSG  156 (286)
T ss_dssp             HHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECE
T ss_pred             HHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEeccc
Confidence            99888764    4455799999998654322           1356899999998887 442        8899999999


Q ss_pred             CCCCCC
Q psy3252         326 TDTPGF  331 (475)
Q Consensus       326 v~T~~~  331 (475)
                      |.++..
T Consensus       157 v~G~~~  162 (286)
T 3gpi_A          157 IYGPGR  162 (286)
T ss_dssp             EEBTTB
T ss_pred             ccCCCc
Confidence            998853

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.66  E-value=2.7e-16  Score=172.44  Aligned_cols=166  Identities=15%  Similarity=0.093  Sum_probs=125.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++++||||||+|+||.+++++|+++ |++|++++|+.+..+.+.    .                         ..++.
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----~-------------------------~~~v~  363 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N-------------------------HPHFH  363 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----T-------------------------CTTEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----c-------------------------CCceE
Confidence            46789999999999999999999998 899999999875432110    0                         03578


Q ss_pred             EEEeecCCCHHH-HHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYEN-IRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~-v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.+|++ |.++ +.++++       ++|+||||||.......    .++.+..                     +++|+
T Consensus       364 ~v~~Dl~-d~~~~~~~~~~-------~~D~Vih~Aa~~~~~~~----~~~~~~~---------------------~~~Nv  410 (660)
T 1z7e_A          364 FVEGDIS-IHSEWIEYHVK-------KCDVVLPLVAIATPIEY----TRNPLRV---------------------FELDF  410 (660)
T ss_dssp             EEECCTT-TCHHHHHHHHH-------HCSEEEECCCCCCTHHH----HHSHHHH---------------------HHHHT
T ss_pred             EEECCCC-CcHHHHHHhhc-------CCCEEEECceecCcccc----ccCHHHH---------------------HHhhh
Confidence            8999999 6543 555543       58999999997532111    1223333                     89999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccC------------------CCChhhHHHHHHHHHHHHHHHHHHccCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGI------------------YGLAAYTSSKFALKGFAEALYMEVKQSG  315 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------------~~~~~Y~aSKaAl~~l~~sLa~El~~~g  315 (475)
                      .|+.++++++..    .+ ++||++||...+...                  .....|+.||.+.+.+++.++.+.   |
T Consensus       411 ~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---g  482 (660)
T 1z7e_A          411 EENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G  482 (660)
T ss_dssp             HHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---C
T ss_pred             HHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---C
Confidence            999999888754    34 789999997664321                  122379999999999999998774   8


Q ss_pred             cEEEEEeCCCCCCCCC
Q psy3252         316 LTITLCLPPDTDTPGF  331 (475)
Q Consensus       316 IrVn~V~PG~v~T~~~  331 (475)
                      +++++|.||.|.++..
T Consensus       483 i~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          483 LQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             CCEEEEEECSEESTTS
T ss_pred             CCEEEECCCcccCCCc
Confidence            9999999999999864

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.66  E-value=1.2e-15  Score=150.36  Aligned_cols=222  Identities=18%  Similarity=0.091  Sum_probs=141.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|+++||||+|+||.+++++|+++| ++|++++|+.++...  ..+..                          ..+.++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--------------------------~~~~~~   56 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--------------------------QGAEVV   56 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--------------------------TTCEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--------------------------CCCEEE
Confidence            4789999999999999999999999 999999998765421  22222                          236678


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ |.+++.++++       .+|+||||||.....            .                     .+.|+.++
T Consensus        57 ~~D~~-d~~~l~~~~~-------~~d~vi~~a~~~~~~------------~---------------------~~~~~~~~   95 (299)
T 2wm3_A           57 QGDQD-DQVIMELALN-------GAYATFIVTNYWESC------------S---------------------QEQEVKQG   95 (299)
T ss_dssp             ECCTT-CHHHHHHHHT-------TCSEEEECCCHHHHT------------C---------------------HHHHHHHH
T ss_pred             EecCC-CHHHHHHHHh-------cCCEEEEeCCCCccc------------c---------------------chHHHHHH
Confidence            99999 9888887765       689999999843110            0                     34455544


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccc--cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANL--GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~--~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      .++    ++.+.+.+.++||++||.....  .......|+.+|.+++.+.+.       .|++++.|+||++.+++....
T Consensus        96 ~~~----~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~  164 (299)
T 2wm3_A           96 KLL----ADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHF  164 (299)
T ss_dssp             HHH----HHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTT
T ss_pred             HHH----HHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhc
Confidence            444    4445555668999966644321  111246899999999988764       489999999999998854321


Q ss_pred             ccCC-cccc--ccccccC----CCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHH
Q psy3252         335 EKSK-PRET--SLISQTG----GLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQL  407 (475)
Q Consensus       335 ~~~~-~~~~--~~~~~~~----~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i  407 (475)
                      .... ....  ....+.+    ....++|++++.+.++.. +.. . .|          ....+.+  ..++..++++.+
T Consensus       165 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~-~~~-~-~g----------~~~~~~g--~~~s~~e~~~~~  229 (299)
T 2wm3_A          165 LPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKM-PEK-Y-VG----------QNIGLST--CRHTAEEYAALL  229 (299)
T ss_dssp             CCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHS-HHH-H-TT----------CEEECCS--EEECHHHHHHHH
T ss_pred             CCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcC-hhh-h-CC----------eEEEeee--ccCCHHHHHHHH
Confidence            1100 0000  0011111    245788888877665432 100 0 00          0111222  246888888888


Q ss_pred             HHHHhcC
Q psy3252         408 LEDALKG  414 (475)
Q Consensus       408 ~~ai~~g  414 (475)
                      .+.+.+.
T Consensus       230 ~~~~g~~  236 (299)
T 2wm3_A          230 TKHTRKV  236 (299)
T ss_dssp             HHHHSSC
T ss_pred             HHHHCCC
Confidence            7777543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.64  E-value=8.4e-16  Score=163.30  Aligned_cols=173  Identities=12%  Similarity=0.103  Sum_probs=124.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH---HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK---LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~---l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .++||||||+|+||.+++++|.+.|++|++++|+...   .+.+.+.+.......          ..     .....++.
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~----------~~-----~~~~~~v~  214 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEE----------TV-----EMMLSNIE  214 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHH----------HH-----HHHSTTEE
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccc----------cc-----hhccCceE
Confidence            4799999999999999999999999999999998763   333434333221000          00     00015689


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.+++.        ...++|+||||||....       ..+.+..                     +++|+.
T Consensus       215 ~v~~Dl~-d~~~l~--------~~~~~D~Vih~Aa~~~~-------~~~~~~~---------------------~~~Nv~  257 (508)
T 4f6l_B          215 VIVGDFE-CMDDVV--------LPENMDTIIHAGARTDH-------FGDDDEF---------------------EKVNVQ  257 (508)
T ss_dssp             EEEEBTT-BCSSCC--------CSSCCSEEEECCCC---------------CC---------------------HHHHHH
T ss_pred             EEecCCc-ccccCC--------CccCCCEEEECCceecC-------CCCHHHH---------------------hhhHHH
Confidence            9999999 766655        34689999999997531       1223333                     899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccc--ccc----------------CCCChhhHHHHHHHHHHHHHHHHHHccCCc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAA--NLG----------------IYGLAAYTSSKFALKGFAEALYMEVKQSGL  316 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~--~~~----------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gI  316 (475)
                      |+.++++++..     +..++|++||...  ...                ......|+.||.+.+.+++.++.    .|+
T Consensus       258 gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi  328 (508)
T 4f6l_B          258 GTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGL  328 (508)
T ss_dssp             HHHHHHHHHHT-----TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTC
T ss_pred             HHHHHHHHHHh-----CCCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCC
Confidence            99999998754     3478999999876  100                11457899999999998887643    699


Q ss_pred             EEEEEeCCCCCCCCC
Q psy3252         317 TITLCLPPDTDTPGF  331 (475)
Q Consensus       317 rVn~V~PG~v~T~~~  331 (475)
                      +++++.||.|.++..
T Consensus       329 ~~~ilRp~~v~G~~~  343 (508)
T 4f6l_B          329 DGRIVRVGNLTSPYN  343 (508)
T ss_dssp             EEEEEEECCEESCSS
T ss_pred             CEEEEecceeccCCC
Confidence            999999999998853

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.64  E-value=4e-16  Score=153.45  Aligned_cols=147  Identities=14%  Similarity=0.069  Sum_probs=114.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ++|||||+|+||.+++++|+ +|++|++++|+..                                         ++.+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------------------------------~~~~D   39 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------------------------------EFCGD   39 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------------------------------SSCCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------------------------------ccccc
Confidence            68999999999999999999 8999999999751                                         14689


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+++.++++..     ++|+|||+||......    ..++.+..                     +++|+.++.++
T Consensus        40 ~~-d~~~~~~~~~~~-----~~d~vih~a~~~~~~~----~~~~~~~~---------------------~~~n~~~~~~l   88 (299)
T 1n2s_A           40 FS-NPKGVAETVRKL-----RPDVIVNAAAHTAVDK----AESEPELA---------------------QLLNATSVEAI   88 (299)
T ss_dssp             TT-CHHHHHHHHHHH-----CCSEEEECCCCCCHHH----HTTCHHHH---------------------HHHHTHHHHHH
T ss_pred             CC-CHHHHHHHHHhc-----CCCEEEECcccCCHhh----hhcCHHHH---------------------HHHHHHHHHHH
Confidence            99 988888887754     6999999999653210    11122333                     89999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccCC-----------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGIY-----------GLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-----------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      ++++..    .+ .++|++||...+.+..           ....|+.+|++.+.+++.++.       +++.+.||.+.+
T Consensus        89 ~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G  156 (299)
T 1n2s_A           89 AKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYA  156 (299)
T ss_dssp             HHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEEC
T ss_pred             HHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecC
Confidence            998742    23 4899999986643322           246899999999999877642       789999999999


Q ss_pred             CCC
Q psy3252         329 PGF  331 (475)
Q Consensus       329 ~~~  331 (475)
                      +..
T Consensus       157 ~~~  159 (299)
T 1n2s_A          157 GKG  159 (299)
T ss_dssp             SSS
T ss_pred             CCc
Confidence            853

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.62  E-value=6.1e-15  Score=149.63  Aligned_cols=149  Identities=15%  Similarity=0.182  Sum_probs=110.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+++++||||+|+||.+++++|+++|++|++++|+.++..  .+.+...                         ..+.++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~-------------------------~~v~~v   56 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI-------------------------PNVTLF   56 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS-------------------------TTEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc-------------------------CCcEEE
Confidence            4678999999999999999999999999999999876542  1222211                         247788


Q ss_pred             Eee-cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         177 SLD-ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       177 ~~D-vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      .+| ++ |.+++.++++       .+|++|||++...                                    .+.|..+
T Consensus        57 ~~D~l~-d~~~l~~~~~-------~~d~Vi~~a~~~~------------------------------------~~~~~~~   92 (352)
T 1xgk_A           57 QGPLLN-NVPLMDTLFE-------GAHLAFINTTSQA------------------------------------GDEIAIG   92 (352)
T ss_dssp             ESCCTT-CHHHHHHHHT-------TCSEEEECCCSTT------------------------------------SCHHHHH
T ss_pred             ECCccC-CHHHHHHHHh-------cCCEEEEcCCCCC------------------------------------cHHHHHH
Confidence            999 99 9888887764       5899999997431                                    1124433


Q ss_pred             HHHHHHHHHHHHHhCC-CCeEEEecccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRG-RGCIVITASQA-ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~-~g~IV~iSS~a-~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                       .++++    .+.+.+ .++||++||.. +..+.+....|+.||++++.+++.       .|+++++|+||.+-+
T Consensus        93 -~~l~~----aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~-------~gi~~~ivrpg~~g~  155 (352)
T 1xgk_A           93 -KDLAD----AAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNN  155 (352)
T ss_dssp             -HHHHH----HHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGG
T ss_pred             -HHHHH----HHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHH-------cCCCEEEEecceecC
Confidence             34444    444555 57999999986 344445567899999999998865       389999999997643

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.60  E-value=2.2e-16  Score=156.33  Aligned_cols=163  Identities=19%  Similarity=0.126  Sum_probs=111.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++++||||||+|+||.+++++|+++|++|++++|+........+.+....                      ....+.+
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----------------------~~~~~~~   62 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL----------------------EKPVLEL   62 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE----------------------CSCGGGC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc----------------------cCCCeeE
Confidence            457899999999999999999999999999999997641000000000000                      0011222


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++                  ++|+|||+||........+..    .                     ..++ |+.+
T Consensus        63 ~~~Dl~------------------~~d~vi~~a~~~~~~~~~~~~----~---------------------~~~~-n~~~   98 (321)
T 3vps_A           63 EERDLS------------------DVRLVYHLASHKSVPRSFKQP----L---------------------DYLD-NVDS   98 (321)
T ss_dssp             CHHHHT------------------TEEEEEECCCCCCHHHHTTST----T---------------------TTHH-HHHH
T ss_pred             EeCccc------------------cCCEEEECCccCChHHHHhCH----H---------------------HHHH-HHHH
Confidence            333332                  799999999976421111111    1                     1277 9999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCc-EEEEEeC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGL-TITLCLP  323 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gI-rVn~V~P  323 (475)
                      +.++++++...    +.++||++||...+...           .....|+.||.+.+.+++.++.+   +|+ +++.+.|
T Consensus        99 ~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp  171 (321)
T 3vps_A           99 GRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRF  171 (321)
T ss_dssp             HHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEE
T ss_pred             HHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEe
Confidence            99998887543    34689999998765332           22578999999999999988775   689 9999999


Q ss_pred             CCCCCCCC
Q psy3252         324 PDTDTPGF  331 (475)
Q Consensus       324 G~v~T~~~  331 (475)
                      |.+.+|..
T Consensus       172 ~~v~G~~~  179 (321)
T 3vps_A          172 FNVYGPGE  179 (321)
T ss_dssp             CEEECTTC
T ss_pred             ccccCcCC
Confidence            99999853

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.58  E-value=3.2e-14  Score=138.93  Aligned_cols=140  Identities=14%  Similarity=0.046  Sum_probs=105.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++|||||| |+||.+++++|+++|++|++++|+.++.+.+..                              ..+.++.+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------------------------------~~~~~~~~   54 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------------------------------SGAEPLLW   54 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------------------------------TTEEEEES
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------------------------------CCCeEEEe
Confidence            68999998 999999999999999999999999877654332                              34788999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+            +..+|+|||+||.....       +.                         .         
T Consensus        55 D~~-d~~------------~~~~d~vi~~a~~~~~~-------~~-------------------------~---------   80 (286)
T 3ius_A           55 PGE-EPS------------LDGVTHLLISTAPDSGG-------DP-------------------------V---------   80 (286)
T ss_dssp             SSS-CCC------------CTTCCEEEECCCCBTTB-------CH-------------------------H---------
T ss_pred             ccc-ccc------------cCCCCEEEECCCccccc-------cH-------------------------H---------
Confidence            999 722            45899999999965321       00                         1         


Q ss_pred             HHHHHHHHHHh--CCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         259 MTKALVEGMKQ--RGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       259 l~~~~lp~m~~--~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                       ++.++..+.+  .+..++|++||...+-..           .....|+.+|.+.+.+.+.+      .|++++++.||.
T Consensus        81 -~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~  153 (286)
T 3ius_A           81 -LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAG  153 (286)
T ss_dssp             -HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECE
T ss_pred             -HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccc
Confidence             1223333444  345789999997654221           12357999999999888776      689999999999


Q ss_pred             CCCCC
Q psy3252         326 TDTPG  330 (475)
Q Consensus       326 v~T~~  330 (475)
                      +.++.
T Consensus       154 v~G~~  158 (286)
T 3ius_A          154 IYGPG  158 (286)
T ss_dssp             EEBTT
T ss_pred             eECCC
Confidence            99885

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.56  E-value=2.9e-14  Score=140.54  Aligned_cols=145  Identities=19%  Similarity=0.194  Sum_probs=102.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-------hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-------KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +++++||||+|+||.+++++|+++|++|++++|+.       ++.+.+ .++..                          
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--------------------------   54 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--------------------------   54 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--------------------------
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--------------------------
Confidence            46899999999999999999999999999999986       444432 22322                          


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ..+.++.+|++ |.+++.++++       .+|+||||||...              .                       
T Consensus        55 ~~v~~v~~D~~-d~~~l~~~~~-------~~d~vi~~a~~~~--------------~-----------------------   89 (307)
T 2gas_A           55 LGVILLEGDIN-DHETLVKAIK-------QVDIVICAAGRLL--------------I-----------------------   89 (307)
T ss_dssp             TTCEEEECCTT-CHHHHHHHHT-------TCSEEEECSSSSC--------------G-----------------------
T ss_pred             CCCEEEEeCCC-CHHHHHHHHh-------CCCEEEECCcccc--------------c-----------------------
Confidence            23678899999 9888877765       6999999999642              0                       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccc------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRG-RGCIVITASQAANL------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                         .+..+++++    +.+.+ .++||.  |..+..      ..|....| .+|++++.+.+.       .|++++.|+|
T Consensus        90 ---~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp  152 (307)
T 2gas_A           90 ---EDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCC  152 (307)
T ss_dssp             ---GGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEEC
T ss_pred             ---ccHHHHHHH----HHhcCCceEEee--cccccCcccccCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEc
Confidence               011223333    34444 567773  433321      12334579 999998887653       4799999999


Q ss_pred             CCCCCCCC
Q psy3252         324 PDTDTPGF  331 (475)
Q Consensus       324 G~v~T~~~  331 (475)
                      |.+.+++.
T Consensus       153 ~~~~~~~~  160 (307)
T 2gas_A          153 HAFTGYFL  160 (307)
T ss_dssp             CEETTTTG
T ss_pred             ceeecccc
Confidence            99988754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.55  E-value=5.1e-15  Score=145.05  Aligned_cols=145  Identities=18%  Similarity=0.134  Sum_probs=103.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +||||||+|+||.+++++|++. |++|++++|+.++...+.                              ...+.++.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~------------------------------~~~v~~~~~   51 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW------------------------------RGKVSVRQL   51 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG------------------------------BTTBEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh------------------------------hCCCEEEEc
Confidence            5899999999999999999998 999999999976543210                              035788999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+++.++++       .+|+||||||....                                   ...|+.++.+
T Consensus        52 D~~-d~~~l~~~~~-------~~d~vi~~a~~~~~-----------------------------------~~~~~~~~~~   88 (289)
T 3e48_A           52 DYF-NQESMVEAFK-------GMDTVVFIPSIIHP-----------------------------------SFKRIPEVEN   88 (289)
T ss_dssp             CTT-CHHHHHHHTT-------TCSEEEECCCCCCS-----------------------------------HHHHHHHHHH
T ss_pred             CCC-CHHHHHHHHh-------CCCEEEEeCCCCcc-----------------------------------chhhHHHHHH
Confidence            999 9888877664       78999999986421                                   2235445444


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                          +++.+++.+.++||++||.......    .|..++..     ..+...+...|++++.|.||.+.+++
T Consensus        89 ----l~~aa~~~gv~~iv~~Ss~~~~~~~----~~~~~~~~-----~~~e~~~~~~g~~~~ilrp~~~~~~~  147 (289)
T 3e48_A           89 ----LVYAAKQSGVAHIIFIGYYADQHNN----PFHMSPYF-----GYASRLLSTSGIDYTYVRMAMYMDPL  147 (289)
T ss_dssp             ----HHHHHHHTTCCEEEEEEESCCSTTC----CSTTHHHH-----HHHHHHHHHHCCEEEEEEECEESTTH
T ss_pred             ----HHHHHHHcCCCEEEEEcccCCCCCC----CCccchhH-----HHHHHHHHHcCCCEEEEecccccccc
Confidence                4445566666899999996543322    23333321     12333445679999999999999874

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.52  E-value=1.8e-13  Score=137.86  Aligned_cols=227  Identities=13%  Similarity=0.062  Sum_probs=138.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh----hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE----KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~----~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ..++||||||+|+||.+++++|++.|++|++++|+.    ++.+. .+.+..                          ..
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~~--------------------------~~   61 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALED--------------------------KG   61 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHHH--------------------------TT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHHh--------------------------CC
Confidence            356899999999999999999999999999999976    33322 222222                          34


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.+++.+++++.     ++|+|||+||..                                        |
T Consensus        62 v~~~~~Dl~-d~~~l~~~~~~~-----~~d~Vi~~a~~~----------------------------------------n   95 (346)
T 3i6i_A           62 AIIVYGLIN-EQEAMEKILKEH-----EIDIVVSTVGGE----------------------------------------S   95 (346)
T ss_dssp             CEEEECCTT-CHHHHHHHHHHT-----TCCEEEECCCGG----------------------------------------G
T ss_pred             cEEEEeecC-CHHHHHHHHhhC-----CCCEEEECCchh----------------------------------------h
Confidence            778999999 999888887653     799999999852                                        3


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CCeEEEeccccccc----cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRG-RGCIVITASQAANL----GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~----~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      +.++.++++++.    +.+ ..++|+ |+.....    +.+....|+.+|.+++.+.+.       .|++++.|+||.+.
T Consensus        96 ~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~  163 (346)
T 3i6i_A           96 ILDQIALVKAMK----AVGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIA  163 (346)
T ss_dssp             GGGHHHHHHHHH----HHCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEES
T ss_pred             HHHHHHHHHHHH----HcCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccc
Confidence            344455555553    334 456665 4432211    123446899999998877654       68999999999998


Q ss_pred             CCCCcccccCCc---ccccc--c---cccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCC
Q psy3252         328 TPGFENEEKSKP---RETSL--I---SQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYR  399 (475)
Q Consensus       328 T~~~~~~~~~~~---~~~~~--~---~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  399 (475)
                      +...........   .....  .   .....+...+|++++.+.++....   ..++           ...+.+....++
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~---~~~~-----------~~~i~g~~~~~s  229 (346)
T 3i6i_A          164 SWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR---TLNK-----------SVHFRPSCNCLN  229 (346)
T ss_dssp             SCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG---GTTE-----------EEECCCGGGEEC
T ss_pred             cccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc---ccCe-----------EEEEeCCCCCCC
Confidence            864332211100   00000  0   011224567777777665443210   0000           111211123567


Q ss_pred             hHHHHHHHHHHHhcCCeeEEeCc
Q psy3252         400 PEVVAKQLLEDALKGNYFSTVGL  422 (475)
Q Consensus       400 ~e~vA~~i~~ai~~g~~~~~~~~  422 (475)
                      ..++++.+.+.+.+.-....++.
T Consensus       230 ~~e~~~~~~~~~g~~~~~~~~~~  252 (346)
T 3i6i_A          230 INELASVWEKKIGRTLPRVTVTE  252 (346)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECH
T ss_pred             HHHHHHHHHHHHCCCCceEecCH
Confidence            78888877777665444444443

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.51  E-value=1.1e-13  Score=140.68  Aligned_cols=135  Identities=21%  Similarity=0.185  Sum_probs=108.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +||||||+|+||.+++++|+++|+ +|+.++|+                                               
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------------------------------   34 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------------------------------   34 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------------------------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------------------------------
Confidence            699999999999999999999998 77776663                                               


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                        + |.+++.++++       .+|+|||+||.....        +....                     +++|+.++.+
T Consensus        35 --~-d~~~l~~~~~-------~~d~Vih~a~~~~~~--------~~~~~---------------------~~~n~~~~~~   75 (369)
T 3st7_A           35 --T-KEEELESALL-------KADFIVHLAGVNRPE--------HDKEF---------------------SLGNVSYLDH   75 (369)
T ss_dssp             --C-CHHHHHHHHH-------HCSEEEECCCSBCTT--------CSTTC---------------------SSSCCBHHHH
T ss_pred             --C-CHHHHHHHhc-------cCCEEEECCcCCCCC--------CHHHH---------------------HHHHHHHHHH
Confidence              2 6677777765       489999999976421        11112                     8899999999


Q ss_pred             HHHHHHHHHHhCCCC-eEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         259 MTKALVEGMKQRGRG-CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       259 l~~~~lp~m~~~~~g-~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +++++.    +.+.. +||++||.....    ...|+.||.+.+.+++.++.+   .|++++.+.||.+.++..
T Consensus        76 l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~---~g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A           76 VLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKLQGEQLLREYAEE---YGNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             HHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTC
T ss_pred             HHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHH---hCCCEEEEECCceeCCCC
Confidence            888763    33333 899999987654    678999999999999998887   478999999999998843

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.50  E-value=7.1e-14  Score=148.93  Aligned_cols=154  Identities=12%  Similarity=0.078  Sum_probs=111.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++||||||+|+||.++++.|+++|++|++++|+..+.                                   .   .+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------------------------~---~v~  188 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------------------------G---KRF  188 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------------------------T---CEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------------------------c---cee
Confidence            67999999999999999999999999999999986431                                   0   156


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|+. +.  +       .+.+.++|+|||+||.....   ..+.+..+.+                     +++|+.|+.
T Consensus       189 ~d~~-~~--~-------~~~l~~~D~Vih~A~~~~~~---~~~~~~~~~~---------------------~~~Nv~gt~  234 (516)
T 3oh8_A          189 WDPL-NP--A-------SDLLDGADVLVHLAGEPIFG---RFNDSHKEAI---------------------RESRVLPTK  234 (516)
T ss_dssp             CCTT-SC--C-------TTTTTTCSEEEECCCC--------CCGGGHHHH---------------------HHHTHHHHH
T ss_pred             eccc-ch--h-------HHhcCCCCEEEECCCCcccc---ccchhHHHHH---------------------HHHHHHHHH
Confidence            7776 42  1       22335899999999975432   2333444444                     899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccc-c----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANL-G----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++++++.   .+.+.++||++||...+- .          .++...|+.+|...+.+..    ++...|+++++|.||.|
T Consensus       235 ~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v  307 (516)
T 3oh8_A          235 FLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATA----PASDAGKRVAFIRTGVA  307 (516)
T ss_dssp             HHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH----HHHHTTCEEEEEEECEE
T ss_pred             HHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH----HHHhCCCCEEEEEeeEE
Confidence            9999743   344557899999976543 0          1134578888887665533    34567999999999999


Q ss_pred             CCCC
Q psy3252         327 DTPG  330 (475)
Q Consensus       327 ~T~~  330 (475)
                      .++.
T Consensus       308 ~Gp~  311 (516)
T 3oh8_A          308 LSGR  311 (516)
T ss_dssp             EBTT
T ss_pred             ECCC
Confidence            9984

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.49  E-value=1.3e-13  Score=136.31  Aligned_cols=149  Identities=14%  Similarity=0.166  Sum_probs=103.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-----hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-----KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-----~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++|+||||+|+||.+++++|+++|++|++++|+.     ++.+.+ ..+..                          ..
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~--------------------------~~   56 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFKQ--------------------------LG   56 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHHT--------------------------TT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHHh--------------------------CC
Confidence            35799999999999999999999999999999984     333222 22221                          34


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.+++.++++       .+|+||||||.....                                    .|
T Consensus        57 ~~~~~~D~~-d~~~l~~~~~-------~~d~vi~~a~~~~~~------------------------------------~~   92 (313)
T 1qyd_A           57 AKLIEASLD-DHQRLVDALK-------QVDVVISALAGGVLS------------------------------------HH   92 (313)
T ss_dssp             CEEECCCSS-CHHHHHHHHT-------TCSEEEECCCCSSSS------------------------------------TT
T ss_pred             eEEEeCCCC-CHHHHHHHHh-------CCCEEEECCccccch------------------------------------hh
Confidence            678899999 9888877764       699999999965321                                    13


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CCeEEEecccccccc------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRG-RGCIVITASQAANLG------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      +.++.+++++    +.+.+ .++||+ |+......      .|....| .+|.+++.+.+       ..|++++.|.||.
T Consensus        93 ~~~~~~l~~a----a~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~  159 (313)
T 1qyd_A           93 ILEQLKLVEA----IKEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIE-------AASIPYTYVSSNM  159 (313)
T ss_dssp             TTTHHHHHHH----HHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHH-------HTTCCBCEEECCE
T ss_pred             HHHHHHHHHH----HHhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHH-------hcCCCeEEEEece
Confidence            3334444444    34555 568875 43321111      2345678 99999888764       3589999999998


Q ss_pred             CCCCC
Q psy3252         326 TDTPG  330 (475)
Q Consensus       326 v~T~~  330 (475)
                      +.+++
T Consensus       160 ~~~~~  164 (313)
T 1qyd_A          160 FAGYF  164 (313)
T ss_dssp             EHHHH
T ss_pred             ecccc
Confidence            87643

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.46  E-value=1.8e-13  Score=135.99  Aligned_cols=143  Identities=15%  Similarity=0.145  Sum_probs=99.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh------hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE------KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +++++||||+|+||.+++++|+++|++|++++|+.      ++.+. ...+..                          .
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-l~~~~~--------------------------~   56 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQL-REEFRS--------------------------M   56 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHH-HHHHHH--------------------------T
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHH-HHHhhc--------------------------C
Confidence            35799999999999999999999999999999986      22222 222222                          3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .+.++.+|++ |.+++.++++       .+|+||||||...              .                        
T Consensus        57 ~v~~v~~D~~-d~~~l~~a~~-------~~d~vi~~a~~~~--------------~------------------------   90 (321)
T 3c1o_A           57 GVTIIEGEME-EHEKMVSVLK-------QVDIVISALPFPM--------------I------------------------   90 (321)
T ss_dssp             TCEEEECCTT-CHHHHHHHHT-------TCSEEEECCCGGG--------------S------------------------
T ss_pred             CcEEEEecCC-CHHHHHHHHc-------CCCEEEECCCccc--------------h------------------------
Confidence            4678999999 9888887765       5999999998532              0                        


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CCeEEEeccccccc-c--C---CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRG-RGCIVITASQAANL-G--I---YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~-~--~---~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                        .+.    +.+++.+.+.+ .++||  .|..+.. .  .   |....| .+|++++.+.+.       .|++++.|.||
T Consensus        91 --~~~----~~l~~aa~~~g~v~~~v--~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~  154 (321)
T 3c1o_A           91 --SSQ----IHIINAIKAAGNIKRFL--PSDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA-------AALPYTYVSAN  154 (321)
T ss_dssp             --GGG----HHHHHHHHHHCCCCEEE--CSCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECC
T ss_pred             --hhH----HHHHHHHHHhCCccEEe--ccccccCccccccCCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEec
Confidence              011    22333334444 56787  3433321 0  1   124579 999999888753       47899999999


Q ss_pred             CCCCC
Q psy3252         325 DTDTP  329 (475)
Q Consensus       325 ~v~T~  329 (475)
                      .+.++
T Consensus       155 ~~~~~  159 (321)
T 3c1o_A          155 CFGAY  159 (321)
T ss_dssp             EEHHH
T ss_pred             eeccc
Confidence            88765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.42  E-value=1.8e-13  Score=135.86  Aligned_cols=223  Identities=10%  Similarity=0.030  Sum_probs=130.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++++||||+|+||.+++++|+++|++|++++|+.+...+...++..                          ..++++.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--------------------------~~v~~v~~   65 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--------------------------LGAIIVKG   65 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--------------------------TTCEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--------------------------CCCEEEEe
Confidence            5799999999999999999999999999999987522222222322                          23678999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+++.++++       .+|+||||||...              .                          .+.  
T Consensus        66 Dl~-d~~~l~~a~~-------~~d~vi~~a~~~~--------------~--------------------------~~~--   95 (318)
T 2r6j_A           66 ELD-EHEKLVELMK-------KVDVVISALAFPQ--------------I--------------------------LDQ--   95 (318)
T ss_dssp             CTT-CHHHHHHHHT-------TCSEEEECCCGGG--------------S--------------------------TTH--
T ss_pred             cCC-CHHHHHHHHc-------CCCEEEECCchhh--------------h--------------------------HHH--
Confidence            999 9888887765       5999999998531              0                          011  


Q ss_pred             HHHHHHHHHHhCC-CCeEEEecccccccc--C---CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         259 MTKALVEGMKQRG-RGCIVITASQAANLG--I---YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       259 l~~~~lp~m~~~~-~g~IV~iSS~a~~~~--~---~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                        +.+++.+++.+ .++||+ |+......  .   |....| .+|.+++.+.+.       .|++++.|.||.+.+.+..
T Consensus        96 --~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~  164 (318)
T 2r6j_A           96 --FKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFIN  164 (318)
T ss_dssp             --HHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHH
T ss_pred             --HHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhh
Confidence              22333334444 567774 43221111  1   123468 999998877653       5899999999987654221


Q ss_pred             ccccC--Cccccccc---cccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHH
Q psy3252         333 NEEKS--KPRETSLI---SQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQL  407 (475)
Q Consensus       333 ~~~~~--~~~~~~~~---~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i  407 (475)
                      .....  ........   ........++|++++.+.++...  ... ++           ...+.+....++..++++.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~--~~~-~~-----------~~~~~g~~~~~s~~e~~~~~  230 (318)
T 2r6j_A          165 YLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDP--RAL-NR-----------VVIYRPSTNIITQLELISRW  230 (318)
T ss_dssp             HHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCG--GGT-TE-----------EEECCCGGGEEEHHHHHHHH
T ss_pred             hhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCc--ccc-Ce-----------EEEecCCCCccCHHHHHHHH
Confidence            11100  00000000   01122456788887765544321  000 00           01111111246778888888


Q ss_pred             HHHHhcCCeeEEeCc
Q psy3252         408 LEDALKGNYFSTVGL  422 (475)
Q Consensus       408 ~~ai~~g~~~~~~~~  422 (475)
                      .+...+.-....++.
T Consensus       231 ~~~~g~~~~~~~~~~  245 (318)
T 2r6j_A          231 EKKIGKKFKKIHVPE  245 (318)
T ss_dssp             HHHHTCCCEEEEECH
T ss_pred             HHHhCCCCceeecCH
Confidence            777765544444443

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.42  E-value=2.9e-13  Score=133.40  Aligned_cols=223  Identities=13%  Similarity=0.094  Sum_probs=131.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh------HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK------KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~------~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .++|+||||+|+||.+++++|+++|++|++++|+..      +.+. ...+..                          .
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~-~~~l~~--------------------------~   56 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQL-LESFKA--------------------------S   56 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHH-HHHHHT--------------------------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHH-HHHHHh--------------------------C
Confidence            467999999999999999999999999999999843      2211 122221                          3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      .+.++.+|++ |.+++.++++       .+|+||||||...              .                     .  
T Consensus        57 ~v~~v~~D~~-d~~~l~~~~~-------~~d~vi~~a~~~~--------------~---------------------~--   91 (308)
T 1qyc_A           57 GANIVHGSID-DHASLVEAVK-------NVDVVISTVGSLQ--------------I---------------------E--   91 (308)
T ss_dssp             TCEEECCCTT-CHHHHHHHHH-------TCSEEEECCCGGG--------------S---------------------G--
T ss_pred             CCEEEEeccC-CHHHHHHHHc-------CCCEEEECCcchh--------------h---------------------h--
Confidence            4678899999 9888887765       5899999998531              0                     0  


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CCeEEEecccccccc-----CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRG-RGCIVITASQAANLG-----IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~-----~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                         +..+++    +.+++.+ .++||+ |+......     .|....| .+|.+++.+.+.       .|++++.+.||.
T Consensus        92 ---~~~~l~----~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~  155 (308)
T 1qyc_A           92 ---SQVNII----KAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNC  155 (308)
T ss_dssp             ---GGHHHH----HHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCE
T ss_pred             ---hHHHHH----HHHHhcCCCceEee-cccccCccccccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEece
Confidence               112233    3334444 567873 44321211     1223578 999998887653       478999999998


Q ss_pred             CCCCCCcccccC---Ccccccc--c---cccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCC
Q psy3252         326 TDTPGFENEEKS---KPRETSL--I---SQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGL  397 (475)
Q Consensus       326 v~T~~~~~~~~~---~~~~~~~--~---~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  397 (475)
                      +.+++.......   .......  .   .....+..++|++++.+.++...  ... ++           ...+.+....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~--~~~-~~-----------~~~~~g~~~~  221 (308)
T 1qyc_A          156 FAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP--RTL-NK-----------TLYLRLPANT  221 (308)
T ss_dssp             EHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG--GGT-TE-----------EEECCCGGGE
T ss_pred             eccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCc--ccc-Ce-----------EEEEeCCCCc
Confidence            866432211110   0000000  0   01122456788888766544321  000 00           1111111224


Q ss_pred             CChHHHHHHHHHHHhcCCeeEEeCc
Q psy3252         398 YRPEVVAKQLLEDALKGNYFSTVGL  422 (475)
Q Consensus       398 ~~~e~vA~~i~~ai~~g~~~~~~~~  422 (475)
                      ++..++++.+.+.+.+.-....++.
T Consensus       222 ~s~~e~~~~~~~~~g~~~~~~~~~~  246 (308)
T 1qyc_A          222 LSLNELVALWEKKIDKTLEKAYVPE  246 (308)
T ss_dssp             EEHHHHHHHHHHHTTSCCEEEEECH
T ss_pred             cCHHHHHHHHHHHhCCCCceEeCCH
Confidence            6788888888777765544444443

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.38  E-value=9.8e-13  Score=132.59  Aligned_cols=160  Identities=17%  Similarity=0.049  Sum_probs=111.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-----CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRG-----AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~G-----a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      +++||||||+|+||.+++++|+++|     ++|++++|+.....     +  .                        ..+
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~--~------------------------~~~   49 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H--E------------------------DNP   49 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C--C------------------------SSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c--c------------------------cCc
Confidence            4689999999999999999999999     99999999864321     0  0                        035


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.+++.++++.    ++++|++||+||...      .   +.+..                     +++|
T Consensus        50 ~~~~~~Dl~-d~~~~~~~~~~----~~~~d~vih~a~~~~------~---~~~~~---------------------~~~n   94 (364)
T 2v6g_A           50 INYVQCDIS-DPDDSQAKLSP----LTDVTHVFYVTWANR------S---TEQEN---------------------CEAN   94 (364)
T ss_dssp             CEEEECCTT-SHHHHHHHHTT----CTTCCEEEECCCCCC------S---SHHHH---------------------HHHH
T ss_pred             eEEEEeecC-CHHHHHHHHhc----CCCCCEEEECCCCCc------c---hHHHH---------------------HHHh
Confidence            778999999 98887776642    234999999999652      1   12333                     8999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEE-------EeccccccccC--------------CCChhhHHHHHHHHHHHHHHHHHH
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIV-------ITASQAANLGI--------------YGLAAYTSSKFALKGFAEALYMEV  311 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV-------~iSS~a~~~~~--------------~~~~~Y~aSKaAl~~l~~sLa~El  311 (475)
                      +.++.++++++.+...  +..++|       ++||...+-..              +....|.    +.+.+++.++   
T Consensus        95 ~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~---  165 (364)
T 2v6g_A           95 SKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEV---  165 (364)
T ss_dssp             HHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhH----HHHHHHHHHh---
Confidence            9999999998865311  234676       68887543211              1233563    2333333322   


Q ss_pred             ccCC-cEEEEEeCCCCCCCCCc
Q psy3252         312 KQSG-LTITLCLPPDTDTPGFE  332 (475)
Q Consensus       312 ~~~g-IrVn~V~PG~v~T~~~~  332 (475)
                      ..+| ++++++.|+.|.+|...
T Consensus       166 ~~~~~~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          166 EKKEGLTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             TTSTTCEEEEEEESSEECCCTT
T ss_pred             hcCCCceEEEECCCceeCCCCC
Confidence            2356 99999999999998543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.28  E-value=1.3e-12  Score=128.70  Aligned_cols=85  Identities=16%  Similarity=0.206  Sum_probs=71.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||+++||||+||||+++++.|+++|++|++++|+.++++++.+++....                         .+
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~-------------------------~~  169 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-------------------------KV  169 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-------------------------TC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC-------------------------Cc
Confidence            45789999999999999999999999999999999999998888887775421                         23


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      .++.+|++ +.+++.++++       .+|+||||||+.
T Consensus       170 ~~~~~D~~-~~~~~~~~~~-------~~DvlVn~ag~g  199 (287)
T 1lu9_A          170 NVTAAETA-DDASRAEAVK-------GAHFVFTAGAIG  199 (287)
T ss_dssp             CCEEEECC-SHHHHHHHTT-------TCSEEEECCCTT
T ss_pred             EEEEecCC-CHHHHHHHHH-------hCCEEEECCCcc
Confidence            45789999 8887776654       489999999864

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.23  E-value=4.5e-11  Score=117.50  Aligned_cols=152  Identities=16%  Similarity=0.104  Sum_probs=98.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +||||||||.||.+++++|.++|++|+++.|+...                                    ..   +..|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------------------------------~~---~~~~   42 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------------------------------GR---ITWD   42 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------------------------------TE---EEHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------------------------------Ce---eecc
Confidence            58999999999999999999999999999997431                                    11   1111


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      .. +           .+....+|.+||.||..........+....+..                     +++|+.++-++
T Consensus        43 ~~-~-----------~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~---------------------~~~~v~~t~~l   89 (298)
T 4b4o_A           43 EL-A-----------ASGLPSCDAAVNLAGENILNPLRRWNETFQKEV---------------------LGSRLETTQLL   89 (298)
T ss_dssp             HH-H-----------HHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHH---------------------HHHHHHHHHHH
T ss_pred             hh-h-----------HhhccCCCEEEEeccCcccchhhhhhhhhhhhh---------------------hhHHHHHHHHH
Confidence            11 0           123457999999998654444444455554544                     88899888877


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      .+++...  ..+...+|+.||...+-..           .....|+.+|...+.     +......++++..+.||.|.+
T Consensus        90 ~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g  162 (298)
T 4b4o_A           90 AKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLG  162 (298)
T ss_dssp             HHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEEC
T ss_pred             HHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEc
Confidence            7765322  1223456777776544221           122345555443332     123456799999999999998


Q ss_pred             CC
Q psy3252         329 PG  330 (475)
Q Consensus       329 ~~  330 (475)
                      |.
T Consensus       163 ~~  164 (298)
T 4b4o_A          163 RG  164 (298)
T ss_dssp             TT
T ss_pred             CC
Confidence            83

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.18  E-value=8e-13  Score=125.31  Aligned_cols=83  Identities=24%  Similarity=0.333  Sum_probs=63.9

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHH
Q psy3252          95 APTNGTLSVTGG----------------SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYE  158 (475)
Q Consensus        95 ~l~gk~vLITGa----------------s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~  158 (475)
                      ++.||+||||||                |||||+++|++|+++|++|++++++.. ++         .+           
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~-----------   63 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TP-----------   63 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CC-----------
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cC-----------
Confidence            468999999999                699999999999999999999988642 10         00           


Q ss_pred             HhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCc
Q psy3252         159 EIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL  216 (475)
Q Consensus       159 ~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~  216 (475)
                                  ..+  -.+|++ +.   .++++.+.+.++++|+||||||+....+.
T Consensus        64 ------------~g~--~~~dv~-~~---~~~~~~v~~~~~~~Dili~~Aav~d~~p~  103 (226)
T 1u7z_A           64 ------------PFV--KRVDVM-TA---LEMEAAVNASVQQQNIFIGCAAVADYRAA  103 (226)
T ss_dssp             ------------TTE--EEEECC-SH---HHHHHHHHHHGGGCSEEEECCBCCSEEES
T ss_pred             ------------CCC--eEEccC-cH---HHHHHHHHHhcCCCCEEEECCcccCCCCc
Confidence                        111  256888 64   45667778889999999999998755444

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.96  E-value=5.4e-10  Score=112.03  Aligned_cols=163  Identities=12%  Similarity=0.100  Sum_probs=107.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      +++||||+|.||.+++..|+++|.       .|++++++.  ++++....++....                        
T Consensus         6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~------------------------   61 (327)
T 1y7t_A            6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA------------------------   61 (327)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT------------------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc------------------------
Confidence            699999999999999999999996       799999874  33333233332210                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                        +.++ .|+. +.+++.+++       ...|++||.||.....   ..+.++   .                     ++
T Consensus        62 --~~~~-~di~-~~~~~~~a~-------~~~D~Vih~Ag~~~~~---~~~~~~---~---------------------~~  103 (327)
T 1y7t_A           62 --FPLL-AGLE-ATDDPKVAF-------KDADYALLVGAAPRKA---GMERRD---L---------------------LQ  103 (327)
T ss_dssp             --CTTE-EEEE-EESCHHHHT-------TTCSEEEECCCCCCCT---TCCHHH---H---------------------HH
T ss_pred             --cccc-CCeE-eccChHHHh-------CCCCEEEECCCcCCCC---CCCHHH---H---------------------HH
Confidence              0112 4555 433333332       3689999999976421   123222   2                     88


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEecccccc--------c-cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAAN--------L-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~--------~-~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      +|+.++..+++++...-  ...+++|++|+....        . +.+....|+.||...+.+...++..+   |+++..|
T Consensus       104 ~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~v  178 (327)
T 1y7t_A          104 VNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRI  178 (327)
T ss_dssp             HHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGE
T ss_pred             HHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHh---CcChhhe
Confidence            99999999988876531  123578888875421        1 23445679999999999888888764   5666677


Q ss_pred             eCCCCCCC
Q psy3252         322 LPPDTDTP  329 (475)
Q Consensus       322 ~PG~v~T~  329 (475)
                      .|.+|.+|
T Consensus       179 r~~~V~G~  186 (327)
T 1y7t_A          179 RRMTVWGN  186 (327)
T ss_dssp             ECCEEEBC
T ss_pred             eeeEEEcC
Confidence            77766665

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.81  E-value=1.8e-09  Score=102.46  Aligned_cols=93  Identities=13%  Similarity=0.179  Sum_probs=67.6

Q ss_pred             CCCEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHh
Q psy3252          97 TNGTLSVTGG----------------SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI  160 (475)
Q Consensus        97 ~gk~vLITGa----------------s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  160 (475)
                      +||+||||||                ||++|.++|++|+++|++|++++|+... ..       ..+             
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~~-------------   60 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EPH-------------   60 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CCC-------------
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cCC-------------
Confidence            5899999999                7889999999999999999999997531 00       000             


Q ss_pred             hhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHH
Q psy3252         161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKV  226 (475)
Q Consensus       161 ~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~  226 (475)
                                ..+  ...|+.    ++.++++.+.+.++.+|++|+|||+....+....+.+++..
T Consensus        61 ----------~~~--~~~~v~----s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~~~  110 (232)
T 2gk4_A           61 ----------PNL--SIREIT----NTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEVQA  110 (232)
T ss_dssp             ----------TTE--EEEECC----SHHHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHHHH
T ss_pred             ----------CCe--EEEEHh----HHHHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhhhc
Confidence                      112  233554    46667777778889999999999998766665555555543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.66  E-value=6.8e-08  Score=80.71  Aligned_cols=74  Identities=19%  Similarity=0.204  Sum_probs=60.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +++++|+|+ |+||.++++.|.+.| ++|++++|+.++++.+.    .                          ..+.++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--------------------------~~~~~~   53 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--------------------------MGVATK   53 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--------------------------TTCEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--------------------------CCCcEE
Confidence            568999999 999999999999999 89999999988776543    1                          234568


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .+|++ +.+++.++++       .+|++|+++|.
T Consensus        54 ~~d~~-~~~~~~~~~~-------~~d~vi~~~~~   79 (118)
T 3ic5_A           54 QVDAK-DEAGLAKALG-------GFDAVISAAPF   79 (118)
T ss_dssp             ECCTT-CHHHHHHHTT-------TCSEEEECSCG
T ss_pred             EecCC-CHHHHHHHHc-------CCCEEEECCCc
Confidence            89999 8777666543       79999999963

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.64  E-value=4.5e-11  Score=124.83  Aligned_cols=46  Identities=26%  Similarity=0.248  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      +.+.||+++|||++ |||+++|+.|+..|++|++++++..+++++..
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            46899999999987 99999999999999999999999877665543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.56  E-value=3e-07  Score=94.74  Aligned_cols=83  Identities=20%  Similarity=0.247  Sum_probs=70.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC---CEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRG---AHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~G---a~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++|+|+|| ||||.++++.|+++|   .+|++++|+.++++++.+++...++                       .++..
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~-----------------------~~~~~   57 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY-----------------------GEIDI   57 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC-----------------------CCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC-----------------------CceEE
Confidence            47899999 899999999999998   4999999999999998888765431                       34678


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      +.+|++ |.+++++++++.     ++|+||||+|..
T Consensus        58 ~~~D~~-d~~~l~~~l~~~-----~~DvVin~ag~~   87 (405)
T 4ina_A           58 TTVDAD-SIEELVALINEV-----KPQIVLNIALPY   87 (405)
T ss_dssp             EECCTT-CHHHHHHHHHHH-----CCSEEEECSCGG
T ss_pred             EEecCC-CHHHHHHHHHhh-----CCCEEEECCCcc
Confidence            899999 999999988865     699999999854

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.55  E-value=3.4e-08  Score=88.35  Aligned_cols=79  Identities=14%  Similarity=0.109  Sum_probs=63.5

Q ss_pred             ChHHHHHHHHHHHcCCEEEEEecChhHHH---HHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeecCCCH
Q psy3252         108 SGIGKHVAIEAAKRGAHVTIVARDEKKLL---QAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDY  184 (475)
Q Consensus       108 ~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~  184 (475)
                      +-++.++++.|++.|++|++..|+.....   ++.+.+.+.+                        .++..+++|++ +.
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G------------------------~~~~~i~~Dv~-~~   80 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG------------------------MDYVYIPVDWQ-NP   80 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT------------------------CEEEECCCCTT-SC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC------------------------CeEEEecCCCC-CC
Confidence            34779999999999999999988765432   2344444433                        56788899999 88


Q ss_pred             --HHHHHHHHHHHHhcCCccEEEEcccccc
Q psy3252         185 --ENIRSALQPAMDRCGPVYMLVNCAGMAL  212 (475)
Q Consensus       185 --~~v~~~~~~i~~~~g~IDvLVnnAG~~~  212 (475)
                        ++++++++.+.+.+|+ |+||||||+..
T Consensus        81 ~~~~v~~~~~~i~~~~G~-dVLVnnAgg~r  109 (157)
T 3gxh_A           81 KVEDVEAFFAAMDQHKGK-DVLVHCLANYR  109 (157)
T ss_dssp             CHHHHHHHHHHHHHTTTS-CEEEECSBSHH
T ss_pred             CHHHHHHHHHHHHhcCCC-CEEEECCCCCC
Confidence              9999999999999999 99999999753

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.42  E-value=3e-07  Score=91.85  Aligned_cols=79  Identities=18%  Similarity=0.201  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|+++|||||+||||+++++.+...|++|++++++.++++.+ +++   +                        ..   .
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g------------------------~~---~  193 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---G------------------------FD---A  193 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---T------------------------CS---E
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---C------------------------Cc---E
Confidence            589999999999999999999999999999999998877655 322   1                        11   2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .+|.+ +.+++.+.+.++..  +++|++|+|+|
T Consensus       194 ~~d~~-~~~~~~~~~~~~~~--~~~d~vi~~~g  223 (333)
T 1v3u_A          194 AFNYK-TVNSLEEALKKASP--DGYDCYFDNVG  223 (333)
T ss_dssp             EEETT-SCSCHHHHHHHHCT--TCEEEEEESSC
T ss_pred             EEecC-CHHHHHHHHHHHhC--CCCeEEEECCC
Confidence            35887 53445555554433  58999999998

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.42  E-value=9.6e-08  Score=93.85  Aligned_cols=82  Identities=18%  Similarity=0.192  Sum_probs=63.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +++++|+++|||++ |+|+++|+.|++.| +|++++|+.++++++.+++...+..                       . 
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~-----------------------~-  177 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK-----------------------K-  177 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC-----------------------C-
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc-----------------------c-
Confidence            56889999999997 99999999999999 9999999999888888777542110                       0 


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL  212 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~  212 (475)
                      ..+.+|++ +.          .+.++++|+||||+|...
T Consensus       178 ~~~~~d~~-~~----------~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          178 FGEEVKFS-GL----------DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             HHHHEEEE-CT----------TCCCTTCCEEEECSCTTC
T ss_pred             cceeEEEe-eH----------HHhhCCCCEEEECCCCCC
Confidence            01235666 41          344678999999999764

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.41  E-value=6.1e-07  Score=82.55  Aligned_cols=79  Identities=14%  Similarity=0.057  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++++||||+||||+++++.+...|++|++++|++++++.+.    +.+                        ..   .
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g------------------------~~---~   86 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLG------------------------VE---Y   86 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTC------------------------CS---E
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcC------------------------CC---E
Confidence            4789999999999999999999999999999999987665432    111                        11   2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .+|.+ +.+..+.+.+...  .+++|++|+|+|
T Consensus        87 ~~d~~-~~~~~~~~~~~~~--~~~~D~vi~~~g  116 (198)
T 1pqw_A           87 VGDSR-SVDFADEILELTD--GYGVDVVLNSLA  116 (198)
T ss_dssp             EEETT-CSTHHHHHHHHTT--TCCEEEEEECCC
T ss_pred             EeeCC-cHHHHHHHHHHhC--CCCCeEEEECCc
Confidence            35887 6443333333221  136999999997

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.37  E-value=5.2e-07  Score=94.28  Aligned_cols=78  Identities=13%  Similarity=0.179  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++|+++||| +||||+++++.|++.|++|++++|+.++++++.+++                            ..+..+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----------------------------~~~~~~   52 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----------------------------QHSTPI   52 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----------------------------TTEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----------------------------CCceEE
Confidence            478999998 799999999999999999999999987665433211                            235678


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      .+|++ +.+++.++++       .+|+||||++..
T Consensus        53 ~~Dv~-d~~~l~~~l~-------~~DvVIn~a~~~   79 (450)
T 1ff9_A           53 SLDVN-DDAALDAEVA-------KHDLVISLIPYT   79 (450)
T ss_dssp             ECCTT-CHHHHHHHHT-------TSSEEEECCC--
T ss_pred             EeecC-CHHHHHHHHc-------CCcEEEECCccc
Confidence            89999 8887776653       699999999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.36  E-value=8.1e-08  Score=102.29  Aligned_cols=47  Identities=34%  Similarity=0.489  Sum_probs=37.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      +++||+++|||| ||+|++++..|++.|++|++++|+.++++++.+++
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~  407 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI  407 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            467899999999 59999999999999999999999998888776554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.28  E-value=3.8e-06  Score=85.44  Aligned_cols=78  Identities=22%  Similarity=0.265  Sum_probs=60.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+.+++++|+|+ |+||+++++.+...|++|++++|+.++++.+.+.+   +                        ..  
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g------------------------~~--  212 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---G------------------------GR--  212 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---T------------------------TS--
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---C------------------------ce--
Confidence            467899999999 99999999999999999999999988776554322   1                        11  


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                       +.+|++ +.+++.+++.       ..|++|+|+|..
T Consensus       213 -~~~~~~-~~~~l~~~~~-------~~DvVi~~~g~~  240 (369)
T 2eez_A          213 -VITLTA-TEANIKKSVQ-------HADLLIGAVLVP  240 (369)
T ss_dssp             -EEEEEC-CHHHHHHHHH-------HCSEEEECCC--
T ss_pred             -EEEecC-CHHHHHHHHh-------CCCEEEECCCCC
Confidence             456888 7777666553       589999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.25  E-value=1.6e-06  Score=84.37  Aligned_cols=49  Identities=14%  Similarity=0.161  Sum_probs=43.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~  163 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA  163 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhh
Confidence            4678999999998 799999999999999999999999988887776653

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.23  E-value=8.2e-06  Score=81.09  Aligned_cols=85  Identities=20%  Similarity=0.325  Sum_probs=66.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC---hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCC
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD---EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPK  168 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
                      .++++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++++++....+                     
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~---------------------  206 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD---------------------  206 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS---------------------
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC---------------------
Confidence            35788999999997 7999999999999999 89999999   8888888888876532                     


Q ss_pred             ccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         169 FIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       169 ~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                          +.+...++. +.+++.+.+.       ..|+|||+....
T Consensus       207 ----~~~~~~~~~-~~~~l~~~l~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          207 ----CKAQLFDIE-DHEQLRKEIA-------ESVIFTNATGVG  237 (315)
T ss_dssp             ----CEEEEEETT-CHHHHHHHHH-------TCSEEEECSSTT
T ss_pred             ----CceEEeccc-hHHHHHhhhc-------CCCEEEECccCC
Confidence                123345676 6555544333       689999987654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.14  E-value=3.9e-06  Score=87.92  Aligned_cols=80  Identities=14%  Similarity=0.111  Sum_probs=61.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++++++|+|+|+ ||+|++++..|++. |++|++++|+.++++++.+.   .                          .
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--------------------------~   68 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--------------------------G   68 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--------------------------T
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--------------------------C
Confidence            4567889999997 99999999999998 67999999998877665432   0                          1


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      +..+.+|++ +.+++.++++       .+|+||||++..
T Consensus        69 ~~~~~~D~~-d~~~l~~~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           69 SKAISLDVT-DDSALDKVLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             CEEEECCTT-CHHHHHHHHH-------TSSEEEECSCGG
T ss_pred             CcEEEEecC-CHHHHHHHHc-------CCCEEEECCchh
Confidence            345678999 8877776654       699999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.14  E-value=3.5e-06  Score=84.59  Aligned_cols=80  Identities=19%  Similarity=0.153  Sum_probs=60.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|+++|||||+||||+++++.+...|++|++++|+.++++.+. +   .+                        ..   .
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~---~g------------------------~~---~  217 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S---IG------------------------GE---V  217 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H---TT------------------------CC---E
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H---cC------------------------Cc---e
Confidence            5899999999999999999999999999999999988765432 2   22                        11   2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .+|++ +.+++.+.+.++...  ++|++|+|+|.
T Consensus       218 ~~d~~-~~~~~~~~~~~~~~~--~~D~vi~~~g~  248 (347)
T 2hcy_A          218 FIDFT-KEKDIVGAVLKATDG--GAHGVINVSVS  248 (347)
T ss_dssp             EEETT-TCSCHHHHHHHHHTS--CEEEEEECSSC
T ss_pred             EEecC-ccHhHHHHHHHHhCC--CCCEEEECCCc
Confidence            35887 545566666655443  79999999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.14  E-value=3.3e-06  Score=83.95  Aligned_cols=79  Identities=11%  Similarity=0.093  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|+++|||||+||||+++++.+...|++|+++++++++++.+.+ +   +.                       .    .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~-----------------------~----~  188 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GA-----------------------W----Q  188 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TC-----------------------S----E
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CC-----------------------C----E
Confidence            58999999999999999999999999999999999887765543 2   21                       1    2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .+|.+ +.+.++.+.+...  ..++|++|+|+|
T Consensus       189 ~~~~~-~~~~~~~~~~~~~--~~~~D~vi~~~g  218 (327)
T 1qor_A          189 VINYR-EEDLVERLKEITG--GKKVRVVYDSVG  218 (327)
T ss_dssp             EEETT-TSCHHHHHHHHTT--TCCEEEEEECSC
T ss_pred             EEECC-CccHHHHHHHHhC--CCCceEEEECCc
Confidence            35777 5444444333221  136999999998

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.13  E-value=2e-06  Score=86.22  Aligned_cols=80  Identities=16%  Similarity=0.174  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|+++||+||+||||+++++.+...|++|+++++++++++.+.+++   +                        ..   .
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g------------------------~~---~  204 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---G------------------------FD---D  204 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---C------------------------CS---E
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C------------------------Cc---e
Confidence            5899999999999999999999999999999999988776554222   1                        11   2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .+|.+ +.+++.+.+.++..  +++|++|+|+|
T Consensus       205 ~~d~~-~~~~~~~~~~~~~~--~~~d~vi~~~g  234 (345)
T 2j3h_A          205 AFNYK-EESDLTAALKRCFP--NGIDIYFENVG  234 (345)
T ss_dssp             EEETT-SCSCSHHHHHHHCT--TCEEEEEESSC
T ss_pred             EEecC-CHHHHHHHHHHHhC--CCCcEEEECCC
Confidence            34776 43344444444432  57999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.13  E-value=4.5e-06  Score=83.24  Aligned_cols=80  Identities=15%  Similarity=0.136  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++++||||+||||+++++.+...|++|+++++++++++.+.+ +   +.                       .    .
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~-----------------------~----~  193 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GC-----------------------H----H  193 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TC-----------------------S----E
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CC-----------------------C----E
Confidence            58899999999999999999999999999999999877765532 2   21                       1    2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .+|.+ +.+..+.+.+.. . ..++|++|+|+|.
T Consensus       194 ~~d~~-~~~~~~~i~~~~-~-~~~~d~vi~~~g~  224 (333)
T 1wly_A          194 TINYS-TQDFAEVVREIT-G-GKGVDVVYDSIGK  224 (333)
T ss_dssp             EEETT-TSCHHHHHHHHH-T-TCCEEEEEECSCT
T ss_pred             EEECC-CHHHHHHHHHHh-C-CCCCeEEEECCcH
Confidence            35777 544333333322 1 1369999999984

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.12  E-value=2.3e-06  Score=73.73  Aligned_cols=78  Identities=17%  Similarity=0.145  Sum_probs=56.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++++++++|+|+ |++|..+++.|.+.|++|++++++++..+.+.    +                          ....
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~--------------------------~~~~   51 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S--------------------------YATH   51 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----T--------------------------TCSE
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H--------------------------hCCE
Confidence            345778999998 99999999999999999999999976554321    1                          1123


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .+.+|.+ +.+.+.++      ..+..|++|++++.
T Consensus        52 ~~~~d~~-~~~~l~~~------~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           52 AVIANAT-EENELLSL------GIRNFEYVIVAIGA   80 (144)
T ss_dssp             EEECCTT-CHHHHHTT------TGGGCSEEEECCCS
T ss_pred             EEEeCCC-CHHHHHhc------CCCCCCEEEECCCC
Confidence            5678998 76554432      13479999999874

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.10  E-value=9.9e-06  Score=70.18  Aligned_cols=75  Identities=19%  Similarity=0.145  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+++++|+|+ |.+|.++|+.|.++|++|++++++++..+.+.+                              ..+.++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~------------------------------~~~~~~   53 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED------------------------------EGFDAV   53 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------------------------------TTCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH------------------------------CCCcEE
Confidence            3568999998 779999999999999999999999887665543                              124567


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .+|.+ +.+.++++      .....|++|.+.+
T Consensus        54 ~gd~~-~~~~l~~~------~~~~~d~vi~~~~   79 (141)
T 3llv_A           54 IADPT-DESFYRSL------DLEGVSAVLITGS   79 (141)
T ss_dssp             ECCTT-CHHHHHHS------CCTTCSEEEECCS
T ss_pred             ECCCC-CHHHHHhC------CcccCCEEEEecC
Confidence            89999 87765543      2347899998776

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.07  E-value=5.4e-06  Score=82.73  Aligned_cols=80  Identities=16%  Similarity=0.178  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++|||+||+||||.++++.+...|++|+++++++++++.+.+++   +.                       .    .
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~-----------------------~----~  198 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GF-----------------------D----G  198 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CC-----------------------S----E
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC-----------------------C----E
Confidence            5899999999999999999999999999999999988877653332   11                       1    2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      ..|.+ +.+..+ .+.+..  .+++|++|+|+|.
T Consensus       199 ~~~~~-~~~~~~-~~~~~~--~~~~d~vi~~~g~  228 (336)
T 4b7c_A          199 AIDYK-NEDLAA-GLKREC--PKGIDVFFDNVGG  228 (336)
T ss_dssp             EEETT-TSCHHH-HHHHHC--TTCEEEEEESSCH
T ss_pred             EEECC-CHHHHH-HHHHhc--CCCceEEEECCCc
Confidence            35776 533333 233222  2479999999983

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.07  E-value=6.4e-06  Score=83.02  Aligned_cols=80  Identities=20%  Similarity=0.293  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++++||||+||||+++++.+...|++|+++++++++++.+ .++   +.                       .    .
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~-----------------------~----~  210 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GA-----------------------A----A  210 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TC-----------------------S----E
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CC-----------------------c----E
Confidence            588999999999999999999999999999999998877665 222   21                       1    2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .+|.+ +.+.++.+.+.. . .+++|++|+|+|.
T Consensus       211 ~~~~~-~~~~~~~~~~~~-~-~~~~d~vi~~~G~  241 (354)
T 2j8z_A          211 GFNYK-KEDFSEATLKFT-K-GAGVNLILDCIGG  241 (354)
T ss_dssp             EEETT-TSCHHHHHHHHT-T-TSCEEEEEESSCG
T ss_pred             EEecC-ChHHHHHHHHHh-c-CCCceEEEECCCc
Confidence            35776 544333332211 1 1369999999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.05  E-value=4.4e-06  Score=84.19  Aligned_cols=79  Identities=14%  Similarity=0.175  Sum_probs=57.5

Q ss_pred             CC--CEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          97 TN--GTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        97 ~g--k~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .|  +++|||||+||||+++++.+...|+ +|++++++.++++.+.+++   +                        .. 
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g------------------------~~-  209 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---G------------------------FD-  209 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---C------------------------CS-
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---C------------------------Cc-
Confidence            47  8999999999999999999999999 9999999987776554322   1                        11 


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                        ..+|.+ +.+ +.+.+.+...  +++|++|+|+|
T Consensus       210 --~~~d~~-~~~-~~~~~~~~~~--~~~d~vi~~~G  239 (357)
T 2zb4_A          210 --AAINYK-KDN-VAEQLRESCP--AGVDVYFDNVG  239 (357)
T ss_dssp             --EEEETT-TSC-HHHHHHHHCT--TCEEEEEESCC
T ss_pred             --eEEecC-chH-HHHHHHHhcC--CCCCEEEECCC
Confidence              246777 533 3333333222  27999999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.01  E-value=1e-05  Score=81.43  Aligned_cols=41  Identities=22%  Similarity=0.213  Sum_probs=37.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .|++++||||+||||+++++.+...|++|+++++++++++.
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~  210 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI  210 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Confidence            58899999999999999999999999999999999887763

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.94  E-value=1.8e-05  Score=79.37  Aligned_cols=42  Identities=29%  Similarity=0.306  Sum_probs=38.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|+++||||+++|||+++++.+... |++|+++++++++++.+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~  212 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA  212 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5889999999999999999999999 99999999998877655

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.89  E-value=8e-05  Score=73.84  Aligned_cols=53  Identities=15%  Similarity=0.262  Sum_probs=46.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC---hhHHHHHHHHHHHhC
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD---EKKLLQAQEEIKKAC  146 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~---~~~l~~~~~~l~~~~  146 (475)
                      ..+++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++++++....
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~  199 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT  199 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc
Confidence            35688999999997 8999999999999999 89999999   888888888887643

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.86  E-value=7.3e-05  Score=74.69  Aligned_cols=150  Identities=11%  Similarity=0.032  Sum_probs=95.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecC----hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCC
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARD----EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNP  167 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  167 (475)
                      .+|+||||+|.+|.+++..|+..|.       .|++++++    +++++....++.....                    
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~--------------------   65 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF--------------------   65 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC--------------------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc--------------------
Confidence            3799999999999999999999885       79999998    6666655555554210                    


Q ss_pred             CccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         168 KFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       168 ~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                         . +   ..|+. ...+..++       +...|++|+.||.....   ..+..+   +                    
T Consensus        66 ---~-~---~~~i~-~~~~~~~a-------l~~aD~Vi~~ag~~~~~---g~~r~d---l--------------------  104 (329)
T 1b8p_A           66 ---P-L---LAGMT-AHADPMTA-------FKDADVALLVGARPRGP---GMERKD---L--------------------  104 (329)
T ss_dssp             ---T-T---EEEEE-EESSHHHH-------TTTCSEEEECCCCCCCT---TCCHHH---H--------------------
T ss_pred             ---c-c---cCcEE-EecCcHHH-------hCCCCEEEEeCCCCCCC---CCCHHH---H--------------------
Confidence               0 0   11332 21222222       33789999999975321   122222   2                    


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccc--------cc-cCCCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAA--------NL-GIYGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~--------~~-~~~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                       +..|+.....+++.+..+-  ...+.||++|....        .. +.|..-.|+.++.--..+...++..+.
T Consensus       105 -~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          105 -LEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             -HHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             -HHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence             7889888888777765431  13468999987442        11 334444577777666667777777764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.85  E-value=5e-05  Score=74.29  Aligned_cols=52  Identities=17%  Similarity=0.295  Sum_probs=47.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKAC  146 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~  146 (475)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++++++...+
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~  175 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV  175 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc
Confidence            4688999999998 7999999999999999 79999999999999988887653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.84  E-value=4.3e-05  Score=76.83  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++|||+||+||||.++++.+...|++|+++++++++++.+.+ +   +.                       .    .
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga-----------------------~----~  215 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GA-----------------------K----R  215 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TC-----------------------S----E
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CC-----------------------C----E
Confidence            58899999999999999999999999999999999988765542 2   21                       1    2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .+|.. +.+..+. +.+..  .+++|++|+|+|.
T Consensus       216 ~~~~~-~~~~~~~-~~~~~--~~g~Dvvid~~g~  245 (353)
T 4dup_A          216 GINYR-SEDFAAV-IKAET--GQGVDIILDMIGA  245 (353)
T ss_dssp             EEETT-TSCHHHH-HHHHH--SSCEEEEEESCCG
T ss_pred             EEeCC-chHHHHH-HHHHh--CCCceEEEECCCH
Confidence            35666 4333333 33332  4579999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.84  E-value=7.3e-05  Score=72.58  Aligned_cols=49  Identities=16%  Similarity=0.216  Sum_probs=44.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~  163 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ  163 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc
Confidence            4678999999998 799999999999999999999999999888877664

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.75  E-value=0.00015  Score=73.89  Aligned_cols=45  Identities=27%  Similarity=0.254  Sum_probs=40.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      .+.|++++|+|+ |+||+++++.+...|++|++++|+.++++.+.+
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~  209 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDA  209 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            578999999998 999999999999999999999999887766543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.73  E-value=0.00026  Score=71.52  Aligned_cols=46  Identities=24%  Similarity=0.308  Sum_probs=40.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEE  141 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~  141 (475)
                      .+++++|+|+|+ ||+|+++++.+...|++|++++|+.++++.+.+.
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~  209 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETL  209 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh
Confidence            356789999999 9999999999999999999999999888776543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.72  E-value=6.8e-05  Score=74.97  Aligned_cols=43  Identities=28%  Similarity=0.263  Sum_probs=39.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|+++||+|++||||+++++.+...|++|+++++++++++.+.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~  208 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK  208 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5889999999999999999999999999999999988876553

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.72  E-value=4.8e-05  Score=75.79  Aligned_cols=42  Identities=24%  Similarity=0.301  Sum_probs=38.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|+++||+||+||||.++++.+...|++|+++++++++++.+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  189 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA  189 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999998877643

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.71  E-value=5.9e-05  Score=74.87  Aligned_cols=43  Identities=16%  Similarity=0.186  Sum_probs=39.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|+++||+||+||||+++++.+...|++|+++++++++++.+.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~  182 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK  182 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5889999999999999999999999999999999988876554

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.64  E-value=7e-05  Score=74.82  Aligned_cols=43  Identities=23%  Similarity=0.190  Sum_probs=38.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+||++|||..+++.+...|++|++++++.++++.+.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~  186 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL  186 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5889999999999999999999999999999999988876554

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.57  E-value=8.3e-05  Score=77.19  Aligned_cols=42  Identities=17%  Similarity=0.181  Sum_probs=38.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+||+||||.+.++.+...|++|+++++++++++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999998877654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.55  E-value=0.00062  Score=67.81  Aligned_cols=34  Identities=15%  Similarity=0.283  Sum_probs=31.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecChh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEK  133 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~  133 (475)
                      +++||||+|.+|..++..|+.+|  ..|++++++++
T Consensus        10 KI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A           10 KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             EEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            79999999999999999999999  68999998876

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.55  E-value=0.00012  Score=73.78  Aligned_cols=39  Identities=21%  Similarity=0.164  Sum_probs=35.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh---hHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE---KKLLQ  137 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~---~~l~~  137 (475)
                      |++|||+|+ ||||..+++.+...|++|++++++.   ++++.
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~  222 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV  222 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH
Confidence            999999999 9999999999999999999999987   66643

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.55  E-value=0.00011  Score=72.33  Aligned_cols=48  Identities=15%  Similarity=0.176  Sum_probs=42.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      .++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++++++
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~  185 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG  185 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            4678999999997 7999999999999998 9999999998887776544

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.53  E-value=0.00029  Score=70.44  Aligned_cols=43  Identities=26%  Similarity=0.254  Sum_probs=38.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+||+||||.++++.+...|++|++++++.++++.+.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~  201 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK  201 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5889999999999999999999999999999999988876543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.52  E-value=0.0003  Score=61.68  Aligned_cols=78  Identities=15%  Similarity=0.234  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .+++++|.|+ |.+|..+++.|.+.|++|++++++ ++..+.+.+...                           ..+.+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~---------------------------~~~~~   53 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---------------------------DNADV   53 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---------------------------TTCEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc---------------------------CCCeE
Confidence            3467889986 999999999999999999999997 455544433221                           23567


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      +..|.+ +.+.+.++      .....|.+|.+.+
T Consensus        54 i~gd~~-~~~~l~~a------~i~~ad~vi~~~~   80 (153)
T 1id1_A           54 IPGDSN-DSSVLKKA------GIDRCRAILALSD   80 (153)
T ss_dssp             EESCTT-SHHHHHHH------TTTTCSEEEECSS
T ss_pred             EEcCCC-CHHHHHHc------ChhhCCEEEEecC
Confidence            889999 87755443      1247899988765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.51  E-value=0.00035  Score=59.49  Aligned_cols=75  Identities=13%  Similarity=0.188  Sum_probs=54.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.+    ..                         .+.++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~~-------------------------~~~~~~   53 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI-------------------------DALVIN   53 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC-------------------------SSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----hc-------------------------CcEEEE
Confidence            347889987 999999999999999999999999876654432    11                         133567


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .|.+ +.+.+.+.      .....|++|.+.+
T Consensus        54 ~d~~-~~~~l~~~------~~~~~d~vi~~~~   78 (140)
T 1lss_A           54 GDCT-KIKTLEDA------GIEDADMYIAVTG   78 (140)
T ss_dssp             SCTT-SHHHHHHT------TTTTCSEEEECCS
T ss_pred             cCCC-CHHHHHHc------CcccCCEEEEeeC
Confidence            7888 76544321      1347899999875

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.50  E-value=0.00032  Score=70.25  Aligned_cols=42  Identities=17%  Similarity=0.251  Sum_probs=37.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      ++++||+||+||||...++.+...|++|++++++.++++.+.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  206 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK  206 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            389999999999999999999999999999999988876553

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.46  E-value=0.00029  Score=71.01  Aligned_cols=43  Identities=19%  Similarity=0.199  Sum_probs=38.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+||+||||..+++.+...|++|+++++++++++.+.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  205 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK  205 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            5889999999999999999999999999999999987776543

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.45  E-value=0.0005  Score=67.07  Aligned_cols=50  Identities=18%  Similarity=0.199  Sum_probs=45.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++..
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~  172 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA  172 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc
Confidence            5678999999997 7999999999999997 999999999999888887754

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.40  E-value=0.00046  Score=66.03  Aligned_cols=83  Identities=18%  Similarity=0.323  Sum_probs=63.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh-------------------hHHHHHHHHHHHhCCCCcchhh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE-------------------KKLLQAQEEIKKACPNPKFIRF  154 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~  154 (475)
                      .+++++|+|.|+ ||+|.++++.|+..|. +|++++++.                   .+.+.+++.+.+..+.      
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~------  100 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH------  100 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT------
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC------
Confidence            356789999995 7999999999999998 899999987                   7888888888876643      


Q ss_pred             hhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         155 IEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                                      .++..+..+++ + +.+.++++       ..|++|++..
T Consensus       101 ----------------~~v~~~~~~~~-~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          101 ----------------IAITPVNALLD-D-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             ----------------SEEEEECSCCC-H-HHHHHHHH-------TSSEEEECCS
T ss_pred             ----------------cEEEEEeccCC-H-hHHHHHHh-------CCCEEEEeCC
Confidence                            45666666665 3 33443332       6899998764

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.38  E-value=0.00051  Score=68.69  Aligned_cols=43  Identities=21%  Similarity=0.284  Sum_probs=38.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+||+|+||...++.+...|++|++++++.++++.+.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  192 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK  192 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5899999999999999999999999999999999988776554

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.38  E-value=0.00025  Score=73.91  Aligned_cols=87  Identities=15%  Similarity=0.174  Sum_probs=61.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++|||+||+|+||...++.+...|++|+++++++++++.+. ++   +..                      ..+.+-
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~l---Ga~----------------------~vi~~~  281 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AM---GAE----------------------AIIDRN  281 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCC----------------------EEEETT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hh---CCc----------------------EEEecC
Confidence            5789999999999999999999999999999999888776553 22   211                      000000


Q ss_pred             --------EeecCCCHHHHHHHHHHHHHhcC--CccEEEEcccc
Q psy3252         177 --------SLDISKDYENIRSALQPAMDRCG--PVYMLVNCAGM  210 (475)
Q Consensus       177 --------~~Dvt~d~~~v~~~~~~i~~~~g--~IDvLVnnAG~  210 (475)
                              .-+.+ +.++++.+.+.+.+..+  .+|++|+++|.
T Consensus       282 ~~d~~~~~~~~~~-~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          282 AEGYRFWKDENTQ-DPKEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             TTTCCSEEETTEE-CHHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             cCccccccccccc-chHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence                    00123 55666677777766543  79999999983

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.35  E-value=0.00044  Score=68.98  Aligned_cols=41  Identities=24%  Similarity=0.262  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ ||||..+++.+...|++|+++++++++++.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  204 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA  204 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            5889999999 8899999999999999999999998887654

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.31  E-value=0.0035  Score=61.91  Aligned_cols=150  Identities=14%  Similarity=0.065  Sum_probs=89.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEec--ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVAR--DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R--~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +++||||+|.+|.+++..|+..|.  .++++++  ++++++....++....+.                    ....+.+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~--------------------~~~~~~i   61 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAG--------------------TRSDANI   61 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTT--------------------SCCCCEE
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHh--------------------cCCCeEE
Confidence            589999999999999999999885  5889999  776665544445432110                    0011122


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      ...|   |  ++.+       .+...|++|+.||.....   ..+..   .+                     +++|+.+
T Consensus        62 ~~~~---d--~l~~-------al~gaD~Vi~~Ag~~~~~---g~~r~---dl---------------------~~~N~~i  102 (313)
T 1hye_A           62 YVES---D--ENLR-------IIDESDVVIITSGVPRKE---GMSRM---DL---------------------AKTNAKI  102 (313)
T ss_dssp             EEEE---T--TCGG-------GGTTCSEEEECCSCCCCT---TCCHH---HH---------------------HHHHHHH
T ss_pred             EeCC---c--chHH-------HhCCCCEEEECCCCCCCC---CCcHH---HH---------------------HHHHHHH
Confidence            2111   1  0111       134799999999975321   12222   12                     7899998


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEecccccc--------ccCCCChhhHH-HHHHHHHHHHHHHHHHc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAAN--------LGIYGLAAYTS-SKFALKGFAEALYMEVK  312 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~--------~~~~~~~~Y~a-SKaAl~~l~~sLa~El~  312 (475)
                      +..+++++..+    ..+.|+++|.....        .+.|..-.++. +..-...+...++..+.
T Consensus       103 ~~~i~~~i~~~----~~~~vlv~SNPv~~~t~~~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          103 VGKYAKKIAEI----CDTKIFVITNPVDVMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             HHHHHHHHHHH----CCCEEEECSSSHHHHHHHHHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHh----CCeEEEEecCcHHHHHHHHHHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            88888887654    23455555543321        12444445665 55445566666777664

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.30  E-value=0.0027  Score=62.41  Aligned_cols=45  Identities=20%  Similarity=0.305  Sum_probs=36.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEec--ChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVAR--DEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R--~~~~l~~~~~~l~~  144 (475)
                      +++||||+|.+|.+++..|+..|.  .++++++  ++++++....++..
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~   50 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH   50 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHH
Confidence            589999999999999999999886  6999999  87766655555544

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.28  E-value=0.00053  Score=68.50  Aligned_cols=41  Identities=27%  Similarity=0.345  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+||+|+||..+++.+...|++|+++ ++.++++.+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~  190 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV  190 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH
Confidence            58899999999999999999999999999999 777776543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.28  E-value=0.00052  Score=69.33  Aligned_cols=72  Identities=15%  Similarity=0.279  Sum_probs=56.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      .+|+|.|| |++|+.+|+.|++ .++|.+++++.++++++.+                               .+..+.+
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-------------------------------~~~~~~~   63 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-------------------------------FATPLKV   63 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-------------------------------TSEEEEC
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-------------------------------cCCcEEE
Confidence            36888998 9999999998865 5799999999887765421                               2345789


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      |++ |.+++.++++       ..|+|||+++..
T Consensus        64 d~~-d~~~l~~~~~-------~~DvVi~~~p~~   88 (365)
T 3abi_A           64 DAS-NFDKLVEVMK-------EFELVIGALPGF   88 (365)
T ss_dssp             CTT-CHHHHHHHHT-------TCSEEEECCCGG
T ss_pred             ecC-CHHHHHHHHh-------CCCEEEEecCCc
Confidence            999 9888777664       689999999754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.27  E-value=0.00015  Score=71.65  Aligned_cols=38  Identities=24%  Similarity=0.259  Sum_probs=32.8

Q ss_pred             CCCCCE-EEEecCCC-----------------h-HHHHHHHHHHHcCCEEEEEecCh
Q psy3252          95 APTNGT-LSVTGGSS-----------------G-IGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        95 ~l~gk~-vLITGas~-----------------G-IG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      ++.||+ ||||+|..                 | .|.++|+.++++|+.|+++.+..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            357887 99998865                 6 99999999999999999998853

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.27  E-value=0.0004  Score=67.96  Aligned_cols=42  Identities=19%  Similarity=0.204  Sum_probs=38.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++++|+||+||+|..+++.+...|++|+++++++++++.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999998877654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.23  E-value=0.00031  Score=61.83  Aligned_cols=41  Identities=20%  Similarity=0.297  Sum_probs=35.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      +..+++++|.|+ |.+|..+++.|.+.|++|++++|++++++
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~   56 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFH   56 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGG
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            345778999986 99999999999999999999999987654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.22  E-value=0.00047  Score=62.20  Aligned_cols=78  Identities=18%  Similarity=0.132  Sum_probs=56.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++.+++++|.| .|.+|..+|+.|.+. |++|+++++++++.+.+.+    .+                          +
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g--------------------------~   84 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG--------------------------R   84 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT--------------------------C
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC--------------------------C
Confidence            34566788888 599999999999999 9999999999887665432    21                          2


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      ..+.+|.+ +.+.+.++     ......|++|.+.+
T Consensus        85 ~~~~gd~~-~~~~l~~~-----~~~~~ad~vi~~~~  114 (183)
T 3c85_A           85 NVISGDAT-DPDFWERI-----LDTGHVKLVLLAMP  114 (183)
T ss_dssp             CEEECCTT-CHHHHHTB-----CSCCCCCEEEECCS
T ss_pred             CEEEcCCC-CHHHHHhc-----cCCCCCCEEEEeCC
Confidence            35677988 76544322     01346899998765

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.20  E-value=0.0016  Score=63.73  Aligned_cols=91  Identities=18%  Similarity=0.326  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh------------------hHHHHHHHHHHHhCCCCcchhh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE------------------KKLLQAQEEIKKACPNPKFIRF  154 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~------------------~~l~~~~~~l~~~~~~~~~~~~  154 (475)
                      -.+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .+.+.+++.+.+.++.      
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~------  104 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPD------  104 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTT------
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCC------
Confidence            4567889999985 7999999999999997 899999876                  5677777777776654      


Q ss_pred             hhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHh----cCCccEEEEcc
Q psy3252         155 IEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDR----CGPVYMLVNCA  208 (475)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~----~g~IDvLVnnA  208 (475)
                                      .+++.+..+++ +.+.+..+++.+...    ....|++|.+.
T Consensus       105 ----------------v~v~~~~~~l~-~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          105 ----------------VLFEVHNYNIT-TVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             ----------------SEEEEECCCTT-SHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ----------------cEEEEecccCC-cHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence                            56788888888 766676666544321    13689998665

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.19  E-value=0.0012  Score=57.12  Aligned_cols=73  Identities=10%  Similarity=0.059  Sum_probs=54.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++++|.|+ |.+|..+|+.|.+.|++|++++++++..+.+.+    .                          .+.++..
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--------------------------g~~~i~g   56 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--------------------------GVRAVLG   56 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--------------------------TCEEEES
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--------------------------CCCEEEC
Confidence            35778886 889999999999999999999999987765542    1                          2456789


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      |.+ +.+.++++      .....|++|.+.+
T Consensus        57 d~~-~~~~l~~a------~i~~ad~vi~~~~   80 (140)
T 3fwz_A           57 NAA-NEEIMQLA------HLECAKWLILTIP   80 (140)
T ss_dssp             CTT-SHHHHHHT------TGGGCSEEEECCS
T ss_pred             CCC-CHHHHHhc------CcccCCEEEEECC
Confidence            999 87655442      1236788887765

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.15  E-value=0.00077  Score=67.98  Aligned_cols=75  Identities=17%  Similarity=0.249  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|++|||+|+ |+||..+++.+...|++|+++++++++++.+.+++   +.                       .    .
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga-----------------------~----~  235 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GA-----------------------D----S  235 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CC-----------------------S----E
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CC-----------------------c----e
Confidence            6899999996 99999999999999999999999988776544322   11                       1    2


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      ..|.. +.+.+.+       ..+.+|++|+++|.
T Consensus       236 v~~~~-~~~~~~~-------~~~~~D~vid~~g~  261 (366)
T 1yqd_A          236 FLVSR-DQEQMQA-------AAGTLDGIIDTVSA  261 (366)
T ss_dssp             EEETT-CHHHHHH-------TTTCEEEEEECCSS
T ss_pred             EEecc-CHHHHHH-------hhCCCCEEEECCCc
Confidence            35776 6443322       23579999999985

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.08  E-value=0.00097  Score=64.70  Aligned_cols=49  Identities=20%  Similarity=0.284  Sum_probs=43.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++.
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            4678999999997 6999999999999996 99999999999888887664

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.05  E-value=0.0011  Score=67.05  Aligned_cols=40  Identities=25%  Similarity=0.292  Sum_probs=34.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .|++|+|+||+|+||..+++.+...|++|++++ +.++++.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~  222 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASEL  222 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHH
Confidence            588999999999999999999999999999888 4455543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.00  E-value=0.00057  Score=59.27  Aligned_cols=44  Identities=14%  Similarity=0.157  Sum_probs=39.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      +++++|.|+ |++|..+++.|.+.|++|++++|+.++.+++.+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            789999996 99999999999999999999999998887766554

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.85  E-value=0.0033  Score=60.16  Aligned_cols=83  Identities=16%  Similarity=0.332  Sum_probs=60.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh-------------------hHHHHHHHHHHHhCCCCcchhh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE-------------------KKLLQAQEEIKKACPNPKFIRF  154 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~  154 (475)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+++.+.+..+.      
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~------   97 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD------   97 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT------
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC------
Confidence            356789999997 7899999999999998 888987653                   6777888888876653      


Q ss_pred             hhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         155 IEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                                      .++..+..+++ + +.+.++++       ..|++|++..
T Consensus        98 ----------------~~v~~~~~~~~-~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1           98 ----------------IQLTALQQRLT-G-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ----------------SEEEEECSCCC-H-HHHHHHHH-------HCSEEEECCS
T ss_pred             ----------------CEEEEEeccCC-H-HHHHHHHh-------cCCEEEECCC
Confidence                            45666665665 3 44444433       4789887753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.82  E-value=0.0028  Score=63.67  Aligned_cols=41  Identities=24%  Similarity=0.321  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+| +|+||...++.+...|++|+++++++++++.+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  229 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA  229 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH
Confidence            578999999 89999999999999999999999998877654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.81  E-value=0.0033  Score=64.44  Aligned_cols=47  Identities=23%  Similarity=0.395  Sum_probs=41.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++.|++++|.|+ |+||..+++.|...|+ +|++++|+.++++++.+++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            468999999998 9999999999999999 9999999988876665543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.79  E-value=0.0019  Score=64.41  Aligned_cols=42  Identities=19%  Similarity=0.203  Sum_probs=37.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+|+ |+||..+++.+...|+ +|+++++++++++.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~  209 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK  209 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            7899999999 9999999999999999 9999999988766543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.76  E-value=0.0041  Score=62.34  Aligned_cols=38  Identities=21%  Similarity=0.224  Sum_probs=33.5

Q ss_pred             CC-CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH
Q psy3252          97 TN-GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK  134 (475)
Q Consensus        97 ~g-k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~  134 (475)
                      .| .+|||+||+|++|...++.+...|++|++++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            47 899999999999999998888899999998877655

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.73  E-value=0.0012  Score=65.18  Aligned_cols=39  Identities=26%  Similarity=0.279  Sum_probs=35.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +|||+||+||+|...++.+...|++|+++++++++++.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999999989999999999998777654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.73  E-value=0.003  Score=58.62  Aligned_cols=73  Identities=18%  Similarity=0.117  Sum_probs=56.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++|.|+ |.+|..+|+.|.+.|++|++++++++..+++.+.                             ..+.++..|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-----------------------------~~~~~i~gd   51 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-----------------------------LKATIIHGD   51 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-----------------------------SSSEEEESC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-----------------------------cCCeEEEcC
Confidence            4789996 8999999999999999999999999877665432                             124568899


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .+ +.+.++++      .....|++|.+.+
T Consensus        52 ~~-~~~~l~~a------~i~~ad~vi~~~~   74 (218)
T 3l4b_C           52 GS-HKEILRDA------EVSKNDVVVILTP   74 (218)
T ss_dssp             TT-SHHHHHHH------TCCTTCEEEECCS
T ss_pred             CC-CHHHHHhc------CcccCCEEEEecC
Confidence            99 87655543      2347899887664

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.70  E-value=0.0052  Score=61.56  Aligned_cols=83  Identities=19%  Similarity=0.208  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .|++|||+|+ |++|...++.+...|++ |+++++++++++.+.+ + .                          ..+..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~--------------------------~~~~~  229 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-C--------------------------PEVVT  229 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-C--------------------------TTCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-c--------------------------hhccc
Confidence            5889999998 99999999988889997 9999999888765543 3 1                          11223


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      +..|-. +.+++.+.+.+... -..+|++|.++|.
T Consensus       230 ~~~~~~-~~~~~~~~v~~~t~-g~g~Dvvid~~g~  262 (363)
T 3m6i_A          230 HKVERL-SAEESAKKIVESFG-GIEPAVALECTGV  262 (363)
T ss_dssp             EECCSC-CHHHHHHHHHHHTS-SCCCSEEEECSCC
T ss_pred             cccccc-chHHHHHHHHHHhC-CCCCCEEEECCCC
Confidence            344444 44444433333211 1369999999984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.70  E-value=0.0067  Score=62.08  Aligned_cols=42  Identities=19%  Similarity=0.070  Sum_probs=38.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +.+++|+|+|+ |.+|+.+++.+...|++|++++++.++++.+
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            56899999996 8999999999999999999999998877664

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.68  E-value=0.0073  Score=60.04  Aligned_cols=53  Identities=15%  Similarity=0.196  Sum_probs=42.8

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      +.++..++++.|+|+ |++|.++|..|+..|.  .|+++|+++++++....++...
T Consensus         3 ~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~   57 (326)
T 3vku_A            3 SITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDA   57 (326)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT
T ss_pred             ccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhh
Confidence            345666778999996 9999999999999987  8999999999888777777653

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.65  E-value=0.028  Score=55.80  Aligned_cols=47  Identities=11%  Similarity=0.291  Sum_probs=40.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      .+++.|+|+ |.+|.++|..|+..|.  .|+++++++++++..+.+|...
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~   53 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG   53 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc
Confidence            457889996 9999999999999997  8999999999888877777654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.64  E-value=0.0047  Score=61.67  Aligned_cols=41  Identities=32%  Similarity=0.350  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ |++|...++.+...|++|+++++++++++.+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  208 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA  208 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            5889999997 8999999998888999999999998877654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.63  E-value=0.015  Score=58.00  Aligned_cols=45  Identities=13%  Similarity=0.152  Sum_probs=37.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--E-----EEEEecCh--hHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--H-----VTIVARDE--KKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~-----Vvl~~R~~--~~l~~~~~~l~~  144 (475)
                      +|+||||+|.||.+++..|+..|.  .     |+++|+++  ++++..+.+|..
T Consensus         5 kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~   58 (333)
T 5mdh_A            5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD   58 (333)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh
Confidence            689999999999999999998875  4     99999974  466666666665

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.61  E-value=0.0019  Score=64.42  Aligned_cols=40  Identities=20%  Similarity=0.300  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQ  137 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~  137 (475)
                      .|++|||+|+ |++|..+++.+...|+ +|+++++++++++.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~  204 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAF  204 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            7899999999 9999999998888999 99999999877653

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.61  E-value=0.0058  Score=61.19  Aligned_cols=50  Identities=24%  Similarity=0.257  Sum_probs=42.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      +.+++|.|+|++|.+|..+|..++..|.  +|+++|.++++++..+.+|...
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~   57 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC   57 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC
Confidence            3466899999999999999999999994  7999999998888777777653

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.60  E-value=0.00031  Score=68.39  Aligned_cols=43  Identities=19%  Similarity=0.201  Sum_probs=38.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~  137 (475)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            4678999999997 7999999999999999 89999999876543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.59  E-value=0.005  Score=61.72  Aligned_cols=41  Identities=22%  Similarity=0.221  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|||+|+ |++|...++.+... |++|+++++++++++.+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~  227 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA  227 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            5789999999 89999999888888 99999999998877654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.57  E-value=0.007  Score=61.22  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+| +|++|...++.+...| ++|+++++++++++.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~  237 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE  237 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence            578999999 8999999999888899 59999999988776543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.56  E-value=0.0039  Score=62.83  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ |+||...++.+...|+ +|+++++++++++.+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            5789999995 9999999998888999 899999998887654

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.55  E-value=0.021  Score=56.40  Aligned_cols=33  Identities=21%  Similarity=0.383  Sum_probs=30.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDE  132 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~  132 (475)
                      +|.|+||+|.+|..++..|+..|  ..|+++|+++
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            58899999999999999999988  5899999987

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.55  E-value=0.0091  Score=59.21  Aligned_cols=41  Identities=27%  Similarity=0.292  Sum_probs=36.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ |++|...++.+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  206 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA  206 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            6889999997 8999999999989999999999998887654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.53  E-value=0.0062  Score=61.43  Aligned_cols=42  Identities=29%  Similarity=0.296  Sum_probs=36.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+|||+|+ |+||...++.+...|++|+++++++++++.+.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~  235 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK  235 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5889999997 89999999988889999999999988877554

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.52  E-value=0.003  Score=63.37  Aligned_cols=42  Identities=21%  Similarity=0.341  Sum_probs=37.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+|+ |+||...++.+...|++|+++++++++++.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~  220 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM  220 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            5889999999 99999999988889999999999988776543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.49  E-value=0.028  Score=55.91  Aligned_cols=48  Identities=19%  Similarity=0.291  Sum_probs=41.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      ..+.+.|+|+ |++|.++|..|+..|.  .|+++|+++++++..+.+|...
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~   67 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHG   67 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhh
Confidence            4568899997 9999999999999997  8999999999888888777653

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.46  E-value=0.0039  Score=62.49  Aligned_cols=42  Identities=26%  Similarity=0.271  Sum_probs=36.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+|+|+|+ |+||...++.+...|++|+++++++++++.+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~  221 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEAL  221 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence            6899999995 99999999988889999999999987766543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.42  E-value=0.007  Score=60.82  Aligned_cols=42  Identities=17%  Similarity=0.216  Sum_probs=35.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAK-RGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~-~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+||+|++|...++.+.. .|++|+++++++++++.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV  213 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            588999999999999988776655 588999999998877654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.40  E-value=0.0052  Score=61.85  Aligned_cols=42  Identities=24%  Similarity=0.330  Sum_probs=36.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+|+ |+||...++.+...|+ +|+++++++++++.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~  232 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK  232 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            5789999995 9999999998888999 8999999988876543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.40  E-value=0.006  Score=60.67  Aligned_cols=42  Identities=14%  Similarity=0.058  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|||+|+ |+||...++.+...  |++|+++++++++++.+.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~  213 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL  213 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH
Confidence            7899999999 89999999888888  999999999988776543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.40  E-value=0.026  Score=57.14  Aligned_cols=44  Identities=18%  Similarity=0.058  Sum_probs=38.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      +.+++|+|.|+ |.+|..+++.+...|++|++++|+.++++.+.+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            46789999998 799999999999999999999999988776543

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.40  E-value=0.016  Score=57.89  Aligned_cols=41  Identities=24%  Similarity=0.297  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  212 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA  212 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            5889999996 8999999988888999 899999998876644

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.40  E-value=0.0066  Score=61.40  Aligned_cols=44  Identities=14%  Similarity=0.164  Sum_probs=38.0

Q ss_pred             CCCCEEEEec-CCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          96 PTNGTLSVTG-GSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        96 l~gk~vLITG-as~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      ..|.+|||.| |+|++|...++.+...|++|+++++++++++.+.
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~  213 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK  213 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            4578899997 9999999999988889999999999988776543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.34  E-value=0.0055  Score=61.74  Aligned_cols=41  Identities=27%  Similarity=0.361  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ |+||...++.+...|+ +|+++++++++++.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  232 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA  232 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5789999995 9999999998888999 899999998887654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.32  E-value=0.0067  Score=61.14  Aligned_cols=41  Identities=22%  Similarity=0.272  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|||+|+ |+||...++.+...|+ +|+++++++++++.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  236 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA  236 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5789999995 9999999998888999 899999998887654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.31  E-value=0.011  Score=59.44  Aligned_cols=40  Identities=13%  Similarity=0.013  Sum_probs=34.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      -.|++|||+||+|++|...++.+...|++|+.+. +.++++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD  202 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence            4688999999999999999999999999998886 566655

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.27  E-value=0.014  Score=58.16  Aligned_cols=53  Identities=21%  Similarity=0.235  Sum_probs=43.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh-------------------hHHHHHHHHHHHhCCC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE-------------------KKLLQAQEEIKKACPN  148 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~-------------------~~l~~~~~~l~~~~~~  148 (475)
                      .+++++|+|.|+ ||+|.++++.|+..|. +++++|++.                   .+.+.+++.+.+..+.
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~  103 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL  103 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCC
Confidence            356789999985 6999999999999998 899998753                   5677778888877654

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.26  E-value=0.0037  Score=60.88  Aligned_cols=45  Identities=20%  Similarity=0.205  Sum_probs=40.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .++.+|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.++++
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            5678999999997 6999999999999999 8999999998876654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.25  E-value=0.0058  Score=61.60  Aligned_cols=41  Identities=29%  Similarity=0.320  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  223 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA  223 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            5889999998 8999999998888999 899999998876543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.22  E-value=0.0061  Score=60.03  Aligned_cols=36  Identities=19%  Similarity=0.359  Sum_probs=32.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      -.|.+|+|+||+|++|...++.+...|++|+.++++
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            358899999999999999999999999999988754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.19  E-value=0.0072  Score=60.49  Aligned_cols=39  Identities=15%  Similarity=0.256  Sum_probs=33.1

Q ss_pred             CEEEEecCCChHHHHH-HHHH-HHcCCE-EEEEecChh---HHHHH
Q psy3252          99 GTLSVTGGSSGIGKHV-AIEA-AKRGAH-VTIVARDEK---KLLQA  138 (475)
Q Consensus        99 k~vLITGas~GIG~ai-A~~L-a~~Ga~-Vvl~~R~~~---~l~~~  138 (475)
                      ++|||+|+ |++|... ++.+ ...|++ |++++++++   +++.+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~  218 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII  218 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH
Confidence            89999999 9999999 7766 678997 999999887   66544

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.17  E-value=0.1  Score=51.83  Aligned_cols=47  Identities=21%  Similarity=0.292  Sum_probs=40.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      .+++.|+|+ |.+|..+|..|+..|.  .|+++|+++++++..+.+|...
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~   69 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHG   69 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhh
Confidence            457889998 9999999999999997  8999999999888777777653

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.16  E-value=0.0043  Score=62.67  Aligned_cols=41  Identities=27%  Similarity=0.296  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|||+|+ |+||...++.+...|+ +|+++++++++++.+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a  234 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA  234 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5789999998 9999999998888999 899999998887643

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.15  E-value=0.099  Score=51.55  Aligned_cols=48  Identities=19%  Similarity=0.151  Sum_probs=39.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC--hhHHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD--EKKLLQAQEEIK  143 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~--~~~l~~~~~~l~  143 (475)
                      .++.+++.|+|+ |.+|.++|..|+..|. +|++++++  +++++....++.
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~   55 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDML   55 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHH
Confidence            345678999996 9999999999999999 99999999  566665555544

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.15  E-value=0.0076  Score=60.58  Aligned_cols=83  Identities=23%  Similarity=0.372  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh-------------------hHHHHHHHHHHHhCCCCcchh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE-------------------KKLLQAQEEIKKACPNPKFIR  153 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~  153 (475)
                      -.+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+++.+.+.++.     
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-----  187 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE-----  187 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT-----
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC-----
Confidence            3456889999987 7999999999999998 899998863                   4667778888877654     


Q ss_pred             hhhHHHhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         154 FIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                                       .++..+..+++ +..++.       + +...|++|.+.
T Consensus       188 -----------------v~v~~~~~~i~-~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          188 -----------------ISVSEIALNIN-DYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             -----------------SEEEEEECCCC-SGGGGG-------G-SCCCSEEEECC
T ss_pred             -----------------CeEEEeecccC-chhhhh-------H-hccCCEEEEec
Confidence                             56777777777 433221       2 45788888765

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.11  E-value=0.0079  Score=60.54  Aligned_cols=41  Identities=24%  Similarity=0.331  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ |+||...++.+...|+ +|+++++++++++.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  232 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA  232 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            5789999995 9999999988888899 899999998887654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.03  E-value=0.011  Score=54.24  Aligned_cols=42  Identities=26%  Similarity=0.460  Sum_probs=37.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEE  141 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~  141 (475)
                      +++|+||+|.+|.++++.|++.|++|++++|+.++.+++.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            578999999999999999999999999999998887766544

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.98  E-value=0.038  Score=56.37  Aligned_cols=43  Identities=19%  Similarity=0.127  Sum_probs=38.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +.+.+|+|.|+ |.+|..+++.+...|++|++++++.++++.+.
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            46789999998 79999999999999999999999998776654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=95.97  E-value=0.015  Score=59.22  Aligned_cols=41  Identities=22%  Similarity=0.266  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  254 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA  254 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            5789999998 8999999988888999 899999998877644

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.95  E-value=0.0063  Score=60.89  Aligned_cols=36  Identities=28%  Similarity=0.355  Sum_probs=31.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      .|.+|||+||+|++|...++.+...|++|+++.++.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            588999999999999999888888899988776553

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.95  E-value=0.021  Score=60.96  Aligned_cols=53  Identities=21%  Similarity=0.235  Sum_probs=44.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh-------------------hHHHHHHHHHHHhCCC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE-------------------KKLLQAQEEIKKACPN  148 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~-------------------~~l~~~~~~l~~~~~~  148 (475)
                      .+++++|+|.|+ ||+|.++|+.|+..|. +++++|.+.                   .+.+.+++.+.+..+.
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~  395 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL  395 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCC
Confidence            357889999986 6999999999999998 899998864                   5777888888887764

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.92  E-value=0.02  Score=58.02  Aligned_cols=41  Identities=27%  Similarity=0.302  Sum_probs=35.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA  226 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH
Confidence            5889999995 9999999888888999 799999998877654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.91  E-value=0.089  Score=52.11  Aligned_cols=47  Identities=17%  Similarity=0.179  Sum_probs=39.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      +.+.+.|+|+ |.+|.++|..|+..|. +|+++++++++++....++..
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~   53 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAE   53 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhc
Confidence            3557899998 9999999999999998 999999999887766555554

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.89  E-value=0.0062  Score=58.34  Aligned_cols=42  Identities=17%  Similarity=0.260  Sum_probs=36.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .++| +++|.|+ ||.|++++..|++.|+ +|++++|+.++++++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4678 8999986 8999999999999999 899999998876543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.88  E-value=0.01  Score=57.36  Aligned_cols=41  Identities=27%  Similarity=0.347  Sum_probs=38.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +|+++|.|+ ||.|++++..|++.|.+|++++|+.++.++++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            899999996 89999999999999999999999999888776

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.82  E-value=0.0084  Score=56.13  Aligned_cols=72  Identities=8%  Similarity=0.038  Sum_probs=53.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .++++|.|+ |.+|..+++.|.+.|+ |++++++++..+.+.     .                         . +.++.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~-------------------------~-~~~i~   55 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S-------------------------G-ANFVH   55 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T-------------------------T-CEEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c-------------------------C-CeEEE
Confidence            357889997 8999999999999999 999999987765432     1                         1 45688


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      +|.+ +.+.++++      .....|.+|.+.+
T Consensus        56 gd~~-~~~~l~~a------~i~~ad~vi~~~~   80 (234)
T 2aef_A           56 GDPT-RVSDLEKA------NVRGARAVIVDLE   80 (234)
T ss_dssp             SCTT-CHHHHHHT------TCTTCSEEEECCS
T ss_pred             cCCC-CHHHHHhc------CcchhcEEEEcCC
Confidence            9999 87655443      1246788887654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.80  E-value=0.15  Score=50.94  Aligned_cols=47  Identities=19%  Similarity=0.287  Sum_probs=36.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCh--hHHHHHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDE--KKLLQAQEEIKK  144 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~--~~l~~~~~~l~~  144 (475)
                      .-+|.||||+|+||..++..|+....       .+.|+|.++  ..++-+.-++..
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~   79 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED   79 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh
Confidence            44799999999999999999987643       689999875  345555666654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.74  E-value=0.009  Score=59.50  Aligned_cols=41  Identities=32%  Similarity=0.423  Sum_probs=36.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|||+|+ |+||...++.+...|++|+++++++++++.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            5889999997 9999999998888999999999998887654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=95.73  E-value=0.022  Score=57.11  Aligned_cols=41  Identities=22%  Similarity=0.238  Sum_probs=35.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|++|||+|+ |+||...++.+...|+ +|+++++++++++.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a  231 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA  231 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            5789999995 8999999988888899 699999998877654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.63  E-value=0.024  Score=57.51  Aligned_cols=41  Identities=20%  Similarity=0.293  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|||+|+ |+||...++.+...|+ +|+++++++++++.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL  226 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            5889999996 9999999888888899 999999998877643

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.62  E-value=0.024  Score=56.34  Aligned_cols=44  Identities=14%  Similarity=0.102  Sum_probs=37.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .+|.|.|| |.+|.++|..|+..|. +|+++++++++++.....+.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~   54 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS   54 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHH
Confidence            47889998 9999999999999998 99999999988877554444

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.58  E-value=0.022  Score=57.38  Aligned_cols=47  Identities=17%  Similarity=0.202  Sum_probs=41.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++.||+|+|.|. |.+|..+|+.|.+.|++|++.+++.++++++++++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999996 88999999999999999999999988877766553

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.57  E-value=0.11  Score=50.12  Aligned_cols=44  Identities=23%  Similarity=0.313  Sum_probs=38.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      ++|.|.|+ |.+|..+|..|++.|++|++++++++.++++.+.+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~   48 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFE   48 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHH
Confidence            56777775 789999999999999999999999998888776643

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.56  E-value=0.16  Score=49.61  Aligned_cols=43  Identities=14%  Similarity=0.215  Sum_probs=36.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .+.|+|+ |.+|.++|..|+..|.  +|+++++++++++....++.
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~   46 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLA   46 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHH
Confidence            4789999 9999999999999998  89999999988765444443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.45  E-value=0.018  Score=57.41  Aligned_cols=41  Identities=22%  Similarity=0.154  Sum_probs=35.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|||+|+ |+||...++.+...|+ +|+++++++++++.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  207 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA  207 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH
Confidence            5789999985 8999999988888999 899999998876544

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.43  E-value=0.14  Score=50.73  Aligned_cols=47  Identities=15%  Similarity=0.220  Sum_probs=40.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      +..+|.|+|+ |.+|..++..|+..+.  .|+++|+++++++..+.++..
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~   56 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSN   56 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHH
Confidence            3457999998 9999999999999886  799999999888877776654

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.40  E-value=0.028  Score=60.01  Aligned_cols=53  Identities=21%  Similarity=0.243  Sum_probs=43.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPN  148 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~  148 (475)
                      .+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+                   ..+.+.+++.+.+..+.
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~  396 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPL  396 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTT
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCC
Confidence            456789999985 6999999999999998 89999764                   25788888888887654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.33  E-value=0.022  Score=57.72  Aligned_cols=44  Identities=18%  Similarity=0.086  Sum_probs=38.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .+.+++|+|+|+ |++|+.+++.+...|++|++++++.++++.+.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            467999999996 89999999999999999999999987766543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.31  E-value=0.026  Score=57.90  Aligned_cols=40  Identities=10%  Similarity=0.170  Sum_probs=35.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .+|+|.|. |-+|..+++.|.+.|..|++++++++..+.+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            46889996 78999999999999999999999998776654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.30  E-value=0.26  Score=48.64  Aligned_cols=46  Identities=13%  Similarity=0.147  Sum_probs=38.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+++.|+| +|.+|.++|..|+..|. +|+++++++++++....++..
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~   51 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQ   51 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHh
Confidence            45788889 59999999999999988 999999999887766666653

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.19  E-value=0.18  Score=49.66  Aligned_cols=46  Identities=15%  Similarity=0.318  Sum_probs=38.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      ...|.|+|+ |.+|..++..|+..|.  .|+++|+++++++....++..
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~   53 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKH   53 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHh
Confidence            457889998 9999999999999984  899999998887765555544

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.19  E-value=0.49  Score=46.46  Aligned_cols=43  Identities=14%  Similarity=0.269  Sum_probs=33.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-C--CEEEEEecChhHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR-G--AHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~-G--a~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      +|.|+||+|.+|.+++..|+.+ +  ..|+++++++ +++....++.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~   47 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLS   47 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhh
Confidence            5789999999999999999886 5  3799999987 4444444454

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.08  E-value=0.053  Score=53.71  Aligned_cols=42  Identities=26%  Similarity=0.227  Sum_probs=35.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~  138 (475)
                      -.|.+++|+|+ |++|...++.+... |++|+++++++++++.+
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~  212 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA  212 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            35889999998 99999988777667 67999999998887654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=94.97  E-value=0.018  Score=56.78  Aligned_cols=39  Identities=23%  Similarity=0.285  Sum_probs=35.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +|||+||+||+|...++.+...|++|+++++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999989999999999988777654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=94.96  E-value=0.029  Score=55.05  Aligned_cols=41  Identities=27%  Similarity=0.293  Sum_probs=36.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      |+ |||+||+|++|...++.+...|++|+++++++++++.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            45 999999999999999999999999999999988876554

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=94.92  E-value=0.24  Score=48.32  Aligned_cols=42  Identities=29%  Similarity=0.477  Sum_probs=35.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++.|+|+ |.+|..+|..|+..|.  +|+++++++++++....++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l   45 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI   45 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh
Confidence            5789998 9999999999999998  9999999988776544444

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.86  E-value=0.021  Score=55.13  Aligned_cols=45  Identities=22%  Similarity=0.319  Sum_probs=39.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .++.+++++|.|+ |++|++++..|.+.|++|++++|+.++.+++.
T Consensus       125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            4677899999996 79999999999999999999999987766543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=94.80  E-value=0.029  Score=54.45  Aligned_cols=44  Identities=20%  Similarity=0.258  Sum_probs=39.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|+|+-+|+.+|..|+..|++|+++.++...+++
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~  199 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL  199 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            57899999999999999999999999999999999987665554

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.77  E-value=0.045  Score=52.23  Aligned_cols=46  Identities=26%  Similarity=0.366  Sum_probs=39.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEE  141 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~  141 (475)
                      .+++| +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.++
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            46788 8999996 7899999999999999999999998877766554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=94.76  E-value=0.056  Score=52.72  Aligned_cols=44  Identities=25%  Similarity=0.266  Sum_probs=38.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      ..+.|++++|.|+ |+||+++|+.|...|++|++++|+.++.+.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~  196 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARI  196 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            5788999999996 8999999999999999999999998765443

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=94.67  E-value=0.63  Score=45.27  Aligned_cols=44  Identities=14%  Similarity=0.215  Sum_probs=36.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .|.|+|+ |+||..+|..|+.+|.  +++|+|.+++..+..+.+|..
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h   47 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH   47 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhc
Confidence            3667895 9999999999999885  799999999887777777765

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=94.62  E-value=0.17  Score=49.89  Aligned_cols=44  Identities=18%  Similarity=0.294  Sum_probs=37.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      ++.|+|+ |.+|.++|..|+..|.  .|+++++++++++..+.+|..
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~   47 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRE   47 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhc
Confidence            4778996 9999999999999997  899999999887766666654

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=94.60  E-value=0.045  Score=56.48  Aligned_cols=51  Identities=24%  Similarity=0.338  Sum_probs=41.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh-------------------hHHHHHHHHHHHhCCC
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE-------------------KKLLQAQEEIKKACPN  148 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~-------------------~~l~~~~~~l~~~~~~  148 (475)
                      ++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+++.+.+..+.
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~  109 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN  109 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC
Confidence            4678999986 7999999999999998 899996531                   4677778888877654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=94.56  E-value=0.27  Score=48.42  Aligned_cols=46  Identities=17%  Similarity=0.297  Sum_probs=39.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      .+|.|+|+ |.+|..++..|+..+.  .|+++|+++++++..+.++...
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~   53 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDA   53 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence            47889998 9999999999999886  8999999998888777777543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.51  E-value=0.071  Score=51.78  Aligned_cols=43  Identities=28%  Similarity=0.356  Sum_probs=38.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.|++++|.| .|+||+++|+.|...|++|++++|+.++.+.
T Consensus       151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            468899999999 5899999999999999999999999876543

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=94.48  E-value=0.49  Score=46.41  Aligned_cols=46  Identities=13%  Similarity=0.312  Sum_probs=38.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      +++.|+|+ |.+|..++..|+..|.  .|+++|+++++++....++...
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~   54 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG   54 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH
Confidence            47899998 9999999999999885  7999999988776655555543

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=94.42  E-value=0.32  Score=47.74  Aligned_cols=43  Identities=14%  Similarity=0.286  Sum_probs=37.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      ++.|.|+ |.+|.+++..|+..|.  +|+++++++++++.....+.
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~   46 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLI   46 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHH
Confidence            5788998 9999999999999998  99999999888877665554

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=94.41  E-value=0.051  Score=58.54  Aligned_cols=35  Identities=26%  Similarity=0.463  Sum_probs=30.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD  131 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~  131 (475)
                      +.+.+|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D   50 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLD   50 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            44678999986 8999999999999998 89999875

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=94.38  E-value=0.19  Score=49.50  Aligned_cols=45  Identities=16%  Similarity=0.283  Sum_probs=34.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+|.|+|+ |.+|..++..|+..|.  .|+++|.++++++....++..
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~   54 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH   54 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH
Confidence            36788898 9999999999999997  899999998777655555543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.36  E-value=0.091  Score=51.06  Aligned_cols=43  Identities=30%  Similarity=0.441  Sum_probs=37.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++|.|.|+ |.+|.++|..|++.|++|++++|++++++...+.+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i   58 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   58 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence            57888887 89999999999999999999999998887765544

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=94.23  E-value=0.43  Score=46.67  Aligned_cols=44  Identities=14%  Similarity=0.109  Sum_probs=37.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      ++|.|+|+ |.+|..++..|+..|. +|+++|+++++++....++.
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~   47 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   47 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHH
Confidence            46889998 9999999999999997 99999999888876555554

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=94.20  E-value=0.041  Score=54.38  Aligned_cols=72  Identities=8%  Similarity=0.013  Sum_probs=54.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .++++|.|+ |.+|..+++.|.++|. |++++++++..+ +.+                              ..+.++.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------------------------------~~~~~i~  161 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------------------------------SGANFVH  161 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------------------------------TTCEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------------------------------CCcEEEE
Confidence            457999996 8999999999999999 999999988766 332                              2256788


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      +|.+ +++.++++      ...+.|.+|...+
T Consensus       162 gd~~-~~~~L~~a------~i~~a~~vi~~~~  186 (336)
T 1lnq_A          162 GDPT-RVSDLEKA------NVRGARAVIVDLE  186 (336)
T ss_dssp             SCTT-SHHHHHHT------CSTTEEEEEECCS
T ss_pred             eCCC-CHHHHHhc------ChhhccEEEEcCC
Confidence            9999 87766543      1236788876653

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=94.20  E-value=0.062  Score=51.82  Aligned_cols=43  Identities=14%  Similarity=0.236  Sum_probs=38.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +.||+++|.|+|+-+|+.+|..|+..|++|+++.++...+++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~  190 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM  190 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh
Confidence            8999999999999999999999999999999999876665543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=94.16  E-value=0.61  Score=45.65  Aligned_cols=44  Identities=25%  Similarity=0.315  Sum_probs=37.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG--AHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G--a~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      ++.|+|+ |.+|..++..|+..+  ..|+++|+++++++..+.++..
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~   47 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILH   47 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHH
Confidence            5789998 999999999999988  4899999999888876666654

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=94.13  E-value=0.087  Score=52.04  Aligned_cols=41  Identities=24%  Similarity=0.262  Sum_probs=32.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQ  137 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~  137 (475)
                      ..|.+++|+|+ ||+|...+..+... |++|+++++++++++.
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~  203 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL  203 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh
Confidence            45889999987 77887777777665 6799999999887654

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=94.13  E-value=0.066  Score=53.52  Aligned_cols=53  Identities=15%  Similarity=0.255  Sum_probs=42.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPN  148 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~  148 (475)
                      .+.+.+|+|.|+ ||+|.++++.|+..|. +++++|.+                   ..+.+.+++.+.+..+.
T Consensus        33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~  105 (346)
T 1y8q_A           33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPM  105 (346)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTT
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCC
Confidence            355779999985 7999999999999998 89998643                   34677788888876654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=94.05  E-value=0.017  Score=57.04  Aligned_cols=40  Identities=23%  Similarity=0.106  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      .++.|++++|.|++.=+|+.+|+.|+..|++|++++|+..
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~  212 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI  212 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchH
Confidence            3789999999999888899999999999999999998743

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=93.99  E-value=0.073  Score=55.07  Aligned_cols=53  Identities=23%  Similarity=0.109  Sum_probs=39.7

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      ...++++||+++|.|. |+.|.++|+.|.++|++|.+.|++........+.+.+
T Consensus         2 ~~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~   54 (451)
T 3lk7_A            2 KTITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE   54 (451)
T ss_dssp             --CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH
T ss_pred             cchhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh
Confidence            3446678999999998 7899999999999999999999865322223344544

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=93.95  E-value=0.15  Score=48.98  Aligned_cols=41  Identities=24%  Similarity=0.273  Sum_probs=35.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      +++.|.| .|.+|..+|+.|++.|++|++++|++++.+.+.+
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   42 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA   42 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            3677787 5899999999999999999999999988776543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=93.90  E-value=0.068  Score=51.78  Aligned_cols=44  Identities=25%  Similarity=0.277  Sum_probs=39.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|.|+-+|+.+|..|+..|++|+++.+....+++
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~  200 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD  200 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH
Confidence            57899999999999889999999999999999999886655543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=93.89  E-value=0.077  Score=51.16  Aligned_cols=45  Identities=27%  Similarity=0.277  Sum_probs=39.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      .+++++|.| +||.|++++..|++.|+ +|++++|+.++.+++++++
T Consensus       118 ~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            567899998 57999999999999998 7999999998888777654

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=93.89  E-value=0.19  Score=49.53  Aligned_cols=42  Identities=29%  Similarity=0.268  Sum_probs=34.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQA  138 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~  138 (475)
                      ..|++|+|+|+ ||+|...+..+...|+. |+++++++++++.+
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a  201 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA  201 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH
Confidence            46889999987 89999999989899986 56788888776543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=93.87  E-value=0.084  Score=51.54  Aligned_cols=43  Identities=28%  Similarity=0.192  Sum_probs=38.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      .++.||+++|.|.|+-+|+.+|..|+..|++|+++.|+...++
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~  203 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED  203 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence            6789999999999988999999999999999999998655554

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=93.81  E-value=0.19  Score=49.35  Aligned_cols=43  Identities=12%  Similarity=0.197  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      ..+++.|.| .|.+|..+|+.|++.|++|++++|++++.+++.+
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~   72 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAA   72 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH
Confidence            345777776 5899999999999999999999999988776543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=93.75  E-value=0.39  Score=45.38  Aligned_cols=42  Identities=14%  Similarity=0.314  Sum_probs=35.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQAQEE  141 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~~~~  141 (475)
                      .++.|.|+ |.+|..++..|++.|++ |.+++|+.++++++.+.
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~   53 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQK   53 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH
Confidence            36788886 89999999999999998 88999999887766553

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=93.74  E-value=0.17  Score=49.19  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=32.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      .+++.|.||.|.||.++|..|.+.|++|++++|+.+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            356889999999999999999999999999999865

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=93.68  E-value=0.067  Score=51.84  Aligned_cols=44  Identities=25%  Similarity=0.208  Sum_probs=38.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|+|+-+|+.+|..|...|++|+++.++...+++
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  200 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS  200 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            57899999999999889999999999999999999887655543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=93.40  E-value=0.19  Score=48.73  Aligned_cols=92  Identities=11%  Similarity=0.133  Sum_probs=58.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +++.|.| .|.+|..+|+.|++.|++|++++|++++.+++.+.    +... ..   ......         . ..++-.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~~-~~---~~~~~~---------~-aDvvi~   76 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA----GATL-AD---SVADVA---------A-ADLIHI   76 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT----TCEE-CS---SHHHHT---------T-SSEEEE
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC----CCEE-cC---CHHHHH---------h-CCEEEE
Confidence            3566776 68999999999999999999999999887765432    1100 00   000000         0 123334


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      =+. +...++.+++.+.....+=.++|++..+
T Consensus        77 ~vp-~~~~~~~v~~~l~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           77 TVL-DDAQVREVVGELAGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             CCS-SHHHHHHHHHHHHTTCCTTCEEEECSCC
T ss_pred             ECC-ChHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence            455 6677888887777655455677777653

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=93.39  E-value=0.15  Score=48.99  Aligned_cols=41  Identities=12%  Similarity=0.225  Sum_probs=36.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +++.|.|++|.+|.++++.|++.|++|++++|+.++++.+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47899999999999999999999999999999988776554

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=93.30  E-value=0.11  Score=50.43  Aligned_cols=45  Identities=22%  Similarity=0.269  Sum_probs=40.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .++.||+++|.|+|.-+|+.+|+.|+..|++|.++.++...+++.
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~  199 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH  199 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence            578999999999998899999999999999999999887666543

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=93.27  E-value=0.14  Score=50.75  Aligned_cols=39  Identities=21%  Similarity=0.118  Sum_probs=30.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLL  136 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~  136 (475)
                      .|++|+|+|++|++|...++.+...| .+|+.++ +.++.+
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~  181 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHE  181 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHH
Confidence            58899999999999998887666665 5888877 444443

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=93.17  E-value=0.12  Score=53.67  Aligned_cols=72  Identities=21%  Similarity=0.262  Sum_probs=53.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++|.|+ |-+|..+|+.|.++|++|++++++++.++.+.+++                             .+..+..|
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----------------------------~~~~i~Gd   54 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----------------------------DLRVVNGH   54 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----------------------------SCEEEESC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----------------------------CcEEEEEc
Confidence            5778876 68999999999999999999999998887765532                             24567788


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                      .+ +.+.++++-      ...-|++|..-
T Consensus        55 ~~-~~~~L~~Ag------i~~ad~~ia~t   76 (461)
T 4g65_A           55 AS-HPDVLHEAG------AQDADMLVAVT   76 (461)
T ss_dssp             TT-CHHHHHHHT------TTTCSEEEECC
T ss_pred             CC-CHHHHHhcC------CCcCCEEEEEc
Confidence            88 766555441      12567776543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=93.15  E-value=0.22  Score=47.24  Aligned_cols=77  Identities=14%  Similarity=0.199  Sum_probs=54.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +|+|.|++|.+|+.+++.+.+. |+.|+.+....+.++++.    ....                           -+..
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~~~---------------------------DvvI   50 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DGNT---------------------------EVVI   50 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HTTC---------------------------CEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----ccCC---------------------------cEEE
Confidence            5889999999999999999876 888775443333333222    1111                           1678


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      |++ .++.+...+..+.+.  ++++||-..|.
T Consensus        51 DfT-~p~a~~~~~~~a~~~--g~~~VigTTG~   79 (245)
T 1p9l_A           51 DFT-HPDVVMGNLEFLIDN--GIHAVVGTTGF   79 (245)
T ss_dssp             ECS-CTTTHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             Ecc-ChHHHHHHHHHHHHc--CCCEEEcCCCC
Confidence            999 888888888877665  68888877764

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=93.12  E-value=1.4  Score=42.82  Aligned_cols=42  Identities=14%  Similarity=0.254  Sum_probs=35.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCEEEEEecChhHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR--GAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~--Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++.|.|+ |.+|..+|..|+..  |.+|+++++++++++....++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l   45 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDM   45 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhH
Confidence            5778998 99999999999985  789999999988877654333

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=93.11  E-value=0.11  Score=47.87  Aligned_cols=39  Identities=18%  Similarity=0.315  Sum_probs=33.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +++.|.| +|.+|.++++.|++.|++|++++|+.++.+++
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            4688888 89999999999999999999999998766543

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=93.03  E-value=0.1  Score=50.96  Aligned_cols=44  Identities=18%  Similarity=0.076  Sum_probs=39.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|++.-+|+.+|+.|+..|++|+++.++...+++
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  204 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE  204 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHH
Confidence            57899999999999999999999999999999999887665544

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=92.95  E-value=0.15  Score=49.14  Aligned_cols=194  Identities=13%  Similarity=0.094  Sum_probs=96.8

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCEEE-EEecChhHH--HHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAK-RGAHVT-IVARDEKKL--LQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~-~Ga~Vv-l~~R~~~~l--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      +|+|+|++|.+|+.+++.+.+ .|+.|+ +++++.+..  +.+.+ +..... ..   +...     ....... ..+ =
T Consensus         7 kV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~-~~g~~~-~~---v~~~-----~dl~~~l-~~~-D   74 (273)
T 1dih_A            7 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGE-LAGAGK-TG---VTVQ-----SSLDAVK-DDF-D   74 (273)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTC-SSSSSC-CS---CCEE-----SCSTTTT-TSC-S
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHH-HcCCCc-CC---ceec-----CCHHHHh-cCC-C
Confidence            799999999999999999875 466766 566654321  00000 000000 00   0000     0000000 011 1


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +..|++ .++.....+..+.+.  ++++++-+.|..         .++.+.+...  ... .+-+=..++  -+.+|+  
T Consensus        75 vVIDft-~p~~~~~~~~~a~~~--G~~vVigTtG~~---------~e~~~~L~~~--a~~-~~vv~a~N~--siGvn~--  135 (273)
T 1dih_A           75 VFIDFT-RPEGTLNHLAFCRQH--GKGMVIGTTGFD---------EAGKQAIRDA--AAD-IAIVFAANF--SVGVNV--  135 (273)
T ss_dssp             EEEECS-CHHHHHHHHHHHHHT--TCEEEECCCCCC---------HHHHHHHHHH--TTT-SCEEECSCC--CHHHHH--
T ss_pred             EEEEcC-ChHHHHHHHHHHHhC--CCCEEEECCCCC---------HHHHHHHHHh--cCC-CCEEEEecC--cHHHHH--
Confidence            457999 888888888887775  677887676632         3333333110  000 000000000  144443  


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc---------------cCCcEEEE
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK---------------QSGLTITL  320 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~---------------~~gIrVn~  320 (475)
                      .+.+++.+.+.|...  -.|=.+=   .+....--.+|++++...+.+.+.+...+.               +.+|.|.+
T Consensus       136 ~~~l~~~aa~~~~~~--~dieiiE---~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s  210 (273)
T 1dih_A          136 MLKLLEKAAKVMGDY--TDIEIIE---AHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFAT  210 (273)
T ss_dssp             HHHHHHHHHHHHTTT--SEEEEEE---EECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEE
T ss_pred             HHHHHHHHHHhcCCC--CCEEEEE---eecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEE
Confidence            455666666666421  1222221   122233345689998877766655543221               34677888


Q ss_pred             EeCCCCCCC
Q psy3252         321 CLPPDTDTP  329 (475)
Q Consensus       321 V~PG~v~T~  329 (475)
                      +.-|.|-..
T Consensus       211 ~R~g~vvg~  219 (273)
T 1dih_A          211 VRAGDIVGE  219 (273)
T ss_dssp             EECTTCCEE
T ss_pred             EeCCCCCcc
Confidence            876666544

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=92.94  E-value=1.2  Score=44.78  Aligned_cols=46  Identities=15%  Similarity=0.228  Sum_probs=34.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--E---EEEEec----ChhHHHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--H---VTIVAR----DEKKLLQAQEEIKK  144 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~---Vvl~~R----~~~~l~~~~~~l~~  144 (475)
                      .+|.||||+|.||.+++..|+..+.  .   |++.+.    ++++++..+-+|..
T Consensus        33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h   87 (375)
T 7mdh_A           33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED   87 (375)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHh
Confidence            4688999999999999999998875  2   777554    34446666666654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	475
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-36
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-35
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	5e-33
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-32
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-32
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-31
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-31
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-31
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-30
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	9e-30
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-29
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-29
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	6e-29
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	9e-29
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-28
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-28
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-28
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-28
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-28
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-27
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-27
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-27
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-27
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-27
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-26
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	8e-26
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-25
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	7e-25
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-25
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-24
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-24
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-24
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	6e-24
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-23
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-23
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-23
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-23
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-22
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	7e-22
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-21
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-21
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	7e-21
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-20
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-20
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-20
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-20
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-19
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-19
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	3e-19
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-18
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-18
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	7e-18
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	8e-18
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-17
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	5e-17
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-15
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-15
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-15
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-14
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-14
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-13
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-09
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	4e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	8e-08
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	4e-07
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	5e-07
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-06
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	5e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	9e-06
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	8e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-04
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	4e-04
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	4e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.001

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 3e-36
 Identities = 54/241 (22%), Positives = 86/241 (35%), Gaps = 49/241 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG   GIG+  A E AK  + + +   ++  L +   + K                   
Sbjct: 12  ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK-------------- 57

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +    +D S + E+I S+ +      G V +LVN AG+     L      
Sbjct: 58  ----------VHTFVVDCS-NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDP 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            I                         ++N+      TKA +  M +   G IV  AS A
Sbjct: 107 QI---------------------EKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA 145

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEV---KQSGLTITLCLPPDTDTPGFENEEKSKP 339
            ++ +  L AY SSKFA  GF + L  E+   + +G+  T   P   +T   +N   S  
Sbjct: 146 GHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLG 205

Query: 340 R 340
            
Sbjct: 206 P 206

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 2e-35
 Identities = 51/261 (19%), Positives = 88/261 (33%), Gaps = 50/261 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG  VA    ++G  V   AR    + +   E K A      I          
Sbjct: 15  VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI---------- 64

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+S + E+I S       +   V + +N AG+A   TL   +  
Sbjct: 65  ------------PYRCDLS-NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTS 111

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG--RGCIVITAS 280
                                    + ++N+      T+   + MK+R    G I+   S
Sbjct: 112 GW---------------------KDMFNVNVLALSICTREAYQSMKERNVDDGHIININS 150

Query: 281 QAANLGI--YGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTDTPGFENEEK 336
            + +  +       Y+++K+A+    E L  E++  Q+ +  T   P   +T        
Sbjct: 151 MSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD 210

Query: 337 SKPRETSLISQTGGLYRPEVV 357
             P + +   +     +PE V
Sbjct: 211 KDPEKAAATYEQMKCLKPEDV 231

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  123 bits (310), Expect = 5e-33
 Identities = 49/237 (20%), Positives = 82/237 (34%), Gaps = 52/237 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG+ +A   A+ GA V +     +   +  E I  A                 
Sbjct: 10  VTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGA----------------- 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +  +D+  D       ++ A    G V +LVN A +A  G+   + + 
Sbjct: 52  ------------FFQVDLE-DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLP 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                   WR   V+++NL   +H++      M++ G G IV  AS  
Sbjct: 99  E-------------------WRR--VLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ 137

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
                   AAY +SK  L     +L +++    + +    P    T          P
Sbjct: 138 GLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP 194

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  122 bits (306), Expect = 3e-32
 Identities = 42/227 (18%), Positives = 85/227 (37%), Gaps = 39/227 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S+GIG+  AI  A+ GA+VTI  R  ++L + ++ I K+  + K +  +       
Sbjct: 10  ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV------ 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D++   +     +   + + G + +LVN AG A+          
Sbjct: 64  ---------------ADVT-TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTD 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                            + ++     + LNL   I MTK +   +       + +++  A
Sbjct: 108 QG---------------IDIYH--KTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVA 150

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                     Y  +K AL  +  +  +++ + G+ +    P   +T 
Sbjct: 151 GPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG 197

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  120 bits (303), Expect = 4e-32
 Identities = 55/255 (21%), Positives = 91/255 (35%), Gaps = 50/255 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG++GIG+ +A   A  GA + I          A+  I+                   
Sbjct: 10  ITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLGRR-------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  V  D+S    ++ +  +  +   G   +LVN AG+      +E+T +
Sbjct: 54  ----------VLTVKCDVS-QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                               W+     ++N+     M KA V GMK+ G G I+   S  
Sbjct: 103 Q-------------------WKK--TFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT 141

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
             L I     Y S+K A  GF  AL  ++ + G+T+    P    T   E    S   + 
Sbjct: 142 YWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDV 201

Query: 343 --SLISQTGGLYRPE 355
             +++     L  P 
Sbjct: 202 LPNMLQAIPRLQVPL 216

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 1e-31
 Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 52/246 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG  GIG  +       GA V I  +DE      ++E+  A                 
Sbjct: 11  VTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA----------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA-LCGTLEEMTM 221
                       ++  D++   +++++ +   + R G +  +VN AG        EE + 
Sbjct: 54  -----------VFILCDVT-QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSA 101

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           Q                    +R   +++LNL GT  +TK  +  ++ + +G ++  +S 
Sbjct: 102 QG-------------------FR--QLLELNLLGTYTLTKLALPYLR-KSQGNVINISSL 139

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
              +G      Y ++K A+    +AL ++    G+ +    P +  TP +E      P  
Sbjct: 140 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP 199

Query: 342 TSLISQ 347
            + I +
Sbjct: 200 RASIRE 205

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  120 bits (301), Expect = 1e-31
 Identities = 42/231 (18%), Positives = 85/231 (36%), Gaps = 39/231 (16%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S+GIG+  A+  A+ GA VTI  R  ++L + +++I  A  + + +  +       
Sbjct: 10  ITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV------ 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D++         L   + + G + +LVN AG A+  +  +    
Sbjct: 64  ---------------ADVT-TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKT--- 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                       G    +  +     ++LNL   I +TK  V  +       + I++  +
Sbjct: 105 ------------GTAQSIESYD--ATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIAS 150

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
                     Y+ +K A+  +     +++ Q G+ +    P    T     
Sbjct: 151 GLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA 201

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  118 bits (297), Expect = 4e-31
 Identities = 48/231 (20%), Positives = 87/231 (37%), Gaps = 49/231 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ G+G   A +A   GA V +    +++      E+  A                 
Sbjct: 10  ITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA---------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y  LD++   E+ +  +  A +  G V  LVN AG+            
Sbjct: 54  -----------RYQHLDVT-IEEDWQRVVAYAREEFGSVDGLVNNAGI------------ 89

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                        +    ++ R   V+++NL G     K ++  MK  G G IV  +S A
Sbjct: 90  ---------STGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
             +G+   ++Y +SK+ ++G ++   +E+    + +    P  T TP    
Sbjct: 141 GLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE 191

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  116 bits (292), Expect = 1e-30
 Identities = 47/256 (18%), Positives = 80/256 (31%), Gaps = 57/256 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+         GA V  V R    L+   +E                     
Sbjct: 10  VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------------------ 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     IE V +D+         A + A+   GPV +LVN A + +     E+T +
Sbjct: 52  ----------IEPVCVDLGD-----WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKE 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALV-EGMKQRGRGCIVITASQ 281
                                       +NL     +++ +  + + +   G IV  +S 
Sbjct: 97  AF---------------------DRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM 135

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
            A++    L  Y+S+K A+    +A+ ME+    + +    P    T   +         
Sbjct: 136 VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFA 195

Query: 342 TSLISQT--GGLYRPE 355
             L  +         E
Sbjct: 196 RKLKERHPLRKFAEVE 211

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  114 bits (287), Expect = 9e-30
 Identities = 53/260 (20%), Positives = 88/260 (33%), Gaps = 57/260 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SG+G  V       GA V     +E    Q   E+ +                  
Sbjct: 11  VTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS---------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       +V  D+S    +    +     R G + +LVN AG+ L G +E   ++
Sbjct: 55  -----------MFVRHDVS-SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                   +    ++ +N        +  +  MK+ G G I+  AS +
Sbjct: 103 D-------------------FSR--LLKINTESVFIGCQQGIAAMKETG-GSIINMASVS 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTI--TLCLPPDTDTPGFENEEKSKPR 340
           + L I   A Y++SK A+     A  +  ++ G  I      P    TP  +        
Sbjct: 141 SWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS 200

Query: 341 ETSLISQT-----GGLYRPE 355
           +  ++        G  Y PE
Sbjct: 201 KEMVLHDPKLNRAGRAYMPE 220

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  114 bits (286), Expect = 1e-29
 Identities = 44/260 (16%), Positives = 76/260 (29%), Gaps = 57/260 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
                 GIG   + E  KR     ++    +    A  E+K   P               
Sbjct: 10  FVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVN------------ 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I + + D++      +  L+   D+   V +L+N AG+     +E     
Sbjct: 57  ----------ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERT--- 103

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR---GRGCIVITA 279
                                     I +N  G ++ T A+++   +R     G I    
Sbjct: 104 --------------------------IAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC 137

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
           S      I+ +  Y++SK A+  F  +L      +G+T     P  T TP          
Sbjct: 138 SVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLD 197

Query: 340 RETSLISQTGG--LYRPEVV 357
            E  +            E  
Sbjct: 198 VEPRVAELLLSHPTQTSEQC 217

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  113 bits (285), Expect = 2e-29
 Identities = 50/234 (21%), Positives = 88/234 (37%), Gaps = 50/234 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ GIG  +A +  + GA V I  R      +A + +                    
Sbjct: 11  ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ--------------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I++   D S D +             GPV  LVN AG+A+  ++EE T  
Sbjct: 56  ----------IQFFQHDSS-DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTA 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG-CIVITASQ 281
           +                        ++ +NL G    T+  ++ MK +G G  I+  +S 
Sbjct: 105 EW---------------------RKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEV--KQSGLTITLCLPPDTDTPGFEN 333
              +G   L AY +SK A++  +++  ++   K   + +    P    TP  ++
Sbjct: 144 EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD 197

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  113 bits (284), Expect = 6e-29
 Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 40/227 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   G+G+  A+  A+RGA V +           +                  +++ +
Sbjct: 12  VTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAA-------------DKVVE 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       Y         E     ++ A+D  G + ++VN AG+    +   ++ +
Sbjct: 59  EIRRRGGKAVANYD------SVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDE 112

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                        +  ++L G+  +T+A  + MK++  G I++TAS +
Sbjct: 113 DW---------------------DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASAS 151

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
              G +G A Y+++K  L G A  L +E +++ +      P      
Sbjct: 152 GIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRM 198

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  111 bits (279), Expect = 9e-29
 Identities = 52/245 (21%), Positives = 90/245 (36%), Gaps = 53/245 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAH-------VTIVARDEKKLLQAQEEIKKACPNPKFIRFI 155
           +TG   GIG+ +A+E A+   H       + + +R    L +   E +            
Sbjct: 6   ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL------- 58

Query: 156 EYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT 215
                             + ++ DIS D  ++R      ++R G +  LVN AG+   G 
Sbjct: 59  -----------------TDTITADIS-DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA 100

Query: 216 LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCI 275
           L ++T +D                         ++ NL GT  +T+AL   M+++  G I
Sbjct: 101 LSDLTEEDFDYT---------------------MNTNLKGTFFLTQALFALMERQHSGHI 139

Query: 276 VITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE 335
               S AA       + Y  SKF  +G  E + +  ++  + IT   P    TP +   +
Sbjct: 140 FFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD 199

Query: 336 KSKPR 340
                
Sbjct: 200 DEMQA 204

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 1e-28
 Identities = 46/288 (15%), Positives = 88/288 (30%), Gaps = 54/288 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTGG+ GIG  +  +  +     V + ARD  +   A ++++    +P+F +        
Sbjct: 8   VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQL------- 60

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         +      D ++IR+         G + +LVN AG+A          
Sbjct: 61  -------------DID-----DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFH 102

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                                      +  N +GT  +   L+  +K +GR  +V  +S 
Sbjct: 103 IQA---------------------EVTMKTNFFGTRDVCTELLPLIKPQGR--VVNVSSI 139

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
            +   +   +     KF  +   E   + +    +  T       +         +K   
Sbjct: 140 MSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTK--- 196

Query: 342 TSLISQTGGLYR--PEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 387
             +   +    R   E  K   + +  C P    T     +    P E
Sbjct: 197 IGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEE 244

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 1e-28
 Identities = 47/244 (19%), Positives = 87/244 (35%), Gaps = 57/244 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG + GIG+  A     +GA V +V  + +  +Q +  + +     K            
Sbjct: 8   VTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK------------ 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       ++  D++ D + +R   +  +D  G + +LVN AG+      E+    
Sbjct: 56  ----------TLFIQCDVA-DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKT--- 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGC---IVITA 279
                                     + +NL   I  T   ++ M ++  G    I+  +
Sbjct: 102 --------------------------LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 135

Query: 280 SQAANLGIYGLAAYTSSKFALKGFAE--ALYMEVKQSGLTITLCLPPDTDTPGFENEEKS 337
           S A  + +     Y +SK  + GF    AL   +  SG+ +    P   +T   E+ EK 
Sbjct: 136 SLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE 195

Query: 338 KPRE 341
           +   
Sbjct: 196 ENMG 199

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  110 bits (277), Expect = 2e-28
 Identities = 43/231 (18%), Positives = 80/231 (34%), Gaps = 47/231 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG  +  E A  GA V   +R++K+L     + +      +            
Sbjct: 13  VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV--------- 63

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTM 221
                           D+S      +  +    +   G + +LVN AG+ +    ++ T+
Sbjct: 64  ---------------CDLS-SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTV 107

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                   +    ++ +N     H++      +K   RG +V  +S 
Sbjct: 108 ED-------------------YSL--IMSINFEAAYHLSVLAHPFLKASERGNVVFISSV 146

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
           +  L +   A Y ++K A+      L  E  +  + +    P    T   E
Sbjct: 147 SGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE 197

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 3e-28
 Identities = 48/256 (18%), Positives = 85/256 (33%), Gaps = 57/256 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+         GA V  V+R +  L     E                     
Sbjct: 12  VTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------------------ 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     IE V +D+         A + A+   GPV +LVN A +AL     E+T +
Sbjct: 54  ----------IEPVCVDLGD-----WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKE 98

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS-Q 281
                                      ++NL   I +++ +  G+  RG    ++  S Q
Sbjct: 99  AF---------------------DRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
            +   +   + Y S+K AL    + + +E+    + +    P    T   +       + 
Sbjct: 138 CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKA 197

Query: 342 TSLISQT--GGLYRPE 355
            +++++   G     E
Sbjct: 198 KTMLNRIPLGKFAEVE 213

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  110 bits (276), Expect = 5e-28
 Identities = 38/227 (16%), Positives = 75/227 (33%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+SG+G+ +       GA V ++ +  ++L + + +                     
Sbjct: 10  ITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNV---------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        +  D+    E+ + A    + R G +  L+  AG+    T      +
Sbjct: 54  -----------LGIVGDVR-SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPE 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                        V  +N+ G IH  KA +  +     G ++ T S A
Sbjct: 102 ESL----------------DAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNA 144

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
                 G   YT++K A+ G    L  E+    + +        ++ 
Sbjct: 145 GFYPNGGGPLYTAAKHAIVGLVRELAFELAP-YVRVNGVGSGGINSD 190

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  109 bits (273), Expect = 1e-27
 Identities = 47/231 (20%), Positives = 82/231 (35%), Gaps = 41/231 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG S+GIG+  A+  AK GA VTI  R+E +L + +++I KA    + I          
Sbjct: 9   ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA-------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D++ +       +   + + G + +LVN AG  L          
Sbjct: 61  -------------VVADVT-EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQP 106

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                              L++      LN    I MT+   E + +     + +++  A
Sbjct: 107 V-----------------ELYQ--KTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVA 147

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
                 G   Y  +K AL  +     +++ Q G+ +    P    T     
Sbjct: 148 GPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGA 198

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  108 bits (270), Expect = 2e-27
 Identities = 43/231 (18%), Positives = 81/231 (35%), Gaps = 52/231 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + GIG+      AK GA +     +E  L +A E +                    
Sbjct: 10  ITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG------------------- 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D++ D  ++      A+   G +  +V+ AG+       +M ++
Sbjct: 51  ----------AHPVVMDVA-DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLE 99

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                        V+ +NL G+  + KA  E M+++     ++  +  
Sbjct: 100 DW---------------------ELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASR 137

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
             LG  G A Y +S   + G    L +E+ + G+ +    P   +T     
Sbjct: 138 VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK 188

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  108 bits (271), Expect = 2e-27
 Identities = 47/240 (19%), Positives = 77/240 (32%), Gaps = 47/240 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG  +  E A  GA +   AR+E +L +   + +K                  
Sbjct: 13  VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-------------- 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDR-CGPVYMLVNCAGMALCGTLEEMTM 221
                     +     D S         +Q       G + +L+N  G        + T 
Sbjct: 59  ----------VTGSVCDAS-LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTA 107

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                         I  NL    H+++     +K  G G I+  +S 
Sbjct: 108 EDFS---------------------FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSI 146

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
           A  +     + Y+++K AL   A  L  E    G+      P    TP  E     + ++
Sbjct: 147 AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKK 206

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 2e-27
 Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 49/256 (19%)

Query: 91  KRYLAPTNGTLS-----VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKA 145
           + YLAP  G L      VTGG++GIGK +  E  + G++V I +R  ++L  A +E++  
Sbjct: 2   RSYLAP--GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQAN 59

Query: 146 CPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLV 205
            P  K  R I                    +  +I  + E + + ++  +D  G +  LV
Sbjct: 60  LPPTKQARVI-------------------PIQCNIR-NEEEVNNLVKSTLDTFGKINFLV 99

Query: 206 NCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVE 265
           N  G       E ++                           V++ NL GT +M KA+  
Sbjct: 100 NNGGGQFLSPAEHISS---------------------KGWHAVLETNLTGTFYMCKAVYS 138

Query: 266 GMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD 325
              +   G IV         G        +++  +    ++L +E   SG+ I    P  
Sbjct: 139 SWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGV 197

Query: 326 TDTPGFENEEKSKPRE 341
             +        S  + 
Sbjct: 198 IYSQTAVENYGSWGQS 213

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  107 bits (267), Expect = 5e-27
 Identities = 45/227 (19%), Positives = 74/227 (32%), Gaps = 46/227 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIG+ +A   AK  +HV  ++R +K      +EIK                   
Sbjct: 15  VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE-------------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                         + D+S   E I   +   +     V +LVN                
Sbjct: 61  ----------SSGYAGDVS-KKEEISEVINKILTEHKNVDILVNN--------------- 94

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                           +   W     +  NL    ++T+ + + M     G I+  +S  
Sbjct: 95  ----AGITRDNLFLRMKNDEWEDV--LRTNLNSLFYITQPISKRMINNRYGRIINISSIV 148

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP 329
              G  G A Y+SSK  + GF ++L  E+    +T+    P    + 
Sbjct: 149 GLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSD 195

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 2e-26
 Identities = 61/276 (22%), Positives = 95/276 (34%), Gaps = 56/276 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   AK GAHV + AR ++ L +      +             E    
Sbjct: 19  VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTME---- 74

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                               D       +  A    G + ML+          L    + 
Sbjct: 75  --------------------DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIH 114

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            +                        +++N    + +T A +  +KQ   G IV+ +S A
Sbjct: 115 HV---------------------RKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLA 152

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL--TITLCLPPDTDTPGFENEEKSKPR 340
             +    +AAY++SKFAL GF  ++  E   S +  +ITLC+    DT            
Sbjct: 153 GKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVH 212

Query: 341 ETSL--------ISQTGGLYRPEVVKQSGLTITLCL 368
             +         I + G L + EV   S L  TL +
Sbjct: 213 MQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 248

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  103 bits (259), Expect = 8e-26
 Identities = 47/259 (18%), Positives = 88/259 (33%), Gaps = 51/259 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+ GIG+  A    + GA V I    +    +    I                    
Sbjct: 11  ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I +V  D++   E++R+ +   + + G + ++    G+        +   
Sbjct: 54  --------DVISFVHCDVT-KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAG 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                        V+D+N+YG   + K     M    +G IV TAS +
Sbjct: 105 N-------------------EDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASIS 145

Query: 283 ANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN-----EEK 336
           +     G    YT++K A+ G   +L  E+ + G+ +    P    +P   +       +
Sbjct: 146 SFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR 205

Query: 337 SKPRETSLISQTGGLYRPE 355
            +       +  G L R E
Sbjct: 206 VEELAHQAANLKGTLLRAE 224

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  102 bits (254), Expect = 3e-25
 Identities = 44/242 (18%), Positives = 86/242 (35%), Gaps = 53/242 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG       A  GA+V ++ R     ++  E++ K                  
Sbjct: 14  VTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK------------- 60

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      +    D+S + + +   +Q      GP+  L+  AG+++     E+T +
Sbjct: 61  ----------TKAYQCDVS-NTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHE 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI----- 277
           D                        V D+N++G  +  +A+ +   Q+ +   ++     
Sbjct: 110 DF---------------------AFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM 148

Query: 278 ---TASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE 334
                +Q++  G      Y SSK A     + L  E   +G+ +    P   +T    + 
Sbjct: 149 SSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM 208

Query: 335 EK 336
           +K
Sbjct: 209 DK 210

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 7e-25
 Identities = 45/238 (18%), Positives = 89/238 (37%), Gaps = 56/238 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +T  + GIG+  A+  A+ GA V     +E KL + ++                      
Sbjct: 11  LTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG------------------- 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     I+   LD++K  +  +       +    + +L N AG    GT+ +   +
Sbjct: 52  ----------IQTRVLDVTKKKQIDQF-----ANEVERLDVLFNVAGFVHHGTVLDCEEK 96

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        W                ++LN+     M KA +  M  +  G I+  +S A
Sbjct: 97  D--------WDF-------------SMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVA 135

Query: 283 ANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKP 339
           +++ G+     Y+++K A+ G  +++  +  Q G+      P   DTP  +   +++ 
Sbjct: 136 SSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG 193

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (250), Expect = 8e-25
 Identities = 52/230 (22%), Positives = 84/230 (36%), Gaps = 49/230 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG S GIG+ +A   A RGA V   A  E       + +                    
Sbjct: 9   VTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK--------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        + L+++ D  +I S L+      G V +LVN AG+            
Sbjct: 54  ------------GLMLNVT-DPASIESVLEKIRAEFGEVDILVNNAGI------------ 88

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                           R+       +I+ NL     ++KA++  M ++  G I+   S  
Sbjct: 89  ---------TRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVV 139

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
             +G  G A Y ++K  L GF+++L  EV   G+T+ +  P   +T    
Sbjct: 140 GTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 189

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  100 bits (250), Expect = 1e-24
 Identities = 48/240 (20%), Positives = 82/240 (34%), Gaps = 43/240 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG SG+G+  A+  A  GA +++V    + L  ++  + +  P+ + +          
Sbjct: 9   ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVL---------- 58

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+S D   + + +    +R G +    N AG+       E    
Sbjct: 59  ------------TTVADVS-DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTA 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                   + LRG    L                          M+++G G +V TAS  
Sbjct: 106 AEFDKVVSINLRGVFLGLEKVLKI--------------------MREQGSGMVVNTASVG 145

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
              GI   + Y ++K  + G      +E  + G+ I    P    TP  EN  K    E 
Sbjct: 146 GIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPEN 205

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 99.4 bits (247), Expect = 2e-24
 Identities = 51/270 (18%), Positives = 90/270 (33%), Gaps = 49/270 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
           VTG S GIGK +A+   K G  V +  AR  K   +  ++I+                  
Sbjct: 6   VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS---- 61

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                                   ++ + ++ A+D  G + ++VN AG+     L  M  
Sbjct: 62  ---------------------KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKK 100

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
                +                           G    T+A  + M ++ +G I+  AS 
Sbjct: 101 SQWDEVIDLNL---------------------TGVFLCTQAATKIMMKKRKGRIINIASV 139

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
              +G  G A Y ++K  + GF++    E     + + +  P    +       +   ++
Sbjct: 140 VGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKK 199

Query: 342 TSLISQTGGLYRPEVVKQSGLTITLCLPPD 371
                  G   +PE V  +GL   L L P 
Sbjct: 200 ILGTIPLGRTGQPENV--AGLVEFLALSPA 227

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 99.4 bits (247), Expect = 3e-24
 Identities = 47/232 (20%), Positives = 82/232 (35%), Gaps = 48/232 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVA-RDEKKLLQAQEEIKKACPNPKFIRFIEYEEIK 161
            TG   GIG+ +AIE  +RGA V +      K   +   E+KK                 
Sbjct: 11  TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ------------- 57

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         +  DIS     + +    A+   G +  +++ +GM +     E+T 
Sbjct: 58  -----------GVAIQADIS-KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQ 105

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +                         V +LN  G   + +  ++  ++ GR  +  + + 
Sbjct: 106 ELFD---------------------KVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA- 143

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
           A   GI   A Y  SK A++GF  A  ++    G+T+    P    T  F+ 
Sbjct: 144 AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDE 195

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 98.3 bits (244), Expect = 6e-24
 Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 44/231 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A    K G  V + AR E+ L    +E+++A                 
Sbjct: 7   VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-------------- 52

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                      +  + D+      I + +   ++R GPV +LVN AG    G   E+  +
Sbjct: 53  ----------ADGRTCDVR-SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADE 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
               + +      +     + ++                    GM +RG G IV  AS  
Sbjct: 102 LWLDVVETNLTGVFRVTKQVLKAG-------------------GMLERGTGRIVNIASTG 142

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
              G+   A Y++SK  + GF +AL +E+ ++G+T+    P   +TP   +
Sbjct: 143 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 193

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 1e-23
 Identities = 48/231 (20%), Positives = 83/231 (35%), Gaps = 42/231 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG SSGIG H+A+  A   +    V    + L       + A              +  
Sbjct: 7   ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAA------------RALAC 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
              +      +E + LD+        +  +    R   +                     
Sbjct: 55  PPGS------LETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGL--------------- 93

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                     L G    L      +V+D+N+ GT+ M +A +  MK+RG G +++T S  
Sbjct: 94  ---------GLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVG 144

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
             +G+     Y +SKFAL+G  E+L + +   G+ ++L       T   E 
Sbjct: 145 GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK 195

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 96.7 bits (240), Expect = 3e-23
 Identities = 48/246 (19%), Positives = 86/246 (34%), Gaps = 47/246 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS GIG  +  E A  GA V   +R+EK+L +  E  ++   N +            
Sbjct: 11  VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV--------- 61

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTM 221
                           D+          +Q       G + +LVN AG+ +    ++ T 
Sbjct: 62  ---------------CDLL-SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE 105

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                        ++  N     H+++     +K    G ++  +S 
Sbjct: 106 KDY---------------------NIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSI 144

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
           A    +  ++ Y++SK A+    ++L  E  +  + +    P    TP  E   K  P +
Sbjct: 145 AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQ 204

Query: 342 TSLISQ 347
              I  
Sbjct: 205 KEEIDN 210

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 96.3 bits (239), Expect = 3e-23
 Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 49/230 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V+GG+ G+G          GA V      +++      E+  A                 
Sbjct: 11  VSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA---------------- 54

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       YV LD++      ++A+  A+   G +++LVN AG+   GT+E+  + 
Sbjct: 55  -----------RYVHLDVT-QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 102

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +                        ++D+NL G     +A+V+ MK+ GRG I+  +S  
Sbjct: 103 EW---------------------QRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE 141

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE 332
              G      YT++KFA++G  ++  +E+  SG+ +    P    TP  +
Sbjct: 142 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD 191

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 95.9 bits (238), Expect = 4e-23
 Identities = 42/255 (16%), Positives = 84/255 (32%), Gaps = 46/255 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGGS G+G  +A   A+ G  V + +R+ ++  +A +++ +                  
Sbjct: 10  VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE------------- 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+S +YE ++  L+   ++ G +  +VN AG+      EE  + 
Sbjct: 57  ----------TMAFRCDVS-NYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           +        + +     L           +L         +  G        +   ++ A
Sbjct: 106 E--------FRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYA 157

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A            SK  +    +AL  E  + G+ + +  P    T   E       +  
Sbjct: 158 A------------SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLD 205

Query: 343 SLISQT--GGLYRPE 355
            ++ +   G    PE
Sbjct: 206 YMLKRIPLGRTGVPE 220

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 93.7 bits (232), Expect = 6e-22
 Identities = 38/256 (14%), Positives = 82/256 (32%), Gaps = 47/256 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG +G+GK +    +  GA   I +R    L    E+I     N              
Sbjct: 30  ITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK------------- 76

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     +  +  D+  D + +++ +   +   G   +++N A        E ++  
Sbjct: 77  ----------VHAIQCDVR-DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN 125

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
             K +   +        L + +                      +K +     +   +  
Sbjct: 126 AWKTITDIVLNGTAFVTLEIGKQL--------------------IKAQKGAAFLSITTIY 165

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE-EKSKPRE 341
           A  G   +    S+K  ++  +++L  E  + G+   +  P    T G  +  + +   E
Sbjct: 166 AETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFE 225

Query: 342 TSLISQT--GGLYRPE 355
             +I +   G L   E
Sbjct: 226 KEMIGRIPCGRLGTVE 241

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 92.6 bits (229), Expect = 7e-22
 Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 44/242 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG  +A   A +GA + +    +   ++       A    K            
Sbjct: 9   VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK------------ 56

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     + Y   D+S   E +R  +  A+ + G + +LVN AG+     +E+   +
Sbjct: 57  ----------VLYDGADLS-KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                                    ++ LNL    H T A +  MK++G G I+  AS  
Sbjct: 106 KW---------------------DAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH 144

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
             +     +AY ++K  + GF +   +E    G+T     P    TP  E +  +   + 
Sbjct: 145 GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKN 204

Query: 343 SL 344
            +
Sbjct: 205 GV 206

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 90.9 bits (225), Expect = 2e-21
 Identities = 51/253 (20%), Positives = 94/253 (37%), Gaps = 52/253 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +SGIG+      A+ GA +  V R+E+ L +A   ++                   
Sbjct: 10  VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA---------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V  D+S D + + +    A++  G ++ + + AG+A       + ++
Sbjct: 54  -----------IAVVADVS-DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE 101

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                                    V+ +NL G+  + +   E +++      ++     
Sbjct: 102 AW---------------------EKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGSV 137

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
           A LG +GLA Y + K  + G A  L +E+ + G+ + + LP    TP           + 
Sbjct: 138 AGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQE 197

Query: 343 SLISQTGGLYRPE 355
              S  G   RPE
Sbjct: 198 VGASPLGRAGRPE 210

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 90.2 bits (223), Expect = 5e-21
 Identities = 41/264 (15%), Positives = 78/264 (29%), Gaps = 47/264 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG    IG   A+  A+ G  + ++  + + L +A+  +++                  
Sbjct: 10  VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE-------------- 55

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D++   E +   +   +   G +  L N AG        +    
Sbjct: 56  ----------ARSYVCDVT-SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS 104

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D        + R     +                          M  +  G IV TAS A
Sbjct: 105 DD-------FARVLTINVTGAFHVLKAVSR-------------QMITQNYGRIVNTASMA 144

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
              G   +AAY +SK A+    E   +++    + +    P           E+    + 
Sbjct: 145 GVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFM--WERQVELQA 202

Query: 343 SLISQTGGLYRPEVVKQSGLTITL 366
            + SQ        V +Q   ++ +
Sbjct: 203 KVGSQYFSTDPKVVAQQMIGSVPM 226

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 89.7 bits (222), Expect = 7e-21
 Identities = 44/231 (19%), Positives = 80/231 (34%), Gaps = 47/231 (20%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG  +GIGK +AI  A  GA V +   +        +EI++                  
Sbjct: 16  ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ-------------- 61

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           DI+   + + +    A+ + G V +LVN AG        +M M 
Sbjct: 62  ----------AFACRCDIT-SEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMA 109

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                          +LN++   H+++ +   M++ G G I+   S A
Sbjct: 110 DF---------------------RRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMA 148

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
           A      + +Y SSK A       +  ++ +  + +    P    T   ++
Sbjct: 149 AENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS 199

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 88.8 bits (219), Expect = 1e-20
 Identities = 38/250 (15%), Positives = 75/250 (30%), Gaps = 72/250 (28%)

Query: 103 VTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           VTG + GIG  +  +  K     H+   ARD +K  + +                     
Sbjct: 8   VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRV-------------- 53

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCG--PVYMLVNCAGMALC-GTLE 217
                          + L ++   +++ + +    +  G   + +L+N AG+ L  GT  
Sbjct: 54  -------------HVLPLTVT-CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNT 99

Query: 218 EMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRG---- 273
           E     I                        +D+N    + +T+ L+  +K         
Sbjct: 100 EPNRAVI---------------------AEQLDVNTTSVVLLTQKLLPLLKNAASKESGD 138

Query: 274 --------------CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT 319
                          +       +    + + AY  SK A+  F   L +++K   + + 
Sbjct: 139 QLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVV 198

Query: 320 LCLPPDTDTP 329
              P    T 
Sbjct: 199 NFCPGWVQTN 208

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 89.0 bits (220), Expect = 2e-20
 Identities = 40/253 (15%), Positives = 89/253 (35%), Gaps = 55/253 (21%)

Query: 87  HLQMKRYLAPTNGTLS-----VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA-QE 140
           +  +   L P + +L      VTG   GIG+ +A+E  +RG  V +   +  +  +    
Sbjct: 2   YDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVA 61

Query: 141 EIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGP 200
            IKK   +                           V  ++    E+I    + A+   G 
Sbjct: 62  AIKKNGSD------------------------AACVKANVG-VVEDIVRMFEEAVKIFGK 96

Query: 201 VYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT 260
           + ++ + +G+   G ++++T ++                        V  +N  G   + 
Sbjct: 97  LDIVCSNSGVVSFGHVKDVTPEEF---------------------DRVFTINTRGQFFVA 135

Query: 261 KALVEGMKQRGRGCIVITASQAANLGIYGLAAYTS-SKFALKGFAEALYMEVKQSGLTIT 319
           +   + ++  GR  ++ +             A  S SK A++ FA  + +++    +T+ 
Sbjct: 136 REAYKHLEIGGRLILMGS--ITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVN 193

Query: 320 LCLPPDTDTPGFE 332
           +  P    T  + 
Sbjct: 194 VVAPGGIKTDMYH 206

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 88.4 bits (218), Expect = 2e-20
 Identities = 38/242 (15%), Positives = 73/242 (30%), Gaps = 36/242 (14%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA-QEEIKKACPNPKFIRFIEYEEIK 161
           +TGG+  IG  +A+   ++G  V +  R  +   Q    E+  A                
Sbjct: 6   ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG------------- 52

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                   +     +SL  S   +     +  +    G   +LVN A       L     
Sbjct: 53  ------SAVLCKGDLSLSSS-LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDD 105

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR-----GRGCIV 276
            +     +P+            +   +   N    + + +A      +          +V
Sbjct: 106 TNGAADAKPID----------AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV 155

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEK 336
                  +L + G   YT +K AL G   A  +E+    + +    P  +  P    +E 
Sbjct: 156 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQET 215

Query: 337 SK 338
            +
Sbjct: 216 QE 217

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 87.8 bits (217), Expect = 3e-20
 Identities = 33/242 (13%), Positives = 68/242 (28%), Gaps = 53/242 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VT      G   A+  ++ G  V       K+  + +   +                   
Sbjct: 5   VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE------------------- 45

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTM 221
                       Y  L      +     ++      G V +LV+    A     +++  +
Sbjct: 46  -----------TYPQLKPM-SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAV 93

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
           +D                         ++        +  A+   MK+R  G I+   S 
Sbjct: 94  EDY---------------------RGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSA 132

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
                   L+ YTS++      A AL  E+ +  + +    P    +        ++P +
Sbjct: 133 TPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWK 192

Query: 342 TS 343
           T+
Sbjct: 193 TN 194

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 86.4 bits (213), Expect = 1e-19
 Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 45/239 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG   GIGK +A+   K G  V I   ++        EI +A  +              
Sbjct: 6   VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH-------------- 51

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D+S D + + +A++ A    G   ++VN AG+A    +E +T +
Sbjct: 52  ----------AVAVKVDVS-DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPE 100

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            +  +             A   ++                     K+   G I+   SQA
Sbjct: 101 IVDKVYNINVKGVIWGIQAAVEAF--------------------KKEGHGGKIINACSQA 140

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
            ++G   LA Y+SSKFA++G  +    ++   G+T+    P    TP +   ++     
Sbjct: 141 GHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEA 199

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 85.5 bits (211), Expect = 1e-19
 Identities = 48/253 (18%), Positives = 83/253 (32%), Gaps = 57/253 (22%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+ GIG  +A   A  G  V +  R                                
Sbjct: 12  VTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------------------------ 47

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        V +D++ D + +  A     +  GPV +LV+ AG++    L  MT +
Sbjct: 48  -----------FGVEVDVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEE 95

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                                    VI+ NL G   + +     M++   G ++   S +
Sbjct: 96  KF---------------------EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS 134

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRET 342
              GI   A Y +SK  + G A ++  E+ ++ +T  +  P   DT      ++   +  
Sbjct: 135 GLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGA 194

Query: 343 SLISQTGGLYRPE 355
                   +  P 
Sbjct: 195 LQFIPAKRVGTPA 207

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (209), Expect = 3e-19
 Identities = 46/262 (17%), Positives = 81/262 (30%), Gaps = 50/262 (19%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TGG+SG+G   A     +GA   ++           +++   C         E +    
Sbjct: 10  ITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTA 69

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                                           +D       +   +        +  T++
Sbjct: 70  LALAKGKFGR----------------------VDVAVNCAGIAVASKTYNLKKGQTHTLE 107

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQR------GRGCIV 276
           D                   ++    +D+NL GT ++ + +   M Q        RG I+
Sbjct: 108 D-------------------FQRV--LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVII 146

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN-EE 335
            TAS AA  G  G AAY++SK  + G    +  ++   G+ +    P    TP   +  E
Sbjct: 147 NTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE 206

Query: 336 KSKPRETSLISQTGGLYRPEVV 357
           K      S +     L  P   
Sbjct: 207 KVCNFLASQVPFPSRLGDPAEY 228

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 82.8 bits (204), Expect = 1e-18
 Identities = 55/231 (23%), Positives = 83/231 (35%), Gaps = 61/231 (26%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V   S GIG+ VA   ++ GA VTI AR+E+ L ++                        
Sbjct: 9   VLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR--------------------- 47

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                       YV  D+ KD +          ++   V +LV  AG    G  +E+T +
Sbjct: 48  ------------YVVCDLRKDLDL-------LFEKVKEVDILVLNAGGPKAGFFDELTNE 88

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
           D                         ID      I + +  +  MK++G G IV   S +
Sbjct: 89  DF---------------------KEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS 127

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
               I  L    S++ AL GF + L  EV   G+T+    P  T+T   + 
Sbjct: 128 VISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE 178

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.9 bits (204), Expect = 2e-18
 Identities = 36/239 (15%), Positives = 72/239 (30%), Gaps = 50/239 (20%)

Query: 103 VTGGSSGIGKHVAIEAAK---RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEE 159
           +TG S G G+ +A + A+    G+ + + AR E  L Q +EE+    P+ K         
Sbjct: 11  LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK--------- 61

Query: 160 IKKACPNPKFIRFIEYVSLDISKD---YENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                        +   + D+  +      + +  +          +L+N A      + 
Sbjct: 62  -------------VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSK 108

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
             + + D+  +                       LNL   + +T   +   +        
Sbjct: 109 GFLNVNDLAEVNN------------------YWALNLTSMLCLTSGTLNAFQDSPGLSKT 150

Query: 277 --ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
               +S  A     G   Y + K A     + L  E  +  + +    P   D    + 
Sbjct: 151 VVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQL 207

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 81.0 bits (199), Expect = 7e-18
 Identities = 29/259 (11%), Positives = 69/259 (26%), Gaps = 49/259 (18%)

Query: 103 VTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           V G ++   +G  +A +  + GA V +  + E+   +A++  +       F   +     
Sbjct: 13  VMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVT---- 68

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                                   E + +      +  G +  LV+              
Sbjct: 69  ----------------------QDEELDALFAGVKEAFGGLDYLVHAI------------ 94

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
                       + G +           ++++ Y  + + +     +++ G   IV    
Sbjct: 95  -----AFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGG--GIVTLTY 147

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR 340
            A+   +        +K AL+     L  E+   G+ +         T    +       
Sbjct: 148 YASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKM 207

Query: 341 ETSLISQT--GGLYRPEVV 357
              +            E V
Sbjct: 208 YDRVAQTAPLRRNITQEEV 226

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 80.2 bits (197), Expect = 8e-18
 Identities = 53/260 (20%), Positives = 89/260 (34%), Gaps = 62/260 (23%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTGG+SG+G+  A+    RG  V ++    +                             
Sbjct: 6   VTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------------------- 38

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                     + YV  D++   E++R A+  A +      ++           L +    
Sbjct: 39  ---------DLIYVEGDVT-REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPH 88

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALV------EGMKQRGRGCIV 276
            ++   +                  V+++NL GT ++ +             +  RG IV
Sbjct: 89  GLESFRR------------------VLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIV 130

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE-E 335
            TAS AA  G  G AAY +SK  +         E+   G+ +    P   DTP  +   E
Sbjct: 131 NTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE 190

Query: 336 KSKPRETSLISQTGGLYRPE 355
           K+K    + +     L RPE
Sbjct: 191 KAKASLAAQVPFPPRLGRPE 210

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 80.2 bits (197), Expect = 1e-17
 Identities = 45/232 (19%), Positives = 81/232 (34%), Gaps = 50/232 (21%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           +TG + GIG+  A    + GA V I   + +       EI  A                 
Sbjct: 10  ITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAA---------------- 53

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                        ++LD++ D  +I   +   +DR G +                     
Sbjct: 54  -----------CAIALDVT-DQASIDRCVAELLDRWGSI--------------------- 80

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI-TASQ 281
           DI V    L+       +       +  +N+ GT+ M +A+   M   GRG  +I  ASQ
Sbjct: 81  DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQ 140

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN 333
           A   G   +  Y ++K A+    ++  + + + G+ +    P   D   ++ 
Sbjct: 141 AGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG 192

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 78.6 bits (193), Expect = 5e-17
 Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 48/256 (18%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA-QEEIKKACPNPKFIRFIEYEEIK 161
           +TG S+G+GK +AI  A   A V +  R ++    +  EEIKK                 
Sbjct: 12  ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE------------- 58

Query: 162 KACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTM 221
                         V  D++    ++ + +Q A+   G + +++N AG+    +  EM++
Sbjct: 59  -----------AIAVKGDVT-VESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSL 106

Query: 222 QDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQ 281
            D   +        +       + +                    ++   +G ++  +S 
Sbjct: 107 SDWNKVIDTNLTGAFLGSREAIKYF--------------------VENDIKGTVINMSSV 146

Query: 282 AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
              +       Y +SK  +K   E L +E    G+ +    P   +TP    +     + 
Sbjct: 147 HEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQR 206

Query: 342 TSLISQT--GGLYRPE 355
             + S    G +  PE
Sbjct: 207 ADVESMIPMGYIGEPE 222

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 74.6 bits (182), Expect = 1e-15
 Identities = 30/252 (11%), Positives = 66/252 (26%), Gaps = 43/252 (17%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           ++G ++GIG          G  +  +   + +++                          
Sbjct: 6   ISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------------------- 40

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                           D+S      ++           +  LV CAG+     +    + 
Sbjct: 41  ----------------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVV- 83

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
            +        +  +   L        + ++   + H+             G      +  
Sbjct: 84  SVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV 143

Query: 283 ANLGIYG-LAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPRE 341
            + G  G   AY  SK AL            ++G+ +    P  T+TP  +   +     
Sbjct: 144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG 203

Query: 342 TSLISQTGGLYR 353
            S+      + R
Sbjct: 204 ESIAKFVPPMGR 215

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 73.0 bits (178), Expect = 3e-15
 Identities = 30/257 (11%), Positives = 64/257 (24%), Gaps = 48/257 (18%)

Query: 103 VTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           VTG +S   I   +A    + GA +    +++ KL    EE      +   ++       
Sbjct: 10  VTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVA--- 65

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                                 +  +I +               V+  G A    L+   
Sbjct: 66  ----------------------EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDY 103

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITAS 280
           +  +                         D++ Y  + M KA    +       ++  + 
Sbjct: 104 VNAVTREGF----------------KIAHDISSYSFVAMAKACRSMLNPGSA--LLTLSY 145

Query: 281 QAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSKPR 340
             A   I        +K +L+     +   +   G+ +         T      +  +  
Sbjct: 146 LGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKM 205

Query: 341 ETSLISQT--GGLYRPE 355
                + T        E
Sbjct: 206 LAHCEAVTPIRRTVTIE 222

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 71.8 bits (175), Expect = 6e-15
 Identities = 30/239 (12%), Positives = 61/239 (25%), Gaps = 57/239 (23%)

Query: 97  TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
           ++G + V GG   +G  +     K G  V  +         +   +       +      
Sbjct: 1   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTE------ 54

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
                                       E   S+LQ        V  +   AG    G+ 
Sbjct: 55  ----------------------QEQSILEQTASSLQ-----GSQVDGVFCVAGGWAGGSA 87

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
              +   +K  +  +    + + +A   +                        +  G + 
Sbjct: 88  --SSKDFVKNADLMIKQSVWSSAIAAKLAT--------------------THLKPGGLLQ 125

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSG--LTITLCLPPDTDTPGFEN 333
           +T + AA      +  Y  +K A+     +L  +         +   +P   DTP    
Sbjct: 126 LTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK 184

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 71.3 bits (173), Expect = 1e-14
 Identities = 34/270 (12%), Positives = 79/270 (29%), Gaps = 69/270 (25%)

Query: 90  MKRYLAPTNGTLSVTGGSSGIGKHVA---IEAAKRGAHVTIVARDEKKLLQAQEEIKKAC 146
           M   L        +TG + G+G  +    +   +   H+    R+ ++     +E++   
Sbjct: 2   MNSIL--------ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA----KELEDLA 49

Query: 147 PNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVN 206
            N   I  +E                   + L     Y+ + + ++      G   +  N
Sbjct: 50  KNHSNIHILE-------------------IDLRNFDAYDKLVADIEGVTKDQGLNVLFNN 90

Query: 207 CAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEG 266
                    +  +  Q++                        +  N    I + KA +  
Sbjct: 91  AGIAPKSARITAVRSQEL---------------------LDTLQTNTVVPIMLAKACLPL 129

Query: 267 MKQRGR-----------GCIVITASQAANLGIY---GLAAYTSSKFALKGFAEALYMEVK 312
           +K+  +             I+  +S   ++      G+ AY +SK AL    ++L +++ 
Sbjct: 130 LKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY 189

Query: 313 QSGLTITLCLPPDTDTPGFENEEKSKPRET 342
              +      P    T    +        +
Sbjct: 190 PQRIMCVSLHPGWVKTDMGGSSAPLDVPTS 219

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 69.3 bits (168), Expect = 8e-14
 Identities = 33/233 (14%), Positives = 57/233 (24%), Gaps = 7/233 (3%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           VTG +  +G+ +A      G  V +          A      A      I          
Sbjct: 7   VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 66

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
             P           S  ++  +      +       G   +LVN A       L      
Sbjct: 67  TAP-----VSGADGSAPVT-LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED 120

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
             +                L+ S  +    L        A      +     I+      
Sbjct: 121 GHE-PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 179

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE 335
            N  + G   YT +K AL+G   +  +E+    + +    P  +         
Sbjct: 180 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPA 232

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.2 bits (163), Expect = 3e-13
 Identities = 27/232 (11%), Positives = 60/232 (25%), Gaps = 57/232 (24%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V GG   +G         R   V  +   E +   A   +K                   
Sbjct: 7   VYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD---------------- 50

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                             ++  + + + +   +     V  ++  AG    G  +  ++ 
Sbjct: 51  ----------------SFTEQADQVTAEVGKLLGD-QKVDAILCVAGGWAGGNAKSKSL- 92

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
                                    +   +++ +   +         +  G + +  ++A
Sbjct: 93  -------------------FKNCDLMWKQSIWTSTISSHLAT--KHLKEGGLLTLAGAKA 131

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTIT--LCLPPDTDTPGFE 332
           A  G  G+  Y  +K A+    ++L  +             LP   DTP   
Sbjct: 132 ALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR 183

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 55.8 bits (133), Expect = 1e-09
 Identities = 20/175 (11%), Positives = 50/175 (28%), Gaps = 2/175 (1%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           + GG+  +GK +A+  A  G  + + +R E+K      E ++   +         +  + 
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEA 64

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                  I +   +              +   +            +       +    ++
Sbjct: 65  CDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE 124

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
             KV+     +       A        D+ + G    +K +V  +     G   +
Sbjct: 125 SEKVVSALHTIPAAR--FANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPL 177

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 55.0 bits (131), Expect = 4e-09
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 49/214 (22%)

Query: 98  NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIE 156
            GT+ VTGG+ G+G  +A   A+RGA H+ +V+R       A E +              
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELV-------------- 54

Query: 157 YEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL 216
             E++                  + +            +    P+  + + A     GT+
Sbjct: 55  -AELEALGARTTVAACDVTDRESVRELLGG--------IGDDVPLSAVFHAAATLDDGTV 105

Query: 217 EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIV 276
           + +T + I+   +                         G  ++ +      ++      V
Sbjct: 106 DTLTGERIERASRAKV---------------------LGARNLHE----LTRELDLTAFV 140

Query: 277 ITASQAANLGIYGLAAYTSSKFALKGFAEALYME 310
           + +S A+  G  GL  Y      L G A+    +
Sbjct: 141 LFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSD 174

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 51.3 bits (121), Expect = 8e-08
 Identities = 21/169 (12%), Positives = 43/169 (25%), Gaps = 9/169 (5%)

Query: 103 VTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           + G +   G G  VA   A  GA + +        +      +      + +      EI
Sbjct: 13  IAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEI 72

Query: 161 KKACPNPKFIRFIEYVSLDISK-------DYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
           KK  P        E V  D+             ++ A +      G + +LV+       
Sbjct: 73  KKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE 132

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKA 262
            +   +       +            L       +       ++    +
Sbjct: 133 VSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIAS 181

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 48.9 bits (115), Expect = 4e-07
 Identities = 17/171 (9%), Positives = 45/171 (26%), Gaps = 3/171 (1%)

Query: 103 VTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           + G ++   I   +A     +GA +     +E  L +    I +   +P        +E 
Sbjct: 10  IVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYELDVSKEE 68

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
                     + +  +   +       + AL+ ++                        T
Sbjct: 69  HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNT 128

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRG 271
           ++ +      +    Y         + V+ L         + L   + +  
Sbjct: 129 LKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHH 179

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 49.0 bits (115), Expect = 5e-07
 Identities = 20/178 (11%), Positives = 45/178 (25%), Gaps = 3/178 (1%)

Query: 103 VTG--GSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           V+G    S I  H+A  A ++GA + +   D  +L+Q   + +     P     ++ EE 
Sbjct: 11  VSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-RLPAKAPLLELDVQNEEH 69

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
             +              LD               ++            G+ +        
Sbjct: 70  LASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASM 129

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVIT 278
            + +  +  P                    + +  +   +       +    G     
Sbjct: 130 AKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNL 187

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.8 bits (109), Expect = 3e-06
 Identities = 18/167 (10%), Positives = 41/167 (24%), Gaps = 9/167 (5%)

Query: 103 VTG--GSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEI 160
           + G   ++G G  +A E +KR   +          +  +        N   I   +   I
Sbjct: 7   IAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNI 66

Query: 161 KKACPNPKFIRFIEYVSLDISK-------DYENIRSALQPAMDRCGPVYMLVNCAGMALC 213
               P          +  +              I         + G + MLV+    A  
Sbjct: 67  LDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE 126

Query: 214 GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMT 260
              + +       ++           L  +    +   +   ++   
Sbjct: 127 VQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYH 173

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 5e-06
 Identities = 22/155 (14%), Positives = 44/155 (28%), Gaps = 19/155 (12%)

Query: 90  MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNP 149
           +K+          + G +   G     +A + G  VT++ RD  +L            + 
Sbjct: 3   VKKIA--------IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR----PAHV 50

Query: 150 KFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAM-DRCGPVYMLVNCA 208
                ++  ++ K       +  +     D+S        A       +   V  +V C 
Sbjct: 51  VVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110

Query: 209 GMALCGTLEEM------TMQDIKVMEQPLWLRGYH 237
              L     ++         D   M + L   G  
Sbjct: 111 SAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLK 145

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 44.1 bits (103), Expect = 9e-06
 Identities = 12/208 (5%), Positives = 38/208 (18%), Gaps = 58/208 (27%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           V  G+  +G                              +         +   + ++ + 
Sbjct: 28  VLAGTGPVGMRS-------------------------AALLAGEGAEVVLCGRKLDKAQA 62

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
           A  +      +   + + + D            +     + +     + L    E +   
Sbjct: 63  AADSVNKRFKVNVTAAETADDAS--------RAEAVKGAHFVFTAGAIGL----ELLPQA 110

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQA 282
             +                         + +    +    L  G              +A
Sbjct: 111 AWQ---------------------NESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRA 149

Query: 283 ANLGIYGLAAYTSSKFALKGFAEALYME 310
                 G       +  +    E+    
Sbjct: 150 FGALGIGGLKLKLHRACIAKLFESSEGV 177

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 43.2 bits (100), Expect = 4e-05
 Identities = 16/153 (10%), Positives = 40/153 (26%), Gaps = 3/153 (1%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           + G +  IG+HVA  +   G    ++ R+      +++              +    I  
Sbjct: 8   LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG-SIDD 66

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQ 222
                + ++ ++ V   +       +  +  A+   G V                   ++
Sbjct: 67  HASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKR--FFPSEFGNDVDNVHAVE 124

Query: 223 DIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG 255
             K + +                  V      G
Sbjct: 125 PAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG 157

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 42.1 bits (97), Expect = 8e-05
 Identities = 15/61 (24%), Positives = 22/61 (36%)

Query: 96  PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFI 155
           P    + VTG +  +  HV  +  + G  V   AR   KL   Q+      P       +
Sbjct: 9   PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68

Query: 156 E 156
           E
Sbjct: 69  E 69

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.6 bits (93), Expect = 2e-04
 Identities = 15/159 (9%), Positives = 31/159 (19%), Gaps = 20/159 (12%)

Query: 90  MKRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA--RDEKKLLQAQEEIKKACP 147
           +   L        VTG S   G+ V  +  +           R  +   +   E      
Sbjct: 3   LPTVL--------VTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD---- 50

Query: 148 NPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNC 207
                     +       NP F      V L  +                          
Sbjct: 51  ------VFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYP 104

Query: 208 AGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSW 246
             +   G   ++    +  ++  + +             
Sbjct: 105 EQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLN 143

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.5 bits (93), Expect = 2e-04
 Identities = 22/203 (10%), Positives = 53/203 (26%), Gaps = 19/203 (9%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYE---- 158
           + G +   G+H+            ++A   K L +         P  + +  ++      
Sbjct: 7   LAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTA 66

Query: 159 --------EIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM 210
                   +   +    + + F   +++         R  L  +         +      
Sbjct: 67  FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVK 126

Query: 211 ALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL----YGTIH---MTKAL 263
                  +        + +P  L G      L          +    Y  I    + +AL
Sbjct: 127 GELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARAL 186

Query: 264 VEGMKQRGRGCIVITASQAANLG 286
                + G+G   + + +   LG
Sbjct: 187 WRLALEEGKGVRFVESDELRKLG 209

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 39.8 bits (91), Expect = 4e-04
 Identities = 14/177 (7%), Positives = 46/177 (25%), Gaps = 8/177 (4%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACP--NPKFIRFIEYEEI 160
           +TG +  +G+ +  +   +   V      +  +      + K      P  +        
Sbjct: 6   ITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITN-VLAVNKFFNEKKPNVVINCAAHTA 64

Query: 161 KKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMT 220
              C     + +        +          +        V+       +     +   +
Sbjct: 65  VDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQS 124

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVI 277
                 +E   +++  + +  + R+       LYG  +     +  + +      V+
Sbjct: 125 AYGKTKLEGENFVKALNPKYYIVRTA-----WLYGDGNNFVKTMINLGKTHDELKVV 176

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 40.1 bits (92), Expect = 4e-04
 Identities = 16/154 (10%), Positives = 41/154 (26%), Gaps = 4/154 (2%)

Query: 103 VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKK 162
           + GG+  IGK +   +   G    ++ R E      + ++          + IE      
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG-AKLIEASLDDH 66

Query: 163 ACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRC--GPVYMLVNCAGMALCGTLEEMT 220
                   +    +S        +        ++             +   +   + E  
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHA 126

Query: 221 MQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY 254
           +Q   +       +      A    +T +  N++
Sbjct: 127 LQPGSITFID-KRKVRRAIEAASIPYTYVSSNMF 159

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKL 135
           T++V G +   G  +   AA  G HV       K L
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL 40

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	475
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.97
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.78
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.75
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.67
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.64
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.63
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.62
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.62
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.58
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.58
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.58
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.58
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.52
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.5
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.49
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.49
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.48
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.47
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.46
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.45
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.45
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.45
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.45
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.4
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.4
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.19
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.14
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.11
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.01
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.96
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.94
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.93
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.8
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.77
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.64
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.61
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.57
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.53
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.53
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.44
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.42
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.41
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.35
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.31
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.15
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.12
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.1
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.05
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.04
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.0
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.99
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.95
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.92
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.87
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.87
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.75
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.69
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.65
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.6
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.58
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.53
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.48
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.46
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.43
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.39
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.38
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.37
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.36
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.36
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.21
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.13
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.11
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.03
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.01
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.0
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.0
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.97
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.95
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.9
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.86
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	95.76
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.75
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.74
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	95.74
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.72
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.6
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.59
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.58
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.57
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.41
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.39
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.26
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.12
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.07
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.03
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.96
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.83
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.71
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	94.66
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.57
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.57
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.56
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.53
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.52
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.23
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.64
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	93.44
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.04
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.58
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	92.57
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.53
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.43
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.42
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.26
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.18
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	91.95
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.92
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	91.66
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.47
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.44
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	91.1
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.06
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	90.98
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	90.74
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.74
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.65
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	89.55
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	89.54
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	89.28
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	89.1
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	89.1
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	88.86
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	88.86
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	88.47
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.08
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	88.0
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	87.97
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	87.96
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	87.93
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	87.66
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	87.56
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	87.5
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	87.44
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	87.38
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	87.14
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	86.75
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	86.32
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	86.13
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.12
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	85.43
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	85.42
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	85.37
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	85.28
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	85.0
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	84.73
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	84.61
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	84.49
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	84.44
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	84.16
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	83.65
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	83.63
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	83.57
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	83.5
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.5
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	83.43
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	83.38
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	83.24
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	83.14
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	82.77
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	82.64
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	82.49
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	82.33
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	82.15
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	81.84
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	81.81
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	81.62
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	81.5
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	81.33
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	81.2
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	81.04
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	80.83
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	80.82
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	80.69
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	80.35
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	80.06

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.3e-49  Score=382.39  Aligned_cols=239  Identities=23%  Similarity=0.234  Sum_probs=215.9

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ..+|++.||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+                        
T Consensus         3 n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g------------------------   58 (251)
T d2c07a1           3 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG------------------------   58 (251)
T ss_dssp             CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT------------------------
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC------------------------
Confidence            45789999999999999999999999999999999999999999999999997654                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |+++++++++++.++||+||+||||||+....++.+.+.++|+++                     ++
T Consensus        59 ~~~~~~~~Dvt-~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~---------------------~~  116 (251)
T d2c07a1          59 YESSGYAGDVS-KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDV---------------------LR  116 (251)
T ss_dssp             CCEEEEECCTT-CHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HH
T ss_pred             CcEEEEEccCC-CHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhh---------------------he
Confidence            56889999999 999999999999999999999999999998889999999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.++++++|+++|.|++++.|+|||+||.++..+.++..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|+|
T Consensus       117 vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~  196 (251)
T d2c07a1         117 TNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM  196 (251)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred             eeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .....+..........|++|+++|||||++  .+||+++..++++|-
T Consensus       197 ~~~~~~~~~~~~~~~~pl~R~~~pedvA~~--v~fL~S~~s~~itG~  241 (251)
T d2c07a1         197 TDKISEQIKKNIISNIPAGRMGTPEEVANL--ACFLSSDKSGYINGR  241 (251)
T ss_dssp             ---CCHHHHHHHHTTCTTSSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             ccccCHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhCCCcCc
Confidence            877654444444445799999999999976  577889888888873

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.7e-48  Score=377.32  Aligned_cols=237  Identities=21%  Similarity=0.272  Sum_probs=214.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+                       .++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g-----------------------~~~   57 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-----------------------VET   57 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----------------------CCE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC-----------------------CcE
Confidence            689999999999999999999999999999999999999999999988876543                       568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ ++++++++++++.+++|+||+||||||+...+++.+.+.++|+++                     +++|+
T Consensus        58 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~---------------------~~vNl  115 (251)
T d1vl8a_          58 MAFRCDVS-NYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQV---------------------IEVNL  115 (251)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH---------------------HHhhh
Confidence            88999999 999999999999999999999999999988899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccc-cccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAA-NLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~-~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++|+++|+|++++.|+||+++|..+ ..+.++..+|++||+|+.+|+++||.|++++|||||+|+||+|+|+|.+
T Consensus       116 ~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~  195 (251)
T d1vl8a_         116 FGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE  195 (251)
T ss_dssp             HHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH
T ss_pred             hhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH
Confidence            999999999999999999999999999776 4577889999999999999999999999999999999999999999987


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ........  ......|++|+++|||||++.  +||+++..++++|-
T Consensus       196 ~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v--~fL~S~~a~~itG~  240 (251)
T d1vl8a_         196 AVFSDPEKLDYMLKRIPLGRTGVPEDLKGVA--VFLASEEAKYVTGQ  240 (251)
T ss_dssp             HHHTCHHHHHHHHHTCTTSSCBCGGGGHHHH--HHHHSGGGTTCCSC
T ss_pred             hccCCHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHhCchhCCCcCc
Confidence            65433222  222346899999999999874  58899988988874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6e-49  Score=378.80  Aligned_cols=232  Identities=25%  Similarity=0.284  Sum_probs=213.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                           .+..
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---------------------------~~~~   53 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---------------------------ANGK   53 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---------------------------GGEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---------------------------CCCc
Confidence            5789999999999999999999999999999999999999998888763                           3467


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ +.++++++++++.+++|+||+||||||.....++.+.+.++|+++                     +++|+.
T Consensus        54 ~~~~Dv~-~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~---------------------~~vNl~  111 (243)
T d1q7ba_          54 GLMLNVT-DPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDI---------------------IETNLS  111 (243)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEEEec-CHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccc---------------------cceeec
Confidence            8899999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++|+++|+|++++.|+|||+||.++..+.++.++|++||+|+.+|+++||.||+++|||||+|+||+|+|+|....
T Consensus       112 ~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~  191 (243)
T d1q7ba_         112 SVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL  191 (243)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             hhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh
Confidence            99999999999999998999999999999999999999999999999999999999999999999999999999987766


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .+..........|++|+++|||||++  .+||+++..++++|-
T Consensus       192 ~~~~~~~~~~~~pl~R~~~pedvA~~--v~fL~S~~s~~itGq  232 (243)
T d1q7ba_         192 SDDQRAGILAQVPAGRLGGAQEIANA--VAFLASDEAAYITGE  232 (243)
T ss_dssp             CHHHHHHHHTTCTTSSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hhhHHHHHHhcCCCCCCCCHHHHHHH--HHHHhCchhcCCcCC
Confidence            54444444445799999999999986  567888888888873

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.5e-48  Score=376.87  Aligned_cols=238  Identities=24%  Similarity=0.243  Sum_probs=188.0

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      +.|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+                        .
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~------------------------~   57 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG------------------------F   57 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------C
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------C
Confidence            4689999999999999999999999999999999999999999999999998764                        5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhc-CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.++.||++ +.++++++++++.++| |+||+||||||+....++.+.+.++|+++                     ++
T Consensus        58 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~---------------------~~  115 (259)
T d1xq1a_          58 QVTGSVCDAS-LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFH---------------------IS  115 (259)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHH---------------------HH
T ss_pred             ceEEEeccCC-CHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHH---------------------HH
Confidence            6889999999 9999999999999998 78999999999998899999999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++|+++|.|++++.|+||++||..+..+.++..+|++||+|+.+|+++||.|++++|||||+|+||+|+|||
T Consensus       116 vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~  195 (259)
T d1xq1a_         116 TNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL  195 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred             HHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHH
Confidence            99999999999999999999899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         331 FENEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       331 ~~~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ........ ........|++|+++|||||++  .+||+++..++++|-
T Consensus       196 ~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~--v~fL~S~~s~~iTG~  241 (259)
T d1xq1a_         196 AEAVYDDEFKKVVISRKPLGRFGEPEEVSSL--VAFLCMPAASYITGQ  241 (259)
T ss_dssp             ----------------------CCGGGGHHH--HHHHTSGGGTTCCSC
T ss_pred             hhhhchHHHHHHHHhCCCCCCCcCHHHHHHH--HHHHhCchhcCCcCc
Confidence            87654332 2223335699999999999987  457899999998884

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=6.2e-48  Score=375.24  Aligned_cols=235  Identities=23%  Similarity=0.295  Sum_probs=206.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.++                       .++.
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g-----------------------~~~~   58 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-----------------------VKVL   58 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-----------------------SCEE
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC-----------------------CcEE
Confidence            689999999999999999999999999999999997 5678888888866543                       5788


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.++++++++++.++||+||+||||||+....++.+.+.++|+++                     |++|+.
T Consensus        59 ~~~~Dv~-~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~---------------------~~vNl~  116 (260)
T d1x1ta1          59 YDGADLS-KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAI---------------------LALNLS  116 (260)
T ss_dssp             EECCCTT-SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTH
T ss_pred             EEECCCC-CHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhh---------------------hhcccc
Confidence            9999999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++|+++|+|++++.|+||++||.++..+.++..+|++||+|+.+|+++||.|++++|||||+|+||+|+|||++..
T Consensus       117 g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  196 (260)
T d1x1ta1         117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             ccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998754


Q ss_pred             ccCCc------------cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKP------------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~------------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .....            .......|++|+++|||||++  .+|||++..++++|-
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~--v~fL~S~~a~~itG~  249 (260)
T d1x1ta1         197 ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT--AVFLASDAAAQITGT  249 (260)
T ss_dssp             ------------------CHHHHCTTCCCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhChhhCCCcCC
Confidence            32211            112234689999999999987  467889988888873

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=6e-48  Score=375.21  Aligned_cols=237  Identities=21%  Similarity=0.247  Sum_probs=215.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+                        .+
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g------------------------~~   58 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG------------------------FK   58 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CE
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CC
Confidence            478999999999999999999999999999999999999999999999998765                        56


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcC-CccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCG-PVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g-~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      +.++.+|++ |+++++++++++.++++ +||+||||||+....++.+.+.++|+++                     |++
T Consensus        59 ~~~~~~Dv~-~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~---------------------~~v  116 (259)
T d2ae2a_          59 VEASVCDLS-SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLI---------------------MSI  116 (259)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             ceEEEeeCC-CHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHH---------------------Hhc
Confidence            888999999 99999999999999987 7999999999998899999999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+|+++|+++|.|++++.|+||++||..+..+.++...|++||+|+.+|+|+||.||+++|||||+|+||+|+|+|.
T Consensus       117 Nl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  196 (259)
T d2ae2a_         117 NFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV  196 (259)
T ss_dssp             HTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHH
T ss_pred             ccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccccCCcc-----ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         332 ENEEKSKPR-----ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       332 ~~~~~~~~~-----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +........     ......|++|+++|||||++  .+||+++..++++|-
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~--v~fL~S~~s~~itG~  245 (259)
T d2ae2a_         197 EMTIQDPEQKENLNKLIDRCALRRMGEPKELAAM--VAFLCFPAASYVTGQ  245 (259)
T ss_dssp             HHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             HhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhCCCcCc
Confidence            654332111     11124689999999999986  568899988888873

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.7e-48  Score=375.76  Aligned_cols=237  Identities=22%  Similarity=0.298  Sum_probs=212.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+.                      .++.
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~----------------------~~~~   58 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD----------------------AEVL   58 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT----------------------CCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC----------------------CeEE
Confidence            478999999999999999999999999999999999999999999998876543                      5788


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +++||++ |+++++++++++.++||+||+||||||+.. ..++.+.+.++|+++                     |++|+
T Consensus        59 ~~~~Dvt-~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~---------------------~~vNl  116 (258)
T d1iy8a_          59 TTVADVS-DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV---------------------VSINL  116 (258)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHH---------------------HHHHT
T ss_pred             EEeccCC-CHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHH---------------------hhhhc
Confidence            9999999 999999999999999999999999999875 467899999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+|+++|+++|.|++++.|+|||+||.++..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+|||.+.
T Consensus       117 ~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~  196 (258)
T d1iy8a_         117 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN  196 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred             cchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998764


Q ss_pred             cccC----Cc----cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKS----KP----RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~----~~----~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ....    ..    .......|++|+++|||||++  .+||+++..++++|-
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~--v~fL~S~~s~~itG~  246 (258)
T d1iy8a_         197 SMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV--VAFLLSDDASYVNAT  246 (258)
T ss_dssp             HHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHH--HHHHTSGGGTTCCSC
T ss_pred             HHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCCcCc
Confidence            4221    11    111223589999999999976  568889888888873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.6e-48  Score=375.20  Aligned_cols=236  Identities=22%  Similarity=0.299  Sum_probs=213.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+                        .+
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g------------------------~~   61 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG------------------------GQ   61 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CC
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC------------------------Cc
Confidence            467999999999999999999999999999999999999999999999998765                        56


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++++|++ ++++++++++++.+++|+||+||||||+....++ +.+.++|+++                     +++|
T Consensus        62 ~~~~~~Dvs-~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~---------------------~~vN  118 (255)
T d1fmca_          62 AFACRCDIT-SEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRA---------------------YELN  118 (255)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHH---------------------HHHH
T ss_pred             EEEEEccCC-CHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcc-cCCHHHHHHH---------------------HHHH
Confidence            888999999 9999999999999999999999999999877665 7899999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|+++++|.++|+|.+++.|+||++||.++..+.++.++|++||+|+.+|+++||.||+++|||||+|+||+|+|+++.
T Consensus       119 l~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~  198 (255)
T d1fmca_         119 VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK  198 (255)
T ss_dssp             THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred             HHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ...... ........|++|+++|||||++  .+||+++..++++|-
T Consensus       199 ~~~~~e~~~~~~~~~pl~R~g~pedvA~~--v~fL~S~~s~~itG~  242 (255)
T d1fmca_         199 SVITPEIEQKMLQHTPIRRLGQPQDIANA--ALFLCSPAASWVSGQ  242 (255)
T ss_dssp             TTCCHHHHHHHHHTCSSCSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             ccCCHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCCcCC
Confidence            543222 1222334689999999999986  567889988888884

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=6.9e-48  Score=373.58  Aligned_cols=232  Identities=22%  Similarity=0.302  Sum_probs=213.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                           .++.
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~---------------------------~~~~   54 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG---------------------------DAAR   54 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG---------------------------GGEE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------------------------CceE
Confidence            5899999999999999999999999999999999999998887766542                           5678


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++++|++ ++++++++++++.++||+||+||||||+....++.+.+.++|+++                     +++|+.
T Consensus        55 ~~~~Dv~-~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~---------------------~~vN~~  112 (254)
T d1hdca_          55 YQHLDVT-IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKV---------------------VEINLT  112 (254)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHH---------------------HHHHTH
T ss_pred             EEEcccC-CHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchh---------------------hhHHhh
Confidence            9999999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++|+++|.|++++.|+||++||.++..+.++.++|++||+|+.+|+++||.|++++|||||+|+||+|+|+|+.+.
T Consensus       113 ~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~  192 (254)
T d1hdca_         113 GVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET  192 (254)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             ccCCccccccccccCCCC-ChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKPRETSLISQTGGLY-RPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~-~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ............|++|++ +|||||++.  +||+++..++++|-
T Consensus       193 ~~~~~~~~~~~~pl~R~g~~PedvA~~v--~fL~S~~a~~itG~  234 (254)
T d1hdca_         193 GIRQGEGNYPNTPMGRVGNEPGEIAGAV--VKLLSDTSSYVTGA  234 (254)
T ss_dssp             TCCCSTTSCTTSTTSSCB-CHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             CHHHHHHHHhCCCCCCCCCCHHHHHHHH--HHHhchhhCCCCCc
Confidence            655555555567999998 699999874  57889988888884

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.8e-47  Score=369.38  Aligned_cols=233  Identities=25%  Similarity=0.294  Sum_probs=198.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|++.+  ++.+.+++.+                        .++.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g------------------------~~~~   55 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLG------------------------RRVL   55 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTT------------------------CCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcC------------------------CcEE
Confidence            4789999999999999999999999999999999998653  2333444433                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |+++++++++++.++||+||+||||||+....++.+.+.++|+++                     |++|+.
T Consensus        56 ~~~~Dvs-~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~---------------------~~vNl~  113 (247)
T d2ew8a1          56 TVKCDVS-QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKT---------------------FEINVD  113 (247)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEeeCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhh---------------------heeehh
Confidence            9999999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++|+++|.|++++.|+|||+||.++..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+|++.+..
T Consensus       114 ~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~  193 (247)
T d2ew8a1         114 SGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS  193 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------
T ss_pred             hhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             ccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ......  ......+++|+++|||||++  .+||+++..++++|-
T Consensus       194 ~~~~~~~~~~~~~~~l~r~~~pedvA~~--v~fL~S~~s~~itG~  236 (247)
T d2ew8a1         194 ALSAMFDVLPNMLQAIPRLQVPLDLTGA--AAFLASDDASFITGQ  236 (247)
T ss_dssp             ----------CTTSSSCSCCCTHHHHHH--HHHHTSGGGTTCCSC
T ss_pred             ccchhHHHHHHHhccCCCCCCHHHHHHH--HHHHhCchhcCCcCC
Confidence            443322  22334588999999999986  467899888888874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-47  Score=368.49  Aligned_cols=227  Identities=25%  Similarity=0.350  Sum_probs=209.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                           .++.
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------------------------~~~~   55 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---------------------------DAAR   55 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---------------------------GGEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---------------------------Ccce
Confidence            5789999999999999999999999999999999999999988877663                           4577


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++++|++ |+++++++++++.+++|+||+||||||+....++.+.+.++|+++                     |++|+.
T Consensus        56 ~~~~Dv~-~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~---------------------~~vNl~  113 (244)
T d1nffa_          56 YVHLDVT-QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRI---------------------LDVNLT  113 (244)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHH---------------------HHHHTH
T ss_pred             EEEeecC-CHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHH---------------------hhcccc
Confidence            8999999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+|+++|.++|.|++++.|+||++||.++..+.++..+|++||+|+++|+|+||.||+++|||||+|+||+|+|||.+..
T Consensus       114 ~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  193 (244)
T d1nffa_         114 GVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV  193 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS
T ss_pred             hhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .+.     ....|++|+++|||||++.  +||+++..++++|-
T Consensus       194 ~~~-----~~~~pl~R~~~p~diA~~v--~fL~s~~s~~itG~  229 (244)
T d1nffa_         194 PED-----IFQTALGRAAEPVEVSNLV--VYLASDESSYSTGA  229 (244)
T ss_dssp             CTT-----CSCCSSSSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             hHH-----HHhccccCCCCHHHHHHHH--HHHhChhhCCCcCC
Confidence            332     2246899999999999874  57888888888873

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.1e-47  Score=372.94  Aligned_cols=232  Identities=27%  Similarity=0.365  Sum_probs=210.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ||++|||||++|||+++|++|+++|++|++++|++++++++.++|.+.+                        .++.+++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g------------------------~~~~~~~   57 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------------------------VEADGRT   57 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcEEEEE
Confidence            8999999999999999999999999999999999999999999998765                        5688999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |+++++++++++.++||+||+||||||+....++.+.+.++|+++                     |++|+.|++
T Consensus        58 ~Dvs-~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~---------------------~~vNl~g~~  115 (257)
T d2rhca1          58 CDVR-SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDV---------------------VETNLTGVF  115 (257)
T ss_dssp             CCTT-CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHH---------------------HHHHTHHHH
T ss_pred             eecC-CHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHH---------------------HHHHhhhhh
Confidence            9999 999999999999999999999999999998899999999999988                     999999999


Q ss_pred             HHHHHHHHH--HHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         258 HMTKALVEG--MKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       258 ~l~~~~lp~--m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      +++|+++|+  |.+++.|+||++||..+..+.++..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|||..+..
T Consensus       116 ~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  195 (257)
T d2rhca1         116 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR  195 (257)
T ss_dssp             HHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHH
T ss_pred             HHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHH
Confidence            999999997  567777999999999999999999999999999999999999999999999999999999999876542


Q ss_pred             cCC--------c---cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         336 KSK--------P---RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       336 ~~~--------~---~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ...        +   .......|++|+++|||||++  .+|||++..++++|-
T Consensus       196 ~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~--v~fL~S~~s~~itG~  246 (257)
T d2rhca1         196 EHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM--VAYLIGPGAAAVTAQ  246 (257)
T ss_dssp             HHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHH--HHHHTSGGGTTCCSC
T ss_pred             hhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCCcCc
Confidence            211        1   111224689999999999976  568999999998874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.6e-47  Score=370.01  Aligned_cols=235  Identities=21%  Similarity=0.243  Sum_probs=211.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh-hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE-KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.+                        .++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g------------------------~~~   59 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG------------------------GEA   59 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------CEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcC------------------------CcE
Confidence            58999999999999999999999999999999999985 56788888887754                        578


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++++|++ |+++++++++++.+++|+||+||||||+....++.+.+.++|+++                     +++|+
T Consensus        60 ~~~~~Dvt-~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~---------------------~~vNl  117 (261)
T d1geea_          60 IAVKGDVT-VESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKV---------------------IDTNL  117 (261)
T ss_dssp             EEEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHH---------------------HHHhc
Confidence            89999999 999999999999999999999999999998899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCC-eEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRG-CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g-~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++|+++|.|++++.| +||++||.++..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+||+..
T Consensus       118 ~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~  197 (261)
T d1geea_         118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH
T ss_pred             ccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh
Confidence            99999999999999988755 59999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .......  .......|++|+++|||||++  .+||+++..++++|-
T Consensus       198 ~~~~~~~~~~~~~~~~pl~R~~~pediA~~--v~fL~S~~s~~itG~  242 (261)
T d1geea_         198 EKFADPEQRADVESMIPMGYIGEPEEIAAV--AAWLASSEASYVTGI  242 (261)
T ss_dssp             HHHHSHHHHHHHHTTCTTSSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hhcCCHHHHHHHHhcCCCCCCCCHHHHHHH--HHHHhCchhcCCcCC
Confidence            5433222  222334689999999999987  467889988888874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3.5e-47  Score=368.11  Aligned_cols=234  Identities=23%  Similarity=0.307  Sum_probs=210.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...                         .++.
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-------------------------~~~~   57 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-------------------------DQIQ   57 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-------------------------TTEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC-------------------------CcEE
Confidence            478999999999999999999999999999999999999999888877421                         4688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |+++++++++++.++||+||+||||||+...+++.+.+.++|+++                     |++|+.
T Consensus        58 ~~~~Dv~-~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~---------------------~~vnl~  115 (251)
T d1zk4a1          58 FFQHDSS-DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKL---------------------LAVNLD  115 (251)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhh---------------------cccccc
Confidence            8999999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCC-eEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHH--HccCCcEEEEEeCCCCCCCCC
Q psy3252         255 GTIHMTKALVEGMKQRGRG-CIVITASQAANLGIYGLAAYTSSKFALKGFAEALYME--VKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g-~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~E--l~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+++++|+++|.|++++.| +||++||.++..+.++..+|++||+|+.+|+++||.|  ++++|||||+|+||+|+|+|.
T Consensus       116 g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~  195 (251)
T d1zk4a1         116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV  195 (251)
T ss_dssp             HHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHH
T ss_pred             ccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhH
Confidence            9999999999999988765 8999999999999999999999999999999999998  679999999999999999987


Q ss_pred             cccccCCc-cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         332 ENEEKSKP-RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       332 ~~~~~~~~-~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +....... .......|++|+++|||||++  .+||+++..++++|-
T Consensus       196 ~~~~~~~~~~~~~~~~pl~R~~~pedvA~~--v~fL~S~~s~~itG~  240 (251)
T d1zk4a1         196 DDLPGAEEAMSQRTKTPMGHIGEPNDIAYI--CVYLASNESKFATGS  240 (251)
T ss_dssp             HTSTTHHHHHTSTTTCTTSSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             HhcCCHHHHHHHHhCCCCCCCcCHHHHHHH--HHHHhCchhCCCcCc
Confidence            76543222 122234689999999999987  467889988888873

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.5e-47  Score=367.68  Aligned_cols=231  Identities=24%  Similarity=0.278  Sum_probs=210.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ++||||||++|||+++|++|+++|++|++. .|+++.++++.+++.+.+                        .++.+++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g------------------------~~~~~~~   57 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG------------------------GQAITFG   57 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT------------------------CEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC------------------------CcEEEEe
Confidence            589999999999999999999999999986 567888899998888765                        5788999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.++++++++++.+++|+||+||||||.....++.+.+.++|+++                     +++|+.|++
T Consensus        58 ~Dv~-~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~---------------------~~vNl~~~~  115 (244)
T d1edoa_          58 GDVS-KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEV---------------------IDLNLTGVF  115 (244)
T ss_dssp             CCTT-SHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHTHHHH
T ss_pred             CCCC-CHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHH---------------------HhhhhhhHH
Confidence            9999 999999999999999999999999999998899999999999988                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      +++|+++|+|++++.|+|||+||.++..+.++.++|++||+|+.+|+++||.||+++|||||+|+||+|+|+|.++..+.
T Consensus       116 ~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~  195 (244)
T d1edoa_         116 LCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED  195 (244)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH
T ss_pred             HHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988766544


Q ss_pred             CccccccccccCCCCChHHhhhccceeeec-CCCCCCCCCc
Q psy3252         338 KPRETSLISQTGGLYRPEVVKQSGLTITLC-LPPDTDTPGF  377 (475)
Q Consensus       338 ~~~~~~~~~~~~~~~~pe~va~~~~~~~~~-~~~~~~~~g~  377 (475)
                      .........|++|+++|||||++.  +||+ ++..++++|-
T Consensus       196 ~~~~~~~~~pl~R~~~p~dvA~~v--~fLa~S~~a~~itG~  234 (244)
T d1edoa_         196 MEKKILGTIPLGRTGQPENVAGLV--EFLALSPAASYITGQ  234 (244)
T ss_dssp             HHHHHHTSCTTCSCBCHHHHHHHH--HHHHHCSGGGGCCSC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHH--HHHHCCchhcCCcCC
Confidence            444444457899999999999875  4675 7888888773

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=3.1e-47  Score=370.34  Aligned_cols=235  Identities=18%  Similarity=0.210  Sum_probs=211.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.+                        .++.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g------------------------~~~~   57 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG------------------------VEAR   57 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------------------------SCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcEE
Confidence            4789999999999999999999999999999999999999999999987654                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.||++ |+++++++++++.++||+||+||||||+... .++.+.+.++|+++                     +++|+
T Consensus        58 ~~~~Dv~-~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~---------------------~~vnl  115 (260)
T d1zema1          58 SYVCDVT-SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARV---------------------LTINV  115 (260)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhh---------------------ccccc
Confidence            9999999 9999999999999999999999999998754 78999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .++++++++++|.|.+++.|+||++||.++..+.+++.+|++||+|+.+|+++||.||+++|||||+|+||+|+|+++.+
T Consensus       116 ~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~  195 (260)
T d1zema1         116 TGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  195 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             cccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997643


Q ss_pred             ccc------------CCcc----ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEK------------SKPR----ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~------------~~~~----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ...            ..+.    ......|++|+++|||||++  .+||+++..++++|-
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~--v~fL~S~~s~~itG~  253 (260)
T d1zema1         196 RQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGV--VAFLLGDDSSFMTGV  253 (260)
T ss_dssp             HHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHH--HHHHHSGGGTTCCSC
T ss_pred             cchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCccCC
Confidence            211            1111    11124589999999999986  568899988988874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.7e-47  Score=364.21  Aligned_cols=230  Identities=23%  Similarity=0.310  Sum_probs=207.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++                             +.
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----------------------------~~   51 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----------------------------GA   51 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----------------------------TC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----------------------------CC
Confidence            4689999999999999999999999999999999999999888776543                             24


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +++.||++ |+++++++++++.+++|+||+||||||+....++.+.+.++|+++                     +++|+
T Consensus        52 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~---------------------~~vNl  109 (242)
T d1ulsa_          52 HPVVMDVA-DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELV---------------------LRVNL  109 (242)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHH
T ss_pred             eEEEEecC-CHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhcc---------------------ccccc
Confidence            57899999 999999999999999999999999999998899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++|+++|.|.+++.+.|+++||. +..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+|++...
T Consensus       110 ~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~  188 (242)
T d1ulsa_         110 TGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK  188 (242)
T ss_dssp             HHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred             hhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc
Confidence            9999999999999999888888888774 677899999999999999999999999999999999999999999999887


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ..+..........|++|+++|||||++  .+||+++..++++|-
T Consensus       189 ~~~~~~~~~~~~~pl~R~~~pedia~~--v~fL~S~~s~~itG~  230 (242)
T d1ulsa_         189 VPEKVREKAIAATPLGRAGKPLEVAYA--ALFLLSDESSFITGQ  230 (242)
T ss_dssp             SCHHHHHHHHHTCTTCSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             CCHHHHHHHHhcCCCCCCCCHHHHHHH--HHHHhchhhCCCCCc
Confidence            655444444456799999999999986  467899988888874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.6e-47  Score=366.00  Aligned_cols=229  Identities=22%  Similarity=0.261  Sum_probs=202.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++..+ +.+++                             ...
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----------------------------~~~   51 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----------------------------GGA   51 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----------------------------TCE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----------------------------CCe
Confidence            378999999999999999999999999999999999987543 33322                             134


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++++|++ |.++++++++++.++||+||+||||||+....++.+.+.++|+++                     |++|+.
T Consensus        52 ~~~~Dv~-~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~---------------------~~vNl~  109 (248)
T d2d1ya1          52 FFQVDLE-DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRV---------------------LEVNLT  109 (248)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEEeCC-CHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHH---------------------HHhhhh
Confidence            6899999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++|+++|+|++++.|+||++||.++..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+||+..+.
T Consensus       110 g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~  189 (248)
T d2d1ya1         110 APMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEA  189 (248)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             hHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987643


Q ss_pred             ccCC------ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSK------PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~------~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ....      ........|++|+++||||+++  .+||+++..++++|-
T Consensus       190 ~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~--v~fL~S~~s~~itG~  236 (248)
T d2d1ya1         190 IALSPDPERTRRDWEDLHALRRLGKPEEVAEA--VLFLASEKASFITGA  236 (248)
T ss_dssp             HC--------CHHHHTTSTTSSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCCCCc
Confidence            2211      1222234689999999999986  458889888888873

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=6e-47  Score=367.48  Aligned_cols=233  Identities=22%  Similarity=0.289  Sum_probs=208.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |.|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           .++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~---------------------------~~~   53 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG---------------------------PAA   53 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC---------------------------TTE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------------------------Cce
Confidence            45899999999999999999999999999999999999999988887762                           457


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ ++++++++++++.+++|+||+||||||+....++.+.+.++|+++                     +++|+
T Consensus        54 ~~~~~Dvt-~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~---------------------~~vNl  111 (256)
T d1k2wa_          54 CAIALDVT-DQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRL---------------------FAINV  111 (256)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEeeCC-CHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhh---------------------hceee
Confidence            88999999 999999999999999999999999999998899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhC-CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQR-GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++|+++|.|.++ +.|+||++||.++..+.++.++|++||+|+.+|+++||.||+++|||||+|+||+|+|++++
T Consensus       112 ~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~  191 (256)
T d1k2wa_         112 SGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWD  191 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHH
T ss_pred             eccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhh
Confidence            99999999999987654 46999999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCC--------c---cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSK--------P---RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~--------~---~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ......        .   .......|++|+++|||||.+  .+||+++..++++|-
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~--v~fL~S~~a~~iTG~  245 (256)
T d1k2wa_         192 GVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGM--AIFLATPEADYIVAQ  245 (256)
T ss_dssp             HHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHH--HHHTTSGGGTTCCSC
T ss_pred             hhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhCCccCc
Confidence            433211        1   111223589999999999987  467899998888874

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=9.7e-47  Score=365.80  Aligned_cols=231  Identities=29%  Similarity=0.378  Sum_probs=208.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+                        .++.++.|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g------------------------~~~~~~~~   57 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG------------------------GHAVAVKV   57 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCEEEEEC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcEEEEEe
Confidence            789999999999999999999999999999999999999999998765                        56889999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |+++++++++++.++||+||+||||||+....++.+.+.++|+++                     +++|+.|+++
T Consensus        58 Dv~-~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~---------------------~~vNl~g~~~  115 (255)
T d1gega_          58 DVS-DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKV---------------------YNINVKGVIW  115 (255)
T ss_dssp             CTT-SHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHTHHHHH
T ss_pred             eCC-CHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhh---------------------hhhcccchhh
Confidence            999 999999999999999999999999999998899999999999988                     9999999999


Q ss_pred             HHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccC
Q psy3252         259 MTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKS  337 (475)
Q Consensus       259 l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~  337 (475)
                      ++|+++|.|.+++ .|+||++||.++..+.++.+.|++||+|+.+|+++||.||+++|||||+|+||+|+|||+......
T Consensus       116 ~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~  195 (255)
T d1gega_         116 GIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQ  195 (255)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHH
T ss_pred             hhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhh
Confidence            9999999887665 578999999999999999999999999999999999999999999999999999999987644321


Q ss_pred             Cc-----------cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         338 KP-----------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       338 ~~-----------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ..           .......|++|+++|||||++  .+||+++..++++|-
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~--v~fL~S~~a~~itG~  244 (255)
T d1gega_         196 VSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAAC--VSYLASPDSDYMTGQ  244 (255)
T ss_dssp             HHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhCCccCc
Confidence            11           111224589999999999987  468899988998874

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.8e-47  Score=363.50  Aligned_cols=224  Identities=22%  Similarity=0.284  Sum_probs=195.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+                                   .++.
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------------------------------~~~~   48 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------------------------------KGLF   48 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------------------------------TTSE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------------------------------cCce
Confidence            57899999999999999999999999999999999986532                                   2356


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      .+++|++ |.++++++++++.+++|+||+||||||+....++.+.+.++|+++                     +++|+.
T Consensus        49 ~~~~Dv~-~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~---------------------~~vNl~  106 (237)
T d1uzma1          49 GVEVDVT-DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKV---------------------INANLT  106 (237)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEEecC-CHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHH---------------------HHhhhh
Confidence            7899999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      ++++++|.++|.|++++.|+|||+||.++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+..
T Consensus       107 ~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~  186 (237)
T d1uzma1         107 GAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL  186 (237)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS
T ss_pred             hhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987765


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .+..........|++|+++|||||++  .+||+++..++++|-
T Consensus       187 ~~~~~~~~~~~~pl~R~~~pedvA~~--v~fL~S~~s~~itG~  227 (237)
T d1uzma1         187 DERIQQGALQFIPAKRVGTPAEVAGV--VSFLASEDASYISGA  227 (237)
T ss_dssp             CHHHHHHHGGGCTTCSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCCcCC
Confidence            44444444456799999999999986  567889988888873

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-46  Score=363.18  Aligned_cols=229  Identities=22%  Similarity=0.325  Sum_probs=201.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++                            ..+.
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----------------------------~~~~   54 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----------------------------PGAV   54 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------------------------TTEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----------------------------CCCe
Confidence            578999999999999999999999999999999999999888776553                            3367


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      ++.||++ |.++++++++++.++||+||+||||||+.. ..++.+.+.++|+++                     +++|+
T Consensus        55 ~~~~Dvs-~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~---------------------~~vNl  112 (250)
T d1ydea1          55 FILCDVT-QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQL---------------------LELNL  112 (250)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEccCC-CHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHH---------------------HHHhh
Confidence            8999999 999999999999999999999999999764 467889999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++|+++|+|+++ +|+||++||.++..+.++..+|++||+|+.+|+++||.|++++|||||+|+||+|+|||+++
T Consensus       113 ~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~  191 (250)
T d1ydea1         113 LGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE  191 (250)
T ss_dssp             HHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             hhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHH
Confidence            99999999999999875 49999999999999999999999999999999999999999999999999999999998765


Q ss_pred             cccCCccc------cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKSKPRE------TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~~~~~------~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .....+..      .....|++|+++|||||++.  +||+++ .++++|-
T Consensus       192 ~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v--~fL~Sd-a~~itG~  238 (250)
T d1ydea1         192 LAALMPDPRASIREGMLAQPLGRMGQPAEVGAAA--VFLASE-ANFCTGI  238 (250)
T ss_dssp             HHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHH--HHHHHH-CTTCCSC
T ss_pred             HhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHH--HHHhCc-cCCCcCC
Confidence            43332211      11235899999999999875  456775 5677773

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.3e-45  Score=360.33  Aligned_cols=234  Identities=22%  Similarity=0.326  Sum_probs=207.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...                         ..+.
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-------------------------~~~~   57 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-------------------------DVIS   57 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-------------------------TTEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-------------------------CceE
Confidence            588999999999999999999999999999999999999999998887542                         4477


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCC--CcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG--TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      ++.||++ |+++++++++++.++||+||+||||||+....  .+.+.+.++|+.+                     +++|
T Consensus        58 ~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~---------------------~~vN  115 (268)
T d2bgka1          58 FVHCDVT-KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRV---------------------MDIN  115 (268)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHH---------------------HHHH
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHH---------------------HHHh
Confidence            8999999 99999999999999999999999999987543  5778899999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC-hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL-AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~-~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      +.|+++++|+++|+|++++.|+||++||..+..+.++. ..|++||+|+.+|+++||.||+++|||||+|+||+|+|||.
T Consensus       116 l~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  195 (268)
T d2bgka1         116 VYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLL  195 (268)
T ss_dssp             THHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCC
T ss_pred             hcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHH
Confidence            99999999999999999999999999999998877665 58999999999999999999999999999999999999998


Q ss_pred             cccccCCccc-----cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         332 ENEEKSKPRE-----TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       332 ~~~~~~~~~~-----~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .+........     .....+++|+++|||||++  .+||+++..++++|-
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~--v~fL~S~~s~~itGq  244 (268)
T d2bgka1         196 TDVFGVDSSRVEELAHQAANLKGTLLRAEDVADA--VAYLAGDESKYVSGL  244 (268)
T ss_dssp             TTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHH--HHHHhChhhCCccCc
Confidence            7665433222     1123477999999999987  567888888888874

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=356.04  Aligned_cols=234  Identities=26%  Similarity=0.315  Sum_probs=210.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+++||++||||||+|||+++|++|+++|++|++++|+.++++++.+++.+.+                        .++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~------------------------~~~   58 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG------------------------AKV   58 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcE
Confidence            46899999999999999999999999999999999999999999999998765                        568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +++.||++ |.++++++++++.+++|++|+||||||+.....+.+.+.++++++                     +++|+
T Consensus        59 ~~~~~Dvs-~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~---------------------~~vN~  116 (244)
T d1yb1a_          59 HTFVVDCS-NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKT---------------------FEVNV  116 (244)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHH---------------------HHHHT
T ss_pred             EEEEeeCC-CHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhh---------------------cceee
Confidence            89999999 999999999999999999999999999998888999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc---CCcEEEEEeCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ---SGLTITLCLPPDTDTPG  330 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~---~gIrVn~V~PG~v~T~~  330 (475)
                      .|+++++++++|.|.+++.|+||++||.++..+.+++++|++||+|+.+|+++|+.||++   .||+||+|+||+|+|+|
T Consensus       117 ~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~  196 (244)
T d1yb1a_         117 LAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  196 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             eccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChh
Confidence            999999999999999999999999999999999999999999999999999999999987   58999999999999997


Q ss_pred             CcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHH
Q psy3252         331 FENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLED  410 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~a  410 (475)
                      .++...                                                        .....++||+||+.++.+
T Consensus       197 ~~~~~~--------------------------------------------------------~~~~~~~pe~va~~i~~~  220 (244)
T d1yb1a_         197 IKNPST--------------------------------------------------------SLGPTLEPEEVVNRLMHG  220 (244)
T ss_dssp             TTCTHH--------------------------------------------------------HHCCCCCHHHHHHHHHHH
T ss_pred             hhCcCc--------------------------------------------------------cccCCCCHHHHHHHHHHH
Confidence            653210                                                        011257899999999999


Q ss_pred             HhcCCeeEEeCchhHHHHH
Q psy3252         411 ALKGNYFSTVGLESYLITT  429 (475)
Q Consensus       411 i~~g~~~~~~~~~~~~~~~  429 (475)
                      +.+++..++++....++..
T Consensus       221 ~~~~~~~i~~p~~~~~l~~  239 (244)
T d1yb1a_         221 ILTEQKMIFIPSSIAFLTT  239 (244)
T ss_dssp             HHTTCSEEEECCCCCHHHH
T ss_pred             HhcCCcEEEehHHHHHHHH
Confidence            9998887777665555444

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=6.1e-45  Score=349.99  Aligned_cols=190  Identities=28%  Similarity=0.426  Sum_probs=181.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCE-------EEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAH-------VTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~-------Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ++|||||||+|||+++|++|+++|++       |++++|+.++++++.+++.+.+                        .
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g------------------------~   57 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG------------------------A   57 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT------------------------C
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcC------------------------C
Confidence            46899999999999999999999997       9999999999999999998765                        5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.||++ |.++++++++++.++||+||+||||||+....++.+.+.++|+++                     |++
T Consensus        58 ~~~~~~~Dvt-~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~---------------------~~v  115 (240)
T d2bd0a1          58 LTDTITADIS-DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYT---------------------MNT  115 (240)
T ss_dssp             EEEEEECCTT-SHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             cEEEEEecCC-CHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhc---------------------CCE
Confidence            7889999999 999999999999999999999999999999999999999999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      |+.|+++++|+++|+|++++.|+||++||.++..+.|+.+.|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|+
T Consensus       116 Nl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~  195 (240)
T d2bd0a1         116 NLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW  195 (240)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT
T ss_pred             eehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchh
Confidence            99999999999999999998999999999999999999999999999999999999999999999999999999999987


Q ss_pred             ccc
Q psy3252         332 ENE  334 (475)
Q Consensus       332 ~~~  334 (475)
                      ...
T Consensus       196 ~~~  198 (240)
T d2bd0a1         196 GKV  198 (240)
T ss_dssp             CCC
T ss_pred             hhc
Confidence            643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=6.4e-46  Score=359.63  Aligned_cols=231  Identities=23%  Similarity=0.280  Sum_probs=205.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                           .+..
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~---------------------------~~~~   55 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG---------------------------ERSM   55 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---------------------------TTEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---------------------------CCeE
Confidence            4789999999999999999999999999999999999999998887763                           4567


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++++|++ +.++++++++++.+++|++|+||||||+....++.+.+.++|+++                     |++|+.
T Consensus        56 ~~~~Dv~-~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~---------------------~~vNl~  113 (253)
T d1hxha_          56 FVRHDVS-SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRL---------------------LKINTE  113 (253)
T ss_dssp             EECCCTT-CHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHH---------------------HHHHTH
T ss_pred             EEEeecC-CHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHH---------------------HHHhhh
Confidence            8999999 999999999999999999999999999998889999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc--CCcEEEEEeCCCCCCCCCc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ--SGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~--~gIrVn~V~PG~v~T~~~~  332 (475)
                      |+|+++|+++|+|+++ +|+|||+||.++..+.++..+|++||+|+.+|+++||.|+++  +|||||+|+||+|+|++++
T Consensus       114 ~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~  192 (253)
T d1hxha_         114 SVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ  192 (253)
T ss_dssp             HHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH
T ss_pred             HHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHH
Confidence            9999999999999765 599999999999999999999999999999999999999987  5699999999999999876


Q ss_pred             ccccCCcc-----ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPR-----ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~-----~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ...+....     ......++||+++|||||++.  +||+++..++++|-
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v--~fL~S~~s~~itG~  240 (253)
T d1hxha_         193 ASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV--LFLASDESSVMSGS  240 (253)
T ss_dssp             HHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             hhCcchhhHHHHHhCccccccCCCCCHHHHHHHH--HHHhChhhCCCcCc
Confidence            44332211     111235789999999999874  57899988998874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=6.6e-45  Score=353.44  Aligned_cols=236  Identities=23%  Similarity=0.298  Sum_probs=207.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++.+.+                        ..+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~------------------------~~~   57 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG------------------------LNV   57 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CCc
Confidence            78999999999999999999999999999999999999999999999988765                        567


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhc-CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +++.+|++ +.++++++++++.+++ +.+|+||||||.....++.+.+.++|+++                     +++|
T Consensus        58 ~~~~~D~s-~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~---------------------~~~n  115 (258)
T d1ae1a_          58 EGSVCDLL-SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNII---------------------MGTN  115 (258)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHHH
T ss_pred             eEEEeecC-CHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhh---------------------hhhc
Confidence            88999999 9999999999999999 68999999999999899999999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.++++++++++|.|.+++.|+||++||.++..+.++...|+++|+|+++|++.||.||+++|||||+|+||+|+|||..
T Consensus       116 l~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~  195 (258)
T d1ae1a_         116 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVE  195 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred             cccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             ccccCCccc------cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPRE------TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~~------~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .........      .....|++|++.|||||.+  .+||+++..++++|-
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~--v~fL~S~~s~~itG~  244 (258)
T d1ae1a_         196 TAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSAL--IAFLCFPAASYITGQ  244 (258)
T ss_dssp             --------CHHHHHHHHHHSTTCSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhChhhCCCcCc
Confidence            654432221      1223589999999999986  566888888888873

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=2.5e-45  Score=356.81  Aligned_cols=237  Identities=23%  Similarity=0.314  Sum_probs=210.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+                       .++
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g-----------------------~~~   61 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-----------------------VKT   61 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT-----------------------CCE
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC-----------------------Cce
Confidence            689999999999999999999999999999999999999999998888866543                       568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.||++ ++++++++++++.+++|+||+||||||+....++.+.+.++|+++                     +++|+
T Consensus        62 ~~~~~Dv~-~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~---------------------~~~N~  119 (260)
T d1h5qa_          62 KAYQCDVS-NTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFV---------------------YDVNV  119 (260)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEEccCC-CHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhcccccccc---------------------ccccc
Confidence            89999999 999999999999999999999999999998899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHh-CCCCeEEEeccccccc-------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         254 YGTIHMTKALVEGMKQ-RGRGCIVITASQAANL-------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~-~~~g~IV~iSS~a~~~-------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                      .|+++++++++|.|.+ ...|+|++++|.....       +.++..+|++||+|+.+|+++||.||+++|||||+|+||+
T Consensus       120 ~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~  199 (260)
T d1h5qa_         120 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGY  199 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             cchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCc
Confidence            9999999999999865 4567888888876653       3467889999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         326 TDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       326 v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      |+|++.....+..........|++|+++|||||++  .+||+++..++++|-
T Consensus       200 i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~--v~fL~S~~s~~itG~  249 (260)
T d1h5qa_         200 VNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQ--AILLLSDHATYMTGG  249 (260)
T ss_dssp             BCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHH--HHHHHSGGGTTCCSC
T ss_pred             ccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhcchhCCCcCc
Confidence            99998876654443444446799999999999987  467889988888874

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.4e-45  Score=356.60  Aligned_cols=237  Identities=21%  Similarity=0.242  Sum_probs=193.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+...                     .++.
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~---------------------~~~~   60 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSE---------------------QNVN   60 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCG---------------------GGEE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc---------------------CceE
Confidence            4789999999999999999999999999999999999999999999998765321                     5689


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.+|++ +.++++++++++.++||+||+||||||+..+    ..+.+.+.++|+.+                     |+
T Consensus        61 ~~~~Dvt-~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~---------------------~~  118 (264)
T d1spxa_          61 SVVADVT-TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDAT---------------------LN  118 (264)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHH---------------------HH
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHH---------------------HH
Confidence            9999999 9999999999999999999999999998643    34556788999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccc-cccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQ-AANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~-a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.|+++++|+++|+|++++ |+||+++|. ++..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+|+
T Consensus       119 vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~  197 (264)
T d1spxa_         119 LNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG  197 (264)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred             HhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence            999999999999999998765 666666655 467899999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCccc---------cccccccCCCCChHHhhhccceeeecCC-CCCCCCCc
Q psy3252         330 GFENEEKSKPRE---------TSLISQTGGLYRPEVVKQSGLTITLCLP-PDTDTPGF  377 (475)
Q Consensus       330 ~~~~~~~~~~~~---------~~~~~~~~~~~~pe~va~~~~~~~~~~~-~~~~~~g~  377 (475)
                      |...........         .....|++|+++|||||++.  +||++. ..++++|-
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v--~fL~S~~~s~~itG~  253 (264)
T d1spxa_         198 FGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI--AFLADRKTSSYIIGH  253 (264)
T ss_dssp             C--------------HHHHHHHHHHCTTSSCBCHHHHHHHH--HHHHCHHHHTTCCSC
T ss_pred             chhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCCcccCCccCc
Confidence            877543222111         12235899999999999874  578874 46777763

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.2e-45  Score=358.76  Aligned_cols=238  Identities=21%  Similarity=0.266  Sum_probs=208.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+...                     .++.
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~---------------------~~~~   59 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPA---------------------EKIN   59 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCG---------------------GGEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCC---------------------cceE
Confidence            4789999999999999999999999999999999999999999999998765321                     4689


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCC--CcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCG--TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      ++.+|++ +.++++++++++.++||+||+||||||.....  ...+.+.++|+++                     +++|
T Consensus        60 ~~~~Dv~-~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~---------------------~~vN  117 (274)
T d1xhla_          60 AVVADVT-EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKT---------------------FKLN  117 (274)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHH---------------------HHHH
T ss_pred             EEEeeCC-CHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHH---------------------Hhhc
Confidence            9999999 99999999999999999999999999986443  4566788999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      +.|+|+++|+++|.|++++.|+|+++||.++..+.+++++|++||+|+.+|+++||.||+++|||||+|+||+|+||+..
T Consensus       118 l~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~  197 (274)
T d1xhla_         118 FQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMG  197 (274)
T ss_dssp             THHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHH
T ss_pred             ccccccccccccccccccccccccchhhhhccccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhh
Confidence            99999999999999999988999999999999999999999999999999999999999999999999999999999866


Q ss_pred             ccccCCcc---------ccccccccCCCCChHHhhhccceeeecCC-CCCCCCCc
Q psy3252         333 NEEKSKPR---------ETSLISQTGGLYRPEVVKQSGLTITLCLP-PDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~---------~~~~~~~~~~~~~pe~va~~~~~~~~~~~-~~~~~~g~  377 (475)
                      ........         ......|++|+++|||||++.  +||+++ ..++++|-
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v--~fL~S~d~s~~itG~  250 (274)
T d1xhla_         198 AMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANII--VFLADRNLSSYIIGQ  250 (274)
T ss_dssp             HTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH--HHHHCHHHHTTCCSC
T ss_pred             hhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHH--HHHcCCccccCccCc
Confidence            54322111         112235899999999999864  678885 46777773

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.9e-45  Score=358.63  Aligned_cols=237  Identities=21%  Similarity=0.249  Sum_probs=201.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+..                     ..++.
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~---------------------~~~~~   60 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS---------------------EKQVN   60 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC---------------------GGGEE
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---------------------CCceE
Confidence            478999999999999999999999999999999999999999999999875421                     15689


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCc----ccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL----EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      ++.||++ +.++++++++++.++||+||+||||||+....++    .+.+.++|+++                     ++
T Consensus        61 ~~~~Dvs-~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~---------------------~~  118 (272)
T d1xkqa_          61 SVVADVT-TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT---------------------LK  118 (272)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHH---------------------HH
T ss_pred             EEEccCC-CHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHH---------------------HH
Confidence            9999999 9999999999999999999999999999866544    45677788887                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      +|+.|+++++|+++|.|++++.+.|+++||.++..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+|+|
T Consensus       119 vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  198 (272)
T d1xkqa_         119 LNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  198 (272)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             hhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchh
Confidence            99999999999999999986544444455567888999999999999999999999999999999999999999999998


Q ss_pred             CcccccCCcc---------ccccccccCCCCChHHhhhccceeeecCCC-CCCCCC
Q psy3252         331 FENEEKSKPR---------ETSLISQTGGLYRPEVVKQSGLTITLCLPP-DTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~~---------~~~~~~~~~~~~~pe~va~~~~~~~~~~~~-~~~~~g  376 (475)
                      ..........         ......|++|+++|||||++.  +||+++. ..+++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v--~fL~S~~as~~iTG  252 (272)
T d1xkqa_         199 TNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANII--LFLADRNLSFYILG  252 (272)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHH--HHHHCHHHHTTCCS
T ss_pred             hhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHH--HHHhCcchhCCccC
Confidence            7654322211         112345899999999999874  5778765 456776

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.7e-45  Score=351.93  Aligned_cols=228  Identities=24%  Similarity=0.254  Sum_probs=199.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++                            ..+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----------------------------~~~   52 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----------------------------PGI   52 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----------------------------TTC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----------------------------CCC
Confidence            4789999999999999999999999999999999999999888776654                            235


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++++++    +++|+||+||||||+....++.+.+.++|+.+                     +++|+
T Consensus        53 ~~~~~Dv~-~~~~v~~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~---------------------~~vnl  106 (242)
T d1cyda_          53 EPVCVDLG-DWDATEKAL----GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRS---------------------FSVNL  106 (242)
T ss_dssp             EEEECCTT-CHHHHHHHH----TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             eEEEEeCC-CHHHHHHHH----HHcCCCeEEEECCccccchhHHHHHHHHHHHH---------------------HHHHh
Confidence            67899999 988876654    56899999999999998899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHh-CCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQ-RGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~-~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .|+++++|.++|.|.+ +..|+||++||.++..+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|++..
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~  186 (242)
T d1cyda_         107 RSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK  186 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred             ccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHH
Confidence            9999999999998665 456899999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ........  ......|++|+++||||+++  .+||+++..++++|-
T Consensus       187 ~~~~~~~~~~~~~~~~pl~R~~~peeva~~--v~fL~S~~s~~itG~  231 (242)
T d1cyda_         187 KVSADPEFARKLKERHPLRKFAEVEDVVNS--ILFLLSDRSASTSGG  231 (242)
T ss_dssp             HHTCCHHHHHHHHHHSTTSSCBCHHHHHHH--HHHHHSGGGTTCCSS
T ss_pred             hhcCCHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCcCCc
Confidence            55433221  22234689999999999986  467889888888873

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-45  Score=352.21  Aligned_cols=238  Identities=23%  Similarity=0.211  Sum_probs=211.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      |-+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+..                      .+
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~----------------------~~   62 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP----------------------GT   62 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS----------------------SE
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----------------------ce
Confidence            44589999999999999999999999999999999999999999999999987642                      57


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.+++||++ ++++++++++++.++||+||+||||||.....++.+.+.++|+..                     +++|
T Consensus        63 ~~~~~~Dls-~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~---------------------~~~n  120 (257)
T d1xg5a_          63 LIPYRCDLS-NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDM---------------------FNVN  120 (257)
T ss_dssp             EEEEECCTT-CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHH---------------------HHHH
T ss_pred             EEEEEccCC-CHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhh---------------------hhhh
Confidence            899999999 999999999999999999999999999998899999999999988                     9999


Q ss_pred             HHHHHHHHHHHHHHHHhCC--CCeEEEecccccccc--CCCChhhHHHHHHHHHHHHHHHHHH--ccCCcEEEEEeCCCC
Q psy3252         253 LYGTIHMTKALVEGMKQRG--RGCIVITASQAANLG--IYGLAAYTSSKFALKGFAEALYMEV--KQSGLTITLCLPPDT  326 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~~~--~~~~~~Y~aSKaAl~~l~~sLa~El--~~~gIrVn~V~PG~v  326 (475)
                      +.++|+++++++|.|++++  .|+||++||.++...  .++...|++||+|+.+|+++|+.||  +++||+||+|+||.+
T Consensus       121 l~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i  200 (257)
T d1xg5a_         121 VLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV  200 (257)
T ss_dssp             THHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCB
T ss_pred             hhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCC
Confidence            9999999999999998765  699999999998754  4556789999999999999999999  789999999999999


Q ss_pred             CCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         327 DTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       327 ~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      +|++................+++|+++|||||++.+  ||++++.++++|
T Consensus       201 ~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~--fL~s~~a~~itG  248 (257)
T d1xg5a_         201 ETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVI--YVLSTPAHIQIG  248 (257)
T ss_dssp             CSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHH--HHHHSCTTEEEE
T ss_pred             CChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHH--HHhCChhcCeEC
Confidence            999887766555555555678999999999999855  677888877776

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-45  Score=350.67  Aligned_cols=228  Identities=25%  Similarity=0.266  Sum_probs=200.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                            .+
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----------------------------~~   54 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----------------------------GI   54 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----------------------------TC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----------------------------CC
Confidence            46899999999999999999999999999999999999999888776542                            25


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+++++++    +++|+||+||||||+....++.+.+.++|+++                     +++|+
T Consensus        55 ~~~~~Dv~-d~~~v~~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~---------------------~~vnl  108 (244)
T d1pr9a_          55 EPVCVDLG-DWEATERAL----GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRS---------------------FEVNL  108 (244)
T ss_dssp             EEEECCTT-CHHHHHHHH----TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             eEEEEeCC-CHHHHHHHH----HHhCCceEEEeccccccccchhhhhHHHHHHH---------------------HHHhh
Confidence            67899999 988877655    56899999999999998899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHH-hCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMK-QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~-~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .++++++++++|.|. +++.|+||++||.++..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+|++.+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~  188 (244)
T d1pr9a_         109 RAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH
T ss_pred             hhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHh
Confidence            999999999999765 4567999999999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .........  .....|++|+++|||||++.  +||+++..++++|-
T Consensus       189 ~~~~~~~~~~~~~~~~pl~R~~~peevA~~v--~fL~S~~a~~itG~  233 (244)
T d1pr9a_         189 ATWSDPHKAKTMLNRIPLGKFAEVEHVVNAI--LFLLSDRSGMTTGS  233 (244)
T ss_dssp             TTSCSHHHHHHHHTTCTTCSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             hhccChHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhCchhCCcCCc
Confidence            554332222  22345899999999999874  67889988888873

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-44  Score=355.99  Aligned_cols=240  Identities=21%  Similarity=0.237  Sum_probs=212.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      -.|+||++|||||++|||+++|++|+++|++|++++|+.++++++.++|.+.....                   ...++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~-------------------~~~~~   68 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPT-------------------KQARV   68 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTT-------------------CCCCE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccc-------------------cCceE
Confidence            34889999999999999999999999999999999999999999999998754321                   12678


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.||++ |.++++++++++.+++|+||+||||||+....++.+.+.++|+++                     +++|+
T Consensus        69 ~~~~~Dvs-~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~---------------------~~vNl  126 (297)
T d1yxma1          69 IPIQCNIR-NEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV---------------------LETNL  126 (297)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             EEEeccCC-CHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhh---------------------hcccc
Confidence            99999999 999999999999999999999999999998899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      .|+++++|+++|.|.+++.|+||++|| ++..+.++...|++||+|+.+|+++||.||+++|||||+|+||+|+|++..+
T Consensus       127 ~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~  205 (297)
T d1yxma1         127 TGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVE  205 (297)
T ss_dssp             HHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGT
T ss_pred             cchhhHHHHHHHhhccccccccccccc-cccccccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhh
Confidence            999999999999999998999999866 4566789999999999999999999999999999999999999999998764


Q ss_pred             cccCCc----cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKSKP----RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~~~----~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ......    .......|++|+++|||||.+  .+|||++..++++|-
T Consensus       206 ~~~~~~~~~~~~~~~~~plgR~g~pedvA~~--v~fL~Sd~s~~iTG~  251 (297)
T d1yxma1         206 NYGSWGQSFFEGSFQKIPAKRIGVPEEVSSV--VCFLLSPAASFITGQ  251 (297)
T ss_dssp             TSGGGGGGGGTTGGGGSTTSSCBCTHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hccccCHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCcCCc
Confidence            433221    122234589999999999986  568899999998884

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.2e-43  Score=345.93  Aligned_cols=231  Identities=18%  Similarity=0.218  Sum_probs=196.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                           .++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~---------------------------~~~   53 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG---------------------------DNV   53 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------------------------GGE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---------------------------CCe
Confidence            46899999999999999999999999999999999999998887766542                           468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCC-----cccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGT-----LEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      .++.+|++ +.++++++++++.++||++|+||||||+.....     ..+.+.++|+++                     
T Consensus        54 ~~~~~Dv~-~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~---------------------  111 (276)
T d1bdba_          54 LGIVGDVR-SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEV---------------------  111 (276)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHH---------------------
T ss_pred             eEEecccc-cHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHH---------------------
Confidence            88999999 999999999999999999999999999875432     233344567776                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      |++|+.|+++++|+++|.|++++ |+||+++|.++..+.++.++|++||+|+.+|+|+||.||+++ ||||+|+||+|+|
T Consensus       112 ~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T  189 (276)
T d1bdba_         112 FHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINS  189 (276)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCS
T ss_pred             HHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEec
Confidence            99999999999999999998764 899999999999999999999999999999999999999985 9999999999999


Q ss_pred             CCCcccccCCc----------cccccccccCCCCChHHhhhccceeeecCC-CCCCCCCc
Q psy3252         329 PGFENEEKSKP----------RETSLISQTGGLYRPEVVKQSGLTITLCLP-PDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~~----------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~-~~~~~~g~  377 (475)
                      +|.........          .......|++|+++|||||++.  +||+++ ..++++|-
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v--~fL~S~~~a~~itG~  247 (276)
T d1bdba_         190 DLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAY--VFFATRGDAAPATGA  247 (276)
T ss_dssp             CCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHH--HHHHCHHHHTTCSSC
T ss_pred             CcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHcCCcccCCeeCc
Confidence            98764332111          1122346899999999999874  577774 56777773

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.9e-44  Score=347.69  Aligned_cols=224  Identities=16%  Similarity=0.112  Sum_probs=197.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++..... .                             +..+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~-----------------------------~~~~d   51 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-T-----------------------------YPQLK   51 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-H-----------------------------CTTSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-c-----------------------------EEEec
Confidence            79999999999999999999999999999999888877654322 1                             23589


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcccccc-CCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL-CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      ++ +.++++++++++.++||+||+||||||+.. ..++.+.+.++|++.                     +++|+.++|+
T Consensus        52 v~-~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~---------------------~~vnl~~~~~  109 (252)
T d1zmta1          52 PM-SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGA---------------------VEALQIRPFA  109 (252)
T ss_dssp             EC-CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHH---------------------HHHHTHHHHH
T ss_pred             cC-CHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHH---------------------HHHHhHHHHH
Confidence            99 889999999999999999999999999864 478999999999988                     9999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccccCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEEKSK  338 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~~~~  338 (475)
                      ++|+++|+|++++.|+|||+||.++..+.++..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|++........
T Consensus       110 ~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~  189 (252)
T d1zmta1         110 LVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTE  189 (252)
T ss_dssp             HHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHH
T ss_pred             HHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999876543221


Q ss_pred             -----c---cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         339 -----P---RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       339 -----~---~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                           +   .......|++|+++|||||++  .+||+++..++++|-
T Consensus       190 ~~~~~~e~~~~~~~~~pl~R~g~pedvA~~--v~fL~S~~s~~iTG~  234 (252)
T d1zmta1         190 PWKTNPEHVAHVKKVTALQRLGTQKELGEL--VAFLASGSCDYLTGQ  234 (252)
T ss_dssp             HHTTCHHHHHHHHHHSSSSSCBCHHHHHHH--HHHHHTTSCGGGTTC
T ss_pred             cccCCHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhcCCcCC
Confidence                 1   112234689999999999987  567899999988873

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.3e-43  Score=348.02  Aligned_cols=258  Identities=22%  Similarity=0.290  Sum_probs=211.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC---------hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD---------EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKA  163 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~---------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~  163 (475)
                      .|+|+||++|||||++|||+++|++|+++|++|++++|+         .+.++++.+++...+                 
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   64 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-----------------   64 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-----------------
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc-----------------
Confidence            467899999999999999999999999999999998654         556777777776543                 


Q ss_pred             CCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhcc
Q psy3252         164 CPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALW  243 (475)
Q Consensus       164 ~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (475)
                                ..+.+|++ +.++++++++++.+++|+||+||||||+...+++.+.+.++|+++                
T Consensus        65 ----------~~~~~d~~-~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~----------------  117 (302)
T d1gz6a_          65 ----------GKAVANYD-SVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDII----------------  117 (302)
T ss_dssp             ----------CEEEEECC-CGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHH----------------
T ss_pred             ----------cccccccc-hHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhh----------------
Confidence                      24678999 889999999999999999999999999999999999999999988                


Q ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         244 RSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       244 ~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                           +++|+.|+|+++|+++|+|++++.|+|||+||.++..+.++...|++||+|+.+|+++|+.|++++|||||+|+|
T Consensus       118 -----~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~P  192 (302)
T d1gz6a_         118 -----QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP  192 (302)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE
T ss_pred             -----hceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCC
Confidence                 999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccc----cC--CCccc--ccccCCC
Q psy3252         324 PDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEE----KS--KPRET--SLISQTG  395 (475)
Q Consensus       324 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~----~~--~~~~~--~~~~~~~  395 (475)
                      |.+.|++.....          .++.+.++|||||++.  +|||++.. .++|-.-.-    ..  ....+  ..+....
T Consensus       193 G~~~t~~~~~~~----------~~~~~~~~PedvA~~v--~fL~S~~a-~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~  259 (302)
T d1gz6a_         193 NAGSRMTETVMP----------EDLVEALKPEYVAPLV--LWLCHESC-EENGGLFEVGAGWIGKLRWERTLGAIVRKRN  259 (302)
T ss_dssp             ECCSTTTGGGSC----------HHHHHHSCGGGTHHHH--HHHTSTTC-CCCSCEEEEETTEEEEEEEEECCCEECCBTT
T ss_pred             CCCCcchhhcCc----------HhhHhcCCHHHHHHHH--HHHcCCCc-CCCCcEEEeCCCceeEEEEeecCcccccCCC
Confidence            999887533221          1345667899999875  46788765 456631000    00  00000  1122223


Q ss_pred             CCCChHHHHHHHHHHHh
Q psy3252         396 GLYRPEVVAKQLLEDAL  412 (475)
Q Consensus       396 ~~~~~e~vA~~i~~ai~  412 (475)
                      ...+||++++..-....
T Consensus       260 ~~~t~e~i~~~~~~i~d  276 (302)
T d1gz6a_         260 QPMTPEAVRDNWVKICD  276 (302)
T ss_dssp             BCCCHHHHHHTHHHHTC
T ss_pred             CCCCHHHHHHHHHHHhC
Confidence            46799999998665444

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5e-43  Score=340.18  Aligned_cols=233  Identities=23%  Similarity=0.294  Sum_probs=203.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIV-ARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      +|.||+||||||++|||+++|+.|+++|++|+++ .|+++.++++.+++.+.+                        .++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g------------------------~~~   58 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG------------------------AQG   58 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------CCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC------------------------CCc
Confidence            4789999999999999999999999999999986 466777888888888765                        568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +++.+|++ |.++++++++++.+++|+||+||||||+....++.+.+.++|++.                     +++|+
T Consensus        59 ~~~~~D~~-~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~---------------------~~~n~  116 (259)
T d1ja9a_          59 VAIQADIS-KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKV---------------------FNLNT  116 (259)
T ss_dssp             EEEECCTT-SHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHHHT
T ss_pred             eEecCCCC-CHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHH---------------------Hhhcc
Confidence            89999999 999999999999999999999999999998899999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .++++++|.++|+|+++  |++++++|..+. .+.+++..|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|+.
T Consensus       117 ~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~  194 (259)
T d1ja9a_         117 RGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  194 (259)
T ss_dssp             HHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             ceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhh
Confidence            99999999999999764  678877776554 478999999999999999999999999999999999999999999865


Q ss_pred             ccccCCc-------------cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         333 NEEKSKP-------------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       333 ~~~~~~~-------------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +......             .......|++|+++||||+++.+  |||++..++++|-
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~--fL~S~~a~~itG~  250 (259)
T d1ja9a_         195 ENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS--ALCQEESEWINGQ  250 (259)
T ss_dssp             HHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCSC
T ss_pred             hhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHH--HHhCchhcCCcCc
Confidence            4322111             11123468999999999998754  8999999988874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.2e-43  Score=335.86  Aligned_cols=219  Identities=27%  Similarity=0.335  Sum_probs=192.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.                                 ...+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---------------------------------~~~~   48 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------------------------------GHRY   48 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------------------------------CSEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---------------------------------CCcE
Confidence            6899999999999999999999999999999999998655431                                 1245


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.||++ +.      ++.+.+++|+||+||||||+....++.+.+.++|++.                     +++|+.+
T Consensus        49 ~~~Dv~-~~------~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~---------------------~~~n~~~  100 (234)
T d1o5ia_          49 VVCDLR-KD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEA---------------------IDSLFLN  100 (234)
T ss_dssp             EECCTT-TC------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHTHH
T ss_pred             EEcchH-HH------HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHH---------------------hhhhhhh
Confidence            789998 42      3456678899999999999988889999999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcccc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENEE  335 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~~  335 (475)
                      +++++|+++|.|++++.|+||+++|..+..+.++...|++||+|+.+|+++||.||+++|||||+|+||+|+|++..+..
T Consensus       101 ~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~  180 (234)
T d1o5ia_         101 MIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL  180 (234)
T ss_dssp             HHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS
T ss_pred             hhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999876543


Q ss_pred             cCC-ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         336 KSK-PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       336 ~~~-~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ... ........|++|+++|||||++.  +||+++..++++|-
T Consensus       181 ~~~~~~~~~~~~pl~R~~~pediA~~v--~fL~S~~s~~itG~  221 (234)
T d1o5ia_         181 SEEKKKQVESQIPMRRMAKPEEIASVV--AFLCSEKASYLTGQ  221 (234)
T ss_dssp             CHHHHHHHHTTSTTSSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHH--HHHhChhhcCCcCc
Confidence            322 22223356999999999999874  68899999998874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2.5e-43  Score=338.85  Aligned_cols=229  Identities=26%  Similarity=0.344  Sum_probs=196.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++   +                        .++.
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~------------------------~~~~   54 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---E------------------------AEAI   54 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---C------------------------SSEE
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C------------------------CceE
Confidence            478999999999999999999999999999999999998877665543   1                        5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++++|++ ++++++++++++.+++|++|+||||||.....++.+.+.++|+.+                     +++|+.
T Consensus        55 ~~~~Dls-~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~---------------------~~~n~~  112 (241)
T d2a4ka1          55 AVVADVS-DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKV---------------------LRVNLT  112 (241)
T ss_dssp             EEECCTT-SHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHH---------------------HHHHHH
T ss_pred             EEEecCC-CHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccc---------------------cccccc
Confidence            8999999 999999999999999999999999999998899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      +++.++|+++|.|.++  +.|+++||.+. .+.|++..|+++|+|+++|+++||.||+++|||||+|+||.|+|++....
T Consensus       113 ~~~~~~k~~~~~~~~~--~~i~~~ss~a~-~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~  189 (241)
T d2a4ka1         113 GSFLVARKAGEVLEEG--GSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL  189 (241)
T ss_dssp             HHHHHHHHHHHHCCTT--CEEEEECCCTT-CCHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS
T ss_pred             cccccccccccccccc--cceeecccccc-ccccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh
Confidence            9999999999998754  56666666554 45578899999999999999999999999999999999999999988765


Q ss_pred             ccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         335 EKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .+..........|++|+++|||||++  .+||+++..++++|-
T Consensus       190 ~~~~~~~~~~~~p~~r~~~p~dva~~--v~fL~S~~s~~itG~  230 (241)
T d2a4ka1         190 PPWAWEQEVGASPLGRAGRPEEVAQA--ALFLLSEESAYITGQ  230 (241)
T ss_dssp             CHHHHHHHHHTSTTCSCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hHhHHHHHHhCCCCCCCcCHHHHHHH--HHHHhcchhCCCcCc
Confidence            54443444446799999999999987  567888888888873

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.2e-43  Score=337.50  Aligned_cols=233  Identities=15%  Similarity=0.144  Sum_probs=193.7

Q ss_pred             CCCCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          94 LAPTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        94 ~~l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      ++|+||++|||||+|  |||+++|++|+++|++|++++|+++..+++. ++....                        .
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~~------------------------~   58 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEAL------------------------G   58 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHT------------------------T
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-Hhhhcc------------------------C
Confidence            578999999999986  9999999999999999999999976555544 343333                        3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccch
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWT  247 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (475)
                      ...++++|++ |.++++++++++.+++|+||+||||||+...    .++.+.+.++|+..                    
T Consensus        59 ~~~~~~~D~~-~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~--------------------  117 (256)
T d1ulua_          59 GALLFRADVT-QDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA--------------------  117 (256)
T ss_dssp             CCEEEECCTT-CHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHH--------------------
T ss_pred             cccccccccC-CHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHh--------------------
Confidence            4567899999 9999999999999999999999999998642    45678888889877                    


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         248 VIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       248 v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                       +++|+.+++.++++++|.|.++  |+||++||..+..+.++..+|++||+|+++|+++||.||+++|||||+|+||+|+
T Consensus       118 -~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~  194 (256)
T d1ulua_         118 -LEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVR  194 (256)
T ss_dssp             -HHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             -hhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceee
Confidence             9999999999999999999764  8999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCcc--ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         328 TPGFENEEKSKPR--ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       328 T~~~~~~~~~~~~--~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      |++..........  ......|++|+++|||||++  .+||+++..++++|-
T Consensus       195 t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~--v~fL~S~~s~~itG~  244 (256)
T d1ulua_         195 TVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNL--GLFLLSPLASGITGE  244 (256)
T ss_dssp             ---------CHHHHHHHHHHSTTSSCCCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             eccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhCchhCCccCC
Confidence            9987765433222  22234689999999999986  478889988888874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=336.60  Aligned_cols=225  Identities=22%  Similarity=0.305  Sum_probs=192.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ..||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+.                      .++.+
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~----------------------~~~~~   58 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEP----------------------QKTLF   58 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCG----------------------GGEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCC----------------------CcEEE
Confidence            36999999999999999999999999999999999999999999888765421                      57889


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.||++ +.++++++++++.+++|+||+||||||+...        ++|+++                     +++|+.+
T Consensus        59 ~~~Dv~-~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~--------~~~~~~---------------------~~~n~~~  108 (254)
T d2gdza1          59 IQCDVA-DQQQLRDTFRKVVDHFGRLDILVNNAGVNNE--------KNWEKT---------------------LQINLVS  108 (254)
T ss_dssp             EECCTT-SHHHHHHHHHHHHHHHSCCCEEEECCCCCCS--------SSHHHH---------------------HHHHTHH
T ss_pred             EEeecC-CHHHHHHHHHHHHHHcCCcCeeccccccccc--------ccchhe---------------------eeeehhh
Confidence            999999 9999999999999999999999999998643        335655                     9999999


Q ss_pred             HHHHHHHHHHHHHhCC---CCeEEEeccccccccCCCChhhHHHHHHHHHHHHH--HHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRG---RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEA--LYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~s--La~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ++++++.++|+|.+++   .|+||++||.++..+.++.++|++||+|+.+|+|+  |+.|++++|||||+|+||+|+|+|
T Consensus       109 ~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~  188 (254)
T d2gdza1         109 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  188 (254)
T ss_dssp             HHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh
Confidence            9999999999998764   48899999999999999999999999999999997  788999999999999999999998


Q ss_pred             CcccccCCc--------cccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         331 FENEEKSKP--------RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       331 ~~~~~~~~~--------~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ++.......        .......|++|+++|||||++.+  ||+++.  .++|
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~--fL~s~~--~itG  238 (254)
T d2gdza1         189 LESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI--TLIEDD--ALNG  238 (254)
T ss_dssp             HHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHH--HHHHCT--TCSS
T ss_pred             hhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHHcCC--CCCC
Confidence            765443211        11122358899999999998864  555542  3665

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.5e-42  Score=335.73  Aligned_cols=236  Identities=17%  Similarity=0.233  Sum_probs=205.7

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD-EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      ...+|+||++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++.+.+                        
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g------------------------   67 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG------------------------   67 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------------------------
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC------------------------
Confidence            4567999999999999999999999999999999999876 566788888887765                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ |+++++++++++.+++|+||++|||||.....++.+.+.++|+++                     ++
T Consensus        68 ~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~---------------------~~  125 (272)
T d1g0oa_          68 SDAACVKANVG-VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRV---------------------FT  125 (272)
T ss_dssp             CCEEEEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH---------------------HH
T ss_pred             CceeeEeCCCC-CHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHH---------------------hh
Confidence            56889999999 999999999999999999999999999998899999999999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQRGRGCIVITASQAANL-GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.++++++++++|+|.++  |++++++|..+.. +.++...|++||+|+++|+++||.||+++|||||+|+||+|+|+
T Consensus       126 ~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~  203 (272)
T d1g0oa_         126 INTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  203 (272)
T ss_dssp             HHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             hccceeeeeccccccccccc--cccccccccccccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence            99999999999999999865  7899998877654 57778899999999999999999999999999999999999999


Q ss_pred             CCcccccCCcc-------------ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         330 GFENEEKSKPR-------------ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       330 ~~~~~~~~~~~-------------~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +..........             ......|++|+++|||||.+.  +||+++..++++|-
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v--~fL~s~~s~~itG~  262 (272)
T d1g0oa_         204 MYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV--CFLASNDGGWVTGK  262 (272)
T ss_dssp             HHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             HHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHH--HHHhCchhcCccCc
Confidence            86543322110             112246899999999999875  57888888888874

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-40  Score=324.98  Aligned_cols=230  Identities=23%  Similarity=0.247  Sum_probs=205.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      |+||++||||||+|||+++|++|+++|++|++++|++++++++.+++....+                       ..+..
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~-----------------------~~~~~   68 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-----------------------ASAHY   68 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----------------------SEEEE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhc-----------------------ccchh
Confidence            8899999999999999999999999999999999999999999998877654                       67888


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ +.+.+..+++.+.+.+|.+|++|||||......+.+.+.++++.+                     +++|+.|
T Consensus        69 ~~~d~~-~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~---------------------~~vN~~~  126 (269)
T d1xu9a_          69 IAGTME-DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKS---------------------MEVNFLS  126 (269)
T ss_dssp             EECCTT-CHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHH---------------------HHHHTHH
T ss_pred             hhhhhh-hHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhh---------------------eeeehhh
Confidence            999999 999999999999999999999999999998888999999999988                     9999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHcc--CCcEEEEEeCCCCCCCCCcc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQ--SGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~--~gIrVn~V~PG~v~T~~~~~  333 (475)
                      ++.+++.++|+|++ ++|+||++||.++..+.|+.++|++||+|+.+|+++|+.|+++  .||+||+|+||+|+|+|..+
T Consensus       127 ~~~~~~~~lp~m~~-~~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~  205 (269)
T d1xu9a_         127 YVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  205 (269)
T ss_dssp             HHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHh-cCCcceEeccchhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH
Confidence            99999999999975 4699999999999999999999999999999999999999974  57999999999999996543


Q ss_pred             cccCCccccccccccCCCCChHHhhhccceeeecCCCCCCCCCccccccCCCcccccccCCCCCCChHHHHHHHHHHHhc
Q psy3252         334 EEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVAKQLLEDALK  413 (475)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~  413 (475)
                      ......                                                      .....+||++|+.++.++..
T Consensus       206 ~~~~~~------------------------------------------------------~~~~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         206 AVSGIV------------------------------------------------------HMQAAPKEECALEIIKGGAL  231 (269)
T ss_dssp             HSCGGG------------------------------------------------------GGGCBCHHHHHHHHHHHHHT
T ss_pred             hccCCc------------------------------------------------------cccCCCHHHHHHHHHHHhhc
Confidence            211100                                                      00146899999999999999


Q ss_pred             CCeeEEeCchhH
Q psy3252         414 GNYFSTVGLESY  425 (475)
Q Consensus       414 g~~~~~~~~~~~  425 (475)
                      ++..++.+...+
T Consensus       232 ~~~~i~~~~~~~  243 (269)
T d1xu9a_         232 RQEEVYYDSSLW  243 (269)
T ss_dssp             TCSEEEECSCHH
T ss_pred             CCCEEEccHHHH
Confidence            888887766443

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=9.9e-41  Score=329.33  Aligned_cols=240  Identities=18%  Similarity=0.186  Sum_probs=207.2

Q ss_pred             ccCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          91 KRYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        91 ~~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .+.++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+                       
T Consensus        18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g-----------------------   74 (294)
T d1w6ua_          18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-----------------------   74 (294)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----------------------
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcC-----------------------
Confidence            334799999999999999999999999999999999999999999999988876543                       


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      .++.++.+|++ +.++++++++.+.++++++|+||||||.....++.+.+.++++..                     +.
T Consensus        75 ~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~---------------------~~  132 (294)
T d1w6ua_          75 NKVHAIQCDVR-DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTI---------------------TD  132 (294)
T ss_dssp             SCEEEEECCTT-CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHH---------------------HH
T ss_pred             CceEEEEeccc-ChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhh---------------------ee
Confidence            56788999999 999999999999999999999999999998888999999999887                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHh-CCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         251 LNLYGTIHMTKALVEGMKQ-RGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~-~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +|+.+.+.+++.+.+.+.. +..+.|++++|..+..+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|+
T Consensus       133 ~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~  212 (294)
T d1w6ua_         133 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK  212 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             eecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccc
Confidence            9999999999888777665 445778899999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCcc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         330 GFENEEKSKPR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       330 ~~~~~~~~~~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +........+.   ......|++|+++|||||++.  +||+++..++++|-
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v--~fL~sd~s~~itG~  261 (294)
T d1w6ua_         213 GAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLA--AFLCSDYASWINGA  261 (294)
T ss_dssp             -----CCTTSHHHHHHHTTCTTSSCBCHHHHHHHH--HHHTSGGGTTCCSC
T ss_pred             hhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHH--HHHhCchhcCCCCc
Confidence            87765443322   222345899999999999874  67888888888874

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-41  Score=328.86  Aligned_cols=233  Identities=20%  Similarity=0.219  Sum_probs=200.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH---cCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAK---RGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~---~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .|+||++||||||+|||+++|++|++   +|++|++++|++++++++.++|...++.                      .
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~----------------------~   60 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD----------------------L   60 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTT----------------------S
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCC----------------------c
Confidence            57899999999999999999999996   7999999999999999999999887643                      5


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHH----hcCCccEEEEcccccc---CCCcccCCHHHHHHhhhhhhhccccchhhccc
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMD----RCGPVYMLVNCAGMAL---CGTLEEMTMQDIKVMEQPLWLRGYHTRLALWR  244 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~----~~g~IDvLVnnAG~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (475)
                      ++.++.||++ ++++++++++.+.+    .++.+|+||||||...   .+++.+.+.++|+++                 
T Consensus        61 ~~~~~~~Dvs-~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~-----------------  122 (259)
T d1oaaa_          61 KVVLAAADLG-TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY-----------------  122 (259)
T ss_dssp             EEEEEECCTT-SHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHH-----------------
T ss_pred             eEEEEEccCC-CHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHH-----------------
Confidence            7899999999 99999999999876    3468999999999864   356788999999988                 


Q ss_pred             cchhhhhhHHHHHHHHHHHHHHHHhCC--CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         245 SWTVIDLNLYGTIHMTKALVEGMKQRG--RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       245 ~~~v~~vN~~g~~~l~~~~lp~m~~~~--~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                          |++|+.|+++++++++|+|++++  .|+||++||.++..+.+++++|++||+|+++|+++||.|  .+|||||+|+
T Consensus       123 ----~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~  196 (259)
T d1oaaa_         123 ----WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYA  196 (259)
T ss_dssp             ----HHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEE
T ss_pred             ----HHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEE
Confidence                99999999999999999999875  589999999999999999999999999999999999999  6799999999


Q ss_pred             CCCCCCCCCcccccCC--cc---ccccccccCCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         323 PPDTDTPGFENEEKSK--PR---ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       323 PG~v~T~~~~~~~~~~--~~---~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ||+|+|+|........  +.   ......+++|+++|||+|++.+.++  .. +++++|
T Consensus       197 PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll--~~-~s~~TG  252 (259)
T d1oaaa_         197 PGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLL--QK-DTFQSG  252 (259)
T ss_dssp             CCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHH--HH-CCSCTT
T ss_pred             cCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hh-ccCCCC
Confidence            9999999876443221  11   1122357899999999999876553  32 346665

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-40  Score=326.93  Aligned_cols=193  Identities=29%  Similarity=0.392  Sum_probs=165.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEE---EEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVT---IVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vv---l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+|||||||+|||+++|+.|+++|++|+   +++|+.+..+++.+...+....                     ..++.
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~---------------------~~~~~   60 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACP---------------------PGSLE   60 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCC---------------------TTSEE
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhcc---------------------CCceE
Confidence            47899999999999999999999999754   4566665555554444432211                     16789


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.||++ |.++++++++++.+  |++|+||||||....+++.+.+.++|+++                     +++|+.
T Consensus        61 ~~~~Dv~-~~~~~~~~~~~~~~--g~idilvnnag~~~~~~~~~~~~e~~~~~---------------------~~vN~~  116 (285)
T d1jtva_          61 TLQLDVR-DSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASV---------------------LDVNVV  116 (285)
T ss_dssp             EEECCTT-CHHHHHHHHHTCTT--SCCSEEEECCCCCCCSCGGGSCHHHHHHH---------------------HHHHTH
T ss_pred             EEecccc-chHhhhhhhhhccc--cchhhhhhcccccccccccchhHhhhhhh---------------------hhcchh
Confidence            9999999 99999999988743  89999999999999999999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCccc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFENE  334 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~~  334 (475)
                      |+++++++++|+|++++.|+||++||+++..+.|+.+.|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|+++.
T Consensus       117 g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~  196 (285)
T d1jtva_         117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987754


Q ss_pred             c
Q psy3252         335 E  335 (475)
Q Consensus       335 ~  335 (475)
                      .
T Consensus       197 ~  197 (285)
T d1jtva_         197 L  197 (285)
T ss_dssp             -
T ss_pred             c
Confidence            3

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-40  Score=317.79  Aligned_cols=229  Identities=23%  Similarity=0.283  Sum_probs=193.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.                           ....
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~---------------------------~~~~   54 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG---------------------------NNCV   54 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC---------------------------TTEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---------------------------CCcc
Confidence            6899999999999999999999999999999999999999988877763                           3467


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC------CCcccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC------GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      ...+|+. +.+.++..++.+...++.+|.+++|+++...      .++.+.+.++|+++                     
T Consensus        55 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------  112 (248)
T d2o23a1          55 FAPADVT-SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV---------------------  112 (248)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHH---------------------
T ss_pred             ccccccc-ccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHH---------------------
Confidence            7899999 9999999999999999999999999987643      34566778888887                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhC------CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQR------GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~------~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      +++|+.++++++++++|.|..+      +.|+||++||..+..+.+++++|++||+|+++|+++|+.|++++|||||+|+
T Consensus       113 ~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~  192 (248)
T d2o23a1         113 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIA  192 (248)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeec
Confidence            9999999999999999998754      5689999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCcccccccccc-CCCCChHHhhhccceeeecCCCCCCCCC
Q psy3252         323 PPDTDTPGFENEEKSKPRETSLISQT-GGLYRPEVVKQSGLTITLCLPPDTDTPG  376 (475)
Q Consensus       323 PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~~~~~~~~~~~~~~~~~g  376 (475)
                      ||+|+|+|+....+..........|+ +|+++|||||++.+  |++.  +++++|
T Consensus       193 PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~--fL~s--~~~itG  243 (248)
T d2o23a1         193 PGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQ--AIIE--NPFLNG  243 (248)
T ss_dssp             ECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHH--HHHH--CTTCCS
T ss_pred             cCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHH--HHHh--CCCCCc
Confidence            99999999887665544444444565 99999999998754  5554  456666

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-41  Score=324.78  Aligned_cols=226  Identities=22%  Similarity=0.303  Sum_probs=194.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++++++++.++                             ..+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~-----------------------------~~~~   53 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----------------------------PGIQ   53 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS-----------------------------TTEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-----------------------------cCCc
Confidence            48999999999999999999999999999999999998877654321                             3366


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ...+|+. +.+.+    +...+.++++|+||||||.....++.+.+.++|+..                     +++|+.
T Consensus        54 ~~~~d~~-~~~~~----~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~---------------------~~vn~~  107 (245)
T d2ag5a1          54 TRVLDVT-KKKQI----DQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFS---------------------MNLNVR  107 (245)
T ss_dssp             EEECCTT-CHHHH----HHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHH---------------------HHHHTH
T ss_pred             eeeeecc-ccccc----cccccccccceeEEecccccCCCChhhCCHHHHHHH---------------------HHHhhc
Confidence            7888988 75544    455667799999999999999899999999999988                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCCcc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGFEN  333 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~~~  333 (475)
                      ++++++++++|.|.+++.|+||++||..+. .+.++..+|++||+|+++|+|+||.||+++|||||+|+||+|+||+...
T Consensus       108 ~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~  187 (245)
T d2ag5a1         108 SMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE  187 (245)
T ss_dssp             HHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred             cchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHh
Confidence            999999999999999999999999998775 5788899999999999999999999999999999999999999998765


Q ss_pred             cccCCcc------ccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         334 EEKSKPR------ETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       334 ~~~~~~~------~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .......      ......|++|+++||||+++  ..||+++...+++|-
T Consensus       188 ~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~--v~fL~s~~s~~iTG~  235 (245)
T d2ag5a1         188 RIQARGNPEEARNDFLKRQKTGRFATAEEIAML--CVYLASDESAYVTGN  235 (245)
T ss_dssp             HHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             hhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHH--HHHHhChhhCCCcCc
Confidence            4433221      11224689999999999986  566888888888874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.5e-40  Score=321.92  Aligned_cols=188  Identities=23%  Similarity=0.276  Sum_probs=166.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.++.+++. ++....+.                      .++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~-~~~~~~~~----------------------~~~   57 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA-ELKAINPK----------------------VNI   57 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHH-HHHHHCTT----------------------SEE
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHH-HHHhhCCC----------------------CCE
Confidence            5789999999999999999999999999999999988877765554 44444332                      578


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++.+.++++++++++.+++|+||+||||||..        +.++|+++                     +++|+
T Consensus        58 ~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~--------~~~~~~~~---------------------~~vNl  108 (254)
T d1sbya1          58 TFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERT---------------------IAINF  108 (254)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC--------CTTCHHHH---------------------HHHHT
T ss_pred             EEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCC--------CHHHHHHH---------------------HHHHh
Confidence            99999998567789999999999999999999999964        44567766                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCC---CCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRG---RGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~---~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      .|+++++++++|.|.+++   .|+||++||.++..+.+++.+|++||+|+.+|+++|+.||+++|||||+|+||+|+|+|
T Consensus       109 ~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~  188 (254)
T d1sbya1         109 TGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             HHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             HHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc
Confidence            999999999999997753   58999999999999999999999999999999999999999999999999999999997


Q ss_pred             Ccc
Q psy3252         331 FEN  333 (475)
Q Consensus       331 ~~~  333 (475)
                      .+.
T Consensus       189 ~~~  191 (254)
T d1sbya1         189 VHT  191 (254)
T ss_dssp             HHS
T ss_pred             ccc
Confidence            543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-40  Score=321.75  Aligned_cols=215  Identities=21%  Similarity=0.256  Sum_probs=185.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKR-GAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~-Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++|||||++|||+++|++|+++ |++|++++|+.++++++.++|++.+                        .++.++.
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~------------------------~~~~~~~   59 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG------------------------LSPRFHQ   59 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT------------------------CCCEEEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC------------------------CcEEEEE
Confidence            46699999999999999999986 8999999999999999999998865                        4567899


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      ||++ |.++++++++++.+++|+||+||||||+.......+.+.++|+.+                     |++|++|++
T Consensus        60 ~Dvs-~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~---------------------~~vN~~g~~  117 (275)
T d1wmaa1          60 LDID-DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVT---------------------MKTNFFGTR  117 (275)
T ss_dssp             CCTT-CHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHH---------------------HHHHTHHHH
T ss_pred             EecC-CHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHH---------------------HHHHHHHHH
Confidence            9999 999999999999999999999999999988888888888888887                     999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccCC-----------------------------------------CChhhHHH
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGIY-----------------------------------------GLAAYTSS  296 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-----------------------------------------~~~~Y~aS  296 (475)
                      ++++.++|+|+++  |+||++||+.+..+.+                                         +..+|++|
T Consensus       118 ~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~s  195 (275)
T d1wmaa1         118 DVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVT  195 (275)
T ss_dssp             HHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHH
T ss_pred             HHHHHHHHHHHhc--CCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHH
Confidence            9999999999754  8999999987653321                                         23579999


Q ss_pred             HHHHHHHHHHHHHHHcc----CCcEEEEEeCCCCCCCCCcccccCCccccccccccCCCCChHHhhhccceeeecCCCCC
Q psy3252         297 KFALKGFAEALYMEVKQ----SGLTITLCLPPDTDTPGFENEEKSKPRETSLISQTGGLYRPEVVKQSGLTITLCLPPDT  372 (475)
Q Consensus       297 KaAl~~l~~sLa~El~~----~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~  372 (475)
                      |+|+.+|++.++.||++    .||+||+|+||+|+|+|....               ....|||+|++.+++....+...
T Consensus       196 K~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~---------------~~~~pee~A~~~~~~a~~~~~~~  260 (275)
T d1wmaa1         196 KIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK---------------ATKSPEEGAETPVYLALLPPDAE  260 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT---------------CSBCHHHHTHHHHHHHSCCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc---------------ccCCHHHHHHHHHHHHcCChhhc
Confidence            99999999999999976    499999999999999986543               23479999998877655555544


Q ss_pred             CCCC
Q psy3252         373 DTPG  376 (475)
Q Consensus       373 ~~~g  376 (475)
                      ..+|
T Consensus       261 ~~~G  264 (275)
T d1wmaa1         261 GPHG  264 (275)
T ss_dssp             CCCS
T ss_pred             CCCe
Confidence            4444

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.5e-37  Score=299.43  Aligned_cols=188  Identities=18%  Similarity=0.220  Sum_probs=166.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHH---HcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAA---KRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La---~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|+|||||||+|||+++|++|+   ++|++|++++|++++++++.+.. +.+                        .++.
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-~~~------------------------~~~~   56 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-KNH------------------------SNIH   56 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-HHC------------------------TTEE
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-hcC------------------------CcEE
Confidence            4799999999999999999996   57999999999999988776433 333                        4688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHH--hcCCccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         175 YVSLDISKDYENIRSALQPAMD--RCGPVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~--~~g~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.||++ |.++++++++++.+  ++++||+||||||+... ..+.+.+.++++.+                     +++
T Consensus        57 ~~~~Dvs-~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~---------------------~~v  114 (248)
T d1snya_          57 ILEIDLR-NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDT---------------------LQT  114 (248)
T ss_dssp             EEECCTT-CGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHH---------------------HHH
T ss_pred             EEEEEec-cHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHH---------------------HHh
Confidence            9999999 99999999999854  68999999999998755 46778899999988                     999


Q ss_pred             hHHHHHHHHHHHHHHHHhC-----------CCCeEEEeccccccc---cCCCChhhHHHHHHHHHHHHHHHHHHccCCcE
Q psy3252         252 NLYGTIHMTKALVEGMKQR-----------GRGCIVITASQAANL---GIYGLAAYTSSKFALKGFAEALYMEVKQSGLT  317 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~-----------~~g~IV~iSS~a~~~---~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIr  317 (475)
                      |+.|+++++++++|+|+++           +.|+||+++|..+..   +.++..+|++||+|+.+|+++|+.|++++||+
T Consensus       115 N~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~  194 (248)
T d1snya_         115 NTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIM  194 (248)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             ccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence            9999999999999999864           468999999998865   35567899999999999999999999999999


Q ss_pred             EEEEeCCCCCCCCCc
Q psy3252         318 ITLCLPPDTDTPGFE  332 (475)
Q Consensus       318 Vn~V~PG~v~T~~~~  332 (475)
                      ||+|+||+|+|+|..
T Consensus       195 vn~v~PG~v~T~m~~  209 (248)
T d1snya_         195 CVSLHPGWVKTDMGG  209 (248)
T ss_dssp             EEEECCCSBCSTTTC
T ss_pred             EEEcCCCcccCCccc
Confidence            999999999999754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=4.1e-37  Score=300.81  Aligned_cols=261  Identities=13%  Similarity=0.060  Sum_probs=188.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEec-ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVAR-DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .++|||||++|||+++|++|+++|++|+++++ +.+.++++.+++.+..+.....  +..    ...........+....
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~----d~~~~~~~~~~~~~~~   76 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT--VQA----DLSNVATAPVSGADGS   76 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEE--EEC----CCSSSCBCCCC----C
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEE--EEe----eccccccccccccccc
Confidence            38999999999999999999999999998765 5677888888888766432100  000    0000111123455667


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.++++++++++.+++|+||+||||||+....++.+.+.++++....       ..+.......+++++|+.+++
T Consensus        77 ~dv~-~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~n~~~~~  148 (284)
T d1e7wa_          77 APVT-LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVG-------DREAMETATADLFGSNAIAPY  148 (284)
T ss_dssp             CCBC-HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC--------------------HHHHHHHHHHHHHHTHHHH
T ss_pred             ccCC-CHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhh-------hHHHHHHHHHHHHhhheeeee
Confidence            8899 99999999999999999999999999999888888887777654310       000111112346999999999


Q ss_pred             HHHHHHHHHHH------hCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         258 HMTKALVEGMK------QRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       258 ~l~~~~lp~m~------~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      ++++.+.+.+.      +.+.++||+++|..+..+.+++.+|++||+|+.+|+++||.||+++|||||+|+||++.+.. 
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~-  227 (284)
T d1e7wa_         149 FLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-  227 (284)
T ss_dssp             HHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-
T ss_pred             eeeccccchhhhhHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc-
Confidence            99999988754      33468999999999999999999999999999999999999999999999999999866542 


Q ss_pred             cccccCCccccccccc-cCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         332 ENEEKSKPRETSLISQ-TGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       332 ~~~~~~~~~~~~~~~~-~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                       ...+..........| .+|+++|||||++.  +||+++..++++|-
T Consensus       228 -~~~~~~~~~~~~~~pl~~R~~~peeiA~~v--~fL~S~~s~~itG~  271 (284)
T d1e7wa_         228 -DMPPAVWEGHRSKVPLYQRDSSAAEVSDVV--IFLCSSKAKYITGT  271 (284)
T ss_dssp             -GSCHHHHHHHHTTCTTTTSCBCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             -cCCHHHHHHHHhcCCCCCCCCCHHHHHHHH--HHHhCchhcCccCC
Confidence             222222222222345 49999999999875  57888888888874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.9e-37  Score=296.74  Aligned_cols=188  Identities=22%  Similarity=0.291  Sum_probs=158.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+    ..+                       .++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~~-----------------------~~~   53 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IKD-----------------------SRV   53 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CCC-----------------------TTE
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hhC-----------------------Cce
Confidence            3468999999999999999999999996  68899999988776532    221                       568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCC--ccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGP--VYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVID  250 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~--IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (475)
                      +++.+|++ +.++++++++++.+.++.  ||+||||||+... .++.+.+.++|+++                     ++
T Consensus        54 ~~~~~Dvs-~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~---------------------~~  111 (250)
T d1yo6a1          54 HVLPLTVT-CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQ---------------------LD  111 (250)
T ss_dssp             EEEECCTT-CHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHH---------------------HH
T ss_pred             EEEEEecC-CHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHH---------------------HH
Confidence            89999999 999999999999998764  9999999998754 67788899999988                     99


Q ss_pred             hhHHHHHHHHHHHHHHHHhCC-----------CCeEEEeccccccccC-------CCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         251 LNLYGTIHMTKALVEGMKQRG-----------RGCIVITASQAANLGI-------YGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       251 vN~~g~~~l~~~~lp~m~~~~-----------~g~IV~iSS~a~~~~~-------~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                      +|+.|++++++.++|+|++++           .+++|+++|..+....       .+..+|++||+|+.+|+++|+.||+
T Consensus       112 vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~  191 (250)
T d1yo6a1         112 VNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK  191 (250)
T ss_dssp             HHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG
T ss_pred             HHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999998642           3789999987765533       2345799999999999999999999


Q ss_pred             cCCcEEEEEeCCCCCCCCCc
Q psy3252         313 QSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       313 ~~gIrVn~V~PG~v~T~~~~  332 (475)
                      ++||+||+|+||+|+|+|..
T Consensus       192 ~~gI~v~~i~PG~v~T~m~~  211 (250)
T d1yo6a1         192 DDNVLVVNFCPGWVQTNLGG  211 (250)
T ss_dssp             GGTCEEEEEECCCC------
T ss_pred             ccCeEEEEEecCCCCCCCCC
Confidence            99999999999999999643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-36  Score=292.22  Aligned_cols=231  Identities=16%  Similarity=0.127  Sum_probs=192.4

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+||++|||||++  |||+++|+.|+++|++|++++|+++..+.+ +++....                        ...
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~------------------------~~~   57 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQL------------------------GSD   57 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHT------------------------TCC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhc------------------------CCc
Confidence            7899999999998  899999999999999999999997655544 4444433                        335


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCc-----ccCCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTL-----EEMTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      ..+.+|++ +..++...++++.+.++++|++||||+.......     .....+.+...                     
T Consensus        58 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~---------------------  115 (258)
T d1qsga_          58 IVLQCDVA-EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIA---------------------  115 (258)
T ss_dssp             CEEECCTT-CHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHH---------------------
T ss_pred             ceeecccc-hHHHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHH---------------------
Confidence            57889999 9999999999999999999999999998754333     23334445544                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +++|+.+.+.+++.+.+.|.+  ++.||++||..+..+.|++..|++||+|+++|+++||.||+++|||||+|+||+|+|
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T  193 (258)
T d1qsga_         116 HDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT  193 (258)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccc
Confidence            999999999999999998864  367999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCccc--cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         329 PGFENEEKSKPRE--TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ++...........  .....|++|+++||||+++  .+||+++..++++|-
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~--v~fL~s~~s~~itG~  242 (258)
T d1qsga_         194 LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNS--AAFLCSDLSAGISGE  242 (258)
T ss_dssp             TTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHH--HHHHTSGGGTTCCSC
T ss_pred             ccccccchhhhHHHHHHhCCCCCCCcCHHHHHHH--HHHHhCchhcCccCc
Confidence            9877654333222  2234689999999999975  578889888888884

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.2e-36  Score=301.04  Aligned_cols=243  Identities=14%  Similarity=0.101  Sum_probs=187.7

Q ss_pred             CCCEEEEec--CCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          97 TNGTLSVTG--GSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        97 ~gk~vLITG--as~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+|++||||  +++|||+++|++|+++|++|++++++...................         .  . ..........
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~---------~--~-~~~~~~~~~~   68 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDM---------I--I-DKDKKMNILD   68 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGG---------E--E-TTTEECCEEE
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHH---------H--H-HHHhhhhhhh
Confidence            379999999  568999999999999999999999987765554443322211100         0  0 0000001122


Q ss_pred             EE--------------------EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC--CCcccCCHHHHHHhhhhhh
Q psy3252         175 YV--------------------SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC--GTLEEMTMQDIKVMEQPLW  232 (475)
Q Consensus       175 ~~--------------------~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~  232 (475)
                      ..                    .+|++ +.++++++++.+.+.||+||+||||||....  +++.+.+.++|++.     
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~-----  142 (329)
T d1uh5a_          69 MLPFDASFDTANDIDEETKNNKRYNML-QNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDA-----  142 (329)
T ss_dssp             EEECCTTCSSGGGCCHHHHTSHHHHTC-CCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHH-----
T ss_pred             cccccceehhhcccchhhhhhhhhhhh-hHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhh-----
Confidence            23                    34666 7788999999999999999999999998753  57889999999988     


Q ss_pred             hccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCC-ChhhHHHHHHHHHHHHHHHHHH
Q psy3252         233 LRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYG-LAAYTSSKFALKGFAEALYMEV  311 (475)
Q Consensus       233 ~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~-~~~Y~aSKaAl~~l~~sLa~El  311 (475)
                                      +++|+++++.++|+++|+|.+  .|+||++||.++..+.|+ ...|++||+|+++|+|+||.||
T Consensus       143 ----------------~~vn~~~~~~~~k~~~~~m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~El  204 (329)
T d1uh5a_         143 ----------------LSKSSYSLISLCKYFVNIMKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHL  204 (329)
T ss_dssp             ----------------HHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------------cccchhHHHHHHHHHHhhccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHH
Confidence                            999999999999999999965  489999999999998887 4679999999999999999999


Q ss_pred             cc-CCcEEEEEeCCCCCCCCCccccc---------------------------------------------CCccccccc
Q psy3252         312 KQ-SGLTITLCLPPDTDTPGFENEEK---------------------------------------------SKPRETSLI  345 (475)
Q Consensus       312 ~~-~gIrVn~V~PG~v~T~~~~~~~~---------------------------------------------~~~~~~~~~  345 (475)
                      ++ +|||||+|+||+|+|++......                                             .........
T Consensus       205 a~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (329)
T d1uh5a_         205 GRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKY  284 (329)
T ss_dssp             HHHHCCEEEEEEECCCCCTTGGGCC------------------------------------------CHHHHHHHHHHHH
T ss_pred             hcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhcc
Confidence            86 69999999999999953322100                                             000111223


Q ss_pred             cccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         346 SQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       346 ~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      .|++|.++|||||.+.  +||+++..++++|-
T Consensus       285 ~Pl~R~~~pedvA~~v--~fLaSd~s~~iTGq  314 (329)
T d1uh5a_         285 APLRQKLLSTDIGSVA--SFLLSRESRAITGQ  314 (329)
T ss_dssp             SSSCSCCCHHHHHHHH--HHHHSGGGTTCCSC
T ss_pred             CCCCCCcCHHHHHHHH--HHHhCchhCCccCC
Confidence            5899999999999875  68999999999884

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-35  Score=282.45  Aligned_cols=217  Identities=26%  Similarity=0.333  Sum_probs=177.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +|++|||||++|||+++|++|+++|++|++++|+++.                                    .+.....
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------------------------------~~~~~~~   44 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------------------------------EDLIYVE   44 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------------------------------SSSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------------------------------ccceEee
Confidence            5899999999999999999999999999999998642                                    2345688


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC----CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      +|++ +...+..+.....+.+ ..|.+++++++...    ......+.+.++.+                     +++|+
T Consensus        45 ~d~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~n~  101 (241)
T d1uaya_          45 GDVT-REEDVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRV---------------------LEVNL  101 (241)
T ss_dssp             CCTT-CHHHHHHHHHHHHHHS-CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHH---------------------HHHHT
T ss_pred             cccc-chhhhHHHHHhhhccc-cccchhhhhhccccccccccccchhHHHHHHH---------------------HHHHh
Confidence            9999 9899998888877665 45666667765432    34445667788877                     99999


Q ss_pred             HHHHHHHHHHHHH------HHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         254 YGTIHMTKALVEG------MKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       254 ~g~~~l~~~~lp~------m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      .+++.+++.+.+.      |.+++.|+|||+||.++..+.++..+|++||+|+.+|+++||.||+++|||||+|+||+|+
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~  181 (241)
T d1uaya_         102 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFD  181 (241)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCS
T ss_pred             hhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccc
Confidence            9999999999998      4455679999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCccccccccc-cCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         328 TPGFENEEKSKPRETSLISQ-TGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       328 T~~~~~~~~~~~~~~~~~~~-~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      |+++...............+ .+|+++|||||++.+  ||++  +++++|-
T Consensus       182 T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~--fL~s--~~~iTG~  228 (241)
T d1uaya_         182 TPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVL--HILE--NPMLNGE  228 (241)
T ss_dssp             SHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHH--HHHH--CTTCCSC
T ss_pred             ccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHH--HHHh--CCCCCCC
Confidence            99877655443333233334 499999999998754  5555  4567763

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-35  Score=281.47  Aligned_cols=179  Identities=18%  Similarity=0.167  Sum_probs=155.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +||+||||||++|||+++|++|+++|++|+++++++....                                  .....+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----------------------------------~~~~~~   46 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------------------------------SASVIV   46 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------------------------------SEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------------------------------ccccee
Confidence            4899999999999999999999999999999998754210                                  334566


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcC--CccEEEEccccccC-CCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCG--PVYMLVNCAGMALC-GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g--~IDvLVnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .+|.+ +.++++.+...+.+.++  +||+||||||.... ....+.+.++|+.+                     |++|+
T Consensus        47 ~~~~~-~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~---------------------~~~n~  104 (236)
T d1dhra_          47 KMTDS-FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLM---------------------WKQSI  104 (236)
T ss_dssp             CCCSC-HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHH---------------------HHHHH
T ss_pred             ecccC-cHHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHH---------------------HHHcc
Confidence            78887 78888888888877654  79999999997544 45556667888877                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v~T~~~  331 (475)
                      .++++++++++|+|++  .|+||++||.++..+.++..+|++||+|+.+|+++|+.|++  ++||+||+|+||+|+|||.
T Consensus       105 ~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~  182 (236)
T d1dhra_         105 WTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN  182 (236)
T ss_dssp             HHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH
T ss_pred             hHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc
Confidence            9999999999999975  49999999999999999999999999999999999999998  5899999999999999975


Q ss_pred             cc
Q psy3252         332 EN  333 (475)
Q Consensus       332 ~~  333 (475)
                      +.
T Consensus       183 ~~  184 (236)
T d1dhra_         183 RK  184 (236)
T ss_dssp             HH
T ss_pred             hh
Confidence            43

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.3e-34  Score=284.87  Aligned_cols=247  Identities=13%  Similarity=0.077  Sum_probs=186.2

Q ss_pred             CCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          93 YLAPTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        93 ~~~l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .++|+||++|||||++  |||+++|++|+++|++|++++|+........... .......           .........
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~   70 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLR-RGKFDQS-----------RVLPDGSLM   70 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHH-TTTTTGG-----------GBCTTSSBC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHH-Hhhhhhh-----------hhhhhhhhh
Confidence            3789999999999875  9999999999999999999999865443332222 1111000           000000000


Q ss_pred             ceEEEEEee--------------------cCCCHHHHHHHHHHHHHhcCCccEEEEcccccc--CCCcccCCHHHHHHhh
Q psy3252         171 RFIEYVSLD--------------------ISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL--CGTLEEMTMQDIKVME  228 (475)
Q Consensus       171 ~~v~~~~~D--------------------vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~--~~~~~~~~~~~~~~~~  228 (475)
                      ..-....+|                    .+ +..+++++++++.++||+||+||||||...  ..++.+.+.++|+++ 
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~-~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~-  148 (297)
T d1d7oa_          71 EIKKVYPLDAVFDNPEDVPEDVKANKRYAGS-SNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAA-  148 (297)
T ss_dssp             CEEEEEEECTTCCSGGGSCHHHHTSHHHHHC-CCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHH-
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhhhhhc-cHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhccccccc-
Confidence            111223333                    23 455678999999999999999999999864  467889999999988 


Q ss_pred             hhhhhccccchhhccccchhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccc-ccCCCChhhHHHHHHHHHHHHHH
Q psy3252         229 QPLWLRGYHTRLALWRSWTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAAN-LGIYGLAAYTSSKFALKGFAEAL  307 (475)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~-~~~~~~~~Y~aSKaAl~~l~~sL  307 (475)
                                          +++|+.+++++++++++.|.++  |++++++|.++. ...+....|+++|+++.++++.+
T Consensus       149 --------------------~~vn~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~  206 (297)
T d1d7oa_         149 --------------------ISASSYSFVSLLSHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVL  206 (297)
T ss_dssp             --------------------HHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHH
T ss_pred             --------------------ccchhhhhhhhhhHHHHHhhcC--Ccceeeeehhhcccccccccceeccccccccccccc
Confidence                                9999999999999999988765  566666665544 34577789999999999999999


Q ss_pred             HHHHc-cCCcEEEEEeCCCCCCCCCcccccCCc--cccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         308 YMEVK-QSGLTITLCLPPDTDTPGFENEEKSKP--RETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       308 a~El~-~~gIrVn~V~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      +.|++ ++|||||+|+||+|.|++.........  .......|++|+++|||||++  .+||+++..++++|-
T Consensus       207 a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~--v~fL~S~~a~~itGq  277 (297)
T d1d7oa_         207 AFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNA--AAFLVSPLASAITGA  277 (297)
T ss_dssp             HHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHH--HHHHTSGGGTTCCSC
T ss_pred             chhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHH--HHHHhCchhcCCcCc
Confidence            99996 689999999999999998875432222  223334689999999999986  578999988888873

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=8.6e-34  Score=274.21  Aligned_cols=241  Identities=16%  Similarity=0.135  Sum_probs=183.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      ++||||||+|||+++|++|+++|++|++++|+.+ ..+++.+++.+..+                       .+...+.+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~   59 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-----------------------GSAVLCKG   59 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-----------------------TCEEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcC-----------------------CceEEEec
Confidence            8999999999999999999999999999999855 45778888887764                       45566666


Q ss_pred             ecCC---CHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         179 DISK---DYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       179 Dvt~---d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      |+.+   ..+.++++++.+.+++|+||+||||||+..+.++.+...+.+.....          .........+.+|+.+
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~  129 (266)
T d1mxha_          60 DLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK----------PIDAQVAELFGSNAVA  129 (266)
T ss_dssp             CCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC---------------------CHHHHHHHHHHHHTHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhccc----------cccccccccccccccc
Confidence            6541   35678888899999999999999999998776655443332221100          0001112348899999


Q ss_pred             HHHHHHHHHHHHHhC-----CCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQR-----GRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~-----~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      .+.+.+...+.+...     ..+.+++++|..+..+.|++..|++||+|+++|+++||.|++++|||||+|+||+|+|++
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~  209 (266)
T d1mxha_         130 PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPP  209 (266)
T ss_dssp             HHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCS
T ss_pred             ccchhhhhccccccccccccccccchhhhhccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccc
Confidence            999999888877543     347889999999999999999999999999999999999999999999999999999996


Q ss_pred             CcccccCCccccccccccCC-CCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         331 FENEEKSKPRETSLISQTGG-LYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~-~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ......  ........|++| .++|||||++  .+||+++..++++|-
T Consensus       210 ~~~~~~--~~~~~~~~pl~r~~~~peeva~~--v~fL~s~~s~~itG~  253 (266)
T d1mxha_         210 AMPQET--QEEYRRKVPLGQSEASAAQIADA--IAFLVSKDAGYITGT  253 (266)
T ss_dssp             SSCHHH--HHHHHTTCTTTSCCBCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             cCCHHH--HHHHHhcCCCCCCCCCHHHHHHH--HHHHhCchhCCccCC
Confidence            554221  112223457765 5899999987  478888888888874

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.1e-34  Score=276.81  Aligned_cols=178  Identities=18%  Similarity=0.162  Sum_probs=150.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++||||||++|||+++|++|+++|++|++++|++++..                                  .....+.
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----------------------------------~~~~~~~   47 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------------------------------DSNILVD   47 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------------------------------SEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----------------------------------cccceec
Confidence            346799999999999999999999999999999864210                                  2334566


Q ss_pred             eecCCCHHHHHHHHHHHHH--hcCCccEEEEccccccCC-CcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         178 LDISKDYENIRSALQPAMD--RCGPVYMLVNCAGMALCG-TLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~--~~g~IDvLVnnAG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      +|+. +.+......+.+..  ++|+||+||||||+.... +..+.+.++|+.+                     +++|+.
T Consensus        48 ~~~~-~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~---------------------~~~n~~  105 (235)
T d1ooea_          48 GNKN-WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLM---------------------IKQSVW  105 (235)
T ss_dssp             TTSC-HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHH---------------------HHHHHH
T ss_pred             cccC-chhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhH---------------------hhhHHH
Confidence            7777 77777766666666  468999999999986553 4445556778877                     999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHc--cCCcEEEEEeCCCCCCCCCc
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVK--QSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~--~~gIrVn~V~PG~v~T~~~~  332 (475)
                      ++++++++++|+|+++  |+||++||.++..+.++..+|++||+|+.+|+++|+.|++  +.||+||+|+||+++|++.+
T Consensus       106 ~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~  183 (235)
T d1ooea_         106 SSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR  183 (235)
T ss_dssp             HHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH
T ss_pred             HHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchh
Confidence            9999999999999754  8999999999999999999999999999999999999998  57899999999999999755


Q ss_pred             c
Q psy3252         333 N  333 (475)
Q Consensus       333 ~  333 (475)
                      .
T Consensus       184 ~  184 (235)
T d1ooea_         184 K  184 (235)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=4.5e-34  Score=278.13  Aligned_cols=232  Identities=13%  Similarity=0.112  Sum_probs=177.0

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGSS--GIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas~--GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+.+.                        .
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~------------------------~   56 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN------------------------S   56 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT------------------------C
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCC------------------------c
Confidence            37899999999865  9999999999999999999999954 4445566666552                        3


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCccc----CCHHHHHHhhhhhhhccccchhhccccchh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEE----MTMQDIKVMEQPLWLRGYHTRLALWRSWTV  248 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (475)
                      ..++.+|++ +.++++++++++.+.+|++|+||||+|........+    ...+.+...                     
T Consensus        57 ~~~~~~d~~-~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~---------------------  114 (274)
T d2pd4a1          57 PYVYELDVS-KEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTA---------------------  114 (274)
T ss_dssp             CCEEECCTT-CHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHH---------------------
T ss_pred             eeEeeeccc-chhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhh---------------------
Confidence            457899999 999999999999999999999999999875433222    222222222                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         249 IDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       249 ~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +.++..+.+.+.+...+.+.  ..+.|+++||.+...+.++...|++||+|+.+|+++++.|++++|||||+|+||+++|
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T  192 (274)
T d2pd4a1         115 MEISVYSLIELTNTLKPLLN--NGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRT  192 (274)
T ss_dssp             HHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             hccccccccccccccccccc--cCcceeeecccccccccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccC
Confidence            44444444444444433221  2245777777777888888999999999999999999999999999999999999999


Q ss_pred             CCCcccccCC--ccccccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         329 PGFENEEKSK--PRETSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       329 ~~~~~~~~~~--~~~~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ++........  ........+++|+++|||||++  .+||+++...+++|-
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~--v~fL~S~~s~~itG~  241 (274)
T d2pd4a1         193 LASSGIADFRMILKWNEINAPLRKNVSLEEVGNA--GMYLLSSLSSGVSGE  241 (274)
T ss_dssp             TTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHH--HHHHHSGGGTTCCSC
T ss_pred             ccccccCchHHHHHHHhhhhhccCCcCHHHHHHH--HHHHhChhhCCCcCc
Confidence            9876544322  2223335688999999999976  567888888888883

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=6.6e-33  Score=268.61  Aligned_cols=229  Identities=18%  Similarity=0.160  Sum_probs=182.5

Q ss_pred             CCCCEEEEecC--CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGG--SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGa--s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+   ++.+..+                       .+.
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~-----------------------~~~   57 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLP-----------------------AKA   57 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTSS-----------------------SCC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHcC-----------------------Cce
Confidence            78999999994  5799999999999999999999999876533   2222221                       446


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhc---CCccEEEEccccccC-----CCcccCCHHHHHHhhhhhhhccccchhhcccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRC---GPVYMLVNCAGMALC-----GTLEEMTMQDIKVMEQPLWLRGYHTRLALWRS  245 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~---g~IDvLVnnAG~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (475)
                      ..+.||++ +.+++.++++.+.+.+   +.||++|||||+...     .++.+.+.+++...                  
T Consensus        58 ~~~~~dv~-~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~------------------  118 (268)
T d2h7ma1          58 PLLELDVQ-NEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKG------------------  118 (268)
T ss_dssp             CEEECCTT-CHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHH------------------
T ss_pred             eeEeeecc-cccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhh------------------
Confidence            67899999 9999999999987764   679999999997632     34566777777776                  


Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCC
Q psy3252         246 WTVIDLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPD  325 (475)
Q Consensus       246 ~~v~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~  325 (475)
                         +++|+.+.+.+.+.+.+.+.   .+.+++++|.....+.|+...|+++|+|+.+|+++++.|++++|||||+|+||.
T Consensus       119 ---~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~  192 (268)
T d2h7ma1         119 ---IHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGP  192 (268)
T ss_dssp             ---HHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred             ---hhhhhhHHHHHHHHHhhhcc---cccccccccccccccCcccchhhccccchhhccccchhhhhccCCcceEEecCC
Confidence               99999999999988776543   245667777778888999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCc------------cccccccccCC-CCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         326 TDTPGFENEEKSKP------------RETSLISQTGG-LYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       326 v~T~~~~~~~~~~~------------~~~~~~~~~~~-~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      |.|++..+......            .......|++| ++.||||+++.  +||+++...+++|-
T Consensus       193 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v--~fL~Sd~a~~iTG~  255 (268)
T d2h7ma1         193 IRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTV--CALLSDWLPATTGD  255 (268)
T ss_dssp             CCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHH--HHHHSSSCTTCCSE
T ss_pred             CCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHH--HHHhCchhcCccCC
Confidence            99997654332211            11112357766 99999999874  57889988888874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=3.7e-31  Score=255.49  Aligned_cols=179  Identities=25%  Similarity=0.331  Sum_probs=153.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh---hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE---KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.+++.+.+                        .++
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g------------------------~~v   64 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG------------------------ART   64 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT------------------------CEE
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcc------------------------ccc
Confidence            46999999999999999999999999 699999974   44566666666544                        679


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.||++ |.++++++++.+.+ .+++|++|||||+....++.+.+.++++.+                     +++|+
T Consensus        65 ~~~~~Dv~-d~~~~~~~~~~i~~-~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~---------------------~~~~~  121 (259)
T d2fr1a1          65 TVAACDVT-DRESVRELLGGIGD-DVPLSAVFHAAATLDDGTVDTLTGERIERA---------------------SRAKV  121 (259)
T ss_dssp             EEEECCTT-CHHHHHHHHHTSCT-TSCEEEEEECCCCCCCCCGGGCCHHHHHHH---------------------THHHH
T ss_pred             cccccccc-hHHHHHHhhccccc-cccccccccccccccccccccccHHHHHHH---------------------hhhhc
Confidence            99999999 99999999998765 468999999999999999999999999988                     99999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCCC
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPGF  331 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~~  331 (475)
                      .|++++.+.    +...+.++||++||+++..+.++++.|+++|+++++|++.+    ...||+|++|+||.+.++++
T Consensus       122 ~g~~~l~~~----~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~~~----~~~Gi~v~~I~pg~~~~~g~  191 (259)
T d2fr1a1         122 LGARNLHEL----TRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGM  191 (259)
T ss_dssp             HHHHHHHHH----HTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHH----HHTTCCCEEEEECCBC----
T ss_pred             cchhHHHHH----hhccCCceEeeecchhhccCCcccHHHHHHHHhHHHHHHHH----HhCCCCEEECCCCcccCCcc
Confidence            999998775    44556789999999999999999999999999998876654    45699999999999987754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=7.6e-31  Score=252.25  Aligned_cols=207  Identities=20%  Similarity=0.282  Sum_probs=152.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+||||||++|||+++|++|+++|++|++++|+.++                                         ..+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------------------------------~~~   40 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------------------------------VIA   40 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------------------------------EEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------------------------------HHH
Confidence            799999999999999999999999999999997431                                         357


Q ss_pred             ecCCCHHHHHHHHHHHHHhc-CCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRC-GPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~-g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      |++ +.+..+....++..+. +.+|++|||||+....       +.+...                     .++|..+..
T Consensus        41 d~~-~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~-------~~~~~~---------------------~~~~~~~~~   91 (257)
T d1fjha_          41 DLS-TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-------KVLGNV---------------------VSVNYFGAT   91 (257)
T ss_dssp             CTT-SHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC-------SSHHHH---------------------HHHHTHHHH
T ss_pred             Hhc-CHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcH-------HHHHHH---------------------HHHHHHHHH
Confidence            888 8888887766665554 5799999999975422       223433                     788999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEecccc---------------------------ccccC-CCChhhHHHHHHHHHHHHHHHH
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQA---------------------------ANLGI-YGLAAYTSSKFALKGFAEALYM  309 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a---------------------------~~~~~-~~~~~Y~aSKaAl~~l~~sLa~  309 (475)
                      .+.+...+.+.+...+.+.++++..                           +..+. ++..+|++||+|+++|+|+||.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~  171 (257)
T d1fjha_          92 ELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAA  171 (257)
T ss_dssp             HHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhcccccccc
Confidence            9999999988876655565555432                           22222 2345799999999999999999


Q ss_pred             HHccCCcEEEEEeCCCCCCCCCcccccCCccc---cccccccCCCCChHHhhhccceeeecCCCCCCCCCc
Q psy3252         310 EVKQSGLTITLCLPPDTDTPGFENEEKSKPRE---TSLISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGF  377 (475)
Q Consensus       310 El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~  377 (475)
                      ||+++|||||+|+||+|+||+++.........   .....|++|+++||||+++.  +||+++..++++|-
T Consensus       172 el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v--~fL~S~~s~~itG~  240 (257)
T d1fjha_         172 AWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVI--AFLMSPAASYVHGA  240 (257)
T ss_dssp             HHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHH--HHHTSGGGTTCCSC
T ss_pred             ccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHH--HHHhCchhCCccCc
Confidence            99999999999999999999987654333222   22245899999999999874  77899998888874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.78  E-value=1.9e-20  Score=172.10  Aligned_cols=154  Identities=15%  Similarity=0.127  Sum_probs=113.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++....                         .
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------------------~   72 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-------------------------K   72 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-------------------------T
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-------------------------c
Confidence            468999999999999999999999999999999999999999999998887653                         3


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +....+|++ +.+++++++       +++|+||||||+.    +...+.++|+..                     +++|
T Consensus        73 ~~~~~~d~~-~~~~~~~~~-------~~iDilin~Ag~g----~~~~~~e~~~~~---------------------~~~n  119 (191)
T d1luaa1          73 VNVTAAETA-DDASRAEAV-------KGAHFVFTAGAIG----LELLPQAAWQNE---------------------SSIE  119 (191)
T ss_dssp             CCCEEEECC-SHHHHHHHT-------TTCSEEEECCCTT----CCCBCHHHHHTC---------------------TTCC
T ss_pred             hhhhhhhcc-cHHHHHHHh-------cCcCeeeecCccc----cccCCHHHHHhh---------------------hcce
Confidence            446789999 888777654       5899999999974    345678888876                     8888


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CCeEEEeccccccccCCCChhhHHHHHHHHHHHH
Q psy3252         253 LYGTIHMTKALVEGMKQRG-RGCIVITASQAANLGIYGLAAYTSSKFALKGFAE  305 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~  305 (475)
                      +.+.++++..+.+.+.... .++++..++..+..+ .+...|+++|+++..|++
T Consensus       120 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         120 IVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             EEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHH-HHHHHHHHHHHHHHHHTS
T ss_pred             eehhHhhHHHHHHHhhhhccCcEEecceEEEeccC-cCcHHHHHHHHHHHHHHh
Confidence            8777766544433332221 122222222212111 123579999999988764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=8.3e-18  Score=168.38  Aligned_cols=174  Identities=13%  Similarity=0.074  Sum_probs=126.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-----HHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-----LLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .|+||||||||.||.+++++|+++|++|++++|....     ++.+..+....                        ..+
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~------------------------~~~   56 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC------------------------NPK   56 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------------------------------CC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhc------------------------CCC
Confidence            3799999999999999999999999999999995432     22222111111                        157


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhh
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLN  252 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN  252 (475)
                      +.++.+|++ |.++++++++..     .+|+++|+|+........    ++....                     +++|
T Consensus        57 ~~~~~~Dl~-d~~~~~~~~~~~-----~~d~v~h~aa~~~~~~~~----~~~~~~---------------------~~~N  105 (357)
T d1db3a_          57 FHLHYGDLS-DTSNLTRILREV-----QPDEVYNLGAMSHVAVSF----ESPEYT---------------------ADVD  105 (357)
T ss_dssp             EEECCCCSS-CHHHHHHHHHHH-----CCSEEEECCCCCTTTTTT----SCHHHH---------------------HHHH
T ss_pred             eEEEEeecC-CHHHHHHHHhcc-----CCCEEEEeecccccchhh----hCHHHH---------------------HHHH
Confidence            899999999 999999998865     789999999986543221    222223                     8999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEeccccccc-----------cCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         253 LYGTIHMTKALVEGMKQRGRGCIVITASQAANL-----------GIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       253 ~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~-----------~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      +.|+.++++++...-. .+..++|++||...+-           +..+...|+.||.+.+.+++.++..   +|+++..+
T Consensus       106 v~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~---~~l~~~il  181 (357)
T d1db3a_         106 AMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRES---YGMYACNG  181 (357)
T ss_dssp             THHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEE
T ss_pred             HHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCCEEEE
Confidence            9999999988754322 2335799999865431           1123568999999999999888876   47999999


Q ss_pred             eCCCCCCCC
Q psy3252         322 LPPDTDTPG  330 (475)
Q Consensus       322 ~PG~v~T~~  330 (475)
                      .|+.|.+|.
T Consensus       182 R~~~vyGp~  190 (357)
T d1db3a_         182 ILFNHESPR  190 (357)
T ss_dssp             EECCEECTT
T ss_pred             EeccccCCC
Confidence            999999984

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.67  E-value=8.1e-16  Score=152.59  Aligned_cols=174  Identities=21%  Similarity=0.178  Sum_probs=128.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .||+||||||+|.||.++++.|+++|++|+.+.|+.++...+..........                      .....+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~----------------------~~~~~~   67 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG----------------------RFETAV   67 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTT----------------------TEEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccc----------------------cccEEE
Confidence            4899999999999999999999999999999999988776665443332221                      334567


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      ..|++ +.+++..++       ..+|+++|+|+....    ..+..   ..                     +.+|+.|+
T Consensus        68 ~~Dl~-~~~~~~~~~-------~~~~~v~~~a~~~~~----~~~~~---~~---------------------~~~nv~gt  111 (342)
T d1y1pa1          68 VEDML-KQGAYDEVI-------KGAAGVAHIASVVSF----SNKYD---EV---------------------VTPAIGGT  111 (342)
T ss_dssp             CSCTT-STTTTTTTT-------TTCSEEEECCCCCSC----CSCHH---HH---------------------HHHHHHHH
T ss_pred             ecccc-chhhhhhhc-------ccchhhhhhcccccc----ccccc---cc---------------------ccchhhhH
Confidence            78999 777665554       368999999986532    12222   22                     77899999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCC-------------------------------CChhhHHHHHHHHHHHH
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIY-------------------------------GLAAYTSSKFALKGFAE  305 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-------------------------------~~~~Y~aSKaAl~~l~~  305 (475)
                      .++++.+...   .+..++|++||..+.....                               ....|+.||.+.+.++.
T Consensus       112 ~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~  188 (342)
T d1y1pa1         112 LNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW  188 (342)
T ss_dssp             HHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhcc---cccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHH
Confidence            9988876432   2346899999976532111                               12369999999999999


Q ss_pred             HHHHHHccCCcEEEEEeCCCCCCCCCc
Q psy3252         306 ALYMEVKQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       306 sLa~El~~~gIrVn~V~PG~v~T~~~~  332 (475)
                      .++.+.. .++++.+|+|+.|.+|.+.
T Consensus       189 ~~~~~~~-~~~~~~~i~p~~v~Gp~~~  214 (342)
T d1y1pa1         189 KFMDENK-PHFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             HHHHHHC-CSSEEEEEEESEEECCCSC
T ss_pred             Hhhhhcc-cccccceecccceeCCCCC
Confidence            8887754 4689999999999887544

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5.4e-16  Score=153.35  Aligned_cols=174  Identities=11%  Similarity=0.050  Sum_probs=123.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-----HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-----KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-----~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |++|||||+|.||.+++++|+++|++|+.++|...     .++.+......                       ....++
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~   58 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-----------------------HIEGNM   58 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC--------------------------------CE
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-----------------------hccCCc
Confidence            44599999999999999999999999999999642     11211111110                       011568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ |.+.+..++...     .+++++++|+......    ..++....                     +++|+
T Consensus        59 ~~~~~Dl~-d~~~~~~~~~~~-----~~~~v~~~~a~~~~~~----~~~~~~~~---------------------~~~Nv  107 (347)
T d1t2aa_          59 KLHYGDLT-DSTCLVKIINEV-----KPTEIYNLGAQSHVKI----SFDLAEYT---------------------ADVDG  107 (347)
T ss_dssp             EEEECCTT-CHHHHHHHHHHH-----CCSEEEECCSCCCHHH----HHHSHHHH---------------------HHHHT
T ss_pred             EEEEeecC-CchhhHHHHhhc-----ccceeeeeeeccccch----hhccchhh---------------------hhhHH
Confidence            89999999 999998888765     6888899988653211    11111222                     78999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      .|+.+++.++...-.. +..++|++||.+.+-.           ..+...|+.||.+.+.++..++..   +|+.+..+.
T Consensus       108 ~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr  183 (347)
T d1t2aa_         108 VGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGI  183 (347)
T ss_dssp             HHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEE
T ss_pred             HHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEE
Confidence            9999999887554322 2357999998764311           113467999999999999888766   578999999


Q ss_pred             CCCCCCCC
Q psy3252         323 PPDTDTPG  330 (475)
Q Consensus       323 PG~v~T~~  330 (475)
                      |+.+.+|.
T Consensus       184 ~~~vyGp~  191 (347)
T d1t2aa_         184 LFNHESPR  191 (347)
T ss_dssp             ECCEECTT
T ss_pred             ecceeCCC
Confidence            99999873

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=2.1e-15  Score=152.00  Aligned_cols=194  Identities=16%  Similarity=0.059  Sum_probs=126.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      |++||||||+|.||.+++++|++.|++|+++|.-...............+.........  ....     ....+++++.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~i~~~~   73 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS--RWKA-----LTGKSIELYV   73 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHH--HHHH-----HHCCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHH--HHHh-----hcCCCcEEEE
Confidence            68999999999999999999999999999997422111111100000000000000000  0000     0004578999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ |.+.++.+++..     .+|+|||.|+..... ....+.+.....                     +++|+.|+.
T Consensus        74 ~Dl~-d~~~l~~~~~~~-----~~d~ViHlAa~~~~~-~s~~~~~~~~~~---------------------~~~Nv~gt~  125 (393)
T d1i24a_          74 GDIC-DFEFLAESFKSF-----EPDSVVHFGEQRSAP-YSMIDRSRAVYT---------------------QHNNVIGTL  125 (393)
T ss_dssp             SCTT-SHHHHHHHHHHH-----CCSEEEECCSCCCHH-HHTSCHHHHHHH---------------------HHHHHHHHH
T ss_pred             ccCC-CHHHHHHHHHhh-----cchheeccccccccc-cccccccccccc---------------------ccccccccc
Confidence            9999 999999988865     799999999875321 112233333333                     899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEecccccccc------------------------CCCChhhHHHHHHHHHHHHHHHHHHcc
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLG------------------------IYGLAAYTSSKFALKGFAEALYMEVKQ  313 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------------------~~~~~~Y~aSKaAl~~l~~sLa~El~~  313 (475)
                      ++++++...-   ....+++.||...+..                        ......|+.||.+.+.+++.++.+   
T Consensus       126 nll~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---  199 (393)
T d1i24a_         126 NVLFAIKEFG---EECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---  199 (393)
T ss_dssp             HHHHHHHHHC---TTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHhc---cccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---
Confidence            9998875432   2245677776654321                        122357999999999999887766   


Q ss_pred             CCcEEEEEeCCCCCCCCCc
Q psy3252         314 SGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       314 ~gIrVn~V~PG~v~T~~~~  332 (475)
                      +|+++.++.|+.|.+|...
T Consensus       200 ~~l~~~~lR~~~v~G~~~~  218 (393)
T d1i24a_         200 WGIRATDLNQGVVYGVKTD  218 (393)
T ss_dssp             HCCEEEEEEECEEECSCCT
T ss_pred             cceeeeecccccccCCCcc
Confidence            5899999999999988543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.8e-15  Score=138.08  Aligned_cols=152  Identities=18%  Similarity=0.201  Sum_probs=108.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      |..|+|+||||||+||.+++++|+++|++|+++.|+.++++..       .                       ...+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-------~-----------------------~~~~~~   50 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------G-----------------------PRPAHV   50 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------S-----------------------CCCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-------c-----------------------cccccc
Confidence            3568999999999999999999999999999999998764311       0                       034678


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+++.++++       ..|++|+++|.......                                .++|..+
T Consensus        51 ~~gD~~-d~~~l~~al~-------~~d~vi~~~g~~~~~~~--------------------------------~~~~~~~   90 (205)
T d1hdoa_          51 VVGDVL-QAADVDKTVA-------GQDAVIVLLGTRNDLSP--------------------------------TTVMSEG   90 (205)
T ss_dssp             EESCTT-SHHHHHHHHT-------TCSEEEECCCCTTCCSC--------------------------------CCHHHHH
T ss_pred             cccccc-chhhHHHHhc-------CCCEEEEEeccCCchhh--------------------------------hhhhHHH
Confidence            999999 9888777654       68999999986422110                                3445555


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCC----hhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGL----AAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~----~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      +.+++++    +++.+-.++|++||.......+..    ..|...|.+.+.+       +...|++.+.|.||.+..
T Consensus        91 ~~~l~~a----a~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~-------l~~~~~~~tiirp~~~~~  156 (205)
T d1hdoa_          91 ARNIVAA----MKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKV-------LRESGLKYVAVMPPHIGD  156 (205)
T ss_dssp             HHHHHHH----HHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHH-------HHHTCSEEEEECCSEEEC
T ss_pred             HHHHHHH----HHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHH-------HHhcCCceEEEecceecC
Confidence            5555444    456666789999987654433222    3456666655443       345799999999998754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=1.5e-15  Score=149.51  Aligned_cols=175  Identities=13%  Similarity=0.068  Sum_probs=124.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh-----HHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK-----KLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~-----~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      |++|||||||.||.++++.|+++|++|+.++|...     +++.+.......                       ....+
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~   58 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-----------------------NKALM   58 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-------------------------------CCE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-----------------------cccce
Confidence            79999999999999999999999999999998532     222111111110                       01568


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|++ +.+.+...++..     ++|++||+|+.......    .++....                     +++|+
T Consensus        59 ~~~~~Di~-~~~~~~~~~~~~-----~~D~Vih~Aa~~~~~~~----~~~p~~~---------------------~~~n~  107 (339)
T d1n7ha_          59 KLHYADLT-DASSLRRWIDVI-----KPDEVYNLAAQSHVAVS----FEIPDYT---------------------ADVVA  107 (339)
T ss_dssp             EEEECCTT-CHHHHHHHHHHH-----CCSEEEECCSCCCHHHH----HHSHHHH---------------------HHHHT
T ss_pred             EEEEcccc-CHHHHHHHHhhh-----ccchhhhcccccccccc----ccCcccc---------------------ccccc
Confidence            89999999 989888887754     89999999997532111    1111222                     88999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CCeEEEecccccccc----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         254 YGTIHMTKALVEGMKQRG-RGCIVITASQAANLG----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      .++..+..++........ ..++++.||......          ......|+.||.+.+.++...+..   +|+.+..+.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR  184 (339)
T d1n7ha_         108 TGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREA---YGLFACNGI  184 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEE
T ss_pred             cccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEE
Confidence            999999988876554432 344555555443221          123568999999999998888766   579999999


Q ss_pred             CCCCCCCC
Q psy3252         323 PPDTDTPG  330 (475)
Q Consensus       323 PG~v~T~~  330 (475)
                      |+.|.+|.
T Consensus       185 ~~~vyGp~  192 (339)
T d1n7ha_         185 LFNHESPR  192 (339)
T ss_dssp             ECCEECTT
T ss_pred             EccccCCC
Confidence            99999984

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.58  E-value=3.5e-15  Score=149.33  Aligned_cols=173  Identities=14%  Similarity=0.099  Sum_probs=124.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEE-EecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      .||||||+|.||.+++++|++.|++|++ +++......  ...+...                      ....+++++.+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~----------------------~~~~~~~~~~~   57 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDI----------------------SESNRYNFEHA   57 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTT----------------------TTCTTEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhh----------------------hhcCCcEEEEc
Confidence            5899999999999999999999997554 554321100  0001000                      01146889999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+.+..+++..     .+|++||+|+......    +.++....                     +++|+.|+.+
T Consensus        58 Dl~-d~~~l~~~~~~~-----~~d~VihlAa~~~~~~----~~~~p~~~---------------------~~~N~~gt~n  106 (361)
T d1kewa_          58 DIC-DSAEITRIFEQY-----QPDAVMHLAAESHVDR----SITGPAAF---------------------IETNIVGTYA  106 (361)
T ss_dssp             CTT-CHHHHHHHHHHH-----CCSEEEECCSCCCHHH----HHHCTHHH---------------------HHHHTHHHHH
T ss_pred             cCC-CHHHHHHHHHhC-----CCCEEEECccccchhh----HHhCHHHH---------------------HHHHHHHHHH
Confidence            999 999888887754     7999999998643211    11111222                     8999999999


Q ss_pred             HHHHHHHHHHhC-----CCCeEEEecccccccc---------------------CCCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         259 MTKALVEGMKQR-----GRGCIVITASQAANLG---------------------IYGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       259 l~~~~lp~m~~~-----~~g~IV~iSS~a~~~~---------------------~~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                      +++.+.......     +..++|++||.+.+-.                     ..+...|+.||.+.+.+++.++..  
T Consensus       107 l~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~--  184 (361)
T d1kewa_         107 LLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT--  184 (361)
T ss_dssp             HHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            999998765532     2357999999775421                     112456999999999999998876  


Q ss_pred             cCCcEEEEEeCCCCCCCC
Q psy3252         313 QSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       313 ~~gIrVn~V~PG~v~T~~  330 (475)
                       +|+++.++.|+.|.+|.
T Consensus       185 -~~i~~~~lR~~~vyGp~  201 (361)
T d1kewa_         185 -YGLPTIVTNCSNNYGPY  201 (361)
T ss_dssp             -HCCCEEEEEECEEESTT
T ss_pred             -hCCCEEEEecCceECcC
Confidence             47999999999999984

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=5.2e-15  Score=146.74  Aligned_cols=169  Identities=17%  Similarity=0.239  Sum_probs=121.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH-HHHHH--HHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK-LLQAQ--EEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~-l~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      |+||||||+|.||.+++++|+++|++|+++++.... .+...  ..+..                          .++.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~--------------------------~~v~~   55 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--------------------------HHIPF   55 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT--------------------------SCCCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcc--------------------------cCCeE
Confidence            789999999999999999999999999998763211 11111  11111                          45778


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.++++.++...     ++|++||+|+.......    .+.....                     +.+|+.|
T Consensus        56 ~~~Dl~-d~~~l~~~~~~~-----~~d~VihlAa~~~~~~~----~~~~~~~---------------------~~~N~~~  104 (347)
T d1z45a2          56 YEVDLC-DRKGLEKVFKEY-----KIDSVIHFAGLKAVGES----TQIPLRY---------------------YHNNILG  104 (347)
T ss_dssp             EECCTT-CHHHHHHHHHHS-----CCCEEEECCSCCCHHHH----HHSHHHH---------------------HHHHHHH
T ss_pred             EEeecC-CHHHHHHHHhcc-----CCCEEEEcccccccccc----ccCcccc---------------------cccchhh
Confidence            899999 999888877643     79999999996532111    1111122                     7899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEecccccccc---------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLG---------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~---------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                      +.++++++...    +..++|++||...+..               ..+...|+.||.+.+.+++.+... ...++.+..
T Consensus       105 t~~ll~~~~~~----~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~~~  179 (347)
T d1z45a2         105 TVVLLELMQQY----NVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNS-DKKSWKFAI  179 (347)
T ss_dssp             HHHHHHHHHHH----TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH-STTSCEEEE
T ss_pred             hHHHHHHHHhc----ccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHh-hccCCcEEE
Confidence            99999988543    3357999999765421               113457999999999998887654 345788888


Q ss_pred             EeCCCCCCC
Q psy3252         321 CLPPDTDTP  329 (475)
Q Consensus       321 V~PG~v~T~  329 (475)
                      +.|+.|..+
T Consensus       180 lR~~~v~g~  188 (347)
T d1z45a2         180 LRYFNPIGA  188 (347)
T ss_dssp             EEECEEECC
T ss_pred             EeecceEee
Confidence            888777654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=5e-15  Score=146.46  Aligned_cols=171  Identities=19%  Similarity=0.216  Sum_probs=124.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .||||||+|.||.++++.|+++|++|++++|...........+.....                       .++.++++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~D   58 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-----------------------KHPTFVEGD   58 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT-----------------------SCCEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcC-----------------------CCCEEEEee
Confidence            499999999999999999999999999998632221111111111100                       457889999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+.+.++++..     ++|++||+|+.....    .+.++....                     +++|+.|+.++
T Consensus        59 l~-d~~~l~~~~~~~-----~~d~ViHlAa~~~~~----~~~~~~~~~---------------------~~~Nv~gt~nl  107 (338)
T d1udca_          59 IR-NEALMTEILHDH-----AIDTVIHFAGLKAVG----ESVQKPLEY---------------------YDNNVNGTLRL  107 (338)
T ss_dssp             TT-CHHHHHHHHHHT-----TCSEEEECCSCCCHH----HHHHCHHHH---------------------HHHHHHHHHHH
T ss_pred             cC-CHHHHHHHHhcc-----CCCEEEECCCccchh----hHHhCHHHH---------------------HHhHHHHHHHH
Confidence            99 988888887753     699999999964211    111222233                     89999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTD  327 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~  327 (475)
                      ++++...    +-.++|++||.+.+.+.            .....|+.+|.+.+.+.+....+  ..++.+..+.|+.|.
T Consensus       108 L~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~  181 (338)
T d1udca_         108 ISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKA--QPDWSIALLRYFNPV  181 (338)
T ss_dssp             HHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--STTCEEEEEEECEEE
T ss_pred             HHHHHHh----CCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHhh--ccCCeEEEEeeccEE
Confidence            9988654    34579999997765322            13568999999999998877666  357899999999998


Q ss_pred             CCC
Q psy3252         328 TPG  330 (475)
Q Consensus       328 T~~  330 (475)
                      ++.
T Consensus       182 G~~  184 (338)
T d1udca_         182 GAH  184 (338)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            874

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.58  E-value=9.2e-15  Score=142.74  Aligned_cols=170  Identities=15%  Similarity=0.091  Sum_probs=121.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+||||||+|.||.+++++|+++|++|+.++|......  ...+.....                      ..++.++.+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~----------------------~~~~~~~~~   56 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGI----------------------EGDIQYEDG   56 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTC----------------------GGGEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcc----------------------cCCcEEEEc
Confidence            68999999999999999999999999999998643211  011111111                      156899999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ |.+.+.+++...     ..++++++|+........+ .   ....                     +.+|+.|+.+
T Consensus        57 Dl~-d~~~~~~~~~~~-----~~~~~~~~a~~~~~~~~~~-~---~~~~---------------------~~~n~~g~~~  105 (321)
T d1rpna_          57 DMA-DACSVQRAVIKA-----QPQEVYNLAAQSFVGASWN-Q---PVTT---------------------GVVDGLGVTH  105 (321)
T ss_dssp             CTT-CHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTT-S---HHHH---------------------HHHHTHHHHH
T ss_pred             ccc-ChHHhhhhhccc-----ccccccccccccccccccc-c---hHHH---------------------HhhhhhchHH
Confidence            999 999888877765     6778888887643221111 1   1222                     8899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEecccccccc------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLG------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      ++.++...-.   ..++++.||.. ..+            ......|+.||.+.+.+++.++.+   +|+++..+.|+.+
T Consensus       106 ~l~~~~~~~~---~~~~i~~Ss~~-~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lr~~~v  178 (321)
T d1rpna_         106 LLEAIRQFSP---ETRFYQASTSE-MFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRES---FGLHASSGILFNH  178 (321)
T ss_dssp             HHHHHHHHCT---TSEEEEEEEGG-GGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCE
T ss_pred             HHHHHHHhCC---Ccccccccchh-hcCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhh---cCCcEEEEEEecc
Confidence            9888754321   23566666543 322            123578999999999999888776   4789999999999


Q ss_pred             CCCC
Q psy3252         327 DTPG  330 (475)
Q Consensus       327 ~T~~  330 (475)
                      .+|.
T Consensus       179 yGp~  182 (321)
T d1rpna_         179 ESPL  182 (321)
T ss_dssp             ECTT
T ss_pred             cCCC
Confidence            8884

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.52  E-value=7.1e-14  Score=137.94  Aligned_cols=178  Identities=13%  Similarity=0.088  Sum_probs=123.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .+-|++|||||+|.||.+++++|.++|++|+.++|....-....+.+.......                   ....+.+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~   74 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-------------------QWSNFKF   74 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH-------------------HHTTEEE
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc-------------------ccCCeeE
Confidence            345799999999999999999999999999999863221111111111111100                   0045788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|.. |........       ...+.++|.++......    ..++....                     +++|+.|
T Consensus        75 ~~~d~~-d~~~~~~~~-------~~~~~v~~~~a~~~~~~----~~~~~~~~---------------------~~~Nv~g  121 (341)
T d1sb8a_          75 IQGDIR-NLDDCNNAC-------AGVDYVLHQAALGSVPR----SINDPITS---------------------NATNIDG  121 (341)
T ss_dssp             EECCTT-SHHHHHHHH-------TTCSEEEECCSCCCHHH----HHHCHHHH---------------------HHHHTHH
T ss_pred             Eeeccc-ccccccccc-------ccccccccccccccccc----cccCccch---------------------hheeehh
Confidence            999999 866544332       36788888887543211    12222333                     8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPP  324 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG  324 (475)
                      +.++++++..    .+..++|++||...+...           .....|+.||.+.+.+++.++..   .++++..+.|+
T Consensus       122 t~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~  194 (341)
T d1sb8a_         122 FLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRC---YGFSTIGLRYF  194 (341)
T ss_dssp             HHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEEC
T ss_pred             HHHHHHHHHh----cCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHH---hCCCeEEEEec
Confidence            9999988753    344689999998765321           13478999999999999988876   47899999999


Q ss_pred             CCCCCCCc
Q psy3252         325 DTDTPGFE  332 (475)
Q Consensus       325 ~v~T~~~~  332 (475)
                      .|.++...
T Consensus       195 ~v~G~~~~  202 (341)
T d1sb8a_         195 NVFGRRQD  202 (341)
T ss_dssp             CEECTTCC
T ss_pred             eeeccCcC
Confidence            99988433

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=8e-14  Score=135.66  Aligned_cols=153  Identities=12%  Similarity=0.087  Sum_probs=115.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .|.||||||+|.||.+|+++|+++|+.|+++++..                                            .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------------------------------~   37 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------------------------------E   37 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------------------------------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------------------------------h
Confidence            36899999999999999999999999988765431                                            1


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|+. +.+.+..+++.-     .+|+++|+|+........   ..+....                     +++|+.|+.
T Consensus        38 ~~~~-~~~~~~~~~~~~-----~~d~v~~~a~~~~~~~~~---~~~~~~~---------------------~~~Nv~gt~   87 (315)
T d1e6ua_          38 LNLL-DSRAVHDFFASE-----RIDQVYLAAAKVGGIVAN---NTYPADF---------------------IYQNMMIES   87 (315)
T ss_dssp             CCTT-CHHHHHHHHHHH-----CCSEEEECCCCCCCHHHH---HHCHHHH---------------------HHHHHHHHH
T ss_pred             cccc-CHHHHHHHHhhc-----CCCEEEEcchhccccccc---hhhHHHH---------------------HHHHHHHHH
Confidence            5788 888888776632     689999999765321111   1111212                     789999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccC----------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEE
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGI----------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLC  321 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V  321 (475)
                      ++++++..    .+-.++|++||.+.+.+.                +....|+.||.+.+.+++.+..+   +|+++..+
T Consensus        88 ~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~il  160 (315)
T d1e6ua_          88 NIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQ---YGRDYRSV  160 (315)
T ss_dssp             HHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHH---HCCEEEEE
T ss_pred             HHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEE
Confidence            99888744    344579999998765321                11346999999999999999877   48999999


Q ss_pred             eCCCCCCCCC
Q psy3252         322 LPPDTDTPGF  331 (475)
Q Consensus       322 ~PG~v~T~~~  331 (475)
                      .|+.|.+|.-
T Consensus       161 R~~~vyGp~~  170 (315)
T d1e6ua_         161 MPTNLYGPHD  170 (315)
T ss_dssp             EECEEESTTC
T ss_pred             eeccEECCCC
Confidence            9999998843

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.49  E-value=3.3e-14  Score=140.75  Aligned_cols=167  Identities=18%  Similarity=0.105  Sum_probs=116.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .|.||||||||.||.+++++|+++|+.|.+++++.  ....  ...+..                       ....++.+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~--~~~~~~-----------------------~~~~~i~~   56 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEA-----------------------ILGDRVEL   56 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGG-----------------------GCSSSEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc--HHHHHH-----------------------hhcCCeEE
Confidence            46899999999999999999999998655544431  0000  000000                       01157899


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+.+..++.       ..|.++|.|+.........    +....                     +++|+.|
T Consensus        57 ~~~Di~-d~~~~~~~~~-------~~~~v~~~a~~~~~~~~~~----~~~~~---------------------~~~N~~g  103 (346)
T d1oc2a_          57 VVGDIA-DAELVDKLAA-------KADAIVHYAAESHNDNSLN----DPSPF---------------------IHTNFIG  103 (346)
T ss_dssp             EECCTT-CHHHHHHHHT-------TCSEEEECCSCCCHHHHHH----CCHHH---------------------HHHHTHH
T ss_pred             EEccCC-CHHHHHHHHh-------hhhhhhhhhhcccccchhh----Ccccc---------------------eeeehHh
Confidence            999999 9888877654       6788999998764321111    11122                     8899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEecccccccc-----------------------CCCChhhHHHHHHHHHHHHHHHHHHc
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLG-----------------------IYGLAAYTSSKFALKGFAEALYMEVK  312 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------------------~~~~~~Y~aSKaAl~~l~~sLa~El~  312 (475)
                      +.+++..+...    + .++|++||...+..                       ..+.+.|+.+|.+.+.+++.++.+  
T Consensus       104 ~~nll~~~~~~----~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~--  176 (346)
T d1oc2a_         104 TYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS--  176 (346)
T ss_dssp             HHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHhhhhhhccc----c-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            99998876443    2 35777777654321                       112357999999999999888776  


Q ss_pred             cCCcEEEEEeCCCCCCCC
Q psy3252         313 QSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       313 ~~gIrVn~V~PG~v~T~~  330 (475)
                       +|+++.++.|+.|.+|.
T Consensus       177 -~~i~~~ilR~~~vyGp~  193 (346)
T d1oc2a_         177 -FGVKATISNCSNNYGPY  193 (346)
T ss_dssp             -HCCEEEEEEECCEESTT
T ss_pred             -cCCCEEEEeecceeCCC
Confidence             48999999999999974

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.8e-14  Score=141.00  Aligned_cols=163  Identities=17%  Similarity=0.142  Sum_probs=112.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+||||||+|.||.+++++|+++|++|+++++....-.+.   +.....                      ..++.....
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~---~~~~~~----------------------~~~~d~~~~   56 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWIG----------------------HENFELINH   56 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGGTT----------------------CTTEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH---HHHhcC----------------------CCceEEEeh
Confidence            7899999999999999999999999999998632111000   000000                      023444545


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |+. +     .       .+..+|++||+|+........ .++   ...                     +++|+.|+.+
T Consensus        57 ~~~-~-----~-------~~~~~d~VihlAa~~~~~~~~-~~~---~~~---------------------~~~Nv~g~~~   98 (312)
T d2b69a1          57 DVV-E-----P-------LYIEVDQIYHLASPASPPNYM-YNP---IKT---------------------LKTNTIGTLN   98 (312)
T ss_dssp             CTT-S-----C-------CCCCCSEEEECCSCCSHHHHT-TCH---HHH---------------------HHHHHHHHHH
T ss_pred             HHH-H-----H-------HHcCCCEEEECcccCCchhHH-hCH---HHH---------------------HHHHHHHHHH
Confidence            544 2     1       123699999999965322111 111   222                     8999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEecccccccc----------------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLG----------------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~----------------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      +++++..    .+ .++|++||.+.+..                ..+...|+.||.+.+.+++.++.+   +|+++..+.
T Consensus        99 ll~~~~~----~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR  170 (312)
T d2b69a1          99 MLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ---EGVEVRVAR  170 (312)
T ss_dssp             HHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEE
T ss_pred             HHHHHHH----cC-CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH---hCCcEEEEE
Confidence            9988643    23 37999999755421                123568999999999999998877   489999999


Q ss_pred             CCCCCCCCCc
Q psy3252         323 PPDTDTPGFE  332 (475)
Q Consensus       323 PG~v~T~~~~  332 (475)
                      |+.|.+|...
T Consensus       171 ~~~vyGp~~~  180 (312)
T d2b69a1         171 IFNTFGPRMH  180 (312)
T ss_dssp             ECCEECTTCC
T ss_pred             eeeEECCCCC
Confidence            9999998543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=3.4e-14  Score=140.07  Aligned_cols=163  Identities=15%  Similarity=0.093  Sum_probs=116.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      +||||||+|.||.+++++|+++|. +|+++++.........+                             ..++.++.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~-----------------------------~~~~~~i~~   52 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-----------------------------HPHFHFVEG   52 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-----------------------------CTTEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc-----------------------------CCCeEEEEC
Confidence            589999999999999999999995 89999886543322110                             046889999


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHH
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIH  258 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~  258 (475)
                      |++ +.+++.+.+.   +   .+|++||+|+........    ++....                     +++|+.|+.+
T Consensus        53 Di~-~~~~~~~~~~---~---~~d~Vih~a~~~~~~~~~----~~~~~~---------------------~~~nv~gt~~  100 (342)
T d2blla1          53 DIS-IHSEWIEYHV---K---KCDVVLPLVAIATPIEYT----RNPLRV---------------------FELDFEENLR  100 (342)
T ss_dssp             CTT-TCSHHHHHHH---H---HCSEEEECBCCCCHHHHH----HSHHHH---------------------HHHHTHHHHH
T ss_pred             ccC-ChHHHHHHHH---h---CCCccccccccccccccc----cCCccc---------------------cccccccccc
Confidence            999 6555444221   1   589999999975432111    111222                     8899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEeccccccccCC------------------CChhhHHHHHHHHHHHHHHHHHHccCCcEEEE
Q psy3252         259 MTKALVEGMKQRGRGCIVITASQAANLGIY------------------GLAAYTSSKFALKGFAEALYMEVKQSGLTITL  320 (475)
Q Consensus       259 l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~------------------~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~  320 (475)
                      +++++..    . ..+++++||...+....                  ....|+.||.+.+.+++.++..   +|+++..
T Consensus       101 ll~~~~~----~-~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i  172 (342)
T d2blla1         101 IIRYCVK----Y-RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTL  172 (342)
T ss_dssp             HHHHHHH----T-TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH---HCCCEEE
T ss_pred             ccccccc----c-cccccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhhcc---cCceeEE
Confidence            9998743    2 24567777765543211                  1357999999999999988877   4899999


Q ss_pred             EeCCCCCCCCC
Q psy3252         321 CLPPDTDTPGF  331 (475)
Q Consensus       321 V~PG~v~T~~~  331 (475)
                      +.|+.+.++..
T Consensus       173 ~r~~~~~g~~~  183 (342)
T d2blla1         173 FRPFNWMGPRL  183 (342)
T ss_dssp             EEECSEECSSC
T ss_pred             eeccccccccc
Confidence            99999988743

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.47  E-value=1.5e-13  Score=135.75  Aligned_cols=176  Identities=15%  Similarity=0.097  Sum_probs=128.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++||+||||||+|.||.++++.|+++|++|++++|+........+....                         ...+++
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-------------------------~~~i~~   60 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV-------------------------ADGMQS   60 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT-------------------------TTTSEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc-------------------------ccCCeE
Confidence            5799999999999999999999999999999999986554333222110                         035788


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|++ |.+.+.++++..     .+|+++|.|+......    +.+.....                     +++|+.|
T Consensus        61 ~~~Dl~-d~~~l~~~~~~~-----~~~~v~~~aa~~~~~~----~~~~~~~~---------------------~~~Nv~g  109 (356)
T d1rkxa_          61 EIGDIR-DQNKLLESIREF-----QPEIVFHMAAQPLVRL----SYSEPVET---------------------YSTNVMG  109 (356)
T ss_dssp             EECCTT-CHHHHHHHHHHH-----CCSEEEECCSCCCHHH----HHHCHHHH---------------------HHHHTHH
T ss_pred             EEeecc-ChHhhhhhhhhc-----hhhhhhhhhccccccc----cccCCccc---------------------ccccccc
Confidence            999999 999888887755     7899999998653211    11222223                     8899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEecccccccc------------CCCChhhHHHHHHHHHHHHHHHHHHc------cCCcE
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLG------------IYGLAAYTSSKFALKGFAEALYMEVK------QSGLT  317 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------~~~~~~Y~aSKaAl~~l~~sLa~El~------~~gIr  317 (475)
                      +.++++++...   .....+++.||......            ..+...|+.+|.+.+.+++.++.++.      .+++.
T Consensus       110 ~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~  186 (356)
T d1rkxa_         110 TVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTA  186 (356)
T ss_dssp             HHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCE
T ss_pred             chhhhhhhhcc---ccccccccccccccccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCce
Confidence            99998887542   22344555555443321            11345799999999999999888764      35789


Q ss_pred             EEEEeCCCCCCCC
Q psy3252         318 ITLCLPPDTDTPG  330 (475)
Q Consensus       318 Vn~V~PG~v~T~~  330 (475)
                      +..+.|+.+.+|.
T Consensus       187 ~~~~r~~~vyGp~  199 (356)
T d1rkxa_         187 VATVRAGNVIGGG  199 (356)
T ss_dssp             EEEEECCCEECTT
T ss_pred             EEeccCCCeeCCC
Confidence            9999999998874

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.46  E-value=9.6e-14  Score=128.12  Aligned_cols=174  Identities=17%  Similarity=0.057  Sum_probs=108.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCE--EEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAH--VTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~--Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++||||||+|+||.++++.|+++|+.  |+...|++++.+...                               ..++++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~-------------------------------~~~~~~   52 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG-------------------------------GEADVF   52 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT-------------------------------CCTTEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc-------------------------------CCcEEE
Confidence            59999999999999999999999974  566778876543211                               345688


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|++ +.+++.++++       .+|.+||+|+..............            ...............+|+.++
T Consensus        53 ~~d~~-~~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~  112 (252)
T d2q46a1          53 IGDIT-DADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKG------------GRPEFIFEDGQYPEQVDWIGQ  112 (252)
T ss_dssp             ECCTT-SHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSC------------CCCCEECCTTCSHHHHTTHHH
T ss_pred             Eeeec-cccccccccc-------cceeeEEEEeeccccccccchhhh------------hhcccccccchhhhccccccc
Confidence            99999 8887776654       689999999875432111100000            000000111122378889898


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHH-HHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFA-LKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaA-l~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ..++......    ..+...+.++.....+......|..++.. ...+...+   ....|+++..++||.+.++.
T Consensus       113 ~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ilRp~~v~g~~  180 (252)
T d2q46a1         113 KNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY---LADSGTPYTIIRAGGLLDKE  180 (252)
T ss_dssp             HHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH---HHHSSSCEEEEEECEEECSC
T ss_pred             eeeccccccc----cccccccccccccCCCCcccccccccchhhhhhhhhhh---hhcccccceeecceEEECCC
Confidence            8877665433    44678888876665443333222222221 11122222   33478999999999998873

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.45  E-value=6e-13  Score=129.78  Aligned_cols=165  Identities=18%  Similarity=0.164  Sum_probs=113.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCh--hHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE--KKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      .||||||+|.||.++++.|+++|++|+++++-.  ...+. ...+...                         .+++++.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~-~~~~~~~-------------------------~~~~~i~   55 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN-LHWLSSL-------------------------GNFEFVH   55 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHH-HHHHHTT-------------------------CCCEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhH-HHHhhcc-------------------------CCcEEEE
Confidence            589999999999999999999999999987522  12111 2222211                         4678999


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      +|++ +.+++.++++..     .+|++||+|+......    ..++....                     +++|+.|+.
T Consensus        56 ~Di~-~~~~l~~~~~~~-----~~d~Vih~aa~~~~~~----~~~~~~~~---------------------~~~Nv~gt~  104 (338)
T d1orra_          56 GDIR-NKNDVTRLITKY-----MPDSCFHLAGQVAMTT----SIDNPCMD---------------------FEINVGGTL  104 (338)
T ss_dssp             CCTT-CHHHHHHHHHHH-----CCSEEEECCCCCCHHH----HHHCHHHH---------------------HHHHHHHHH
T ss_pred             cccC-CHHHHHHHHHhc-----CCceEEeecccccccc----cccChHHH---------------------HHHHHHHHH
Confidence            9999 999998888765     6899999998753211    11112222                     889999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEeccccccccC----------------------------CCChhhHHHHHHHHHHHHHHHH
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLGI----------------------------YGLAAYTSSKFALKGFAEALYM  309 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------------------------~~~~~Y~aSKaAl~~l~~sLa~  309 (475)
                      ++++++...    +..+.|++||..+..+.                            .....|+.+|...+.+......
T Consensus       105 nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~  180 (338)
T d1orra_         105 NLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR  180 (338)
T ss_dssp             HHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhcc----cccccccccccccccccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhh
Confidence            999876543    33446666665543322                            1346899999999998888777


Q ss_pred             HHccCCcEEEEEeCCCCCC
Q psy3252         310 EVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       310 El~~~gIrVn~V~PG~v~T  328 (475)
                      .+   ++....+.|..+..
T Consensus       181 ~~---~~~~~~~~~~~~~~  196 (338)
T d1orra_         181 IF---GLNTVVFRHSSMYG  196 (338)
T ss_dssp             HH---CCEEEEEEECCEEC
T ss_pred             cc---Ccccccccccceee
Confidence            75   45555555544443

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3.2e-13  Score=133.28  Aligned_cols=172  Identities=19%  Similarity=0.252  Sum_probs=120.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------hhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD------EKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .|+||||||+|.||.+++++|+++|++|+++++.      ........+.+.....                       .
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~   58 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG-----------------------R   58 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT-----------------------C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcC-----------------------C
Confidence            3789999999999999999999999999998741      1111111122211111                       4


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhh
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDL  251 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v  251 (475)
                      ++.++.+|++ |.+.+..++..     ..+|+++|.|+......    ..++....                     +++
T Consensus        59 ~~~~~~~Dl~-d~~~l~~~~~~-----~~~~~i~h~Aa~~~~~~----~~~~p~~~---------------------~~~  107 (346)
T d1ek6a_          59 SVEFEEMDIL-DQGALQRLFKK-----YSFMAVIHFAGLKAVGE----SVQKPLDY---------------------YRV  107 (346)
T ss_dssp             CCEEEECCTT-CHHHHHHHHHH-----CCEEEEEECCSCCCHHH----HHHCHHHH---------------------HHH
T ss_pred             CcEEEEeecc-ccccccccccc-----cccccccccccccCcHh----hHhCHHHH---------------------HHh
Confidence            6789999999 99988887764     37889999999753211    11112222                     889


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccC------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEE
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGI------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTIT  319 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn  319 (475)
                      |+.|+.++++++.    +.+-.++|++||.......            .....|+.+|.+.+...+.++..  ..|+...
T Consensus       108 Nv~gt~~l~~~~~----~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~  181 (346)
T d1ek6a_         108 NLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAV  181 (346)
T ss_dssp             HHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEE
T ss_pred             hhcccccccchhh----hcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceE
Confidence            9999999888764    3444579998887554321            13457999999998888776543  4578888


Q ss_pred             EEeCCCCCCC
Q psy3252         320 LCLPPDTDTP  329 (475)
Q Consensus       320 ~V~PG~v~T~  329 (475)
                      .+.|+.+.++
T Consensus       182 ~lR~~~v~G~  191 (346)
T d1ek6a_         182 LLRYFNPTGA  191 (346)
T ss_dssp             EEEECEEECC
T ss_pred             EEeecceecc
Confidence            8989888876

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=6.3e-14  Score=131.37  Aligned_cols=160  Identities=12%  Similarity=0.108  Sum_probs=113.1

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      ..+.+++|+||||||||.||.+++++|+++|.  +|++++|++.....                              ..
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------------------------------~~   57 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------------------------------EA   57 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------------------------------GG
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------------------------------cc
Confidence            34567889999999999999999999999996  79999997532210                              01


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ...+....+|+. +.+++..       .+..+|++||++|....       .......                     .
T Consensus        58 ~~~i~~~~~D~~-~~~~~~~-------~~~~~d~vi~~~~~~~~-------~~~~~~~---------------------~  101 (232)
T d2bkaa1          58 YKNVNQEVVDFE-KLDDYAS-------AFQGHDVGFCCLGTTRG-------KAGAEGF---------------------V  101 (232)
T ss_dssp             GGGCEEEECCGG-GGGGGGG-------GGSSCSEEEECCCCCHH-------HHHHHHH---------------------H
T ss_pred             cceeeeeeeccc-ccccccc-------ccccccccccccccccc-------ccchhhh---------------------h
Confidence            145666777887 6554433       34579999999985421       1112222                     7


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCc-EEEEEeCCCCCC
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL-TITLCLPPDTDT  328 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gI-rVn~V~PG~v~T  328 (475)
                      ++|+.++..+++.+.    +.+-.++|++||......  ....|+.+|...+...       ...|. ++..+.||.+.+
T Consensus       102 ~~~~~~~~~~~~~a~----~~~v~~fi~~Ss~~~~~~--~~~~Y~~~K~~~E~~l-------~~~~~~~~~IlRP~~i~G  168 (232)
T d2bkaa1         102 RVDRDYVLKSAELAK----AGGCKHFNLLSSKGADKS--SNFLYLQVKGEVEAKV-------EELKFDRYSVFRPGVLLC  168 (232)
T ss_dssp             HHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHH-------HTTCCSEEEEEECCEEEC
T ss_pred             hhcccccceeeeccc----ccCccccccCCccccccC--ccchhHHHHHHhhhcc-------ccccccceEEecCceeec
Confidence            789999999888764    345568999999876532  3457999998777543       23344 578899999998


Q ss_pred             CC
Q psy3252         329 PG  330 (475)
Q Consensus       329 ~~  330 (475)
                      +.
T Consensus       169 ~~  170 (232)
T d2bkaa1         169 DR  170 (232)
T ss_dssp             TT
T ss_pred             CC
Confidence            73

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.45  E-value=3e-13  Score=134.37  Aligned_cols=264  Identities=15%  Similarity=0.058  Sum_probs=164.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++..||||||+|.||.+++++|+++|++|+++++....-.                              ........+.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------------------------------~~~~~~~~~~   63 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------------------------------TEDMFCDEFH   63 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------------------------------CGGGTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------------------------------hhhcccCcEE
Confidence            4567999999999999999999999999999987532100                              0000334577


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHH
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGT  256 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~  256 (475)
                      .+|+. +.+.+..+++       .+|++||.|+............   ...                     +.+|+.++
T Consensus        64 ~~D~~-~~~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~---~~~---------------------~~~n~~gt  111 (363)
T d2c5aa1          64 LVDLR-VMENCLKVTE-------GVDHVFNLAADMGGMGFIQSNH---SVI---------------------MYNNTMIS  111 (363)
T ss_dssp             ECCTT-SHHHHHHHHT-------TCSEEEECCCCCCCHHHHTTCH---HHH---------------------HHHHHHHH
T ss_pred             Eeech-hHHHHHHHhh-------cCCeEeeccccccccccccccc---ccc---------------------cccccchh
Confidence            88998 8776655443       6899999998764322212222   222                     78899999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEeccccccccC------------------CCChhhHHHHHHHHHHHHHHHHHHccCCcEE
Q psy3252         257 IHMTKALVEGMKQRGRGCIVITASQAANLGI------------------YGLAAYTSSKFALKGFAEALYMEVKQSGLTI  318 (475)
Q Consensus       257 ~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~------------------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrV  318 (475)
                      .+++.++..    .+..++|++||...+...                  .....|+.||.+.+.+++.+..+   +|+++
T Consensus       112 ~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~---~gl~~  184 (363)
T d2c5aa1         112 FNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKD---FGIEC  184 (363)
T ss_dssp             HHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHH---HCCEE
T ss_pred             hHHHHhHHh----hCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCE
Confidence            998888754    344679999997664311                  12457999999999999888776   48999


Q ss_pred             EEEeCCCCCCCCCcccccCCccc-------------ccc---ccccCCCCChHHhhhccceeeecCCCCCCCCCcccccc
Q psy3252         319 TLCLPPDTDTPGFENEEKSKPRE-------------TSL---ISQTGGLYRPEVVKQSGLTITLCLPPDTDTPGFENEEK  382 (475)
Q Consensus       319 n~V~PG~v~T~~~~~~~~~~~~~-------------~~~---~~~~~~~~~pe~va~~~~~~~~~~~~~~~~~g~~~~~~  382 (475)
                      ..+.|+.+.++.-..........             ...   ..+...+..-+|++++.+.+. ..+.    ++..    
T Consensus       185 ~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~-~~~~----~~~~----  255 (363)
T d2c5aa1         185 RIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT-KSDF----REPV----  255 (363)
T ss_dssp             EEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH-HSSC----CSCE----
T ss_pred             EEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH-hCCC----CCeE----
Confidence            99999999987432111111000             000   011223566677877755443 2211    1111    


Q ss_pred             CCCcccccccCCCCCCChHHHHHHHHHHHhcCCeeEEeC---------chhHHHHHHhcCCcchhhHHHHHHHH
Q psy3252         383 SKPRETSLISQTGGLYRPEVVAKQLLEDALKGNYFSTVG---------LESYLITTLCAGFSPIVSIQETFIQA  447 (475)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~e~vA~~i~~ai~~g~~~~~~~---------~~~~~~~~~~~~~~P~~~~~~~~~~~  447 (475)
                             .+. ....++..++++.+.+.+.+.......+         .+...+...+ ++-|..+|.+.+.+.
T Consensus       256 -------ni~-~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~L-Gw~p~~sleegi~~t  320 (363)
T d2c5aa1         256 -------NIG-SDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKL-GWAPNMRLKEGLRIT  320 (363)
T ss_dssp             -------EEC-CCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHH-SCCCCCCHHHHHHHH
T ss_pred             -------EEe-cCCcccHHHHHHHHHHHhCCCCceEeCCCCCCccccccCHHHHHHHh-CCCCCCCHHHHHHHH
Confidence                   111 2346788999998887665433222221         1233334433 777866777666553

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.40  E-value=2.7e-12  Score=128.55  Aligned_cols=180  Identities=16%  Similarity=0.144  Sum_probs=124.6

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCEEEEEec---------ChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAK-RGAHVTIVAR---------DEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~-~Ga~Vvl~~R---------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .||||||+|.||.+++++|++ .|++|+++|+         ..+..+.....+......                .....
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~   67 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP----------------KPPWA   67 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSS----------------CCTTT
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccc----------------ccccc
Confidence            689999999999999999986 6899999874         122233333333332211                01111


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhh
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVI  249 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (475)
                      ...+.++.+|++ |.+.++++++.    +.++|++||.|+........    +.....                     +
T Consensus        68 ~~~~~~~~~Di~-d~~~l~~~~~~----~~~~d~ViH~Aa~~~~~~~~----~~~~~~---------------------~  117 (383)
T d1gy8a_          68 DRYAALEVGDVR-NEDFLNGVFTR----HGPIDAVVHMCAFLAVGESV----RDPLKY---------------------Y  117 (383)
T ss_dssp             TCCCEEEESCTT-CHHHHHHHHHH----SCCCCEEEECCCCCCHHHHH----HCHHHH---------------------H
T ss_pred             ccceEEEECccc-CHHHhhhhhhc----cceeehhhcccccccccccc----cccccc---------------------c
Confidence            245788999999 98887777653    46799999999975432111    111122                     7


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEecccccccc------------------CCCChhhHHHHHHHHHHHHHHHHHH
Q psy3252         250 DLNLYGTIHMTKALVEGMKQRGRGCIVITASQAANLG------------------IYGLAAYTSSKFALKGFAEALYMEV  311 (475)
Q Consensus       250 ~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------------~~~~~~Y~aSKaAl~~l~~sLa~El  311 (475)
                      ++|+.++..++.++..    .+..++++++|......                  ..+...|+.||.+.+.+++.+... 
T Consensus       118 ~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~-  192 (383)
T d1gy8a_         118 DNNVVGILRLLQAMLL----HKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA-  192 (383)
T ss_dssp             HHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH-
T ss_pred             ccccccccccchhhhc----cCCcccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH-
Confidence            8999999999888753    34456777776554321                  112567999999999999888665 


Q ss_pred             ccCCcEEEEEeCCCCCCCCCc
Q psy3252         312 KQSGLTITLCLPPDTDTPGFE  332 (475)
Q Consensus       312 ~~~gIrVn~V~PG~v~T~~~~  332 (475)
                        +|+.+.++.|+.+.+|...
T Consensus       193 --~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         193 --YGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             --HCCEEEEEEECEEECCCTT
T ss_pred             --hCCCEEEEecceeeccCcc
Confidence              5899999999999988644

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.40  E-value=9e-13  Score=128.93  Aligned_cols=167  Identities=19%  Similarity=0.130  Sum_probs=116.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEE------EEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHV------TIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~V------vl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .||||||+|.||.++++.|+++|++|      +..+........  ..+....                      ...++
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~----------------------~~~~~   57 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVD----------------------ADPRL   57 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGT----------------------TCTTE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhh----------------------cCCCe
Confidence            58999999999999999999999754      334322110000  0000000                      01468


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhH
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNL  253 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~  253 (475)
                      .++.+|.+ +.......       ....|++||+|+...........    ..                     .+++|+
T Consensus        58 ~~~~~d~~-~~~~~~~~-------~~~~d~vi~~a~~~~~~~~~~~~----~~---------------------~~~~N~  104 (322)
T d1r6da_          58 RFVHGDIR-DAGLLARE-------LRGVDAIVHFAAESHVDRSIAGA----SV---------------------FTETNV  104 (322)
T ss_dssp             EEEECCTT-CHHHHHHH-------TTTCCEEEECCSCCCHHHHHHCC----HH---------------------HHHHHT
T ss_pred             EEEEeccc-cchhhhcc-------ccccceEEeecccccccccccch----HH---------------------HhhhhH
Confidence            89999999 87655533       34789999999875322111111    11                     288999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEe
Q psy3252         254 YGTIHMTKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCL  322 (475)
Q Consensus       254 ~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~  322 (475)
                      .|+.++++++..    .+..++|++||.+.+.+.           .+...|+.||.+.+.+++.++++   +|+++..+.
T Consensus       105 ~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR  177 (322)
T d1r6da_         105 QGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRT---YGLDVRITR  177 (322)
T ss_dssp             HHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEE
T ss_pred             HHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEE
Confidence            999999988753    345689999998765332           23468999999999999999876   489999999


Q ss_pred             CCCCCCCC
Q psy3252         323 PPDTDTPG  330 (475)
Q Consensus       323 PG~v~T~~  330 (475)
                      |+.|.+|.
T Consensus       178 ~~~vyGp~  185 (322)
T d1r6da_         178 CCNNYGPY  185 (322)
T ss_dssp             ECEEECTT
T ss_pred             eeeEECcC
Confidence            99999984

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.19  E-value=3.7e-11  Score=110.10  Aligned_cols=149  Identities=13%  Similarity=0.136  Sum_probs=100.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      -|++|||||||.||.+++++|+++|+  +|++..|+...          ..                        .+   
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~------------------------~~---   44 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EH------------------------PR---   44 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CC------------------------TT---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hc------------------------cc---
Confidence            37999999999999999999999998  66666665311          00                        11   


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +..++. |..++.   +   ...+.+|.+|+++|......   ...+   ..                     .++|+.+
T Consensus        45 ~~~~~~-d~~~~~---~---~~~~~~d~vi~~~g~~~~~~---~~~~---~~---------------------~~~~~~~   90 (212)
T d2a35a1          45 LDNPVG-PLAELL---P---QLDGSIDTAFCCLGTTIKEA---GSEE---AF---------------------RAVDFDL   90 (212)
T ss_dssp             EECCBS-CHHHHG---G---GCCSCCSEEEECCCCCHHHH---SSHH---HH---------------------HHHHTHH
T ss_pred             cccccc-chhhhh---h---ccccchheeeeeeeeecccc---cccc---cc---------------------ccchhhh
Confidence            344555 543321   1   22357899999998653211   1111   12                     7789999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCc-EEEEEeCCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGL-TITLCLPPDTDTPG  330 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gI-rVn~V~PG~v~T~~  330 (475)
                      +.++++++    ++.+-.++|++||..+..  .....|..+|...+.+.       ...+. +++.+.|+.|..+.
T Consensus        91 ~~~~~~~a----~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~~l-------~~~~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1          91 PLAVGKRA----LEMGARHYLVVSALGADA--KSSIFYNRVKGELEQAL-------QEQGWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             HHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHH-------TTSCCSEEEEEECCSEESTT
T ss_pred             hhhccccc----cccccccccccccccccc--ccccchhHHHHHHhhhc-------cccccccceeeCCcceeCCc
Confidence            98888876    344557899999976643  23567999998766543       33454 68889999998874

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.14  E-value=4.3e-11  Score=114.64  Aligned_cols=150  Identities=13%  Similarity=0.136  Sum_probs=95.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH--H--HHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL--Q--AQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~--~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++||||||+|.||.+++++|+++|++|+++.|+.....  .  ....+..                          ..+.
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~--------------------------~~v~   57 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ--------------------------LGAK   57 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT--------------------------TTCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhcc--------------------------CCcE
Confidence            35999999999999999999999999999999753221  1  1111111                          3477


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHH
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLY  254 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~  254 (475)
                      ++.+|++ |.+.+.+.+.       ..+.++++++...                                    ...|..
T Consensus        58 ~v~~d~~-d~~~~~~~~~-------~~~~~~~~~~~~~------------------------------------~~~~~~   93 (312)
T d1qyda_          58 LIEASLD-DHQRLVDALK-------QVDVVISALAGGV------------------------------------LSHHIL   93 (312)
T ss_dssp             EECCCSS-CHHHHHHHHT-------TCSEEEECCCCSS------------------------------------SSTTTT
T ss_pred             EEEeecc-cchhhhhhcc-------Ccchhhhhhhhcc------------------------------------cccchh
Confidence            8899999 8877766554       6788998887532                                    223333


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEeccccccccC-----CCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         255 GTIHMTKALVEGMKQRGRGCIVITASQAANLGI-----YGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       255 g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      +...++.++    .+.+..++|+.||.......     .....|..+|..+..+       ....|+.++.+.||.+..+
T Consensus        94 ~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~r~~~~~g~  162 (312)
T d1qyda_          94 EQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRA-------IEAASIPYTYVSSNMFAGY  162 (312)
T ss_dssp             THHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHH-------HHHTTCCBCEEECCEEHHH
T ss_pred             hhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHh-------hcccccceEEeccceeecC
Confidence            333444443    33344567777775433221     1223455555444332       2346788899999988654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.11  E-value=1.2e-10  Score=110.36  Aligned_cols=143  Identities=15%  Similarity=0.215  Sum_probs=99.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .||||||||.||.+++++|.++|++|+.++|+.                                             +|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------------------------------~D   37 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------------------------------LD   37 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------------------------------CC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------------------------------cc
Confidence            489999999999999999999999999998742                                             48


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.++++++++..     .+|++||+|+.......    ....+..                     +..|+.....+
T Consensus        38 ~~-d~~~~~~~l~~~-----~~d~vih~a~~~~~~~~----~~~~~~~---------------------~~~n~~~~~~~   86 (281)
T d1vl0a_          38 IT-NVLAVNKFFNEK-----KPNVVINCAAHTAVDKC----EEQYDLA---------------------YKINAIGPKNL   86 (281)
T ss_dssp             TT-CHHHHHHHHHHH-----CCSEEEECCCCCCHHHH----HHCHHHH---------------------HHHHTHHHHHH
T ss_pred             CC-CHHHHHHHHHHc-----CCCEEEeeccccccccc----cccchhh---------------------ccccccccccc
Confidence            88 989888887755     78999999986532111    1111112                     66777777776


Q ss_pred             HHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCC
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDT  328 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T  328 (475)
                      .......     ...++++||......           ......|+.+|.+.+.+.+.       .+.++..+.|+.|.+
T Consensus        87 ~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG  154 (281)
T d1vl0a_          87 AAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYG  154 (281)
T ss_dssp             HHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH-------HCSSEEEEEECSEES
T ss_pred             ccccccc-----cccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHH-------hCCCccccceeEEeC
Confidence            6655332     234666665433211           22356799999877665432       356788899999988


Q ss_pred             CC
Q psy3252         329 PG  330 (475)
Q Consensus       329 ~~  330 (475)
                      +.
T Consensus       155 ~~  156 (281)
T d1vl0a_         155 DG  156 (281)
T ss_dssp             SS
T ss_pred             CC
Confidence            74

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.01  E-value=5.4e-14  Score=126.33  Aligned_cols=48  Identities=23%  Similarity=0.422  Sum_probs=43.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCC
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACP  147 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~  147 (475)
                      ++.|+||+|+||.++|+.|+++|++|++++|++++++++.+++.....
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~   49 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG   49 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence            466888889999999999999999999999999999999999987654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.96  E-value=9e-10  Score=104.34  Aligned_cols=155  Identities=15%  Similarity=0.140  Sum_probs=94.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH--HHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ--AQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      .|+||||||||.||.+++++|+++|++|++++|+......  ....+.....                       ..+.+
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-----------------------~~~~~   59 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA-----------------------SGANI   59 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT-----------------------TTCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc-----------------------CCcEE
Confidence            4689999999999999999999999999999997543211  1111211110                       34667


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      +.+|+. +.......++       ..|.+|++++....                                        .+
T Consensus        60 ~~~d~~-~~~~~~~~~~-------~~~~vi~~~~~~~~----------------------------------------~~   91 (307)
T d1qyca_          60 VHGSID-DHASLVEAVK-------NVDVVISTVGSLQI----------------------------------------ES   91 (307)
T ss_dssp             ECCCTT-CHHHHHHHHH-------TCSEEEECCCGGGS----------------------------------------GG
T ss_pred             EEeecc-cchhhhhhhh-------hceeeeeccccccc----------------------------------------ch
Confidence            889999 8777666654       67899998874321                                        01


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTPG  330 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~~  330 (475)
                      ...+.+++    ...+...+++.||............+...+...........   ...|+.++.+.|+.+..+.
T Consensus        92 ~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~r~~~v~g~~  159 (307)
T d1qyca_          92 QVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAI---EAEGIPYTYVSSNCFAGYF  159 (307)
T ss_dssp             GHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHH---HHHTCCBEEEECCEEHHHH
T ss_pred             hhHHHHHH----HHhccccceeeeccccccccccccccccccccccccccchh---hccCCCceecccceecCCC
Confidence            11122222    22234557777775544433333344444443333333322   3357888899999887653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.94  E-value=1.5e-09  Score=103.08  Aligned_cols=128  Identities=16%  Similarity=0.147  Sum_probs=89.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .||||||+|.||.++++.|.+.|. ++.++++...                                         +.+|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------------------------------------~~~D   39 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------------------------------------FCGD   39 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------------------------------------SCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------------------------------------ccCc
Confidence            489999999999999999999985 4445543210                                         2469


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHHHH
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTIHM  259 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~~l  259 (475)
                      ++ |.+.++++++..     .+|+|||+||........+ .+   ...                     +++|+.++..+
T Consensus        40 l~-~~~~~~~~i~~~-----~~D~Vih~Aa~~~~~~~~~-~~---~~~---------------------~~~n~~~~~~l   88 (298)
T d1n2sa_          40 FS-NPKGVAETVRKL-----RPDVIVNAAAHTAVDKAES-EP---ELA---------------------QLLNATSVEAI   88 (298)
T ss_dssp             TT-CHHHHHHHHHHH-----CCSEEEECCCCCCHHHHTT-CH---HHH---------------------HHHHTHHHHHH
T ss_pred             CC-CHHHHHHHHHHc-----CCCEEEEeccccccccccc-Cc---ccc---------------------ccccccccccc
Confidence            99 999888888765     6899999999764322211 11   112                     88999999998


Q ss_pred             HHHHHHHHHhCCCCeEEEeccccccccC-----------CCChhhHHHHHHHHHHHH
Q psy3252         260 TKALVEGMKQRGRGCIVITASQAANLGI-----------YGLAAYTSSKFALKGFAE  305 (475)
Q Consensus       260 ~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----------~~~~~Y~aSKaAl~~l~~  305 (475)
                      ..++.     ....+++++||.....+.           .....|+.+|.+.+.+.+
T Consensus        89 ~~~~~-----~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_          89 AKAAN-----ETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             HHHHT-----TTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             hhhhh-----ccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHH
Confidence            88762     233567777776543221           134689999988776543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.93  E-value=8.7e-09  Score=101.02  Aligned_cols=150  Identities=16%  Similarity=0.121  Sum_probs=96.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +.|+|+||||||.||.+++++|+++|++|+++.|+.++...  ..+...                         ..++.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~-------------------------~~v~~~   54 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAI-------------------------PNVTLF   54 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTS-------------------------TTEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhccc-------------------------CCCEEE
Confidence            36899999999999999999999999999999998765432  122211                         357889


Q ss_pred             EeecCCCHH-HHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHH
Q psy3252         177 SLDISKDYE-NIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYG  255 (475)
Q Consensus       177 ~~Dvt~d~~-~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g  255 (475)
                      .+|++ |.. .++.+       +...|.++.+....                                     ...|+..
T Consensus        55 ~gD~~-d~~~~~~~a-------~~~~~~~~~~~~~~-------------------------------------~~~~~~~   89 (350)
T d1xgka_          55 QGPLL-NNVPLMDTL-------FEGAHLAFINTTSQ-------------------------------------AGDEIAI   89 (350)
T ss_dssp             ESCCT-TCHHHHHHH-------HTTCSEEEECCCST-------------------------------------TSCHHHH
T ss_pred             EeeCC-CcHHHHHHH-------hcCCceEEeecccc-------------------------------------cchhhhh
Confidence            99999 643 33333       34678777665321                                     1122333


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEecccccccc--CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCCCCC
Q psy3252         256 TIHMTKALVEGMKQRGRGCIVITASQAANLG--IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDTDTP  329 (475)
Q Consensus       256 ~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~--~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v~T~  329 (475)
                      ..+++.++    .+.+..++|+.||......  ......|..+|...+.+.+       ..++....+.||.+...
T Consensus        90 ~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_          90 GKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVR-------QLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             HHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHH-------TSSSCEEEEEECEEGGG
T ss_pred             hhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHH-------hhccCceeeeeceeecc
Confidence            33444443    2334456777887654433  2334567788876655433       34678888888876544

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.80  E-value=1.4e-08  Score=96.49  Aligned_cols=160  Identities=19%  Similarity=0.162  Sum_probs=99.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      ||||||+|.||.++++.|+++|+ .|+++++-....+ .. .+.+.                              ..+|
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~-~~~~~------------------------------~~~~   49 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDL------------------------------NIAD   49 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GH-HHHTS------------------------------CCSE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hh-ccccc------------------------------chhh
Confidence            79999999999999999999997 5777763221110 00 11110                              1223


Q ss_pred             cCCCHHHHHHHHHHHH--HhcCCccEEEEccccccCCCcccCCHHHHHHhhhhhhhccccchhhccccchhhhhhHHHHH
Q psy3252         180 ISKDYENIRSALQPAM--DRCGPVYMLVNCAGMALCGTLEEMTMQDIKVMEQPLWLRGYHTRLALWRSWTVIDLNLYGTI  257 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~--~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vN~~g~~  257 (475)
                      .. +.+.   ..+...  ..+..+++++|.|+.....   ..+.+.   .                     .+.|+.++.
T Consensus        50 ~~-~~~~---~~~~~~~~~~~~~~~~i~~~aa~~~~~---~~~~~~---~---------------------~~~~~~~~~   98 (307)
T d1eq2a_          50 YM-DKED---FLIQIMAGEEFGDVEAIFHEGACSSTT---EWDGKY---M---------------------MDNNYQYSK   98 (307)
T ss_dssp             EE-EHHH---HHHHHHTTCCCSSCCEEEECCSCCCTT---CCCHHH---H---------------------HHHTHHHHH
T ss_pred             hc-cchH---HHHHHhhhhcccchhhhhhhccccccc---cccccc---c---------------------ccccccccc
Confidence            33 3232   222222  2346788999998754321   122222   2                     667788888


Q ss_pred             HHHHHHHHHHHhCCCCeEEEecccccccc-----------CCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeCCCC
Q psy3252         258 HMTKALVEGMKQRGRGCIVITASQAANLG-----------IYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLPPDT  326 (475)
Q Consensus       258 ~l~~~~lp~m~~~~~g~IV~iSS~a~~~~-----------~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~PG~v  326 (475)
                      .+..++...    +. ++|+.||.....+           ......|+.+|.+.+.+++.+..+   .++.+..+.|..+
T Consensus        99 ~~l~~~~~~----~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~v  170 (307)
T d1eq2a_          99 ELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNV  170 (307)
T ss_dssp             HHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEE
T ss_pred             ccccccccc----cc-cccccccccccccccccccccccccccccccccccchhhhhccccccc---cccccccccceeE
Confidence            777765433    22 3555555444332           234568999999999888776544   6889999999999


Q ss_pred             CCCCC
Q psy3252         327 DTPGF  331 (475)
Q Consensus       327 ~T~~~  331 (475)
                      ..|..
T Consensus       171 yGp~~  175 (307)
T d1eq2a_         171 YGPRE  175 (307)
T ss_dssp             ESSSC
T ss_pred             eeccc
Confidence            98843

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=7.3e-05  Score=65.90  Aligned_cols=84  Identities=15%  Similarity=0.247  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH---HHHHHhCCCCcchhhhhHHHhhhcCCCCCc
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ---EEIKKACPNPKFIRFIEYEEIKKACPNPKF  169 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (475)
                      .+++||+|+|.|+ ||.|++++..|++.|. ++++++|+.+.++++.   +++....                       
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-----------------------   69 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-----------------------   69 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-----------------------
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-----------------------
Confidence            5688999999998 6999999999999998 7999999877666544   4444432                       


Q ss_pred             cceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         170 IRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       170 ~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                        .......|+. +.+++.....       ..|++||+..+.
T Consensus        70 --~~~~~~~~~~-~~~~~~~~~~-------~~diiIN~Tp~G  101 (182)
T d1vi2a1          70 --DCVVTVTDLA-DQQAFAEALA-------SADILTNGTKVG  101 (182)
T ss_dssp             --SCEEEEEETT-CHHHHHHHHH-------TCSEEEECSSTT
T ss_pred             --CcceEeeecc-cccchhhhhc-------ccceeccccCCc
Confidence              2335578888 7666554433       689999998654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.64  E-value=7.7e-05  Score=64.41  Aligned_cols=42  Identities=12%  Similarity=0.128  Sum_probs=38.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      +|.|+|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~   43 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA   43 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh
Confidence            689999886 999999999999999999999999998887654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.61  E-value=4.9e-05  Score=66.89  Aligned_cols=42  Identities=21%  Similarity=0.261  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +|.+|||+||+||+|.+.++.....|++|+.+++++++.+.+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~   70 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL   70 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH
Confidence            488999999999999999999999999999999998776543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=9.6e-05  Score=64.37  Aligned_cols=42  Identities=21%  Similarity=0.209  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +|.+|||+||+|++|...++.....|++|+++++++++.+.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~   69 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV   69 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc
Confidence            578999999999999999999999999999999987766544

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.53  E-value=0.00011  Score=63.91  Aligned_cols=51  Identities=14%  Similarity=0.163  Sum_probs=45.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      ++++||.|+|.|+ ||-+++++..|.+.|++|+++.|+.++.+++.+.+...
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~   64 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT   64 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc
Confidence            5778999999996 89999999999999999999999999998887766543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.53  E-value=0.00017  Score=62.33  Aligned_cols=82  Identities=23%  Similarity=0.293  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|.+|+|+| +|+||...+..+...|++|+++++++++++.+.+    .+.                        .. .+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga------------------------~~-~~   75 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGA------------------------DV-TL   75 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTC------------------------SE-EE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCC------------------------cE-EE
Confidence            467899997 6899999999999999999999999988765443    121                        11 12


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcC-CccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCG-PVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g-~IDvLVnnAG~  210 (475)
                      ..|-.  .++.....+.+.+..| .+|++|.++|.
T Consensus        76 ~~~~~--~~~~~~~~~~~~~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          76 VVDPA--KEEESSIIERIRSAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             ECCTT--TSCHHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred             ecccc--ccccchhhhhhhcccccCCceeeecCCC
Confidence            23332  2334555566665554 69999999984

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.44  E-value=0.0002  Score=61.71  Aligned_cols=48  Identities=23%  Similarity=0.356  Sum_probs=42.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      -++++++++|.|+ |++|..+++.|...|+ +|.++.|+.++.+++..++
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            3688999999998 9999999999999998 7999999998888777654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00015  Score=63.15  Aligned_cols=43  Identities=16%  Similarity=0.140  Sum_probs=38.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|++|+|+||+||+|...++.....|++|+++++++++.+.+.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~   70 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL   70 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH
Confidence            4789999999999999999999999999999999998876544

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.41  E-value=0.00032  Score=61.06  Aligned_cols=51  Identities=16%  Similarity=0.190  Sum_probs=44.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      ..++||+|+|.|+ ||-+++++..|.+.+.+|+++.|+.++++.+.+.+...
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~   64 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY   64 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc
Confidence            4678999999875 78899999999988889999999999999988877643

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.35  E-value=0.00027  Score=61.66  Aligned_cols=41  Identities=17%  Similarity=0.200  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      +|.+|||+||+|++|...++.+...|++|+++.++.++.+.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~   65 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM   65 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc
Confidence            37899999999999999999999999999999998876643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.31  E-value=0.00025  Score=62.61  Aligned_cols=50  Identities=20%  Similarity=0.217  Sum_probs=40.7

Q ss_pred             CCE-EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCC
Q psy3252          98 NGT-LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACP  147 (475)
Q Consensus        98 gk~-vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~  147 (475)
                      |.+ ++++||+||+|.+.++-.-..|++|+.+.|+.++.++..+.+++.+.
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc
Confidence            444 44579999999999888888899999999888888877777777653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.15  E-value=0.0051  Score=51.81  Aligned_cols=49  Identities=12%  Similarity=0.282  Sum_probs=41.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      -.++.+.|.|+ |.+|..+|..|+..|.  .|+++|++++.++..+.++...
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~   54 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG   54 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhC
Confidence            34668888996 9999999999999985  7999999999888777777654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.00034  Score=52.67  Aligned_cols=43  Identities=28%  Similarity=0.365  Sum_probs=37.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      ++.++||+||+||+|....+.+...|++|+.+.+++++.+-+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4778999999999999999988889999999999988776543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.10  E-value=0.00088  Score=58.41  Aligned_cols=41  Identities=24%  Similarity=0.352  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|+|+|+ |+||...+..+...|+ +|+++++++++++.+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a   69 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA   69 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc
Confidence            4889999986 8999999999999998 899999999887644

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.05  E-value=0.0011  Score=57.37  Aligned_cols=43  Identities=19%  Similarity=0.186  Sum_probs=37.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +|++|+|+||+|++|...++.+...|++|+.+++++++++.+.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~   69 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL   69 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc
Confidence            5889999999999999999988889999999999887766543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.04  E-value=0.00081  Score=55.55  Aligned_cols=71  Identities=15%  Similarity=0.220  Sum_probs=54.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      .|+|.|+ |.+|+.+|+.|.+.|+.|++++.+++..+++.+++                             .+.++..|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----------------------------~~~vi~Gd   51 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----------------------------DALVINGD   51 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------------------------SSEEEESC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----------------------------hhhhccCc
Confidence            5889997 99999999999999999999999998887665431                             24568899


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNC  207 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnn  207 (475)
                      .+ +.+.++++      .....|.++..
T Consensus        52 ~~-~~~~l~~~------~i~~a~~vv~~   72 (132)
T d1lssa_          52 CT-KIKTLEDA------GIEDADMYIAV   72 (132)
T ss_dssp             TT-SHHHHHHT------TTTTCSEEEEC
T ss_pred             cc-chhhhhhc------Chhhhhhhccc
Confidence            99 87755544      12356776654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.0021  Score=55.30  Aligned_cols=41  Identities=24%  Similarity=0.297  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++++.+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a   67 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA   67 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH
Confidence            3678999986 9999999999999999 799999999888754

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.99  E-value=0.0035  Score=52.80  Aligned_cols=46  Identities=15%  Similarity=0.288  Sum_probs=37.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+.+.|.|+ |.+|..+|..|+.+|.  .|+++|+++++++....++..
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~   52 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLED   52 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhc
Confidence            347778895 9999999999999983  899999999887766666654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.95  E-value=0.00039  Score=60.86  Aligned_cols=43  Identities=26%  Similarity=0.317  Sum_probs=37.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +|.+|||+||+||+|...++.....|++|+.+.+++++.+.+.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~   73 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR   73 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH
Confidence            4779999999999999999988899999999999988766543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.92  E-value=0.0079  Score=50.49  Aligned_cols=45  Identities=24%  Similarity=0.420  Sum_probs=35.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCh--hHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDE--KKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~--~~l~~~~~~l~~  144 (475)
                      .+.|+||+|.+|.++|..|+.+|.  +++++++++  ++++....++..
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~   50 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD   50 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchh
Confidence            478999999999999999999994  899999875  344555555554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.90  E-value=0.0003  Score=64.04  Aligned_cols=80  Identities=26%  Similarity=0.397  Sum_probs=55.4

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHH
Q psy3252          95 APTNGTLSVTGG----------------SSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYE  158 (475)
Q Consensus        95 ~l~gk~vLITGa----------------s~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~  158 (475)
                      +|+|++||||+|                ||..|.+||+++..+|++|+++.-....          ..+           
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~~p-----------   61 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------PTP-----------   61 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CCC-----------
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------Ccc-----------
Confidence            688999999987                6889999999999999999987654310          000           


Q ss_pred             HhhhcCCCCCccceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccC
Q psy3252         159 EIKKACPNPKFIRFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALC  213 (475)
Q Consensus       159 ~~~~~~~~~~~~~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~  213 (475)
                                  ..+..+  .+. ..++....+   .+.+...|++|.+|.++..
T Consensus        62 ------------~~~~~~--~~~-t~~~m~~~~---~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          62 ------------PFVKRV--DVM-TALEMEAAV---NASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             ------------TTEEEE--ECC-SHHHHHHHH---HHHGGGCSEEEECCBCCSE
T ss_pred             ------------cccccc--eeh-hhHHHHHHH---HhhhccceeEeeeechhhh
Confidence                        123332  344 445444444   4445578999999998754

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.00062  Score=59.85  Aligned_cols=78  Identities=19%  Similarity=0.242  Sum_probs=52.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEE-EEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHV-TIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~V-vl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +++|||+||+||+|...++..-..|+++ +.++++.++...+..++..                          .    .
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga--------------------------d----~   80 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF--------------------------D----A   80 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC--------------------------S----E
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc--------------------------e----E
Confidence            4799999999999999988888899964 4466666665554443321                          1    3


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      ..|.. + +++.+.++++..  ..+|+++.+.|
T Consensus        81 vi~~~-~-~~~~~~~~~~~~--~GvDvv~D~vG  109 (187)
T d1vj1a2          81 AVNYK-T-GNVAEQLREACP--GGVDVYFDNVG  109 (187)
T ss_dssp             EEETT-S-SCHHHHHHHHCT--TCEEEEEESSC
T ss_pred             Eeecc-c-hhHHHHHHHHhc--cCceEEEecCC
Confidence            34665 4 334444444432  36999999987

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.87  E-value=0.002  Score=55.29  Aligned_cols=43  Identities=23%  Similarity=0.247  Sum_probs=37.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+++|+|++|++|...+..+...|+ +|+++++++++++.+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~   70 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK   70 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH
Confidence            467999999999999999999999996 8999999988766543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.75  E-value=0.0065  Score=51.10  Aligned_cols=46  Identities=20%  Similarity=0.315  Sum_probs=38.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      |.+.|+|+ |.+|..+|..|+.+|.  .++++++++++++....++...
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a   49 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDA   49 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhcc
Confidence            56778895 9999999999999984  7999999999887776666654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.69  E-value=0.013  Score=49.79  Aligned_cols=49  Identities=20%  Similarity=0.338  Sum_probs=40.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      ++...|.|.|+ |.+|..+|..|+..|.  .++++|++++.++..+.+|...
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~   67 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHG   67 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCc
Confidence            44446778885 9999999999999986  7999999998888777777654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.65  E-value=0.0027  Score=54.62  Aligned_cols=45  Identities=24%  Similarity=0.264  Sum_probs=39.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l  142 (475)
                      ++|.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5788999986 8999999999999998 7999999999888776543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.60  E-value=0.013  Score=49.38  Aligned_cols=45  Identities=20%  Similarity=0.257  Sum_probs=33.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC---------EEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA---------HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga---------~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .|.|+||+|.+|..++..|+..+.         +++..+++.++++....++..
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   59 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED   59 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhc
Confidence            689999999999999999998753         233345566666666655544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.58  E-value=0.0016  Score=56.58  Aligned_cols=42  Identities=21%  Similarity=0.175  Sum_probs=35.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      +|.+|+|.|+ ||||...++.+...|+ +|+++++++++++.+.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~   69 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK   69 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH
Confidence            4778999976 8999999999999998 7999999988876543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.53  E-value=0.0022  Score=55.36  Aligned_cols=42  Identities=26%  Similarity=0.364  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      +|.+|+|.|+ +|+|...+..+...|+ +|+++++++++++.+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~   70 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK   70 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH
Confidence            4789999998 7899999999999996 8999999998876543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.48  E-value=0.0042  Score=53.53  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=34.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCE-EEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAH-VTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~-Vvl~~R~~~~l~~~~  139 (475)
                      .|.+|+|.|+ |+||...+..+...|++ |+++++++++++.+.
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~   70 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK   70 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH
Confidence            4778999987 89999999998889985 566788887776543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.46  E-value=0.004  Score=53.29  Aligned_cols=40  Identities=28%  Similarity=0.278  Sum_probs=34.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .|.+|+|.|+ ||||...++.+...|+++++++++.++.+.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~   69 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA   69 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH
Confidence            4789999986 899999998888899999999999887653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.43  E-value=0.015  Score=48.66  Aligned_cols=37  Identities=19%  Similarity=0.293  Sum_probs=31.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLL  136 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~  136 (475)
                      .+.|+||+|.+|.++|..|+.+|.  ++++++.++.+.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~   40 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV   40 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh
Confidence            578999999999999999999986  6999998865443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.39  E-value=0.0016  Score=53.63  Aligned_cols=39  Identities=23%  Similarity=0.268  Sum_probs=34.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      |.++|.|+ |-+|..+|+.|.+.|+.|++++.+++..+++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~   39 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY   39 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH
Confidence            45777776 7999999999999999999999999877654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.38  E-value=0.025  Score=48.04  Aligned_cols=48  Identities=21%  Similarity=0.289  Sum_probs=40.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      ++.+.+.|.|+ |.+|..+|..|+.+|.  .++++|++++..+..+.++..
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h   67 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH   67 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhc
Confidence            34567788896 9999999999999996  799999999888777777754

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.37  E-value=0.0019  Score=56.30  Aligned_cols=42  Identities=29%  Similarity=0.362  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .++++||+||+||+|...++..-..|++|+.++++.++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            345899999999999999998889999999999998886644

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.36  E-value=0.0014  Score=56.72  Aligned_cols=43  Identities=23%  Similarity=0.327  Sum_probs=37.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      ++.+|||+||+||+|...++.....|++|+.+.+++++.+.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~   65 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK   65 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH
Confidence            4668999999999999999888889999999999988776543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.36  E-value=0.0044  Score=53.67  Aligned_cols=42  Identities=24%  Similarity=0.319  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+|+|+|+ ||+|+..+..+...|+ +|+++++++++++-+.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak   71 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM   71 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH
Confidence            4789999986 8999999999999996 8999999999887544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.21  E-value=0.0053  Score=54.15  Aligned_cols=42  Identities=26%  Similarity=0.306  Sum_probs=34.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~   67 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK   67 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh
Confidence            4779999986 8999888888878888 8999999988876543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.13  E-value=0.055  Score=46.53  Aligned_cols=45  Identities=16%  Similarity=0.328  Sum_probs=31.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC---C----EEEEEecCh--hHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRG---A----HVTIVARDE--KKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~G---a----~Vvl~~R~~--~~l~~~~~~l~~  144 (475)
                      +|.||||+|.||.+++..|+..+   .    .+.+.+.+.  +.++.+.-++..
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d   79 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED   79 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcc
Confidence            69999999999999999999753   2    455556543  445555555544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.11  E-value=0.012  Score=49.79  Aligned_cols=41  Identities=27%  Similarity=0.352  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|+|.|+ |+||...+..+...|++|+++++++++++.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            4789999886 9999999998888999999999999887654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.03  E-value=0.039  Score=45.84  Aligned_cols=45  Identities=20%  Similarity=0.296  Sum_probs=34.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecC--hhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARD--EKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~--~~~l~~~~~~l~~  144 (475)
                      .+.|+||+|.+|.++|..++.+|.  .+++++.+  ++.++....++..
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~   50 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH   50 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhh
Confidence            578999999999999999999986  69999864  4445444445543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.01  E-value=0.0075  Score=52.11  Aligned_cols=41  Identities=22%  Similarity=0.290  Sum_probs=34.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|+|.| +||||...+..+...|+ +|+++++++++++.+
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a   69 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA   69 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH
Confidence            477999997 59999999999999999 688899998886543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.00  E-value=0.0083  Score=51.37  Aligned_cols=42  Identities=19%  Similarity=0.216  Sum_probs=34.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~   74 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE   74 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh
Confidence            4779999885 9999999998888887 6788899988766544

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.00  E-value=0.005  Score=52.73  Aligned_cols=41  Identities=24%  Similarity=0.326  Sum_probs=33.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~  138 (475)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+++++++++++.+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a   69 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA   69 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH
Confidence            4779999997 5999999999999997 677788888776543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.97  E-value=0.054  Score=44.74  Aligned_cols=44  Identities=14%  Similarity=0.284  Sum_probs=35.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+.|.|+ |.+|..+|..++.+|.  +++++|+++++++....++..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~   47 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH   47 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccc
Confidence            3556786 8999999999999885  799999999888766666554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.95  E-value=0.0092  Score=49.92  Aligned_cols=43  Identities=16%  Similarity=0.280  Sum_probs=37.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLL  136 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~  136 (475)
                      ++..-|++.|.||.|-+|..+|+.|.++|++|.+++|+.....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            3445578999999999999999999999999999999876543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.90  E-value=0.046  Score=45.42  Aligned_cols=45  Identities=20%  Similarity=0.418  Sum_probs=36.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      .+.|.|+ |.+|.++|..|+.+|.  .++++|+++++++....++...
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a   49 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHG   49 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhc
Confidence            4566786 9999999999999986  7999999998877666666553

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.86  E-value=0.019  Score=47.79  Aligned_cols=44  Identities=16%  Similarity=0.286  Sum_probs=32.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+.|.|+ |.+|..+|..|+.+|.  .++++|++++.++....++..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~   48 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH   48 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeecc
Confidence            3455686 9999999999999986  799999998877666656654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.76  E-value=0.091  Score=43.64  Aligned_cols=44  Identities=14%  Similarity=0.268  Sum_probs=32.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-C--CEEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR-G--AHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~-G--a~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+.|+|++|.+|.++|..|+.+ +  ..+++.+.++ ..+..+-++..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h   48 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSH   48 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHC
Confidence            4779999999999999988754 4  5899999864 44444445544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.75  E-value=0.0065  Score=51.91  Aligned_cols=42  Identities=21%  Similarity=0.341  Sum_probs=36.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~   68 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM   68 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh
Confidence            4789999986 89999998888889999999999988876543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.74  E-value=0.0096  Score=51.30  Aligned_cols=42  Identities=24%  Similarity=0.308  Sum_probs=36.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++.+.
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~   69 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI   69 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH
Confidence            4779999985 8999999999999997 7999999999887553

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=95.74  E-value=0.012  Score=49.82  Aligned_cols=46  Identities=13%  Similarity=0.104  Sum_probs=37.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+++.|.|+ |.+|..+|..|+..|. +++++|.+++.++..+..+..
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~   53 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   53 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhh
Confidence            456778897 9999999999999885 899999998887777666654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.01  Score=52.13  Aligned_cols=45  Identities=29%  Similarity=0.439  Sum_probs=40.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      |+|.|.|+ |-+|..+|..++..|+.|++++++++.++.+.+.+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            68889998 7799999999999999999999999988887776654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.60  E-value=0.0096  Score=51.38  Aligned_cols=52  Identities=23%  Similarity=0.288  Sum_probs=44.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhC
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC  146 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~  146 (475)
                      ..+++||.|+|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+....
T Consensus        13 ~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~   64 (177)
T d1nvta1          13 IGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL   64 (177)
T ss_dssp             HCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhh
Confidence            34689999999975 689999999998777 99999999999999988887653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.59  E-value=0.0051  Score=47.37  Aligned_cols=38  Identities=11%  Similarity=0.013  Sum_probs=33.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      +++||+++|.|. |.-|+++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999987 67799999999999999999998643

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.58  E-value=0.011  Score=50.59  Aligned_cols=41  Identities=24%  Similarity=0.218  Sum_probs=36.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +|++.|.|+ |.+|.++|..|+++|++|.+++|+++..+.+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            478899997 89999999999999999999999988776554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.57  E-value=0.017  Score=49.34  Aligned_cols=42  Identities=21%  Similarity=0.298  Sum_probs=34.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQ  139 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~  139 (475)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+++++++++++.+.
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~   70 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK   70 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH
Confidence            4779999985 7788888888888887 7888999998876543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.41  E-value=0.025  Score=46.95  Aligned_cols=44  Identities=14%  Similarity=0.109  Sum_probs=35.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      |.+.|.|+ |.+|.++|..|+.++. ++++++.+++..+....++.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~   46 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   46 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhh
Confidence            35667786 9999999999999986 89999999887766655554

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.39  E-value=0.018  Score=48.06  Aligned_cols=75  Identities=15%  Similarity=0.182  Sum_probs=56.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +++|.|. +-+|..+++.|.++|.+|++++.+++...+..++...                          ..+.++..|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--------------------------~~~~vi~Gd   57 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--------------------------DNADVIPGD   57 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--------------------------TTCEEEESC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--------------------------CCcEEEEcc
Confidence            5778887 6999999999999999999999998776655555443                          236678999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                      .+ +++.++++      .....|.+|...
T Consensus        58 ~~-d~~~L~~a------~i~~a~~vi~~~   79 (153)
T d1id1a_          58 SN-DSSVLKKA------GIDRCRAILALS   79 (153)
T ss_dssp             TT-SHHHHHHH------TTTTCSEEEECS
T ss_pred             Cc-chHHHHHh------ccccCCEEEEcc
Confidence            99 87655543      123567777654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.26  E-value=0.046  Score=45.80  Aligned_cols=44  Identities=11%  Similarity=0.111  Sum_probs=35.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+.|.|+ |++|.++|..|+..+. +++++|++++.++..+.++..
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~   49 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH   49 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhh
Confidence            5677785 9999999998888886 899999998887776666654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.12  E-value=0.047  Score=46.69  Aligned_cols=99  Identities=10%  Similarity=0.079  Sum_probs=60.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEee
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLD  179 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  179 (475)
                      +|-|.|- |-+|.++|+.|++.|++|++++|++++.+++.++-..........   ..+......      .....+...
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~---~~~~~~~~~------~~~~~ii~~   73 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAH---SLEEMVSKL------KKPRRIILL   73 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECS---SHHHHHHHB------CSSCEEEEC
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchh---hhhhhhhhh------cccceEEEe
Confidence            5667775 899999999999999999999999998887654311100000000   000000000      112234445


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         180 ISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       180 vt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      +. +.+.+....+.+.....+=+++|.+..
T Consensus        74 ~~-~~~~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          74 VK-AGQAVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             SC-TTHHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             cC-chHHHHHHHHHHHhccccCcEEEecCc
Confidence            66 667888888888776666667777654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.07  E-value=0.035  Score=46.77  Aligned_cols=90  Identities=18%  Similarity=0.158  Sum_probs=55.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      +.|.| .|-+|.++|+.|.+.|++|++++|+++.++++.+.    +.........  +.        .....+.++.  +
T Consensus         3 I~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~----~~~~~~~~~~--~~--------~~~~DiIila--v   65 (165)
T d2f1ka2           3 IGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER----QLVDEAGQDL--SL--------LQTAKIIFLC--T   65 (165)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TSCSEEESCG--GG--------GTTCSEEEEC--S
T ss_pred             EEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHh----hccceeeeec--cc--------cccccccccc--C
Confidence            55665 59999999999999999999999998877665432    1100000000  00        0012333332  2


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                        ..+.++++++++.....+=.++++.++
T Consensus        66 --p~~~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          66 --PIQLILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             --CHHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             --cHhhhhhhhhhhhhhcccccceeeccc
Confidence              456788888888766655556666654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.03  E-value=0.13  Score=42.81  Aligned_cols=44  Identities=14%  Similarity=0.130  Sum_probs=30.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCh--hHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA-------HVTIVARDE--KKLLQAQEEIK  143 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga-------~Vvl~~R~~--~~l~~~~~~l~  143 (475)
                      .|.|+||+|.+|.++|..|+..+.       .+++.+.+.  ++++.+.-++.
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~   57 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQ   57 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhc
Confidence            688999999999999999987542       356666543  34444444443

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.96  E-value=0.014  Score=50.83  Aligned_cols=45  Identities=22%  Similarity=0.311  Sum_probs=39.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      |+|.|.|+ |-||..+|..++..|++|++++++++.+++..+.+..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~   49 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAK   49 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhh
Confidence            46788888 7899999999999999999999999988877766654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.83  E-value=0.011  Score=47.13  Aligned_cols=41  Identities=17%  Similarity=0.173  Sum_probs=35.7

Q ss_pred             cCCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          92 RYLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        92 ~~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      -.++++||+++|.|++ .+|..-|+.|++.|++|++++....
T Consensus         6 i~l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           6 IFCQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EEECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             eEEEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence            3568999999999976 5999999999999999999887543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.71  E-value=0.29  Score=40.18  Aligned_cols=44  Identities=14%  Similarity=0.215  Sum_probs=35.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+.|.|+ |.+|.++|..|+.+|.  .++++|.+++.++..+.++..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~   47 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH   47 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhh
Confidence            3567785 9999999999999985  699999999887766666654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=94.66  E-value=0.16  Score=41.64  Aligned_cols=43  Identities=14%  Similarity=0.216  Sum_probs=34.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .+.|+|+ |.+|.++|..|+..|.  +++++|.+++.++.....+.
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~   46 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMY   46 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhh
Confidence            3667796 9999999999999984  89999999887766554443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.57  E-value=0.033  Score=49.15  Aligned_cols=44  Identities=25%  Similarity=0.311  Sum_probs=38.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      .+++||+|+|-| .|.+|..+|+.|.+.|++|++++.+.+.+...
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            368999999997 77899999999999999999999998776543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.093  Score=48.79  Aligned_cols=25  Identities=24%  Similarity=0.127  Sum_probs=22.1

Q ss_pred             CChHHHHHHHHHHHcCCEEEEEecC
Q psy3252         107 SSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus       107 s~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      ||..|.++|+.|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            5778999999999999999998653

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.56  E-value=0.055  Score=46.14  Aligned_cols=36  Identities=22%  Similarity=0.341  Sum_probs=32.6

Q ss_pred             CCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHH
Q psy3252         106 GSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEE  141 (475)
Q Consensus       106 as~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~  141 (475)
                      |.|-+|.++|++|++.|++|.+++|++++.+++.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            578999999999999999999999999988877654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.53  E-value=0.013  Score=48.91  Aligned_cols=38  Identities=18%  Similarity=0.301  Sum_probs=33.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      .+.++||++||.|| |.+|..-|+.|++.|++|++++..
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998 569999999999999999998653

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.52  E-value=0.031  Score=46.98  Aligned_cols=41  Identities=24%  Similarity=0.262  Sum_probs=35.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +|.+++|.|+ |+||...+..+...|++|+++++++++++.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            4778999875 9999999999999999999999999887654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.23  E-value=0.073  Score=47.90  Aligned_cols=53  Identities=21%  Similarity=0.378  Sum_probs=42.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPN  148 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~  148 (475)
                      .+++++|+|.| .||+|..++..|+..|. +++++|.+                   ..+.+.+++.+.+..+.
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~   99 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH   99 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcc
Confidence            36678999999 77999999999999998 89998864                   23566777777776654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.64  E-value=0.044  Score=46.12  Aligned_cols=39  Identities=15%  Similarity=0.264  Sum_probs=33.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      |-|.| .|-+|..+|+.|+++|++|++++|++++.+++.+
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            44554 5899999999999999999999999988777654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=93.44  E-value=0.62  Score=39.28  Aligned_cols=75  Identities=23%  Similarity=0.286  Sum_probs=54.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      .+|+|.|+ |--|+.-++.....|+.|.++|.+.++++++.......                           ++   .
T Consensus        33 a~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~---------------------------~~---~   81 (168)
T d1pjca1          33 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR---------------------------VE---L   81 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG---------------------------SE---E
T ss_pred             cEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc---------------------------ce---e
Confidence            37888886 46788889999999999999999999988776544321                           11   2


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEcccccc
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAGMAL  212 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~  212 (475)
                      -.. +.+.+.+.+.       .-|++|.++=+..
T Consensus        82 ~~~-~~~~l~~~~~-------~aDivI~aalipG  107 (168)
T d1pjca1          82 LYS-NSAEIETAVA-------EADLLIGAVLVPG  107 (168)
T ss_dssp             EEC-CHHHHHHHHH-------TCSEEEECCCCTT
T ss_pred             ehh-hhhhHHHhhc-------cCcEEEEeeecCC
Confidence            233 5555555444       5799999987654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.04  E-value=0.047  Score=44.09  Aligned_cols=70  Identities=17%  Similarity=0.142  Sum_probs=49.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      |+++|.|. +.+|..+++.|  +|.+|++++.+++..+....                              ..+.++.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~------------------------------~~~~~i~G   47 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR------------------------------SGANFVHG   47 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH------------------------------TTCEEEES
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh------------------------------cCcccccc
Confidence            57888885 78999999999  46678888998887654432                              23567889


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                      |.+ +++.++++      .....+.+|.+.
T Consensus        48 d~~-~~~~L~~a------~i~~A~~vi~~~   70 (129)
T d2fy8a1          48 DPT-RVSDLEKA------NVRGARAVIVNL   70 (129)
T ss_dssp             CTT-SHHHHHHT------TCTTCSEEEECC
T ss_pred             ccC-CHHHHHHh------hhhcCcEEEEec
Confidence            999 87665543      234566776543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.58  E-value=0.04  Score=54.22  Aligned_cols=52  Identities=23%  Similarity=0.320  Sum_probs=40.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCC
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPN  148 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~  148 (475)
                      +++..|||.|+ ||||.++++.|+..|. ++.++|.+                   ..+.+.+++.+.+..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~  106 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN  106 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTT
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCC
Confidence            45668999997 6899999999999998 89998864                   23566677777776654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.13  Score=43.48  Aligned_cols=40  Identities=25%  Similarity=0.219  Sum_probs=35.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK  134 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~  134 (475)
                      ..+.||+++|.|- |-||+.+|+.|...|++|++++.++.+
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            5678999999984 589999999999999999999998744

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.53  E-value=0.089  Score=44.70  Aligned_cols=44  Identities=23%  Similarity=0.281  Sum_probs=39.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|-|.=+|+-++..|.++|++|+++......+.+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~   76 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH   76 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHH
Confidence            57899999999999999999999999999999999877655543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.43  E-value=3.7  Score=37.78  Aligned_cols=82  Identities=12%  Similarity=0.010  Sum_probs=55.7

Q ss_pred             CCCCEEEEecC-CChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceE
Q psy3252          96 PTNGTLSVTGG-SSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFI  173 (475)
Q Consensus        96 l~gk~vLITGa-s~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  173 (475)
                      .+|++||=..+ +||++.+    ++..|+ .|+.++.+...++.+.+.+...+-..                     .++
T Consensus       143 ~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~---------------------~~~  197 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDM---------------------ANH  197 (317)
T ss_dssp             TBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCC---------------------TTE
T ss_pred             hCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccC---------------------cce
Confidence            35888885554 5665543    445787 79999999999888887776544211                     357


Q ss_pred             EEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         174 EYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       174 ~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .++..|+.       +.++...++..+.|++|.+.-
T Consensus       198 ~~i~~d~~-------~~l~~~~~~~~~fD~Ii~DPP  226 (317)
T d2b78a2         198 QLVVMDVF-------DYFKYARRHHLTYDIIIIDPP  226 (317)
T ss_dssp             EEEESCHH-------HHHHHHHHTTCCEEEEEECCC
T ss_pred             EEEEccHH-------HHHHHHHhhcCCCCEEEEcCh
Confidence            78888775       233444455568999998854

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.42  E-value=0.27  Score=40.98  Aligned_cols=95  Identities=9%  Similarity=-0.029  Sum_probs=56.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGA--HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga--~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      |+++|.| .|-||.++|+.|.+.|+  +|+.++++++.++.+.+.    +.........  +        ........++
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~----~~~~~~~~~~--~--------~~~~~~~dlI   66 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIIDEGTTSI--A--------KVEDFSPDFV   66 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCSEEESCG--G--------GGGGTCCSEE
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHh----hcchhhhhhh--h--------hhhccccccc
Confidence            4688887 58999999999999996  788899998877765442    1100000000  0        0000011222


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      -+-+  ..+.+..+++++......=.+++..+++
T Consensus        67 ila~--p~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          67 MLSS--PVRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             EECS--CHHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             cccC--Cchhhhhhhhhhhccccccccccccccc
Confidence            2222  4567888888887766555566655553

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.26  E-value=0.46  Score=44.31  Aligned_cols=82  Identities=13%  Similarity=-0.013  Sum_probs=56.6

Q ss_pred             CCCCEEEEecCC-ChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGS-SGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas-~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+|++||=.++. ||++.+    ++..|.+|+.++.++..++.+.+.+...+-                       .++.
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-----------------------~~~~  196 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGL-----------------------GNVR  196 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTC-----------------------TTEE
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCC-----------------------CCcc
Confidence            478899866665 555543    344567999999999999988887766542                       3477


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      ++..|+. +      +.+.......+.|++|.+.-..
T Consensus       197 ~i~~d~~-~------~~~~~~~~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         197 VLEANAF-D------LLRRLEKEGERFDLVVLDPPAF  226 (318)
T ss_dssp             EEESCHH-H------HHHHHHHTTCCEEEEEECCCCS
T ss_pred             eeeccHH-H------HhhhhHhhhcCCCEEEEcCCcc
Confidence            7888876 3      2233334446899999987543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.18  E-value=0.082  Score=45.16  Aligned_cols=44  Identities=18%  Similarity=0.076  Sum_probs=39.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQ  137 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~  137 (475)
                      .++.||+++|.|-|.=+|+-++..|+++|++|.++......+.+
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~   78 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE   78 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence            57899999999999999999999999999999999887665543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=91.95  E-value=0.069  Score=44.41  Aligned_cols=33  Identities=21%  Similarity=0.251  Sum_probs=30.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      +|+|.|+ |.||..++..|++.|++|.+++|+.+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            5778888 99999999999999999999999865

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.92  E-value=0.24  Score=41.40  Aligned_cols=39  Identities=13%  Similarity=0.148  Sum_probs=32.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +|-|. |.|-+|.++|++|+++|++|.+++|+.++.+.+.
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            45566 4689999999999999999999999988776554

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.66  E-value=0.63  Score=36.38  Aligned_cols=84  Identities=19%  Similarity=0.233  Sum_probs=59.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .+.++.|.| +|=+|+.++.+..+.|++|++++.+++.-..                                ...-.++
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~--------------------------------~va~~~i   56 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM--------------------------------HVAHRSH   56 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG--------------------------------GGSSEEE
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh--------------------------------hcCCeEE
Confidence            345799998 6689999999999999999999987542100                                0112467


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccccCCCcccCCHHHHHHh
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMALCGTLEEMTMQDIKVM  227 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~~~~~~~~~~~~~~~~~  227 (475)
                      ..|.. |.+.+.++....     .+|++..        .++..+.+-++.+
T Consensus        57 ~~~~~-d~~~l~~~~~~~-----~~DviT~--------E~EnI~~~~L~~l   93 (111)
T d1kjqa2          57 VINML-DGDALRRVVELE-----KPHYIVP--------EIEAIATDMLIQL   93 (111)
T ss_dssp             ECCTT-CHHHHHHHHHHH-----CCSEEEE--------CSSCSCHHHHHHH
T ss_pred             ECCCC-CHHHHHHHHHhh-----CCceEEE--------EecCcCHHHHHHH
Confidence            78998 988888877653     6788742        3456666666655

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.47  E-value=0.2  Score=43.42  Aligned_cols=82  Identities=15%  Similarity=0.177  Sum_probs=59.9

Q ss_pred             CCEEE-EecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          98 NGTLS-VTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        98 gk~vL-ITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      |.+++ +|-|+||...++.+.+ . +.+|+.+|++++.++.+.+.+....                        .++.++
T Consensus        24 ~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~------------------------~r~~~~   77 (192)
T d1m6ya2          24 EKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFS------------------------DRVSLF   77 (192)
T ss_dssp             TCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGT------------------------TTEEEE
T ss_pred             CCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccc------------------------ccccch
Confidence            44544 7888999999998876 3 4699999999999888877665432                        568889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      ..+.. +..   ..+...  ..+.+|.++...|++
T Consensus        78 ~~~f~-~~~---~~~~~~--~~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          78 KVSYR-EAD---FLLKTL--GIEKVDGILMDLGVS  106 (192)
T ss_dssp             ECCGG-GHH---HHHHHT--TCSCEEEEEEECSCC
T ss_pred             hHHHh-hHH---HHHHHc--CCCCcceeeeccchh
Confidence            98887 533   222221  135899999999975

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.44  E-value=0.2  Score=44.81  Aligned_cols=48  Identities=17%  Similarity=0.192  Sum_probs=41.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHH
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEE  141 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~  141 (475)
                      ..+++||+|+|-| .|.+|..+|+.|.+.|++|++++.+...++.+..+
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            3568999999887 67999999999999999999999998887766543

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.10  E-value=0.34  Score=42.08  Aligned_cols=76  Identities=16%  Similarity=0.128  Sum_probs=55.3

Q ss_pred             CCCCCCCEEEEecCCCh-HHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCcc
Q psy3252          93 YLAPTNGTLSVTGGSSG-IGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFI  170 (475)
Q Consensus        93 ~~~l~gk~vLITGas~G-IG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (475)
                      .-+++|++||=-|+++| +|.    .++..|+ +|+.++.++..++.+.+.+...+                        
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~------------------------   93 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFK------------------------   93 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGT------------------------
T ss_pred             cCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcC------------------------
Confidence            45688999998888766 443    3456786 89999999988887766554432                        


Q ss_pred             ceEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         171 RFIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       171 ~~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .+..++..|+. +.             .+++|++|.|.-.
T Consensus        94 ~~~~~~~~d~~-~~-------------~~~fD~Vi~nPP~  119 (201)
T d1wy7a1          94 GKFKVFIGDVS-EF-------------NSRVDIVIMNPPF  119 (201)
T ss_dssp             TSEEEEESCGG-GC-------------CCCCSEEEECCCC
T ss_pred             CCceEEECchh-hh-------------CCcCcEEEEcCcc
Confidence            45677788876 32             3589999998854

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.06  E-value=0.16  Score=44.27  Aligned_cols=73  Identities=18%  Similarity=0.166  Sum_probs=52.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccc
Q psy3252          93 YLAPTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIR  171 (475)
Q Consensus        93 ~~~l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
                      .-++.||+||=.|+++|+   ++..++..|+ +|+.++.+++.++.+.+.+                            .
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----------------------------~   92 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----------------------------G   92 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----------------------------T
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----------------------------c
Confidence            357889999999998873   3345677886 6999999987766544321                            3


Q ss_pred             eEEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         172 FIEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       172 ~v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      ++.++.+|+. +.             .+++|++|.|.-.
T Consensus        93 ~~~~~~~D~~-~l-------------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_          93 GVNFMVADVS-EI-------------SGKYDTWIMNPPF  117 (197)
T ss_dssp             TSEEEECCGG-GC-------------CCCEEEEEECCCC
T ss_pred             cccEEEEehh-hc-------------CCcceEEEeCccc
Confidence            3567888887 42             2589999998643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=90.98  E-value=0.19  Score=41.54  Aligned_cols=40  Identities=25%  Similarity=0.331  Sum_probs=33.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcC-CEEEEEecChhHHHHHHHH
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRG-AHVTIVARDEKKLLQAQEE  141 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~G-a~Vvl~~R~~~~l~~~~~~  141 (475)
                      +.+.|+ |-+|.++++.|++.| ++|++++|++++++++.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            556665 899999999999988 7999999999888776553

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=90.74  E-value=0.094  Score=45.46  Aligned_cols=39  Identities=18%  Similarity=0.257  Sum_probs=32.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +.+.|.||+ -.|.++|..|++.|++|.+++|+++..+.+
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i   46 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLV   46 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence            357788854 689999999999999999999998766543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.74  E-value=0.15  Score=43.57  Aligned_cols=38  Identities=24%  Similarity=0.122  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      .+++||+++|.|-|.=+|+-+|..|+++|++|.++..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            47899999999999999999999999999999988765

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.65  E-value=1.2  Score=41.35  Aligned_cols=82  Identities=12%  Similarity=0.087  Sum_probs=56.7

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          97 TNGTLSVTGGS-SGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        97 ~gk~vLITGas-~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .|++||=.|+. |+++.++    +..|+ +|+.++.++..++.+.+.+...+-.                      .+++
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~----------------------~~~~  198 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVE----------------------DRMK  198 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCG----------------------GGEE
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCC----------------------ccce
Confidence            48888877665 5555544    45677 7999999999998888877665421                      4677


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      ++..|+. +      ..........+.|++|.+.-..
T Consensus       199 ~~~~d~~-~------~~~~~~~~~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         199 FIVGSAF-E------EMEKLQKKGEKFDIVVLDPPAF  228 (324)
T ss_dssp             EEESCHH-H------HHHHHHHTTCCEEEEEECCCCS
T ss_pred             eeechhh-h------hhHHHHhccCCCCchhcCCccc
Confidence            7777765 2      2333444456899999987543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.55  E-value=0.63  Score=40.58  Aligned_cols=80  Identities=15%  Similarity=0.111  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|.+||-.|+++|--.++..++...+.+|+.++.+++.++.+.+.+...+-                       .++.++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~-----------------------~n~~~~  131 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-----------------------ENVIFV  131 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-----------------------CSEEEE
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcc-----------------------cccccc
Confidence            467899999888766665555555566999999999999888888776543                       456667


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      ..|.. +.          ....+..|+++.+++.
T Consensus       132 ~~d~~-~~----------~~~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         132 CGDGY-YG----------VPEFSPYDVIFVTVGV  154 (213)
T ss_dssp             ESCGG-GC----------CGGGCCEEEEEECSBB
T ss_pred             cCchH-Hc----------cccccchhhhhhhccH
Confidence            77765 21          1123579999988864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.54  E-value=0.21  Score=41.37  Aligned_cols=41  Identities=7%  Similarity=0.170  Sum_probs=34.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHH
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEI  142 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l  142 (475)
                      +.|. |+|-+|.++++.|.+.|++|++++|+.++.+++.+++
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            3444 5789999999999999999999999998887766544

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.28  E-value=0.58  Score=41.10  Aligned_cols=79  Identities=16%  Similarity=0.142  Sum_probs=60.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|.+||..|+++|--.++.-+|+  |.+|+.+.++++-.+.+.+.+.+.+-                       .++.++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~-----------------------~nv~~~  132 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGV-----------------------KNVHVI  132 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTC-----------------------CSEEEE
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCC-----------------------ceeEEE
Confidence            46789999999888888777676  56799999998878877777776543                       568889


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      ..|.. +.          ....++.|.++.++++.
T Consensus       133 ~gd~~-~g----------~~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         133 LGDGS-KG----------FPPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             ESCGG-GC----------CGGGCCEEEEEECSBBS
T ss_pred             ECccc-cC----------CcccCcceeEEeecccc
Confidence            99987 31          12346899999888764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.10  E-value=0.37  Score=39.60  Aligned_cols=37  Identities=19%  Similarity=0.152  Sum_probs=29.8

Q ss_pred             CCCEEEEe-cCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          97 TNGTLSVT-GGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        97 ~gk~vLIT-Gas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      .++.++|. .+++.||.++|..|+++|++|.++.+...
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            35555554 56789999999999999999999988753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=89.10  E-value=1.1  Score=38.11  Aligned_cols=40  Identities=20%  Similarity=0.109  Sum_probs=33.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      .|+|.|| |-.|+.-++.....|++|.++|.+.+.++++.+
T Consensus        31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            6888875 467889999999999999999999988776553

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=88.86  E-value=3  Score=38.38  Aligned_cols=81  Identities=19%  Similarity=0.028  Sum_probs=55.4

Q ss_pred             CCCEEEEec-CCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEE
Q psy3252          97 TNGTLSVTG-GSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEY  175 (475)
Q Consensus        97 ~gk~vLITG-as~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  175 (475)
                      ++++||=.. ++|+++.+    ++..|++|+.++.+...++.+.+.+...+-..                     .++.+
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~---------------------~~~~~  186 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQ---------------------APIRW  186 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTT---------------------SCEEE
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccC---------------------CcEEE
Confidence            577888444 45655554    34679999999999999988887766544211                     35778


Q ss_pred             EEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         176 VSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       176 ~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      +..|+.       ++++....+..+.|++|.+.=
T Consensus       187 i~~D~~-------~~l~~~~~~~~~fD~IilDPP  213 (309)
T d2igta1         187 ICEDAM-------KFIQREERRGSTYDIILTDPP  213 (309)
T ss_dssp             ECSCHH-------HHHHHHHHHTCCBSEEEECCC
T ss_pred             EeCCHH-------HhHHHHhhcCCCCCEEEECCC
Confidence            877765       334444455568999998854

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.86  E-value=0.62  Score=42.94  Aligned_cols=75  Identities=23%  Similarity=0.192  Sum_probs=52.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ++||+||-.|++.|+   ++..+++.|+ +|+.++.++.. ..+.+...+.+..                      .++.
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~----------------------~~i~   87 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLE----------------------DTIT   87 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCT----------------------TTEE
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCC----------------------ccce
Confidence            579999999999886   5667888897 79999988754 3344444443321                      5688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNC  207 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnn  207 (475)
                      ++..|+. +..          ....++|++|..
T Consensus        88 ~~~~~~~-~l~----------~~~~~~D~Ivse  109 (311)
T d2fyta1          88 LIKGKIE-EVH----------LPVEKVDVIISE  109 (311)
T ss_dssp             EEESCTT-TSC----------CSCSCEEEEEEC
T ss_pred             EEEeeHH-Hhc----------CccccceEEEEe
Confidence            8888887 532          112479999875

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=88.47  E-value=0.63  Score=41.93  Aligned_cols=49  Identities=29%  Similarity=0.270  Sum_probs=39.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhC
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKAC  146 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~  146 (475)
                      ..+|++||=.|+++|+   ++..+++.|++|+.++.++..++.+.+.....+
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~  166 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNG  166 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTT
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcC
Confidence            4578999999999986   334567889999999999999988887766544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.08  E-value=0.38  Score=38.16  Aligned_cols=37  Identities=32%  Similarity=0.371  Sum_probs=31.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      +.++|+++|.| +|.+|.++|..|++.|.+|.++.+..
T Consensus        27 ~~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            34567888886 56999999999999999999998864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.00  E-value=0.25  Score=39.88  Aligned_cols=72  Identities=13%  Similarity=0.204  Sum_probs=52.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEE-EecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEe
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTI-VARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSL  178 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  178 (475)
                      .+.|.|++|-+|+++++.+.+.|+.++. .+++...          ....                      ..   +..
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~----------------------~D---VvI   46 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDS----------------------PD---VVI   46 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSC----------------------CS---EEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------Hhcc----------------------CC---EEE
Confidence            4889999999999999999999998765 4544211          0000                      11   567


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         179 DISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       179 Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      |+| .++.+.+.++.+.+.  ++-+++-.-|
T Consensus        47 DFS-~p~~~~~~l~~~~~~--~~p~ViGTTG   74 (128)
T d1vm6a3          47 DFS-SPEALPKTVDLCKKY--RAGLVLGTTA   74 (128)
T ss_dssp             ECS-CGGGHHHHHHHHHHH--TCEEEECCCS
T ss_pred             Eec-CHHHHHHHHHHHHhc--CCCEEEEcCC
Confidence            999 999999999988776  4667766665

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=87.97  E-value=0.42  Score=41.49  Aligned_cols=38  Identities=18%  Similarity=0.147  Sum_probs=33.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      .+.||++.|.| -|.||+.+|+.|..-|++|+..++...
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            46799999998 679999999999999999999987644

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.96  E-value=1.1  Score=34.72  Aligned_cols=33  Identities=33%  Similarity=0.421  Sum_probs=28.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      |.++|.|| |-||.++|..|++.|.+|.++.|..
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            67888875 6999999999999999999998764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.93  E-value=1.3  Score=37.40  Aligned_cols=77  Identities=16%  Similarity=0.194  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|.+||=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.+++.+-.                      .+++++
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~----------------------~~v~~~   87 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLG----------------------DNVTLM   87 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC----------------------TTEEEE
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCC----------------------cceEEE
Confidence            5778888888776   334456677889999999999999988888775421                      467888


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      .+|.. +          ........|.++.+.+
T Consensus        88 ~gda~-~----------~~~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          88 EGDAP-E----------ALCKIPDIDIAVVGGS  109 (186)
T ss_dssp             ESCHH-H----------HHTTSCCEEEEEESCC
T ss_pred             ECchh-h----------cccccCCcCEEEEeCc
Confidence            87754 2          1123457899987643

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=87.66  E-value=0.41  Score=40.07  Aligned_cols=45  Identities=13%  Similarity=-0.036  Sum_probs=38.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHH
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .+|++||..|++.|   ..+..|+++|++|+.++.++..++.+.+...
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~   63 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERG   63 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence            35789999999988   4777999999999999999998888776654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.56  E-value=1.2  Score=36.29  Aligned_cols=78  Identities=15%  Similarity=0.164  Sum_probs=53.3

Q ss_pred             CCCCCEEEEecCC-ChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLSVTGGS-SGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vLITGas-~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .++|++||=.|++ |++|.    +.+.+|+ +|+.++.+.+..+.+.+.+...+..                      .+
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~----------------------~~   65 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE----------------------NR   65 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG----------------------GG
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccc----------------------cc
Confidence            3578999866655 55665    3466887 8999999998888777776654321                      56


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                      +.++..|+. .      +++   ...+..|+++.+.
T Consensus        66 ~~ii~~D~~-~------~l~---~~~~~fDiIf~DP   91 (152)
T d2esra1          66 FTLLKMEAE-R------AID---CLTGRFDLVFLDP   91 (152)
T ss_dssp             EEEECSCHH-H------HHH---HBCSCEEEEEECC
T ss_pred             hhhhccccc-c------ccc---ccccccceeEech
Confidence            888888765 2      122   2345789998764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.50  E-value=0.39  Score=40.76  Aligned_cols=43  Identities=16%  Similarity=0.333  Sum_probs=32.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHh
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKA  145 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~  145 (475)
                      .|.|.|+ |..|.++|..|++.|.+|.+++|..+.  +..+.+.+.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~   44 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAG   44 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhh
Confidence            4567775 789999999999999999999996542  334555443

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=87.44  E-value=5.2  Score=33.79  Aligned_cols=68  Identities=15%  Similarity=0.024  Sum_probs=40.4

Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEeccccccccCCCChhhHHHHHHHHHHHHHHHHHHccCCcEEEEEeC
Q psy3252         252 NLYGTIHMTKALVEGMKQRGRGCIVITASQAANLGIYGLAAYTSSKFALKGFAEALYMEVKQSGLTITLCLP  323 (475)
Q Consensus       252 N~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~~~~Y~aSKaAl~~l~~sLa~El~~~gIrVn~V~P  323 (475)
                      .+...+.++|++..   .....++.+++..+.... .+...-+...+++.+|+|+++.|+....+++..+.+
T Consensus       101 ~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~~~-~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~~  168 (209)
T d2fr1a2         101 SLADTLSLVQAMVS---AELGCPLWTVTESAVATG-PFERVRNAAHGALWGVGRVIALENPAVWGGLVDVPA  168 (209)
T ss_dssp             HHHHHHHHHHHHHH---TTCCCCEEEEEESCSCSS-TTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEEEECT
T ss_pred             HHHHHHHHHHHHHh---CCCCCcEEEEEcCCcccC-CCcccCCHhHHhHHHHHHHHHHhCCCceEEEEECCC
Confidence            34555666676542   223356666655332221 222333557889999999999998775555555543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=87.38  E-value=0.4  Score=37.99  Aligned_cols=36  Identities=28%  Similarity=0.467  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      .+|+++|.| +|-+|.++|..|++.|.+|.++.+...
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            357888877 569999999999999999999998753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.14  E-value=0.36  Score=41.73  Aligned_cols=38  Identities=24%  Similarity=0.177  Sum_probs=32.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHH
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQ  139 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~  139 (475)
                      +.|. |.|-+|+.+|..|++.|++|+.+|.|++..+.+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            4455 6889999999999999999999999987766543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=86.75  E-value=0.64  Score=39.77  Aligned_cols=38  Identities=21%  Similarity=0.298  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      +.+.++++.|.| -|.||+.+|+.+..-|++|+..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            467899999985 78999999999999999999999854

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=86.32  E-value=0.89  Score=35.58  Aligned_cols=32  Identities=22%  Similarity=0.251  Sum_probs=28.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      |.++|.| +|-||.++|..|++.|.+|.++.|.
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~   54 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARG   54 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeeehh
Confidence            5777777 4689999999999999999999985

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=86.13  E-value=0.63  Score=39.20  Aligned_cols=44  Identities=9%  Similarity=0.189  Sum_probs=25.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-----CCEEEEEecChhHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGKHVAIEAAKR-----GAHVTIVARDEKKLLQAQEEIK  143 (475)
Q Consensus       100 ~vLITGas~GIG~aiA~~La~~-----Ga~Vvl~~R~~~~l~~~~~~l~  143 (475)
                      .+.|.||++.-...+...++..     +.+|+++|.++++++.....+.
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~   53 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACD   53 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHH
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHH
Confidence            4566677543222233333322     2479999999999886555544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.12  E-value=0.92  Score=35.72  Aligned_cols=47  Identities=26%  Similarity=0.314  Sum_probs=35.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh--------hHHHHHHHHHHHhC
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE--------KKLLQAQEEIKKAC  146 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~--------~~l~~~~~~l~~~~  146 (475)
                      |.++|.|| |-||.++|..|++.|++|.++.++.        +-.+.+.+.+++.+
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~l~~~d~ei~~~l~~~l~~~G   78 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQG   78 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTT
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccccchhhhhhhHHHHHHHHHhcc
Confidence            57788874 5899999999999999999998754        33344445555543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.43  E-value=0.92  Score=35.83  Aligned_cols=33  Identities=18%  Similarity=0.288  Sum_probs=29.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      |.++|.||+ -||.++|..|++.|.+|.++.|+.
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            678888865 799999999999999999999863

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.42  E-value=1.2  Score=34.62  Aligned_cols=33  Identities=18%  Similarity=0.193  Sum_probs=28.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      |.++|.| +|-+|.++|..|.+.|.+|.++.|..
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            5677776 56999999999999999999998853

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.37  E-value=1  Score=39.37  Aligned_cols=74  Identities=18%  Similarity=0.105  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      ++++||=.|++.|   .++..|+++|++|+.++.+++-++.+.+.+...+                        .++.++
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~------------------------~~i~~~   93 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERN------------------------LKIEFL   93 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCCEEE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccc------------------------ccchhe
Confidence            4568999999887   5567799999999999999988888777766543                        357788


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      ..|+. +..           --+..|++++.-+
T Consensus        94 ~~d~~-~l~-----------~~~~fD~I~~~~~  114 (251)
T d1wzna1          94 QGDVL-EIA-----------FKNEFDAVTMFFS  114 (251)
T ss_dssp             ESCGG-GCC-----------CCSCEEEEEECSS
T ss_pred             ehhhh-hcc-----------cccccchHhhhhh
Confidence            88887 522           0136898776533

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=85.28  E-value=1.9  Score=38.97  Aligned_cols=78  Identities=17%  Similarity=0.109  Sum_probs=53.0

Q ss_pred             CEEEEecCCCh-HHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          99 GTLSVTGGSSG-IGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        99 k~vLITGas~G-IG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ++++-.|+++| |+.++++   ...++|+.++.+++.++-+.......+-.                      .++.+..
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~----------------------~~~~i~~  166 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVS----------------------DRFFVRK  166 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCT----------------------TSEEEEE
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCC----------------------ceeEEee
Confidence            35665555555 5555542   35679999999999988887776654321                      4677778


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      .|+. +.         ..+.++++|++|.|.-+.
T Consensus       167 ~~~~-~~---------~~~~~~~fDlIVsNPPYI  190 (271)
T d1nv8a_         167 GEFL-EP---------FKEKFASIEMILSNPPYV  190 (271)
T ss_dssp             SSTT-GG---------GGGGTTTCCEEEECCCCB
T ss_pred             cccc-cc---------cccccCcccEEEEccccc
Confidence            8876 32         223457899999998765

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.00  E-value=2.9  Score=35.17  Aligned_cols=81  Identities=17%  Similarity=0.157  Sum_probs=56.9

Q ss_pred             CCCCCEEE-EecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccce
Q psy3252          95 APTNGTLS-VTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRF  172 (475)
Q Consensus        95 ~l~gk~vL-ITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (475)
                      .+.|+++| +-.|||++|.+    .+.+|+ +|+.++.+....+.+.+.+...+..                      .+
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~----------------------~~   92 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEP----------------------EK   92 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG----------------------GG
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcc----------------------cc
Confidence            35788888 55556778875    456888 6999999999888888777655421                      46


Q ss_pred             EEEEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         173 IEYVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       173 v~~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                      +.++..|+.       ++++.......+.|+++.+.
T Consensus        93 ~~i~~~D~~-------~~l~~~~~~~~~fDlIflDP  121 (182)
T d2fhpa1          93 FEVRKMDAN-------RALEQFYEEKLQFDLVLLDP  121 (182)
T ss_dssp             EEEEESCHH-------HHHHHHHHTTCCEEEEEECC
T ss_pred             cccccccch-------hhhhhhcccCCCcceEEech
Confidence            778888876       23444444445799998665

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=84.73  E-value=0.42  Score=42.05  Aligned_cols=34  Identities=21%  Similarity=0.267  Sum_probs=28.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      +|+|+|.||+ -=|+..|..|+++|++|+++.++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5889999864 558899999999999999998753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=84.61  E-value=0.63  Score=40.98  Aligned_cols=76  Identities=11%  Similarity=0.048  Sum_probs=57.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      ...+++||=.|++.|.   ++..|+++|.+|+.++.+++-++.+.+.+...+                        .++.
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~------------------------~~v~   87 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG------------------------LKPR   87 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT------------------------CCCE
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccC------------------------ccce
Confidence            4556789999999885   788899999999999999998888777666543                        3567


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      ++..|+. +.+           ..++.|++++..+
T Consensus        88 ~~~~d~~-~~~-----------~~~~fD~i~~~~~  110 (246)
T d1y8ca_          88 LACQDIS-NLN-----------INRKFDLITCCLD  110 (246)
T ss_dssp             EECCCGG-GCC-----------CSCCEEEEEECTT
T ss_pred             eeccchh-hhc-----------ccccccccceeee
Confidence            7888887 421           1247898886544

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.49  E-value=2  Score=33.43  Aligned_cols=33  Identities=33%  Similarity=0.448  Sum_probs=28.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      +.++|.|| |-||.++|..|++.|.+|.++.++.
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            67888874 6999999999999999999988753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=84.44  E-value=0.7  Score=40.06  Aligned_cols=33  Identities=36%  Similarity=0.448  Sum_probs=28.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      |.|+|.|| |-.|+++|..|+++|++|++++|+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            46888875 5779999999999999999999863

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.16  E-value=0.54  Score=37.08  Aligned_cols=34  Identities=29%  Similarity=0.434  Sum_probs=29.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      +|.++|.| +|-+|.++|..|++.|.+|.++.|+.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            46777776 56999999999999999999998864

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.65  E-value=2.3  Score=35.87  Aligned_cols=75  Identities=12%  Similarity=0.076  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .++.||=.|++.|.   .+..|+++|++|+.++.++..++.+.+.....+-                       ..+.+.
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~-----------------------~~~~~~   83 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGL-----------------------DNLQTD   83 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----------------------TTEEEE
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccc-----------------------cchhhh
Confidence            45589999997663   5678889999999999999988887766655432                       346777


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      ..|+. +..           --+..|+++.+.-
T Consensus        84 ~~d~~-~~~-----------~~~~fD~I~~~~~  104 (198)
T d2i6ga1          84 LVDLN-TLT-----------FDGEYDFILSTVV  104 (198)
T ss_dssp             ECCTT-TCC-----------CCCCEEEEEEESC
T ss_pred             heecc-ccc-----------ccccccEEEEeee
Confidence            78877 321           0146898887654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=83.63  E-value=0.57  Score=38.35  Aligned_cols=37  Identities=14%  Similarity=0.169  Sum_probs=29.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHH
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQA  138 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~  138 (475)
                      +-|. |.|-+|.++|+.|+++|++|++.+++.++....
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            4455 469999999999999999999998876655443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=83.57  E-value=0.73  Score=39.25  Aligned_cols=36  Identities=28%  Similarity=0.254  Sum_probs=32.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      +.||++.|.|.+ .||+.+|+.+..-|++|+.++|+.
T Consensus        40 l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          40 IQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccCceEEEeccc-cccccceeeeeccccccccccccc
Confidence            679999999965 599999999999999999999874

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.50  E-value=0.26  Score=49.54  Aligned_cols=52  Identities=12%  Similarity=0.199  Sum_probs=39.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC-------------------hhHHHHHHHHHHHhCCC
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARD-------------------EKKLLQAQEEIKKACPN  148 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~-------------------~~~l~~~~~~l~~~~~~  148 (475)
                      +.+.+|+|.|+ ||+|.++++.|+..|. +++++|.+                   ..+.+.+++.|.+..+.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~   94 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSD   94 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTT
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCC
Confidence            45678999986 7999999999999997 78888753                   23456666667766554

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.50  E-value=1.5  Score=33.88  Aligned_cols=32  Identities=34%  Similarity=0.445  Sum_probs=27.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      |.++|.| +|-+|.++|..|++.|++|.++.+.
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~   53 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEAR   53 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeee
Confidence            5677775 5799999999999999999999875

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.43  E-value=1.8  Score=36.76  Aligned_cols=75  Identities=15%  Similarity=0.071  Sum_probs=55.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +.+||=.|+++|.   ++..|++.|++|+.++.+++.++.+.+.+...+                        ..+.++.
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~------------------------~~~~~~~   90 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE------------------------SNVEFIV   90 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------------------CCCEEEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc------------------------ccccccc
Confidence            4578999999886   667888999999999999998888877766554                        2355677


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      .|.. +..          ...+..|+++.+..+
T Consensus        91 ~d~~-~l~----------~~~~~fD~I~~~~~l  112 (226)
T d1ve3a1          91 GDAR-KLS----------FEDKTFDYVIFIDSI  112 (226)
T ss_dssp             CCTT-SCC----------SCTTCEEEEEEESCG
T ss_pred             cccc-ccc----------ccCcCceEEEEecch
Confidence            7776 421          112478998877543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=83.38  E-value=1.3  Score=38.99  Aligned_cols=75  Identities=17%  Similarity=0.003  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      .|.+||-.|+++|--   +..|++.+.+|+.++++++..+.+.+.+.. .                        .++.++
T Consensus        70 ~g~~VLdIG~GsGy~---ta~La~l~~~V~aiE~~~~~~~~A~~~~~~-~------------------------~nv~~~  121 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYY---TALIAEIVDKVVSVEINEKMYNYASKLLSY-Y------------------------NNIKLI  121 (224)
T ss_dssp             TTCEEEEECCTTSHH---HHHHHHHSSEEEEEESCHHHHHHHHHHHTT-C------------------------SSEEEE
T ss_pred             ccceEEEecCCCCHH---HHHHHHHhcccccccccHHHHHHHHHHHhc-c------------------------cccccc
Confidence            466899999988843   345666778999999998877766554332 1                        467788


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEcccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGM  210 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~  210 (475)
                      ..|.. ..          ....++.|.++.+++.
T Consensus       122 ~~d~~-~g----------~~~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         122 LGDGT-LG----------YEEEKPYDRVVVWATA  144 (224)
T ss_dssp             ESCGG-GC----------CGGGCCEEEEEESSBB
T ss_pred             cCchh-hc----------chhhhhHHHHHhhcch
Confidence            88876 20          1123689999988874

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.24  E-value=1.4  Score=35.96  Aligned_cols=88  Identities=14%  Similarity=0.101  Sum_probs=52.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEEeec
Q psy3252         101 LSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVSLDI  180 (475)
Q Consensus       101 vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  180 (475)
                      +-+.| -|-+|..+|++|++.|+.| +..|+.++.++..++.........                 .. .....+-..+
T Consensus         3 Ig~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-~~~~~~i~~~   62 (156)
T d2cvza2           3 VAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLE-----------------RV-AEARVIFTCL   62 (156)
T ss_dssp             EEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGG-----------------GG-GGCSEEEECC
T ss_pred             EEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccc-----------------cc-cceeEEEecc
Confidence            44555 4889999999999988755 678887777666554322110000                 00 1122233445


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEccc
Q psy3252         181 SKDYENIRSALQPAMDRCGPVYMLVNCAG  209 (475)
Q Consensus       181 t~d~~~v~~~~~~i~~~~g~IDvLVnnAG  209 (475)
                      . +.+.+....+.+.....+-.++|.+.-
T Consensus        63 ~-~~~~v~~~~~~l~~~~~~~~~iid~sT   90 (156)
T d2cvza2          63 P-TTREVYEVAEALYPYLREGTYWVDATS   90 (156)
T ss_dssp             S-SHHHHHHHHHHHTTTCCTTEEEEECSC
T ss_pred             c-chhhhhhhhcccccccccccccccccc
Confidence            5 567777777777666555566665553

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.14  E-value=1.7  Score=40.03  Aligned_cols=76  Identities=17%  Similarity=0.114  Sum_probs=51.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEE
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIE  174 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  174 (475)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.+...+-                      ..++.
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~----------------------~~~v~   85 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKL----------------------DHVVT   85 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTC----------------------TTTEE
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCC----------------------ccccc
Confidence            468999999999885   5667888897 7999998754 4444443433321                      15688


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         175 YVSLDISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       175 ~~~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                      ++..|+. +.+          ....++|+++..-
T Consensus        86 ~~~~~~~-~~~----------~~~~~~D~ivs~~  108 (316)
T d1oria_          86 IIKGKVE-EVE----------LPVEKVDIIISEW  108 (316)
T ss_dssp             EEESCTT-TCC----------CSSSCEEEEEECC
T ss_pred             eEeccHH-Hcc----------cccceeEEEeeee
Confidence            8888887 532          1124789988753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=82.77  E-value=0.79  Score=35.71  Aligned_cols=35  Identities=20%  Similarity=0.238  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      .+|.++|.| +|-||.++|..|++.|.+|.++.|..
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            468888877 56999999999999999999998864

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.64  E-value=1.5  Score=38.42  Aligned_cols=86  Identities=13%  Similarity=-0.008  Sum_probs=61.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEE
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYV  176 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  176 (475)
                      +|.+||-.|+++|--.++.-+++....+|+.++++++-++.+.+.+.+......                  ....+.+.
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~------------------~~~~~~~~  137 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL------------------SSGRVQLV  137 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH------------------HTSSEEEE
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccc------------------cccceEEE
Confidence            577999999999988888777887788999999999988888887766442100                  00356677


Q ss_pred             EeecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         177 SLDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       177 ~~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      ..|.. +.          ....++.|.++.+++..
T Consensus       138 ~gD~~-~~----------~~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         138 VGDGR-MG----------YAEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             ESCGG-GC----------CGGGCCEEEEEECSBBS
T ss_pred             Eeecc-cc----------cchhhhhhhhhhhcchh
Confidence            77765 21          11235799999888753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=82.49  E-value=1.4  Score=34.68  Aligned_cols=33  Identities=27%  Similarity=0.311  Sum_probs=28.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      |.++|.| +|-||.++|..|.+.|.+|.++.|+.
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            5788887 46999999999999999999998854

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.33  E-value=0.57  Score=39.28  Aligned_cols=34  Identities=21%  Similarity=0.288  Sum_probs=28.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCh
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGA-HVTIVARDE  132 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga-~Vvl~~R~~  132 (475)
                      +|+|+|.|| |-.|+..|..|+++|+ .|+++.|+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            577888885 5889999999999999 499998864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.15  E-value=1.1  Score=38.01  Aligned_cols=40  Identities=28%  Similarity=0.165  Sum_probs=34.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK  134 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~  134 (475)
                      ..+.||++.|.| .|.||+++|+.+..-|.+|+..++....
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            456789999888 6899999999999999999999987544

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.84  E-value=7.7  Score=31.64  Aligned_cols=39  Identities=21%  Similarity=0.163  Sum_probs=23.8

Q ss_pred             EEEecCCChHHHHHHHH-HHH-c----CCEEEEEecChhHHHHHHH
Q psy3252         101 LSVTGGSSGIGKHVAIE-AAK-R----GAHVTIVARDEKKLLQAQE  140 (475)
Q Consensus       101 vLITGas~GIG~aiA~~-La~-~----Ga~Vvl~~R~~~~l~~~~~  140 (475)
                      +.|.||++ +|...+-. |+. .    +..|++.|.++++++...+
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d   47 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD   47 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHH
Confidence            56777743 45444322 221 1    3589999999998875443

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=81.81  E-value=2.2  Score=36.51  Aligned_cols=77  Identities=17%  Similarity=0.030  Sum_probs=55.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      +++||=.|++.|+-   +..|++.|++|+.++-+++-++.+.+.+...+.                       .++.++.
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~-----------------------~~i~~~~   69 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH-----------------------QQVEYVQ   69 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC-----------------------CSEEEEE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccc-----------------------ccccccc
Confidence            57899999988843   466788999999999999888877666655432                       4678888


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEccccc
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCAGMA  211 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnAG~~  211 (475)
                      +|.. +.. .         ..+..|+++.+..+.
T Consensus        70 ~d~~-~l~-~---------~~~~fD~v~~~~~l~   92 (231)
T d1vl5a_          70 GDAE-QMP-F---------TDERFHIVTCRIAAH   92 (231)
T ss_dssp             CCC--CCC-S---------CTTCEEEEEEESCGG
T ss_pred             cccc-ccc-c---------ccccccccccccccc
Confidence            8887 521 0         124799998877654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=81.62  E-value=0.78  Score=39.02  Aligned_cols=36  Identities=33%  Similarity=0.443  Sum_probs=31.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          96 PTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        96 l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      .+.|.|+|.|| |--|++.|..|+++|++|+++.++.
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            34688999985 5779999999999999999999875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=81.50  E-value=1.4  Score=36.70  Aligned_cols=40  Identities=23%  Similarity=0.209  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhH
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKK  134 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~  134 (475)
                      .-+.||+++|.|- |-+|+.+|++|...|++|+++..++-.
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            4578999999985 589999999999999999999999744

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.33  E-value=1.7  Score=34.06  Aligned_cols=32  Identities=31%  Similarity=0.292  Sum_probs=27.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q psy3252          99 GTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARD  131 (475)
Q Consensus        99 k~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~  131 (475)
                      +.++|.| +|-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            3566776 5699999999999999999998876

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=81.20  E-value=0.8  Score=41.27  Aligned_cols=35  Identities=17%  Similarity=0.178  Sum_probs=31.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEe
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVA  129 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~  129 (475)
                      .+++||+++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            478999999998 78999999999999999988654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=81.04  E-value=0.45  Score=40.19  Aligned_cols=44  Identities=23%  Similarity=0.300  Sum_probs=28.3

Q ss_pred             EEEEecCCChHHH--HHHHHHHHc----CCEEEEEecChhHHHHHHHHHHH
Q psy3252         100 TLSVTGGSSGIGK--HVAIEAAKR----GAHVTIVARDEKKLLQAQEEIKK  144 (475)
Q Consensus       100 ~vLITGas~GIG~--aiA~~La~~----Ga~Vvl~~R~~~~l~~~~~~l~~  144 (475)
                      .+.|.|| |.+|.  ++...|+..    +.+|+++|.++++++.....+..
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~   53 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKK   53 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHH
Confidence            4566775 44554  444445543    45899999999988765554443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=80.83  E-value=1  Score=36.04  Aligned_cols=35  Identities=34%  Similarity=0.435  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          97 TNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        97 ~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      .+|+++|.| +|-+|.++|..|.+.|.+|.++.+..
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            467888886 56999999999999999999998864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=80.82  E-value=0.74  Score=39.79  Aligned_cols=37  Identities=22%  Similarity=0.132  Sum_probs=32.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecCh
Q psy3252          95 APTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDE  132 (475)
Q Consensus        95 ~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~  132 (475)
                      ++.||++.|.| .|.||+.+|+.|..-|++|+..++..
T Consensus        42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            56789999998 56899999999999999999999864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=80.69  E-value=0.97  Score=38.85  Aligned_cols=39  Identities=23%  Similarity=0.232  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChh
Q psy3252          94 LAPTNGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEK  133 (475)
Q Consensus        94 ~~l~gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~  133 (475)
                      ..+.||++.|.| -|.||+.+|+.+..-|++|+..++...
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            457899999996 679999999999999999999998643

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.35  E-value=3.9  Score=33.89  Aligned_cols=34  Identities=24%  Similarity=0.160  Sum_probs=23.3

Q ss_pred             EEEecC-CChHHHHHHHHHHHcC----CEEEEEecChhH
Q psy3252         101 LSVTGG-SSGIGKHVAIEAAKRG----AHVTIVARDEKK  134 (475)
Q Consensus       101 vLITGa-s~GIG~aiA~~La~~G----a~Vvl~~R~~~~  134 (475)
                      +.|.|| |.|.+..++..+....    .+++++|.+++.
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            556665 6677777766665432    389999998754

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=80.06  E-value=5  Score=30.85  Aligned_cols=82  Identities=20%  Similarity=0.128  Sum_probs=54.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCEEEEEecChhHHHHHHHHHHHhCCCCcchhhhhHHHhhhcCCCCCccceEEEEE
Q psy3252          98 NGTLSVTGGSSGIGKHVAIEAAKRGAHVTIVARDEKKLLQAQEEIKKACPNPKFIRFIEYEEIKKACPNPKFIRFIEYVS  177 (475)
Q Consensus        98 gk~vLITGas~GIG~aiA~~La~~Ga~Vvl~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  177 (475)
                      ||+|||.=-..-+-..+...|-+.|++|+..+.+...   +.+.+.+..+                        .  .+-
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~~~------------------------d--lii   51 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKELKP------------------------D--IVT   51 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHCC------------------------S--EEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhccC------------------------C--EEE
Confidence            7899999999999999999999999999866665433   2333333322                        2  345


Q ss_pred             eecCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q psy3252         178 LDISKDYENIRSALQPAMDRCGPVYMLVNCA  208 (475)
Q Consensus       178 ~Dvt~d~~~v~~~~~~i~~~~g~IDvLVnnA  208 (475)
                      +|+.-...+--++++++.+....+-+++..+
T Consensus        52 lD~~mp~~~G~e~~~~ir~~~~~~pvi~ls~   82 (118)
T d1u0sy_          52 MDITMPEMNGIDAIKEIMKIDPNAKIIVCSA   82 (118)
T ss_dssp             EECSCGGGCHHHHHHHHHHHCTTCCEEEEEC
T ss_pred             EecCCCCCCHHHHHHHHHHhCCCCcEEEEEc
Confidence            5554212234456777777777777776653